View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9377_low_17 (Length: 367)

Name: NF9377_low_17
Description: NF9377
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9377_low_17
NF9377_low_17
[»] chr3 (71 HSPs)
chr3 (98-268)||(51980734-51980917)
chr3 (184-268)||(42528069-42528153)
chr3 (178-273)||(32999664-32999759)
chr3 (184-276)||(6124705-6124797)
chr3 (107-271)||(25999092-25999269)
chr3 (178-268)||(12764673-12764763)
chr3 (178-268)||(19274732-19274822)
chr3 (178-271)||(8879363-8879456)
chr3 (178-268)||(8321438-8321528)
chr3 (178-268)||(34435982-34436072)
chr3 (178-268)||(41991691-41991781)
chr3 (12-62)||(51980953-51981003)
chr3 (211-268)||(12122921-12122978)
chr3 (211-268)||(32111600-32111657)
chr3 (178-270)||(54463463-54463555)
chr3 (178-268)||(51760473-51760563)
chr3 (178-268)||(52184834-52184924)
chr3 (178-268)||(52959294-52959384)
chr3 (211-268)||(40374548-40374605)
chr3 (211-268)||(48747406-48747463)
chr3 (184-268)||(17666804-17666888)
chr3 (211-271)||(36660176-36660236)
chr3 (211-275)||(50938277-50938341)
chr3 (185-268)||(4070818-4070901)
chr3 (178-268)||(9558867-9558957)
chr3 (178-268)||(12055522-12055612)
chr3 (184-266)||(35405543-35405625)
chr3 (107-164)||(42527978-42528036)
chr3 (211-268)||(5505934-5505991)
chr3 (211-268)||(6586267-6586324)
chr3 (211-268)||(41889461-41889518)
chr3 (211-268)||(42167372-42167429)
chr3 (211-268)||(46114990-46115047)
chr3 (211-268)||(46668343-46668400)
chr3 (184-268)||(30317957-30318041)
chr3 (211-255)||(32390154-32390198)
chr3 (184-268)||(48050996-48051080)
chr3 (211-266)||(22978083-22978138)
chr3 (211-266)||(36806926-36806981)
chr3 (178-268)||(2557909-2557999)
chr3 (178-268)||(17666617-17666707)
chr3 (178-268)||(45356425-45356515)
chr3 (211-268)||(7041732-7041789)
chr3 (106-162)||(34435896-34435953)
chr3 (211-268)||(34785918-34785975)
chr3 (215-268)||(39129376-39129429)
chr3 (211-268)||(41888811-41888868)
chr3 (106-162)||(41991605-41991662)
chr3 (178-243)||(42293004-42293069)
chr3 (211-268)||(43860728-43860785)
chr3 (211-268)||(50935715-50935772)
chr3 (106-162)||(54463377-54463434)
chr3 (184-251)||(43968365-43968432)
chr3 (202-268)||(1361673-1361739)
chr3 (178-268)||(12122181-12122271)
chr3 (105-162)||(12764792-12764850)
chr3 (178-268)||(30743021-30743111)
chr3 (218-268)||(45355132-45355182)
chr3 (178-268)||(51062912-51063002)
chr3 (110-158)||(6124836-6124885)
chr3 (106-162)||(8321352-8321409)
chr3 (231-268)||(13353418-13353455)
chr3 (211-268)||(40980180-40980237)
chr3 (211-268)||(42877242-42877299)
chr3 (211-268)||(48071978-48072035)
chr3 (239-268)||(49918257-49918286)
chr3 (105-165)||(50938155-50938216)
chr3 (106-162)||(51063031-51063088)
chr3 (106-162)||(52184748-52184805)
chr3 (197-253)||(10809525-10809581)
chr3 (211-275)||(39129295-39129359)
[»] chr4 (72 HSPs)
chr4 (98-268)||(53431632-53431816)
chr4 (178-268)||(30653298-30653388)
chr4 (195-279)||(55496061-55496145)
chr4 (185-268)||(40674749-40674833)
chr4 (185-268)||(24152678-24152761)
chr4 (98-165)||(55495102-55495170)
chr4 (178-268)||(6238190-6238280)
chr4 (184-268)||(6287839-6287923)
chr4 (14-62)||(55495018-55495066)
chr4 (178-268)||(19801870-19801960)
chr4 (178-268)||(33984090-33984180)
chr4 (178-268)||(39840202-39840292)
chr4 (178-268)||(53284009-53284099)
chr4 (211-268)||(19912675-19912732)
chr4 (211-268)||(30411292-30411349)
chr4 (184-268)||(55001757-55001841)
chr4 (178-273)||(43374592-43374687)
chr4 (178-257)||(47633851-47633930)
chr4 (178-268)||(25686988-25687078)
chr4 (215-276)||(7113559-7113620)
chr4 (211-264)||(38005551-38005604)
chr4 (211-268)||(45549655-45549712)
chr4 (184-268)||(37114447-37114531)
chr4 (184-268)||(37498205-37498289)
chr4 (184-268)||(51941105-51941189)
chr4 (213-268)||(202292-202347)
chr4 (213-268)||(1771882-1771937)
chr4 (178-268)||(19800927-19801018)
chr4 (185-268)||(49335205-49335288)
chr4 (178-268)||(2943659-2943748)
chr4 (178-268)||(44448449-44448539)
chr4 (178-268)||(54683599-54683689)
chr4 (211-268)||(27531832-27531889)
chr4 (211-268)||(51924028-51924085)
chr4 (211-268)||(55610665-55610722)
chr4 (212-268)||(14269864-14269920)
chr4 (184-268)||(40685785-40685864)
chr4 (211-271)||(49646024-49646084)
chr4 (211-267)||(49648860-49648916)
chr4 (211-275)||(50790819-50790883)
chr4 (229-268)||(7141180-7141219)
chr4 (201-268)||(45561346-45561412)
chr4 (105-162)||(25687107-25687165)
chr4 (178-268)||(44525945-44526035)
chr4 (211-268)||(2390310-2390367)
chr4 (106-162)||(6238309-6238366)
chr4 (117-165)||(7141075-7141124)
chr4 (106-162)||(19801784-19801841)
chr4 (211-268)||(28459614-28459671)
chr4 (211-268)||(30653501-30653557)
chr4 (106-162)||(37114355-37114412)
chr4 (211-268)||(43590536-43590593)
chr4 (106-162)||(47633765-47633822)
chr4 (211-268)||(48953032-48953089)
chr4 (106-162)||(49335112-49335169)
chr4 (211-268)||(50792456-50792513)
chr4 (110-162)||(55001669-55001722)
chr4 (211-268)||(55660548-55660605)
chr4 (211-275)||(7113629-7113693)
chr4 (211-275)||(19871013-19871077)
chr4 (105-162)||(6287958-6288016)
chr4 (211-268)||(10658923-10658980)
chr4 (211-268)||(10873068-10873125)
chr4 (211-268)||(19869962-19870019)
chr4 (188-268)||(20356718-20356799)
chr4 (211-268)||(31997834-31997891)
chr4 (106-162)||(32012668-32012725)
chr4 (107-152)||(40685910-40685955)
chr4 (106-158)||(44448572-44448625)
chr4 (106-162)||(53284128-53284185)
chr4 (228-268)||(318451-318491)
chr4 (211-271)||(31624438-31624498)
[»] chr8 (56 HSPs)
chr8 (98-268)||(2773496-2773680)
chr8 (106-268)||(39733728-39733891)
chr8 (184-268)||(3512473-3512557)
chr8 (178-268)||(20697513-20697603)
chr8 (178-268)||(22215113-22215203)
chr8 (194-274)||(34903401-34903481)
chr8 (178-268)||(24804494-24804584)
chr8 (178-268)||(43800776-43800866)
chr8 (211-268)||(4477659-4477716)
chr8 (211-268)||(12208808-12208865)
chr8 (211-268)||(12453236-12453293)
chr8 (211-268)||(18146344-18146401)
chr8 (211-268)||(43150254-43150311)
chr8 (211-268)||(45069859-45069916)
chr8 (184-268)||(16786544-16786628)
chr8 (197-268)||(25099415-25099486)
chr8 (178-268)||(284820-284910)
chr8 (178-268)||(630967-631057)
chr8 (178-268)||(816779-816869)
chr8 (212-268)||(45237834-45237890)
chr8 (202-268)||(5838258-5838324)
chr8 (178-268)||(25100222-25100312)
chr8 (178-268)||(35057308-35057398)
chr8 (178-268)||(35160277-35160367)
chr8 (184-254)||(36859244-36859314)
chr8 (202-268)||(40529503-40529569)
chr8 (106-162)||(25100136-25100193)
chr8 (211-268)||(31642789-31642846)
chr8 (106-162)||(35397940-35397997)
chr8 (211-268)||(38364511-38364568)
chr8 (184-268)||(5574604-5574688)
chr8 (201-268)||(38746987-38747055)
chr8 (211-261)||(35019496-35019546)
chr8 (211-273)||(39104218-39104280)
chr8 (106-162)||(5574723-5574780)
chr8 (106-162)||(17121936-17121993)
chr8 (106-162)||(20697427-20697484)
chr8 (178-271)||(21266871-21266964)
chr8 (106-162)||(25100367-25100424)
chr8 (106-162)||(35160191-35160248)
chr8 (211-268)||(35253070-35253127)
chr8 (106-162)||(38746878-38746935)
chr8 (106-162)||(40529622-40529679)
chr8 (184-257)||(41355624-41355697)
chr8 (211-256)||(41356304-41356349)
chr8 (106-162)||(43800690-43800747)
chr8 (211-268)||(43873960-43874017)
chr8 (211-275)||(43129585-43129649)
chr8 (202-268)||(14911767-14911833)
chr8 (105-162)||(16786451-16786509)
chr8 (228-266)||(41789232-41789270)
chr8 (106-162)||(5838377-5838434)
chr8 (106-162)||(14911886-14911943)
chr8 (211-268)||(38760850-38760907)
chr8 (211-268)||(42353730-42353787)
chr8 (211-247)||(29725764-29725800)
[»] chr1 (64 HSPs)
chr1 (178-268)||(41865289-41865379)
chr1 (178-268)||(2459653-2459743)
chr1 (178-268)||(38058751-38058841)
chr1 (178-268)||(44277972-44278062)
chr1 (178-267)||(46742459-46742548)
chr1 (184-268)||(12014644-12014728)
chr1 (178-268)||(27747609-27747699)
chr1 (178-268)||(30358076-30358166)
chr1 (178-268)||(39325613-39325703)
chr1 (178-268)||(50586186-50586276)
chr1 (211-268)||(3796004-3796061)
chr1 (211-268)||(5698128-5698185)
chr1 (211-268)||(14390424-14390481)
chr1 (100-164)||(28343808-28343873)
chr1 (211-270)||(4361100-4361159)
chr1 (178-268)||(11332844-11332934)
chr1 (178-268)||(11490865-11490955)
chr1 (178-268)||(28955562-28955652)
chr1 (178-268)||(36739555-36739645)
chr1 (211-268)||(5698510-5698567)
chr1 (202-266)||(38815580-38815644)
chr1 (184-268)||(45900171-45900255)
chr1 (184-268)||(47326597-47326681)
chr1 (107-165)||(2459568-2459627)
chr1 (201-268)||(11823586-11823653)
chr1 (98-159)||(31656301-31656362)
chr1 (178-268)||(31657107-31657197)
chr1 (211-268)||(4640133-4640190)
chr1 (211-268)||(9223842-9223899)
chr1 (211-268)||(23259087-23259144)
chr1 (211-268)||(29092604-29092661)
chr1 (219-268)||(30899470-30899519)
chr1 (211-268)||(31656371-31656428)
chr1 (211-268)||(35179822-35179879)
chr1 (184-268)||(1190156-1190240)
chr1 (184-268)||(25365762-25365846)
chr1 (110-165)||(38058867-38058923)
chr1 (178-254)||(46315695-46315771)
chr1 (213-268)||(42628260-42628315)
chr1 (211-266)||(44299984-44300039)
chr1 (178-272)||(9423062-9423156)
chr1 (107-164)||(11332961-11333019)
chr1 (107-164)||(11490982-11491040)
chr1 (211-261)||(44109972-44110022)
chr1 (106-162)||(11823705-11823762)
chr1 (106-162)||(27747728-27747785)
chr1 (106-162)||(28314775-28314832)
chr1 (106-162)||(28955476-28955533)
chr1 (106-162)||(30358195-30358252)
chr1 (106-162)||(47326505-47326562)
chr1 (106-162)||(50586100-50586157)
chr1 (107-162)||(25365881-25365937)
chr1 (107-162)||(33076725-33076781)
chr1 (211-259)||(39325557-39325605)
chr1 (105-162)||(41865408-41865466)
chr1 (105-165)||(4638510-4638571)
chr1 (106-162)||(12014763-12014820)
chr1 (211-268)||(27667677-27667734)
chr1 (211-268)||(31496612-31496669)
chr1 (106-162)||(39325732-39325789)
chr1 (215-275)||(11756916-11756976)
chr1 (184-268)||(28343692-28343775)
chr1 (236-268)||(38667189-38667221)
chr1 (106-150)||(45900303-45900347)
[»] chr7 (78 HSPs)
chr7 (184-273)||(46350849-46350938)
chr7 (98-274)||(981333-981523)
chr7 (184-268)||(6476928-6477012)
chr7 (184-268)||(46534410-46534494)
chr7 (178-268)||(21920803-21920893)
chr7 (178-268)||(46349891-46349981)
chr7 (185-268)||(43158206-43158290)
chr7 (178-268)||(3370451-3370541)
chr7 (184-266)||(14792130-14792212)
chr7 (178-268)||(27826711-27826801)
chr7 (178-268)||(28494283-28494373)
chr7 (178-268)||(42329030-42329120)
chr7 (178-268)||(42997516-42997606)
chr7 (211-268)||(30582673-30582730)
chr7 (211-268)||(35670394-35670451)
chr7 (211-268)||(37658155-37658212)
chr7 (211-268)||(40061165-40061222)
chr7 (184-268)||(42265286-42265370)
chr7 (184-268)||(48935237-48935321)
chr7 (178-268)||(4060354-4060444)
chr7 (178-268)||(6243869-6243959)
chr7 (178-268)||(28958129-28958219)
chr7 (178-268)||(31226878-31226968)
chr7 (178-268)||(35647418-35647508)
chr7 (202-268)||(43156570-43156636)
chr7 (211-268)||(9806629-9806686)
chr7 (211-268)||(31969506-31969563)
chr7 (211-268)||(35747027-35747084)
chr7 (215-268)||(44570934-44570987)
chr7 (213-268)||(42329597-42329652)
chr7 (178-268)||(25696035-25696125)
chr7 (178-268)||(28235287-28235377)
chr7 (184-266)||(30523967-30524049)
chr7 (178-268)||(46536124-46536214)
chr7 (178-268)||(46672508-46672598)
chr7 (98-162)||(42997635-42997700)
chr7 (201-273)||(43337630-43337702)
chr7 (211-266)||(39870061-39870116)
chr7 (178-268)||(31031901-31031991)
chr7 (211-268)||(1602166-1602223)
chr7 (211-268)||(8932540-8932597)
chr7 (106-162)||(27826830-27826887)
chr7 (106-162)||(28958043-28958100)
chr7 (211-268)||(30999384-30999441)
chr7 (211-268)||(31436287-31436344)
chr7 (211-260)||(31619515-31619564)
chr7 (106-162)||(35647537-35647594)
chr7 (211-268)||(36121433-36121490)
chr7 (106-162)||(42328085-42328142)
chr7 (227-268)||(42826002-42826043)
chr7 (211-268)||(43544936-43544993)
chr7 (212-273)||(44104617-44104678)
chr7 (106-162)||(46536243-46536300)
chr7 (22-62)||(44103886-44103926)
chr7 (107-150)||(30523876-30523919)
chr7 (211-270)||(31030804-31030863)
chr7 (201-276)||(46615709-46615784)
chr7 (105-162)||(3370570-3370628)
chr7 (178-268)||(29994223-29994313)
chr7 (105-162)||(46349804-46349862)
chr7 (106-159)||(46350757-46350811)
chr7 (215-268)||(1602024-1602076)
chr7 (106-162)||(4060473-4060530)
chr7 (106-162)||(28494197-28494254)
chr7 (106-162)||(29994137-29994194)
chr7 (106-162)||(31031815-31031872)
chr7 (106-162)||(31226792-31226849)
chr7 (105-165)||(33979734-33979795)
chr7 (211-268)||(33982355-33982412)
chr7 (211-268)||(41406190-41406247)
chr7 (207-268)||(42328221-42328282)
chr7 (106-162)||(42328944-42329001)
chr7 (211-268)||(42825857-42825914)
chr7 (106-162)||(43337754-43337811)
chr7 (211-268)||(44818723-44818780)
chr7 (106-162)||(46672627-46672684)
chr7 (211-267)||(33979619-33979675)
chr7 (98-165)||(44103782-44103850)
[»] chr5 (66 HSPs)
chr5 (178-273)||(7157505-7157600)
chr5 (194-268)||(36959468-36959542)
chr5 (178-268)||(6789621-6789711)
chr5 (178-268)||(27813008-27813098)
chr5 (178-268)||(34589933-34590023)
chr5 (178-268)||(35766561-35766651)
chr5 (196-268)||(36944265-36944337)
chr5 (182-268)||(5050113-5050199)
chr5 (178-268)||(13359488-13359578)
chr5 (178-268)||(15498647-15498737)
chr5 (178-268)||(16218315-16218405)
chr5 (178-268)||(24171367-24171457)
chr5 (178-268)||(29525328-29525418)
chr5 (178-268)||(37530752-37530842)
chr5 (178-268)||(41734276-41734366)
chr5 (178-268)||(42709313-42709403)
chr5 (213-268)||(1923949-1924004)
chr5 (107-268)||(2890896-2891071)
chr5 (178-268)||(7615009-7615099)
chr5 (178-268)||(10815065-10815155)
chr5 (178-268)||(12280783-12280873)
chr5 (178-268)||(36761064-36761154)
chr5 (12-62)||(36959717-36959767)
chr5 (211-268)||(3078581-3078638)
chr5 (211-268)||(11575624-11575681)
chr5 (212-268)||(4559521-4559577)
chr5 (184-268)||(5102716-5102800)
chr5 (98-165)||(36959613-36959681)
chr5 (202-273)||(11784224-11784295)
chr5 (178-268)||(76416-76506)
chr5 (178-268)||(17645308-17645398)
chr5 (106-162)||(76535-76592)
chr5 (215-268)||(3033395-3033448)
chr5 (211-268)||(13018996-13019053)
chr5 (106-162)||(41734190-41734247)
chr5 (211-267)||(20017346-20017402)
chr5 (184-268)||(25881509-25881593)
chr5 (184-251)||(17540280-17540347)
chr5 (178-268)||(23590641-23590731)
chr5 (211-268)||(8520499-8520556)
chr5 (106-162)||(10815184-10815241)
chr5 (201-266)||(12939912-12939977)
chr5 (201-266)||(12953862-12953927)
chr5 (106-162)||(15498766-15498823)
chr5 (211-268)||(20768908-20768965)
chr5 (106-162)||(27812922-27812979)
chr5 (106-162)||(29525242-29525299)
chr5 (106-162)||(36761183-36761240)
chr5 (106-162)||(37530666-37530723)
chr5 (106-162)||(42709432-42709489)
chr5 (184-268)||(24463519-24463603)
chr5 (201-268)||(42422809-42422876)
chr5 (202-268)||(35638766-35638832)
chr5 (106-152)||(35638896-35638942)
chr5 (106-162)||(6789535-6789592)
chr5 (106-158)||(7614923-7614976)
chr5 (215-268)||(8520569-8520622)
chr5 (106-162)||(12280902-12280959)
chr5 (106-162)||(12939803-12939860)
chr5 (106-162)||(12953753-12953810)
chr5 (106-162)||(13359402-13359459)
chr5 (106-162)||(23590760-23590817)
chr5 (106-162)||(24171486-24171543)
chr5 (106-162)||(34589847-34589904)
chr5 (106-162)||(42422930-42422987)
chr5 (184-268)||(3703454-3703538)
[»] chr2 (58 HSPs)
chr2 (185-268)||(10361395-10361478)
chr2 (178-266)||(6432174-6432262)
chr2 (106-268)||(11017966-11018129)
chr2 (178-268)||(42097919-42098009)
chr2 (178-268)||(43568365-43568455)
chr2 (178-268)||(45376911-45377001)
chr2 (178-268)||(8875675-8875765)
chr2 (184-273)||(39241174-39241263)
chr2 (201-268)||(16496646-16496713)
chr2 (178-268)||(12160921-12161011)
chr2 (178-268)||(30523611-30523701)
chr2 (178-268)||(36936080-36936170)
chr2 (178-268)||(42519716-42519806)
chr2 (211-268)||(7183322-7183379)
chr2 (211-268)||(10247423-10247480)
chr2 (211-268)||(18109755-18109812)
chr2 (178-268)||(1876040-1876130)
chr2 (178-268)||(34245248-34245338)
chr2 (211-268)||(39532064-39532121)
chr2 (211-275)||(33178956-33179020)
chr2 (211-270)||(15265381-15265440)
chr2 (178-268)||(14958122-14958212)
chr2 (178-268)||(35422045-35422135)
chr2 (211-268)||(26340074-26340131)
chr2 (215-268)||(38928534-38928587)
chr2 (184-268)||(3147449-3147533)
chr2 (184-268)||(43496164-43496248)
chr2 (184-267)||(5774096-5774179)
chr2 (214-268)||(8341198-8341252)
chr2 (106-162)||(1875954-1876011)
chr2 (106-162)||(5774214-5774271)
chr2 (106-162)||(7454653-7454710)
chr2 (106-162)||(8875794-8875851)
chr2 (106-162)||(12160835-12160892)
chr2 (211-268)||(14452302-14452359)
chr2 (106-162)||(14958241-14958298)
chr2 (106-162)||(34245367-34245424)
chr2 (211-268)||(36600939-36600996)
chr2 (201-266)||(38324242-38324307)
chr2 (106-162)||(39241082-39241139)
chr2 (211-268)||(40862244-40862300)
chr2 (229-268)||(18239341-18239380)
chr2 (107-164)||(10361512-10361570)
chr2 (211-268)||(1086045-1086102)
chr2 (211-268)||(6319539-6319596)
chr2 (211-268)||(6322180-6322237)
chr2 (211-268)||(11447242-11447299)
chr2 (106-162)||(16496537-16496594)
chr2 (214-267)||(32482288-32482341)
chr2 (211-268)||(33182609-33182666)
chr2 (211-268)||(36602772-36602829)
chr2 (106-162)||(36935994-36936051)
chr2 (211-268)||(38245940-38245997)
chr2 (106-162)||(38324359-38324416)
chr2 (211-268)||(38928604-38928661)
chr2 (106-162)||(42519835-42519892)
chr2 (211-268)||(44526027-44526084)
chr2 (178-246)||(7454556-7454624)
[»] chr6 (32 HSPs)
chr6 (178-268)||(22707293-22707383)
chr6 (178-268)||(25023462-25023552)
chr6 (178-268)||(24119246-24119336)
chr6 (211-268)||(1789789-1789846)
chr6 (211-268)||(18368774-18368831)
chr6 (184-268)||(6834059-6834143)
chr6 (184-268)||(12130483-12130567)
chr6 (211-266)||(190927-190982)
chr6 (178-268)||(20645660-20645750)
chr6 (211-268)||(18801702-18801759)
chr6 (178-268)||(13756327-13756417)
chr6 (178-268)||(20992272-20992362)
chr6 (211-268)||(4976526-4976583)
chr6 (109-165)||(6833971-6834028)
chr6 (184-268)||(21860236-21860320)
chr6 (218-268)||(13866266-13866316)
chr6 (214-268)||(15508351-15508405)
chr6 (178-268)||(21459024-21459114)
chr6 (178-268)||(21778093-21778183)
chr6 (106-162)||(12130602-12130659)
chr6 (106-162)||(20645779-20645836)
chr6 (106-162)||(22707412-22707469)
chr6 (106-162)||(24119160-24119217)
chr6 (211-268)||(24159240-24159297)
chr6 (211-268)||(32562451-32562508)
chr6 (211-268)||(5090124-5090181)
chr6 (211-268)||(5956424-5956481)
chr6 (105-165)||(15508467-15508528)
chr6 (106-162)||(21778007-21778064)
chr6 (106-162)||(25023376-25023433)
chr6 (211-268)||(31603952-31604009)
chr6 (211-268)||(34574635-34574692)
[»] scaffold0115 (2 HSPs)
scaffold0115 (211-268)||(4151-4208)
scaffold0115 (211-268)||(11891-11948)
[»] scaffold1391 (2 HSPs)
scaffold1391 (184-268)||(1508-1592)
scaffold1391 (109-165)||(1420-1477)
[»] scaffold0076 (1 HSPs)
scaffold0076 (184-268)||(14204-14288)
[»] scaffold0060 (1 HSPs)
scaffold0060 (202-268)||(57880-57946)
[»] scaffold0325 (1 HSPs)
scaffold0325 (106-162)||(18497-18554)
[»] scaffold0009 (1 HSPs)
scaffold0009 (211-271)||(94444-94504)
[»] scaffold0007 (1 HSPs)
scaffold0007 (185-268)||(157629-157712)
[»] scaffold0039 (1 HSPs)
scaffold0039 (218-268)||(76246-76296)
[»] scaffold0330 (2 HSPs)
scaffold0330 (231-268)||(6993-7030)
scaffold0330 (106-162)||(7112-7169)


Alignment Details
Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 98 - 268
Target Start/End: Complemental strand, 51980917 - 51980734
Alignment:
Q  98 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctcnnnnnnnnctataagctcgt----------- 185  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||         ||||||||||||               
T  51980917 ggttattattggaagaaaatgtaaaaagctatcagctataagttaaaaagctacttgaaatagcttct-gaaaaaagctataagctcgtgaaaaaagctc 51980819  T
Q  186 --taccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
      ||||||| |||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||    
T  51980818 gttaccaaacacatcatgttttcatccaacaagcttataagctagtccaacaagctataaactaacttttttgtgttaccaaaca 51980734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 42528069 - 42528153
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| |||||| ||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||| ||||||    
T  42528069 gttaccaaacacatcacgttttcatccaacaagcttataagctagtccaacaagctataagctagcttttttgtgttatcaaaca 42528153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 273
Target Start/End: Original strand, 32999664 - 32999759
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtc 273  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| ||  ||||| ||||||||||||| ||||||||||||| |||||| ||||    
T  32999664 aagctcgttaccaaacacatcacgttttcatccaacaagcttataagctaatccaagaagctataagctagcttttttgtgttatcaaacacagtc 32999759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 6124797 - 6124705
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtcata 276  Q
    ||||||||| |||||| ||||||||| |||||||||||||  | |||||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  6124797 gttaccaaacacatcacgttttcatcaaacaagcttataagatagtccaacaagttataagctatcttttttgtgttatcaaacatagtcata 6124705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 107 - 271
Target Start/End: Original strand, 25999092 - 25999269
Alignment:
Q  107 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctcnnnnnnnnctataagctcgtta------------ccaaat 193  Q
    ||||||||||||| || |||||||||||||||| ||||||| || |||||||||||||||        |||||||||||| |            |||||     
T  25999092 tggaagaaaatgtgaaaagctatcagctataagttaaaaaggtacttgaaatagcttctcaaaaaaagctataagctcgtgagaaaagcttgttccaaac 25999191  T
Q  194 acatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatag 271  Q
    |||||| ||||||||||||||| |||||||| | || ||| |||||||||||||||||||||||||||||||||||||    
T  25999192 acatcacgttttcatccaacaaacttataaattagttcaataagctataagctaacttttttgtgttaccaaacatag 25999269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 12764763 - 12764673
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| |||||| ||||||||||| ||||||||||| ||  ||||| ||||||||| ||| ||||||||||||||||||||    
T  12764763 aagcttgttaccaaacacatcacgttttcatccagcaagcttataagctaatccaaaaagctataaactagcttttttgtgttaccaaaca 12764673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 19274822 - 19274732
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || |||  |||||||||||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  19274822 aagcttgttaccaaacacgtcacattttcatccaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 19274732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 271
Target Start/End: Complemental strand, 8879456 - 8879363
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatag 271  Q
    ||||| |||||||||||| ||| ||||||||| ||| | ||||||| ||  |||||||| |||||||||| |||||||||||||||||||||||    
T  8879456 aagcttgttaccaaatacgtcacgttttcatctaacgaacttataagctaatccaacaaactataagctagcttttttgtgttaccaaacatag 8879363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 8321438 - 8321528
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  8321438 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 8321528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 34435982 - 34436072
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  34435982 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 34436072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 41991691 - 41991781
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  41991691 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 41991781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 51981003 - 51980953
Alignment:
Q  12 cagagaagagaaaaacaaaacgtgagtgagtgggacggttgatttgtttac 62  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51981003 cagagaagagaaaaacaaaacgtgagtgagtgggacggttggtttgtttac 51980953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 12122921 - 12122978
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  12122921 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 12122978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 32111600 - 32111657
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  32111600 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 32111657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 270
Target Start/End: Original strand, 54463463 - 54463555
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacata 270  Q
    ||||| ||||||||| || ||| ||||||||| ||| |||||||||  |  |||||||| ||||||| |||||||||||||||||||||||||    
T  54463463 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagataatccaacaaactataagttaacttttttgtgttaccaaacata 54463555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 51760563 - 51760473
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||  |  ||||| ||  | |||||||||||||||||||||| |||||    
T  51760563 aagcttgttaccaaacacatcacgttttcatccaacaagcttataagttaatccaataaattgtaagctaacttttttgtgttactaaaca 51760473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 52184834 - 52184924
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| |||||||||  |  || |||||||||||||||||||||||||||||||||||||    
T  52184834 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagttaatctaacaagctataagctaacttttttgtgttaccaaaca 52184924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 52959384 - 52959294
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| ||||||||||||| |||||||||  |  |||||||| |||||||||| ||| ||||||||||||||||    
T  52959384 aagcttgttaccaaacacgtcacgttttcatccaacgagcttataagttaatccaacaaactataagctagcttatttgtgttaccaaaca 52959294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 40374548 - 40374605
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || ||||||||||||||||| || ||||||||||||||||||||    
T  40374548 aacaagcttataagctagtccaacaagctataagttagcttttttgtgttaccaaaca 40374605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 48747463 - 48747406
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||| || |||||||||||||||||||||||||||||||    
T  48747463 aacaagcttataagctagtccaataaactataagctaacttttttgtgttaccaaaca 48747406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 17666888 - 17666804
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| || ||| ||||||||||||| |||||||||  |  ||||| ||||||||||||| |||||||| |||||||||||    
T  17666888 gttaccaaacacgtcacgttttcatccaacgagcttataagttaatccaataagctataagctagcttttttgggttaccaaaca 17666804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 36660176 - 36660236
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatag 271  Q
    ||||||||||||| ||  |||||||| |||||||||| |||||||||||||||||||||||    
T  36660176 aacaagcttataagctaatccaacaaactataagctagcttttttgtgttaccaaacatag 36660236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 50938277 - 50938341
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtcat 275  Q
    |||||| |||||| || |||||||||||||||||||||||| || ||||||||||||| ||||||    
T  50938277 aacaaggttataagctagtccaacaagctataagctaacttattcgtgttaccaaacacagtcat 50938341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 268
Target Start/End: Complemental strand, 4070901 - 4070818
Alignment:
Q  185 ttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||| |||||| ||||||||||||| | ||||||| || || |||||| |||||| ||| ||| ||||||||||||||||    
T  4070901 ttaccaaacacatcacgttttcatccaactaacttataagctagttcaacaaactataaactagcttatttgtgttaccaaaca 4070818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 9558867 - 9558957
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| |||||| ||||||||| ||  || |||||||||||||||| ||| ||| ||||||||||||    
T  9558867 aagcttgttaccaaacacgtcacgttttcttccaacgagcttataagctaatctaacaagctataagctagcttatttatgttaccaaaca 9558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 12055522 - 12055612
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||  ||||||||| ||  |||||||| |||||||||| ||||||||||||||||||||    
T  12055522 aagcttgttaccaaacacgccacgttttcatctaaggagcttataagctaatccaacaaactataagctagcttttttgtgttaccaaaca 12055612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 35405625 - 35405543
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaa 266  Q
    |||| ||||||| ||| ||||||||| ||| || |||||||||  |||||||| |||||||||| ||||||||||||| ||||    
T  35405625 gttatcaaatacgtcacgttttcatctaacgagtttataaactaatccaacaaactataagctagcttttttgtgttatcaaa 35405543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 42527978 - 42528036
Alignment:
Q  107 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttct 164  Q
    ||||||||||||| || |||||||||||||||| |||||||||| ||||||||||||||    
T  42527978 tggaagaaaatgtgaaaagctatcagctataagctaaaaagctacttgaaatagcttct 42528036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 5505991 - 5505934
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||| || |||||||||| ||||||||| ||||||||||||||||||||    
T  5505991 aacaaacttataagctagtccaacaagttataagctagcttttttgtgttaccaaaca 5505934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 6586324 - 6586267
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || ||||||||| |||||| ||||||||||| ||||||||||||    
T  6586324 aacaagcttataagctagtccaacaaactataaactaacttttttatgttaccaaaca 6586267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 41889461 - 41889518
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||||| ||||||||||||||||||||  || || |||||||||||||    
T  41889461 aacaagcttataaactagtccaacaagctataagctagtttattcgtgttaccaaaca 41889518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 42167372 - 42167429
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||| || |||||||||||||    
T  42167372 aacaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaaca 42167429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 46115047 - 46114990
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| ||  ||||||||||||||||||| ||| ||||||||||||||||    
T  46115047 aacaagcttataagctaatccaacaagctataagctagcttatttgtgttaccaaaca 46114990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 46668400 - 46668343
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||  | |||||||||||||||||||| ||||||| ||||||||||||    
T  46668400 aacaagcttataagttagtccaacaagctataagctagcttttttatgttaccaaaca 46668343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 30317957 - 30318041
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||| |||| || ||| ||||||||| ||| ||||||||| ||  |||||||| |||||||||| | ||||||||||||||||||    
T  30317957 gttatcaaacacgtcacgttttcatctaacgagcttataagctaatccaacaaactataagctagcatttttgtgttaccaaaca 30318041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 32390154 - 32390198
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaactttttt 255  Q
    ||||||||||||| || ||||||||||||||||||||||||||||    
T  32390154 aacaagcttataagctagtccaacaagctataagctaactttttt 32390198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 48051080 - 48050996
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| || ||| ||||||||| ||| |||||||||  |  ||||||||||||||||||| |||||||| |||| ||||||    
T  48051080 gttaccaaacacgtcacgttttcatctaacgagcttataagttaatccaacaagctataagctagcttttttgggttaacaaaca 48050996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 22978138 - 22978083
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaa 266  Q
    ||||||||||||| || |||||||||||||||||||| ||| || |||||||||||    
T  22978138 aacaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaa 22978083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 36806981 - 36806926
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaa 266  Q
    ||||||||||||| || ||||||||||||| || ||| ||||||||||||||||||    
T  36806981 aacaagcttataagctagtccaacaagctaaaaactagcttttttgtgttaccaaa 36806926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 2557909 - 2557999
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| |||||||||  |  || ||||||||||||| || ||||||||||||||||||||    
T  2557909 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagttaatcaaacaagctataagttagcttttttgtgttaccaaaca 2557999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 17666707 - 17666617
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| |||||||||||| |  |||||| ||||||||||||||||| ||  | ||||||||||||||||| ||| |   ||||||||||||    
T  17666707 aagcttgttaccaaatacgttgtgttttgatccaacaagcttataagctaattcaacaagctataagctagcttctcgttgttaccaaaca 17666617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 45356425 - 45356515
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||| ||||||||||  |||| ||||||||||||||||| ||  | |||||||||||||| || ||| ||  ||||||||||||    
T  45356425 aagcttgttactaaatacatcacattttgatccaacaagcttataagctaattcaacaagctataagttagcttcttgatgttaccaaaca 45356515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 7041789 - 7041732
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||| ||  ||||||||||||    
T  7041789 aacaagcttataagctagtccaacaagctataagctagcttattcttgttaccaaaca 7041732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 34435896 - 34435953
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  34435896 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 34435953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 34785918 - 34785975
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||| ||||||||||||| ||| | ||||||||||||||    
T  34785918 aacaagcttataagctagtccaataagctataagctagcttatgtgtgttaccaaaca 34785975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 39129429 - 39129376
Alignment:
Q  215 agcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||  | |||||||||||||||||||| ||||||| ||||||||||||    
T  39129429 agcttataagatagtccaacaagctataagctagcttttttatgttaccaaaca 39129376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 41888868 - 41888811
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || ||||||||| |||||||||| ||| || |||||||||||||    
T  41888868 aacaagcttataagctagtccaacaaactataagctagcttattcgtgttaccaaaca 41888811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 41991605 - 41991662
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  41991605 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 41991662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 42293069 - 42293004
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataa 243  Q
    ||||| ||||||||| |||||| ||||||||||||| | ||||||| || ||||||||| ||||||    
T  42293069 aagcttgttaccaaacacatcacgttttcatccaacgaacttataagctagtccaacaaactataa 42293004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 43860785 - 43860728
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||| || || ||||||||||    
T  43860785 aacaagcttataagctagtccaacaagctataagctagcttattcgtattaccaaaca 43860728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 50935772 - 50935715
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||| ||||||||||||| ||| || |||||||||||||    
T  50935772 aacaagcttataagctagtccaataagctataagctagcttattcgtgttaccaaaca 50935715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 54463377 - 54463434
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  54463377 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 54463434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 43968365 - 43968432
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaactt 251  Q
    ||||||||| || ||||||||| ||||||||||||||||| ||  | ||||||  |||||||||||||    
T  43968365 gttaccaaacacgtcatgttttgatccaacaagcttataagctaattcaacaaattataagctaactt 43968432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 1361739 - 1361673
Alignment:
Q  202 ttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||| ||| ||| ||||||||| ||  ||||||||||||||||||| | |||||||||||| |||||    
T  1361739 tttttatctaacgagcttataagctaatccaacaagctataagctagcctttttgtgttacgaaaca 1361673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 12122181 - 12122271
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || |||  |||| || |||||||||||||| ||  | ||||||||||||||||| ||| ||  ||||||||||||    
T  12122181 aagcttgttaccaaacacgtcacattttgatacaacaagcttataagctaattcaacaagctataagctagcttcttgttgttaccaaaca 12122271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 12764850 - 12764792
Alignment:
Q  105 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    ||||||||||||| |||| || ||||||||||||| | |||||||| ||||||||||||    
T  12764850 attggaagaaaatataaaaagatatcagctataagctcaaaagctacttgaaatagctt 12764792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 30743021 - 30743111
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||| ||  |||||||| ||| ||||||||| ||  |||||||| |||||| ||||||||||| | ||| ||||||    
T  30743021 aagcttgttaccaaacacaccacattttcatctaaccagcttataagctaatccaacaaactataaactaacttttttatattatcaaaca 30743111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 45355182 - 45355132
Alignment:
Q  218 ttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||| || |||||| ||||||||| ||| ||||||||||||||||||||    
T  45355182 ttataacctagtccaagaagctataaactagcttttttgtgttaccaaaca 45355132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 51063002 - 51062912
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| |||| |||| || ||| ||||||||| ||| | |||||||  |  | ||||||||||||||||| ||||||||||||| ||||||    
T  51063002 aagcttgttatcaaacacgtcacgttttcatctaacgaacttataagataattcaacaagctataagctagcttttttgtgttaacaaaca 51062912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 6124885 - 6124836
Alignment:
Q  110 aagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaata 158  Q
    |||||||||| || |||||||||||||||| |||||||||| ||||||||    
T  6124885 aagaaaatgtgaaaagctatcagctataagctaaaaagctatttgaaata 6124836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 8321352 - 8321409
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| |||| |||||||    
T  8321352 ttggaagaaaatataaaaagctaccagctataagctaaaaagctatttgatatagctt 8321409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 13353455 - 13353418
Alignment:
Q  231 caacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  13353455 caacaagctataaactagcttttttgtgttaccaaaca 13353418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 40980180 - 40980237
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||| |||||| || || |||||| ||||||||||  |||||||||||||||||||    
T  40980180 aacaagtttataagctagttcaacaaactataagctagtttttttgtgttaccaaaca 40980237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 42877299 - 42877242
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||| |||||||| || |||||| ||||||||||||| ||| || |||||||||||||    
T  42877299 aacatgcttataagctagtccaagaagctataagctagcttattcgtgttaccaaaca 42877242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 48072035 - 48071978
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || ||||||||||||||||||||  || || |||||| ||||||    
T  48072035 aacaagcttataagctagtccaacaagctataagctagtttattcgtgttaacaaaca 48071978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 268
Target Start/End: Complemental strand, 49918286 - 49918257
Alignment:
Q  239 tataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||||||||||||||||||||    
T  49918286 tataagctaacttttttgtgttaccaaaca 49918257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 50938155 - 50938216
Alignment:
Q  105 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 165  Q
    ||||||||||||| || | | |||||||||||||| | |||||||| |||||||||||||||    
T  50938155 attggaagaaaatatataaaactatcagctataagctcaaaagctacttgaaatagcttctc 50938216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 51063088 - 51063031
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||  |||||||||| ||||||||||||    
T  51063088 ttggaagaaaatataaaaagctaccagctataaactaaaaagctatttgaaatagctt 51063031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 52184748 - 52184805
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| || |||||||||    
T  52184748 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttaaaatagctt 52184805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 10809525 - 10809581
Alignment:
Q  197 tcatgttttcatccaacaagcttataaactggtccaacaagctataagctaactttt 253  Q
    ||||||||| ||||||||||||||||| ||  | ||| ||||||||||||| |||||    
T  10809525 tcatgttttgatccaacaagcttataagctaattcaagaagctataagctagctttt 10809581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 39129359 - 39129295
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtcat 275  Q
    ||||||||||||| || |||||||||||||||  ||| ||| || ||||||||| ||| ||||||    
T  39129359 aacaagcttataagctagtccaacaagctatagactagcttattcgtgttaccacacacagtcat 39129295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 98 - 268
Target Start/End: Complemental strand, 53431816 - 53431632
Alignment:
Q  98 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctcnnnnnnnnctataagctcgt----------- 185  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||| |||||||||        ||||||||||||               
T  53431816 ggttattattggaagaaaatgtaaaaagctatcagctataagctaaaaagctacttgaattagcttctcaagaaaagctataagctcgtgagaaaagttt 53431717  T
Q  186 --taccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
      ||||||| |||||||||||||||||||||| ||||||| || ||||||||||||||||||||  |||||||||||||||||||    
T  53431716 gttaccaaacacatcatgttttcatccaacaaacttataagctagtccaacaagctataagctacattttttgtgttaccaaaca 53431632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 30653298 - 30653388
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  30653298 aagcttgttaccaaacacatcatgttttcatccaacaagcttataagctagtccaacaagccataagctaacttttttgtgttaccaaaca 30653388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 195 - 279
Target Start/End: Original strand, 55496061 - 55496145
Alignment:
Q  195 catcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtcatacta 279  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| | || |||||||    
T  55496061 catcatgttttcatccaacaagcttataagctagtccaacaagctataagctaacttttttgtgttaccaaaaacagccatacta 55496145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 185 - 268
Target Start/End: Complemental strand, 40674833 - 40674749
Alignment:
Q  185 ttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagc-tataagctaacttttttgtgttaccaaaca 268  Q
    |||||||| ||||||||||||||||||| |||||||||| || ||||||||||| ||||||||||||||||||||||||||||||    
T  40674833 ttaccaaacacatcatgttttcatccaataagcttataagctagtccaacaagcttataagctaacttttttgtgttaccaaaca 40674749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 185 - 268
Target Start/End: Complemental strand, 24152761 - 24152678
Alignment:
Q  185 ttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||| |||||| ||||||||||||| |||||||||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  24152761 ttaccaaacacatcacgttttcatccaactagcttataaactagtccaacaagctataagctagcttatttgtgttaccaaaca 24152678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 55495102 - 55495170
Alignment:
Q  98 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 165  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||    
T  55495102 ggttattattggaagaaaatgtaaaaagctatcagctataagttaaaaagctacttgaaatagcttctc 55495170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 6238280 - 6238190
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  6238280 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 6238190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 6287923 - 6287839
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| |||||| |||||||||||| || ||||||| ||  || || ||||||||||||||||||||||||||||||||||    
T  6287923 gttaccaaacacatcacgttttcatccaataaacttataagctaatctaagaagctataagctaacttttttgtgttaccaaaca 6287839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 55495018 - 55495066
Alignment:
Q  14 gagaagagaaaaacaaaacgtgagtgagtgggacggttgatttgtttac 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  55495018 gagaagagaaaaacaaaacgtgagtgagtgggacggttgatttgtttac 55495066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 19801870 - 19801960
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  19801870 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 19801960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 33984180 - 33984090
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||| ||  | ||||||||||||||||| ||||||||||||||||||||    
T  33984180 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaattcaacaagctataagctagcttttttgtgttaccaaaca 33984090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 39840202 - 39840292
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  39840202 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 39840292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 53284099 - 53284009
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  53284099 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 53284009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 19912732 - 19912675
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  19912732 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 19912675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 30411292 - 30411349
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  30411292 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 30411349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 55001757 - 55001841
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| ||| || ||||||||| ||| ||||||||| ||  |||||||||||||||||||  |||||||||||||||||||    
T  55001757 gttaccaaacacaccacgttttcatctaacgagcttataagctaatccaacaagctataagctagtttttttgtgttaccaaaca 55001841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 178 - 273
Target Start/End: Complemental strand, 43374687 - 43374592
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtc 273  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||||||| | |||||||||||||||||| ||||    
T  43374687 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagctagcatttttgtgttaccaaacacagtc 43374592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 47633851 - 47633930
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgt 257  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||| ||  |||||||||||||||||||||||||||||    
T  47633851 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataagctaacttttttgt 47633930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 25687078 - 25686988
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| |||||| |||||||| |||||||||||||| ||  ||||| || ||||||  || ||||||||||||||||||||    
T  25687078 aagcttgttaccaaacacatcacgttttcatacaacaagcttataagctaatccaaaaaactataaattagcttttttgtgttaccaaaca 25686988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 7113559 - 7113620
Alignment:
Q  215 agcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtcata 276  Q
    ||||||||| || |||||||||||||||||||| ||||||| |||||||||||| |||||||    
T  7113559 agcttataagctagtccaacaagctataagctagcttttttatgttaccaaacacagtcata 7113620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 38005604 - 38005551
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttacca 264  Q
    ||||| |||||||||| |||||||||||||||||||||||||||| ||||||||    
T  38005604 aacaaacttataaactagtccaacaagctataagctaacttttttatgttacca 38005551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 45549712 - 45549655
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||    
T  45549712 aacaagcttataagctagcccaacaagctataagctagcttttttgtgttaccaaaca 45549655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 37114447 - 37114531
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| ||  || ||||||||  ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  37114447 gttaccaaacacgccacgttttcatataacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 37114531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 37498289 - 37498205
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| || ||| ||||||||||||| ||||||||| ||  |||||||| ||||||| || | ||||||||||||||||||    
T  37498289 gttaccaaacacgtcacgttttcatccaacgagcttataagctaatccaacaaactataagttagcctttttgtgttaccaaaca 37498205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 51941189 - 51941105
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| | |||||||||| ||||||||| |||||||  | |||||||||||||||||||| ||| || ||||||| |||||    
T  51941189 gttaccaaacatatcatgttttgatccaacaaacttataagttagtccaacaagctataagctagcttattcgtgttactaaaca 51941105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 202347 - 202292
Alignment:
Q  213 caagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  202347 caagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 202292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 1771882 - 1771937
Alignment:
Q  213 caagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||| ||||||    
T  1771882 caagcttataagctagtccaacaagctataagctatcttttttgtgttatcaaaca 1771937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 19801018 - 19800927
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaactt-ttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||  ||| ||||||||| ||  ||||||||||||||||||||||| |||||||||||||||||    
T  19801018 aagcttgttaccaaacacgccacgttttcatgtaacgagcttataagctaatccaacaagctataagctaactttttttgtgttaccaaaca 19800927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 268
Target Start/End: Original strand, 49335205 - 49335288
Alignment:
Q  185 ttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||| || ||| |||||| || ||| | ||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  49335205 ttaccaaacacgtcacgttttcttctaacgaacttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 49335288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 2943659 - 2943748
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||| ||  |||||||| ||||||||||  |||||||||||||||||||    
T  2943659 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaaactataagctag-ttttttgtgttaccaaaca 2943748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 44448539 - 44448449
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| |||||||||  |  |||||||||||||||| || ||||||||||||||||||||    
T  44448539 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagttaatccaacaagctataagttagcttttttgtgttaccaaaca 44448449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 54683689 - 54683599
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| ||||||||||||| ||||||||| ||  || |||||| ||||||||| ||| ||| ||||||||||||    
T  54683689 aagcttgttaccaaacacgtcacgttttcatccaacgagcttataagctaatctaacaagttataagctagcttatttatgttaccaaaca 54683599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 27531889 - 27531832
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||||| ||||||||||||||||| || | | ||||||||||||||||    
T  27531889 aacaagcttataaactagtccaacaagctataagttagcctatttgtgttaccaaaca 27531832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 51924085 - 51924028
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||| |||  |||||||||||||||||||    
T  51924085 aacaagcttataagctagtccaacaagctataaactagtttttttgtgttaccaaaca 51924028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 55610722 - 55610665
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || || |||||||||||||||||  |||||||||||||||||||    
T  55610722 aacaagcttataagctagtacaacaagctataagctagtttttttgtgttaccaaaca 55610665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 14269864 - 14269920
Alignment:
Q  212 acaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||| || |||||||||||||||||||| ||| || |||||||||||||    
T  14269864 acaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaaca 14269920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 40685864 - 40685785
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| |||||||||||||||||||| | ||||||||||     |||||||| ||||||| ||| ||| ||||||||||||    
T  40685864 gttaccaaacacatcatgttttcatccaacgaacttataaact-----aacaagctgtaagctagcttatttatgttaccaaaca 40685785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 49646084 - 49646024
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatag 271  Q
    ||||||||||||| ||  ||||||| ||||||||||||||| || ||||||||||||||||    
T  49646084 aacaagcttataagctaatccaacaggctataagctaacttattcgtgttaccaaacatag 49646024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 49648860 - 49648916
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaac 267  Q
    ||||||||||||| || |||||||||||||||||||| ||| || ||||||||||||    
T  49648860 aacaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaac 49648916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 50790883 - 50790819
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtcat 275  Q
    ||||||||||||| || |||||||||| ||||||||| ||| || ||||||||||||||| ||||    
T  50790883 aacaagcttataagctagtccaacaagttataagctagcttattcgtgttaccaaacatattcat 50790819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 7141180 - 7141219
Alignment:
Q  229 tccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  7141180 tccaacaagctataagctagcttttttgtgttaccaaaca 7141219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 45561346 - 45561412
Alignment:
Q  201 gttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| ||| ||||||||| ||  ||||||||||||||||||| | ||||||||||||||||||    
T  45561346 gttttcatctaacgagcttataagctaatccaacaagctataagctagc-tttttgtgttaccaaaca 45561412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 25687165 - 25687107
Alignment:
Q  105 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    ||||||||||||| |||| |||||||||||||||| | |||||||| ||||||||||||    
T  25687165 attggaagaaaatataaaaagctatcagctataagttcaaaagctacttgaaatagctt 25687107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 44525945 - 44526035
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| |||||| ||||||||  ||| | ||||||| ||  |||||||| |||||||||| |||||||  |||||||||||    
T  44525945 aagcttgttaccaaacacatcacgttttcatttaacgaacttataagctaatccaacaaactataagctagcttttttaagttaccaaaca 44526035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 2390310 - 2390367
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| |||||||  | |||||| ||||||||||||| ||||||||||||||||||||    
T  2390310 aacaaacttataagttagtccaagaagctataagctagcttttttgtgttaccaaaca 2390367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 6238366 - 6238309
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  6238366 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 6238309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 7141075 - 7141124
Alignment:
Q  117 tgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 165  Q
    |||||| |||||||||||||||| |||||||||| |||||||||||||||    
T  7141075 tgtaaaaagctatcagctataagttaaaaagctacttgaaatagcttctc 7141124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 19801784 - 19801841
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  19801784 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 19801841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 28459671 - 28459614
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||  | ||||||||| |||||| |||||||||||||||| |||||||    
T  28459671 aacaagcttataagatagtccaacaaactataaactaacttttttgtgttgccaaaca 28459614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 30653557 - 30653501
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| ||  ||||||||||||||| ||| ||||||||||||||||||||    
T  30653557 aacaagcttataagctaatccaacaagctataa-ctagcttttttgtgttaccaaaca 30653501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 37114355 - 37114412
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  37114355 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 37114412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 43590593 - 43590536
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||| || |||||||||||||||||||| ||| || |||||||||||||    
T  43590593 aacaaacttataagctagtccaacaagctataagctagcttattcgtgttaccaaaca 43590536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 47633765 - 47633822
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  47633765 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 47633822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 48953089 - 48953032
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||| |  |||||||||||||    
T  48953089 aacaagcttataagctagtccaacaagctataagctagcttatccgtgttaccaaaca 48953032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 49335112 - 49335169
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  49335112 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 49335169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 50792456 - 50792513
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||| ||| ||| || |||||||||||||    
T  50792456 aacaagcttataagctagtccaacaagctataaactagcttattcgtgttaccaaaca 50792513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 55001669 - 55001722
Alignment:
Q  110 aagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||| |||| |||||||||||||||| |||||||||| ||||||||||||    
T  55001669 aagaaaatataaaaagctatcagctataagttaaaaagctatttgaaatagctt 55001722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 55660605 - 55660548
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||| |||||| || |||||||||||||||||||| ||| ||| ||||||||||||    
T  55660605 aacaagtttataagctagtccaacaagctataagctagcttatttatgttaccaaaca 55660548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 7113629 - 7113693
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtcat 275  Q
    ||||||||||||| || |||||||||||||||||||| | | || |||||| |||||| ||||||    
T  7113629 aacaagcttataagctagtccaacaagctataagctagcgtattggtgttagcaaacacagtcat 7113693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Original strand, 19871013 - 19871077
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtcat 275  Q
    |||||| |||||| || ||||| |||||||||||||| ||| || ||||||||||||| ||||||    
T  19871013 aacaaggttataagctagtccagcaagctataagctagcttattcgtgttaccaaacacagtcat 19871077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 6288016 - 6287958
Alignment:
Q  105 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    ||||||||||||| |||| ||||| |||||||||| | |||||||| ||||||||||||    
T  6288016 attggaagaaaatataaaaagctaccagctataagctcaaaagctacttgaaatagctt 6287958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 10658923 - 10658980
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||| ||||||||||||| ||  || |||||||||||||    
T  10658923 aacaagcttataagctagtccaataagctataagctagctaattcgtgttaccaaaca 10658980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 10873068 - 10873125
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||| ||||||||||||| ||  || |||||||||||||    
T  10873068 aacaagcttataagctagtccaataagctataagctagctaattcgtgttaccaaaca 10873125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 19870019 - 19869962
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || || ||| ||||||||||||| ||| || |||||||||||||    
T  19870019 aacaagcttataagctagttcaataagctataagctagcttattcgtgttaccaaaca 19869962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 20356718 - 20356799
Alignment:
Q  188 ccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaactttt-ttgtgttaccaaaca 268  Q
    ||||| || ||| ||||||||| ||| ||||||||| ||  ||||||||| |||||||||  |||| |||||||||||||||    
T  20356718 ccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagttataagctagttttttttgtgttaccaaaca 20356799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 31997891 - 31997834
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||  ||||| ||||||| |||||||||| |||||    
T  31997891 aacaagcttataagctagtccaacaaattataatctaacttgtttgtgttactaaaca 31997834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 32012725 - 32012668
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| ||| |||||| |||||||||| ||||||||||||    
T  32012725 ttggaagaaaatataaaaagctaccaggtataagctaaaaagctacttgaaatagctt 32012668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 40685955 - 40685910
Alignment:
Q  107 tggaagaaaatgtaaagagctatcagctataagataaaaagctatt 152  Q
    ||||||||||| |||| ||||| |||||||||| ||||||||||||    
T  40685955 tggaagaaaatataaaaagctaccagctataaggtaaaaagctatt 40685910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 44448625 - 44448572
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaata 158  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||    
T  44448625 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaata 44448572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 53284185 - 53284128
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||| | |||||||||| |||||||||| ||||||||||||    
T  53284185 ttggaagaaaatataaaaagcaaccagctataagctaaaaagctacttgaaatagctt 53284128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 318451 - 318491
Alignment:
Q  228 gtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||| ||| ||||||||| ||||||||||||||||||||    
T  318451 gtccaataagttataagctagcttttttgtgttaccaaaca 318491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 31624438 - 31624498
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatag 271  Q
    ||||||||||||| || ||| ||||| |||||||||  ||| || ||||||||||||||||    
T  31624438 aacaagcttataagctagtctaacaaactataagctcgcttattcgtgttaccaaacatag 31624498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 7e-31; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 98 - 268
Target Start/End: Original strand, 2773496 - 2773680
Alignment:
Q  98 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctcnnnnnnnnctataagctcgt----------- 185  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||         |||||||||||               
T  2773496 ggttattattggaagaaaatgtaaaaagctatcagctataagctaaaaagctacttgaaatagcttctcaaaaaaagttataagctcgtgagaaaagctt 2773595  T
Q  186 --taccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
      ||||||  || ||| ||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  2773596 gttaccaagcacgtcacgttttcatccaacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 2773680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 106 - 268
Target Start/End: Complemental strand, 39733891 - 39733728
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagctatt-gaaatagcttctcnnnnnnnnctataagctcgttaccaaatacatcatgttt 204  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||||| |||||||||| ||        ||||||||| ||||||||| ||| || ||||    
T  39733891 ttggaagaaaatataaaaagctaccagctataagctaaaaagctatttgaaatagcttttcaaaaaacgctataagcttgttaccaaacacaccacgttt 39733792  T
Q  205 tcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||| ||||||||| ||  ||||||||| ||||||||| ||||||||||||||||||||    
T  39733791 tcatctaacgagcttataagctaatccaacaaggtataagctagcttttttgtgttaccaaaca 39733728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 3512557 - 3512473
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||  ||||| ||||||||||||| ||||||||||||||||||||    
T  3512557 gttaccaaacacatcacgttttcatccaacaagcttataagctaatccaagaagctataagctagcttttttgtgttaccaaaca 3512473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 20697513 - 20697603
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || | ||||||||||| ||| ||||||||| ||  ||||||||||||||||||||||||||||| ||||||||||    
T  20697513 aagcttgttaccaaacacgttatgttttcatctaacgagcttataagctaatccaacaagctataagctaacttttttgtattaccaaaca 20697603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 22215203 - 22215113
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||||||||||||||||||||||||||||    
T  22215203 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagctaacttttttgtgttaccaaaca 22215113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 194 - 274
Target Start/End: Original strand, 34903401 - 34903481
Alignment:
Q  194 acatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtca 274  Q
    |||||||||||||||||||||||||||||| || |||||||||| | |||||||  || |||||||||||||||| |||||    
T  34903401 acatcatgttttcatccaacaagcttataagctagtccaacaaggtgtaagctagtttatttgtgttaccaaacacagtca 34903481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 24804494 - 24804584
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||||||  |||||||||||||||||||||  ||  ||||| ||||||||||||| ||||||||||||||| ||||    
T  24804494 aagcttgttaccaaacacatcacattttcatccaacaagcttataggctaatccaagaagctataagctagcttttttgtgttaccgaaca 24804584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 43800776 - 43800866
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  43800776 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 43800866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 4477659 - 4477716
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  4477659 aacaaacttataatctagtccaacaagctataagctaacttttttgtgttaccaaaca 4477716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 12208865 - 12208808
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  12208865 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 12208808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 12453293 - 12453236
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  12453293 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 12453236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 18146401 - 18146344
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  18146401 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 18146344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 43150311 - 43150254
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  43150311 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 43150254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 45069859 - 45069916
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  45069859 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 45069916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 16786544 - 16786628
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| |||||| |||||||| |||||||||||||| ||  ||||| |||||||||| || |||||||||||| |||||||    
T  16786544 gttaccaaacacatcacgttttcattcaacaagcttataagctaatccaagaagctataagttagcttttttgtgttgccaaaca 16786628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 197 - 268
Target Start/End: Complemental strand, 25099486 - 25099415
Alignment:
Q  197 tcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| ||| ||||||||| ||  ||||||||| ||||||||| ||||||||||||||||||||    
T  25099486 tcatgttttcatctaacgagcttataagctaatccaacaagttataagctagcttttttgtgttaccaaaca 25099415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 284910 - 284820
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| | ||||||| ||  ||||||||||||||| ||||||||||||||||||||||||    
T  284910 aagcttgttaccaaacacgccacgttttcatctaacgaacttataagctaatccaacaagctataaactaacttttttgtgttaccaaaca 284820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 630967 - 631057
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| | ||||||| ||  ||||||||||||||| ||||||||||||||||||||||||    
T  630967 aagcttgttaccaaacacgccacgttttcatctaacgaacttataagctaatccaacaagctataaactaacttttttgtgttaccaaaca 631057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 816779 - 816869
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| | ||||||| ||  ||||||||||||||| ||||||||||||||||||||||||    
T  816779 aagcttgttaccaaacacgccacgttttcatctaacgaacttataagctaatccaacaagctataaactaacttttttgtgttaccaaaca 816869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 45237834 - 45237890
Alignment:
Q  212 acaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||| || || ||||||||||||||||| ||||||||||||||||||||    
T  45237834 acaagcttataagcttgttcaacaagctataagctagcttttttgtgttaccaaaca 45237890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 5838324 - 5838258
Alignment:
Q  202 ttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||| ||||||||||||| ||  |||||||||||||||| || ||||||||| ||||||||||    
T  5838324 ttttcatctaacaagcttataagctaatccaacaagctataagttagcttttttgtattaccaaaca 5838258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 25100222 - 25100312
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||   | |||||||||||||||| ||||||||||||||||||||    
T  25100222 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaagctaacaagctataagctagcttttttgtgttaccaaaca 25100312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 35057308 - 35057398
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||| |||||||| ||||||||| ||  || |||||||||||||||| ||| ||| ||||||||||||    
T  35057308 aagcttgttaccaaacacgtcacgtttgcatccaacgagcttataagctaatctaacaagctataagctatcttatttatgttaccaaaca 35057398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 35160277 - 35160367
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| | ||||||| ||  ||||| ||||||||||||| ||||||||||||||||||||    
T  35160277 aagcttgttaccaaacacgccacgttttcatctaacgaacttataagctaatccaataagctataagctagcttttttgtgttaccaaaca 35160367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 36859314 - 36859244
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttt 254  Q
    |||||||||||  ||| ||||||||| ||| ||||||||| ||  ||||||||||||||||||||||||||    
T  36859314 gttaccaaataggtcacgttttcatctaacgagcttataagctaatccaacaagctataagctaacttttt 36859244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 40529569 - 40529503
Alignment:
Q  202 ttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||| ||||||||||||| ||   | |||||||||||||||| ||||||||||||||||||||    
T  40529569 ttttcatctaacaagcttataagctaaacaaacaagctataagctagcttttttgtgttaccaaaca 40529503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 25100136 - 25100193
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| |||||||||||||||| |||||||||| ||||||||||||    
T  25100136 ttggaagaaaatataaaaagctatcagctataagctaaaaagctacttgaaatagctt 25100193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 31642789 - 31642846
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||| || |||||||||||||    
T  31642789 aacaagcttataatctagtccaacaagctataagctagcttattcgtgttaccaaaca 31642846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 35397940 - 35397997
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| |||||||||||||||| |||||||||| ||||||||||||    
T  35397940 ttggaagaaaatataaaaagctatcagctataagctaaaaagctacttgaaatagctt 35397997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 38364511 - 38364568
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||||| ||||||||||||||||||||  || || |||||||||||||    
T  38364511 aacaagcttataaactagtccaacaagctataagctagtttattcgtgttaccaaaca 38364568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 5574688 - 5574604
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| ||  || ||||||||| ||| |||||||||  |  | |||||| |||||||||||||||||||||||||||||||    
T  5574688 gttaccaaacacgccacgttttcatctaacgagcttataagttaattcaacaaactataagctaacttttttgtgttaccaaaca 5574604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 38746987 - 38747055
Alignment:
Q  201 gttttcatccaacaagcttataaactggtccaacaagctataagctaac-ttttttgtgttaccaaaca 268  Q
    ||||||||| ||| ||||||||| ||  ||||||||||||||||||| | |||||||||||||||||||    
T  38746987 gttttcatctaacgagcttataagctaatccaacaagctataagctagctttttttgtgttaccaaaca 38747055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 35019546 - 35019496
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgtta 261  Q
    ||||||||||||| || |||||||||||||||||||| ||| |||||||||    
T  35019546 aacaagcttataagctagtccaacaagctataagctatcttatttgtgtta 35019496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 39104218 - 39104280
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtc 273  Q
    ||||||||||||| || |||||||||  ||||||||| |||| ||||||||||||||| ||||    
T  39104218 aacaagcttataagctagtccaacaaattataagctagctttcttgtgttaccaaacacagtc 39104280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 5574780 - 5574723
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  5574780 ttggaagaaaatataaaaagctaccagctataagctaaaaagctatttgaaatagctt 5574723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 17121993 - 17121936
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  17121993 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 17121936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 20697427 - 20697484
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  20697427 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 20697484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 271
Target Start/End: Original strand, 21266871 - 21266964
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatag 271  Q
    ||||| ||||||||| || ||| ||||||||||||  ||||| ||| ||  || |||||||| ||||||| ||| ||| |||||||||||||||    
T  21266871 aagcttgttaccaaacacgtcacgttttcatccaatgagcttctaagctaatctaacaagctttaagctagcttatttatgttaccaaacatag 21266964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 25100424 - 25100367
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  25100424 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 25100367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 35160191 - 35160248
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||| | |||| |||||||||||||||| |||||||||| ||||||||||||    
T  35160191 ttggaagaaagtataaaaagctatcagctataagctaaaaagctacttgaaatagctt 35160248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 35253070 - 35253127
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || ||||| ||| |||||||||| ||| ||||||||||||||||    
T  35253070 aacaagcttataagcttgtccagcaaactataagctagcttgtttgtgttaccaaaca 35253127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 38746878 - 38746935
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  38746878 ttggaagaaaatataaaaagctaccagctataagttaaaaagctacttgaaatagctt 38746935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 40529679 - 40529622
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  40529679 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 40529622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 257
Target Start/End: Complemental strand, 41355697 - 41355624
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgt 257  Q
    ||||||||| |||||| ||||||||||||||| ||||||| ||  |||||  ||||||||||||  ||||||||    
T  41355697 gttaccaaacacatcacgttttcatccaacaaacttataagctaatccaaggagctataagctagtttttttgt 41355624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 41356349 - 41356304
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttg 256  Q
    ||||||||||||| || ||||||||||||||| |||||||||||||    
T  41356349 aacaagcttataagctagtccaacaagctatatgctaacttttttg 41356304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 43800690 - 43800747
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  43800690 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 43800747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 43874017 - 43873960
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || || ||||||||||||| ||| |||||||||| |||||||||    
T  43874017 aacaagcttataagctagttcaacaagctataaactagcttttttgtggtaccaaaca 43873960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 43129649 - 43129585
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtcat 275  Q
    |||||| |||||| || |||||||||||||||| ||| ||| || ||||||||||||| ||||||    
T  43129649 aacaaggttataagctagtccaacaagctataaactagcttattcgtgttaccaaacacagtcat 43129585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 14911833 - 14911767
Alignment:
Q  202 ttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||| ||| ||||||||| ||  |||||||| ||||||||||  ||||||||||||| |||||    
T  14911833 ttttcatctaacgagcttataagctaatccaacaaactataagctagattttttgtgttactaaaca 14911767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 16786451 - 16786509
Alignment:
Q  105 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    ||||||||||||| |||| ||||| |||||||||| | |||||||| ||||||||||||    
T  16786451 attggaagaaaatataaaaagctaccagctataagctcaaaagctagttgaaatagctt 16786509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 41789232 - 41789270
Alignment:
Q  228 gtccaacaagctataagctaacttttttgtgttaccaaa 266  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  41789232 gtccaacaagttataagctaacttatttgtgttaccaaa 41789270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 5838434 - 5838377
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||| | |||||||||| |||||||||| ||||||||||||    
T  5838434 ttggaagaaaatataaaaagccaccagctataagctaaaaagctacttgaaatagctt 5838377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 14911943 - 14911886
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| | ||| |||||||||| |||||||||| ||||||||||||    
T  14911943 ttggaagaaaatataaaaaactaccagctataagctaaaaagctacttgaaatagctt 14911886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 38760850 - 38760907
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||| |||  || ||||| ||||||||||    
T  38760850 aacaagcttataagctagtccaacaagctataaactagtttatttgtattaccaaaca 38760907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 42353730 - 42353787
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||| ||  |||||||| |||||| ||||||||||||| ||||||||||    
T  42353730 aacaaacttataagctaatccaacaaactataaactaacttttttgtattaccaaaca 42353787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 247
Target Start/End: Complemental strand, 29725800 - 29725764
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagcta 247  Q
    ||||||||||||| || ||||||||||||||||||||    
T  29725800 aacaagcttataagctagtccaacaagctataagcta 29725764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 41865379 - 41865289
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| ||  ||||| ||||||||||||| ||||||||||||||||||||    
T  41865379 aagctcgttaccaaacacatcacgttttcatccaacaagcttataagctaatccaagaagctataagctagcttttttgtgttaccaaaca 41865289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 2459653 - 2459743
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| |||||| |||||||||||| |||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  2459653 aagcttgttaccaaacacatcacgttttcatccaataagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 2459743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 38058841 - 38058751
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| |||||| ||||||| |||||||| |||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  38058841 aagcttgttaccaaacacatcacgttttcaaccaacaaggttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 38058751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 44277972 - 44278062
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| |||||| ||||||||||||| ||||||||| || ||||||||||||||||| || ||| ||||||||| ||||||    
T  44277972 aagcttgttaccaaacacatcacgttttcatccaactagcttataagctagtccaacaagctataagttagcttatttgtgttatcaaaca 44278062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 46742548 - 46742459
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaac 267  Q
    ||||| |||||||||  ||||||||||||||||||||||||||||| ||  ||||| || ||||||||||  ||||||||||||||||||    
T  46742548 aagcttgttaccaaacgcatcatgttttcatccaacaagcttataatctaatccaagaaactataagctagtttttttgtgttaccaaac 46742459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 12014728 - 12014644
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||| | ||| || ||||||||| ||| ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  12014728 gttaccacacacaccacgttttcatctaacgagcttataaactaatccaacaagttataagctaacttttttgtgttaccaaaca 12014644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 27747699 - 27747609
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  27747699 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 27747609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 30358166 - 30358076
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  30358166 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 30358076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 39325703 - 39325613
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  39325703 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 39325613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 50586186 - 50586276
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  50586186 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 50586276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 3796004 - 3796061
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  3796004 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 3796061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 5698185 - 5698128
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  5698185 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 5698128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 14390481 - 14390424
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  14390481 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 14390424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 100 - 164
Target Start/End: Complemental strand, 28343873 - 28343808
Alignment:
Q  100 ttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttct 164  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||||||| ||||||||||||||    
T  28343873 ttattattggaagaaaatgtaaaaagctatcagctataatctaaaaagctatttgaaatagcttct 28343808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 4361100 - 4361159
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacata 270  Q
    ||||||||||||| || |||||| || |||||||||||||||||||||||||||||||||    
T  4361100 aacaagcttataagctagtccaataaactataagctaacttttttgtgttaccaaacata 4361159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 11332934 - 11332844
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||| ||| ||||||  ||||||||| || ||||||||| || ||||||||| |||||| ||| ||||||||||||||||||||    
T  11332934 aagcttgttactaaacacatcaatttttcatcccacgagcttataagctagtccaacaaactataaactagcttttttgtgttaccaaaca 11332844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 11490955 - 11490865
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||| ||| ||||||  ||||||||| || ||||||||| || ||||||||| |||||| ||| ||||||||||||||||||||    
T  11490955 aagcttgttactaaacacatcaatttttcatcccacgagcttataagctagtccaacaaactataaactagcttttttgtgttaccaaaca 11490865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 28955562 - 28955652
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| |||||| ||||||||| ||| ||||||||| ||  || ||||||||||||| || ||||||| ||||||||||||    
T  28955562 aagcttgttaccaaacacatcacgttttcatctaacgagcttataagctaatctaacaagctataagttagcttttttatgttaccaaaca 28955652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 36739645 - 36739555
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||||| || ||| ||||||||| ||| |||||||||  |  |||||||| |||||| ||||||||||||| ||||||||||    
T  36739645 aagctcgttaccaaacacgtcacgttttcatctaacgagcttataagttaatccaacaaactataaactaacttttttgtattaccaaaca 36739555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 5698567 - 5698510
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||  | |||||||||||||||||||| ||||||||||||||||||||    
T  5698567 aacaagcttataagttagtccaacaagctataagctagcttttttgtgttaccaaaca 5698510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 38815580 - 38815644
Alignment:
Q  202 ttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaa 266  Q
    |||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||    
T  38815580 ttttcatctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaa 38815644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 45900255 - 45900171
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| |||||| |||||| || ||| ||||||||| ||  ||||||||||||||| ||| ||||| ||||||||||||||    
T  45900255 gttaccaaacacatcacgttttcttctaacgagcttataagctaatccaacaagctataaactagcttttctgtgttaccaaaca 45900171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 47326597 - 47326681
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| ||| || ||||||||| ||| ||||||||| ||  |||||||| |||||||||| |||||||| |||||||||||    
T  47326597 gttaccaaacacaccacgttttcatctaacgagcttataagctaatccaacaaactataagctagcttttttgggttaccaaaca 47326681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 2459568 - 2459627
Alignment:
Q  107 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 165  Q
    ||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||||    
T  2459568 tggaagaaaatgtgaaaagctatcagctataagctaaaaagctacttgaaatagcttctc 2459627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 11823653 - 11823586
Alignment:
Q  201 gttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| ||| ||||||||| ||  ||||||||||||||| ||| ||||||||||||||||||||    
T  11823653 gttttcatctaacgagcttataagctaatccaacaagctataaactagcttttttgtgttaccaaaca 11823586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 31656301 - 31656362
Alignment:
Q  98 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatag 159  Q
    ||||||||||| ||||||||||||| |||||||||||||||| |||||||||| |||||||||    
T  31656301 ggttattattg-aagaaaatgtaaaaagctatcagctataagctaaaaagctacttgaaatag 31656362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 31657107 - 31657197
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||| ||||| |||||| |||||||||| || ||||||||| ||  ||||||||  ||||| ||| ||||||||||||||||||||    
T  31657107 aagcttgttgccaaacacatcacgttttcatccgacgagcttataagctaatccaacaaattataaactagcttttttgtgttaccaaaca 31657197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 4640133 - 4640190
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||| || |||||||||||||    
T  4640133 aacaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaaca 4640190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 9223899 - 9223842
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||  | ||||||||||||||||| || ||||||||||||||||||||    
T  9223899 aacaagcttataagttagtccaacaagctataagttagcttttttgtgttaccaaaca 9223842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 23259144 - 23259087
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||| || |||||||||||||||||||||||| || |||||||||||||    
T  23259144 aacaaacttataagctagtccaacaagctataagctaacttattcgtgttaccaaaca 23259087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 29092661 - 29092604
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| |||||||| | |||||| ||||||| ||||||||||||||||||||||||||    
T  29092661 aacaaacttataaattagtccaaaaagctatgagctaacttttttgtgttaccaaaca 29092604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 30899470 - 30899519
Alignment:
Q  219 tataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  30899470 tataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 30899519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 31656428 - 31656371
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| ||| || |||||||||||||||| ||| ||||||||||||||||||||    
T  31656428 aacaagcttgtaagctagtccaacaagctataaactagcttttttgtgttaccaaaca 31656371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 35179879 - 35179822
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||| || |||||||||||||||||||| ||||||| ||||||||||||    
T  35179879 aacaaacttataagctagtccaacaagctataagctagcttttttatgttaccaaaca 35179822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 1190156 - 1190240
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||| ||||| ||| ||||||||||||||||||||    
T  1190156 gttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagttataaactagcttttttgtgttaccaaaca 1190240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 25365846 - 25365762
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| |  ||| ||||||||||||| |||||||||  |  || |||||||||||||||||||| ||| ||||||||||||    
T  25365846 gttaccaaacatgtcacgttttcatccaacgagcttataagttaatctaacaagctataagctaacttatttatgttaccaaaca 25365762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 38058923 - 38058867
Alignment:
Q  110 aagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 165  Q
    |||||||||| || |||||||||||||||| |||||||||| |||||||||||||||    
T  38058923 aagaaaatgtgaaaagctatcagctataagctaaaaagctatttgaaatagcttctc 38058867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 46315695 - 46315771
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttt 254  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||    
T  46315695 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttttt 46315771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 42628260 - 42628315
Alignment:
Q  213 caagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||| || |||||||||||||||| ||| ||||||||| ||||||||||    
T  42628260 caagcttataagctagtccaacaagctataaactagcttttttgtattaccaaaca 42628315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 44299984 - 44300039
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaa 266  Q
    ||||||||||||| || |||||||||||||||||||| ||| || |||||||||||    
T  44299984 aacaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaa 44300039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 9423062 - 9423156
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagt 272  Q
    ||||| ||||||||| ||||||  |||| ||||||||||||||||| ||  | |||||||||||||| |  ||| ||  ||||||||||||||||    
T  9423062 aagcttgttaccaaacacatcacattttgatccaacaagcttataagctaattcaacaagctataagttggcttcttgctgttaccaaacatagt 9423156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 11333019 - 11332961
Alignment:
Q  107 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttct 164  Q
    |||||||||||||||| ||| || ||||||||| |||||||||| ||||||||||||||    
T  11333019 tggaagaaaatgtaaaaagcaattagctataagctaaaaagctacttgaaatagcttct 11332961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 11491040 - 11490982
Alignment:
Q  107 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttct 164  Q
    |||||||||||||||| ||| || ||||||||| |||||||||| ||||||||||||||    
T  11491040 tggaagaaaatgtaaaaagcaattagctataagctaaaaagctacttgaaatagcttct 11490982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 44109972 - 44110022
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgtta 261  Q
    ||||||||||||| || |||||||||||||||||||| ||| |||||||||    
T  44109972 aacaagcttataagctagtccaacaagctataagctagcttatttgtgtta 44110022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 11823762 - 11823705
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  11823762 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 11823705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 27747785 - 27747728
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  27747785 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 27747728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 28314775 - 28314832
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  28314775 ttggaagaaaatataaaaagctaccagctataagttaaaaagctacttgaaatagctt 28314832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 28955476 - 28955533
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  28955476 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 28955533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 30358252 - 30358195
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  30358252 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 30358195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 47326505 - 47326562
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  47326505 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 47326562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 50586100 - 50586157
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  50586100 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 50586157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 25365937 - 25365881
Alignment:
Q  107 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    ||||||||||| |||| |||||||||||||||| |||||||||| ||||| ||||||    
T  25365937 tggaagaaaatataaaaagctatcagctataagctaaaaagctacttgaattagctt 25365881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 33076781 - 33076725
Alignment:
Q  107 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    ||||||||||| |||| |||||||||||||||| |||||||||| ||||| ||||||    
T  33076781 tggaagaaaatataaaaagctatcagctataagctaaaaagctacttgaattagctt 33076725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 39325557 - 39325605
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgt 259  Q
    ||||||||||||| || || ||||||||||||||||| |||||||||||    
T  39325557 aacaagcttataagctagttcaacaagctataagctagcttttttgtgt 39325605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 41865466 - 41865408
Alignment:
Q  105 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    ||||||||||||| |||| ||||| |||||||||| | |||||||| ||||||||||||    
T  41865466 attggaagaaaatataaaaagctaccagctataagctcaaaagctacttgaaatagctt 41865408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 4638571 - 4638510
Alignment:
Q  105 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 165  Q
    ||||||||||||| |||| |  ||||||||||||| | |||||||| |||||||||||||||    
T  4638571 attggaagaaaatataaaaaattatcagctataagctcaaaagctagttgaaatagcttctc 4638510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 12014820 - 12014763
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| ||||||||||  |||||||||||    
T  12014820 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacctgaaatagctt 12014763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 27667734 - 27667677
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||| || || ||| ||||||||| |||||| |||||||||||||||||    
T  27667734 aacaaacttataagctagttcaataagctataaactaactattttgtgttaccaaaca 27667677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 31496669 - 31496612
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||| |||||| || |||||| ||||||||||||| ||| | ||||||||||||||    
T  31496669 aacaagtttataagctagtccaagaagctataagctagcttatctgtgttaccaaaca 31496612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 39325789 - 39325732
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| |||| |||||||    
T  39325789 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgatatagctt 39325732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 11756916 - 11756976
Alignment:
Q  215 agcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtcat 275  Q
    ||||||||| || ||||||||||  |||||||| ||| || ||||||||||||| ||||||    
T  11756916 agcttataagctagtccaacaagtcataagctagcttattcgtgttaccaaacacagtcat 11756976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 28343775 - 28343692
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| |||||| ||||||||||||| | |||||||  |  |||||||| |||||| ||| | ||||||||||| ||||||    
T  28343775 gttaccaaacacatcacgttttcatccaacgaacttataagttactccaacaaactataaactagc-tttttgtgttagcaaaca 28343692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 268
Target Start/End: Complemental strand, 38667221 - 38667189
Alignment:
Q  236 agctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||| ||||||||||||||||||||||||    
T  38667221 agctataaactaacttttttgtgttaccaaaca 38667189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 45900347 - 45900303
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta 150  Q
    |||||||||||| |||| ||||| |||||||||| ||||||||||    
T  45900347 ttggaagaaaatataaaaagctaccagctataagctaaaaagcta 45900303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 273
Target Start/End: Original strand, 46350849 - 46350938
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtc 273  Q
    ||||||||| || ||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||    
T  46350849 gttaccaaacacgtcatgttttcatctaacgagcttataaactaatccaacaagctataagctaacttttttgtgttaccaaacacagtc 46350938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 98 - 274
Target Start/End: Complemental strand, 981523 - 981333
Alignment:
Q  98 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctcnnnnnnnnctataagctcgt----------- 185  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||| |||| |||||||||||||||        ||||||||||||               
T  981523 ggttattattggaagaaaatgtaaaaagctgtcaactataagataaaaggctacttgaaatagcttctcaaaaaaagctataagctcgtgaaaaaagctt 981424  T
Q  186 --taccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtca 274  Q
      || |||| |||||| |||||||| |||| ||||||||| ||  |||||||| ||||||||||||||||||||||||||||||| |||||    
T  981423 gttatcaaacacatcacgttttcattcaactagcttataagctaatccaacaaactataagctaacttttttgtgttaccaaacacagtca 981333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 6477012 - 6476928
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||  ||||| ||||||||||||| ||||||||||||||||||||    
T  6477012 gttaccaaacacatcacgttttcatccaacaagcttataagctaatccaagaagctataagctagcttttttgtgttaccaaaca 6476928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 46534494 - 46534410
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||| | |||||| ||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  46534494 gttaccatacacatcacgttttcatccaacaagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 46534410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 21920803 - 21920893
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| |||||| |||||||| |||| ||||||||| || |||||||||||||||||||| ||| ||||||||||||||||    
T  21920803 aagcttgttaccaaacacatcacgttttcattcaactagcttataagctagtccaacaagctataagctagcttatttgtgttaccaaaca 21920893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 46349891 - 46349981
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||| |||||||| | || |||||||||||||||||||||||||  |  ||||| ||||||||||||| ||||||||||||||||||||    
T  46349891 aagctcattaccaaacatattatgttttcatccaacaagcttataagttaatccaagaagctataagctagcttttttgtgttaccaaaca 46349981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 185 - 268
Target Start/End: Original strand, 43158206 - 43158290
Alignment:
Q  185 ttaccaaatacatcatgttttcatccaacaagcttataaactggtccaaca-agctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||| |||||| ||||||||||||| ||||||||||||  || |||| || ||||||||||||||||||||||||||||||    
T  43158206 ttaccaaacacatcacgttttcatccaacgagcttataaactaatctaacagagatataagctaacttttttgtgttaccaaaca 43158290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 3370541 - 3370451
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| |||||| ||||||||||||||| ||||||||||  ||||| || ||||||  |||||||||||| ||||||||||    
T  3370541 aagcttgttaccaaacacatcacgttttcatccaacaaacttataaactaatccaaaaaactataaattaacttttttgtattaccaaaca 3370451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 14792130 - 14792212
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaa 266  Q
    ||||||||| |||||| ||||| ||||||| ||||||||| ||  || |||||||||||||||||||| ||||||||||||||    
T  14792130 gttaccaaacacatcacgttttaatccaacgagcttataagctaatctaacaagctataagctaacttatttgtgttaccaaa 14792212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 27826801 - 27826711
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  27826801 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 27826711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 28494283 - 28494373
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  28494283 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 28494373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 42329030 - 42329120
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  42329030 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 42329120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 42997606 - 42997516
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| |||||| ||||||||||||| ||||||||| || ||||||||| ||||||  ||||||||| ||||||| |||||    
T  42997606 aagcttgttaccaaacacatcacgttttcatccaacgagcttataagctagtccaacaaactataaagtaactttttagtgttactaaaca 42997516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 30582730 - 30582673
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  30582730 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 30582673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 35670394 - 35670451
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  35670394 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 35670451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 37658155 - 37658212
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  37658155 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 37658212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 40061222 - 40061165
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  40061222 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 40061165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 42265286 - 42265370
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| || ||| ||||||||| ||| ||||||||| ||  ||||||||||||||||||| |||||||| |||||||||||    
T  42265286 gttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttttttgagttaccaaaca 42265370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 48935321 - 48935237
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| || ||| ||||  ||||||| ||||||||||||  ||||||||||||||||||| ||| ||||||||||||||||    
T  48935321 gttaccaaacacgtcacgtttctatccaacgagcttataaactaatccaacaagctataagctagcttatttgtgttaccaaaca 48935237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 4060444 - 4060354
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  |||||||| |||||||||| ||||||||||||||||||||    
T  4060444 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaaactataagctagcttttttgtgttaccaaaca 4060354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 6243959 - 6243869
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||| ||| |||| |||||||||||||||    
T  6243959 aagctcgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataaactagctttgttgtgttaccaaaca 6243869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 28958129 - 28958219
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| |||||||||  |  ||||||||||||||||||| ||||||||||||||||||||    
T  28958129 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagttaatccaacaagctataagctagcttttttgtgttaccaaaca 28958219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 31226878 - 31226968
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || |||  |||||||| ||  ||||||||||||  | ||||||| ||||||||||||||||||||||||||||||    
T  31226878 aagcttgttaccaaacacgtcacattttcatctaatgagcttataaactaattcaacaagttataagctaacttttttgtgttaccaaaca 31226968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 35647508 - 35647418
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || |||  |||||||| ||| ||||||||| |   ||||||||||||||||||| ||||||||||||||||||||    
T  35647508 aagcttgttaccaaacacgtcacattttcatctaacgagcttataagcaaatccaacaagctataagctagcttttttgtgttaccaaaca 35647418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 43156636 - 43156570
Alignment:
Q  202 ttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  43156636 ttttcatctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 43156570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 9806629 - 9806686
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||| ||||||||||| ||||||||||||    
T  9806629 aacaagcttataagctagtccaacaagctataaactaacttttttatgttaccaaaca 9806686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 31969506 - 31969563
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||  | ||||||||| |||||||||||||||||||||||||||||||    
T  31969506 aacaagcttataagttagtccaacaatctataagctaacttttttgtgttaccaaaca 31969563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 35747084 - 35747027
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| |||||||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  35747084 aacaatcttataaacttgtcgaacaagctataagctagcttttttgtgttaccaaaca 35747027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 44570987 - 44570934
Alignment:
Q  215 agcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| || |||||| ||||||||||||||||||||||||||||||||||    
T  44570987 agcttataagctagtccaataagctataagctaacttttttgtgttaccaaaca 44570934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 42329597 - 42329652
Alignment:
Q  213 caagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||| |||||||||||||||||||   |||||||||||||||||||    
T  42329597 caagcttataaactagtccaacaagctataagctggtttttttgtgttaccaaaca 42329652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 25696125 - 25696035
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| ||||||||||||| ||||||||| ||  || ||||||||||||||||  || ||| ||||||||||||    
T  25696125 aagcttgttaccaaacacgtcacgttttcatccaacgagcttataagctaatctaacaagctataagctagtttatttatgttaccaaaca 25696035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 28235377 - 28235287
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| ||||||||||||| ||||||||| ||  |||||||| |||||||||| ||| ||| ||||| ||||||    
T  28235377 aagcttgttaccaaacacgtcacgttttcatccaacgagcttataagctaatccaacaaactataagctagcttatttatgttatcaaaca 28235287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 30523967 - 30524049
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaa 266  Q
    ||||||| | |||||| ||||||||||||||||||||| |  |  ||||||||||||||||||| ||| ||||||| ||||||    
T  30523967 gttaccatacacatcacgttttcatccaacaagcttatgagttaatccaacaagctataagctagcttatttgtgtcaccaaa 30524049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 46536214 - 46536124
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| || |||||| ||  |||||||||||| |||||| ||||||||||||||||||||    
T  46536214 aagcttgttaccaaacacgccacgttttcatctaacgagtttataagctaatccaacaagctacaagctagcttttttgtgttaccaaaca 46536124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 46672598 - 46672508
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || |||  |||||||| ||| ||||||||| ||  ||||||||| ||||||||| ||||||||||||| ||||||    
T  46672598 aagcttgttaccaaacacgtcacattttcatctaacgagcttataagctaatccaacaagttataagctagcttttttgtgttatcaaaca 46672508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 42997700 - 42997635
Alignment:
Q  98 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    ||||||||||||||||||||||||| || ||||||||||| | |||||||||| ||||| ||||||    
T  42997700 ggttattattggaagaaaatgtaaaaagttatcagctatatggtaaaaagctacttgaattagctt 42997635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 273
Target Start/End: Complemental strand, 43337702 - 43337630
Alignment:
Q  201 gttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtc 273  Q
    |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||| |||||||||||| ||||    
T  43337702 gttttcgtctaacgagcttataagctaatccaacaagctataagctagcttttttatgttaccaaacacagtc 43337630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 39870061 - 39870116
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaa 266  Q
    ||||||||||||| ||  |||||||| |||||||||| ||||||||||||||||||    
T  39870061 aacaagcttataagctaatccaacaaactataagctagcttttttgtgttaccaaa 39870116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 31031901 - 31031991
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||  ||| |||||||||  |  ||||||||||||||| ||| ||||||||||||||||||||    
T  31031901 aagcttgttaccaaacacgccacgttttcatttaacgagcttataagttaatccaacaagctataaactagcttttttgtgttaccaaaca 31031991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 1602166 - 1602223
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||| || |||||| ||||||    
T  1602166 aacaagcttataagctagtccaacaagctataagctatcttattcgtgttatcaaaca 1602223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 8932540 - 8932597
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||| ||||| |||| || ||||||||||||||||    
T  8932540 aacaagcttataagctagtccaacaagttataaactaatttatttgtgttaccaaaca 8932597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 27826887 - 27826830
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  27826887 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 27826830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 28958043 - 28958100
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  28958043 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 28958100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 30999384 - 30999441
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||| | || |||||| ||||||||| ||||||| ||||||||||||||||    
T  30999384 aacaagcttatgagctagtccaataagctataaactaacttatttgtgttaccaaaca 30999441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 31436287 - 31436344
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||| ||||||  | |||||||||||||||||||| |||||||||||||| |||||    
T  31436287 aacaagtttataagttagtccaacaagctataagctagcttttttgtgttacgaaaca 31436344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 260
Target Start/End: Complemental strand, 31619564 - 31619515
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgtt 260  Q
    ||||||||||||| || |||||||||||||||| ||| ||||||||||||    
T  31619564 aacaagcttataagctagtccaacaagctataaactagcttttttgtgtt 31619515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 35647594 - 35647537
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagct-attgaaatagctt 162  Q
    |||||||||||| |||| |||||||||||||||| |||||||||  ||||||||||||    
T  35647594 ttggaagaaaatataaaaagctatcagctataagctaaaaagctgcttgaaatagctt 35647537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 36121490 - 36121433
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| ||  ||||| ||||||||||||| ||| ||||||||||||||||    
T  36121490 aacaagcttataagctaatccaataagctataagctatcttctttgtgttaccaaaca 36121433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 42328085 - 42328142
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  42328085 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 42328142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 42826043 - 42826002
Alignment:
Q  227 ggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  42826043 ggtccaacaagctataaactaacttatttgtgttaccaaaca 42826002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 43544936 - 43544993
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || ||||||||||||||||| || ||| || |||||||||||||    
T  43544936 aacaagcttataagctagtccaacaagctataagttagcttattcgtgttaccaaaca 43544993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 44104617 - 44104678
Alignment:
Q  212 acaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtc 273  Q
    ||||||||||||  | ||||||||| |||||||||| ||||||| |||||||||||| ||||    
T  44104617 acaagcttataagtttgtccaacaaactataagctagcttttttttgttaccaaacacagtc 44104678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 46536300 - 46536243
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  46536300 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 46536243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 44103926 - 44103886
Alignment:
Q  22 aaaaacaaaacgtgagtgagtgggacggttgatttgtttac 62  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  44103926 aaaaacaaaacgtgaatgagtgggacggttgctttgtttac 44103886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 30523876 - 30523919
Alignment:
Q  107 tggaagaaaatgtaaagagctatcagctataagataaaaagcta 150  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||    
T  30523876 tggaataaaatgtaaaaagctatcagctataagctaaaaagcta 30523919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 31030804 - 31030863
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacata 270  Q
    ||||||||||||| || ||||||||| ||||||  || ||||||| ||||||||||||||    
T  31030804 aacaagcttataagctagtccaacaaactataaattagcttttttatgttaccaaacata 31030863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 276
Target Start/End: Original strand, 46615709 - 46615784
Alignment:
Q  201 gttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtcata 276  Q
    ||||||||| ||| ||||||||| ||  || ||||| ||||||  || |||||||||||||||||||| |||||||    
T  46615709 gttttcatctaacgagcttataagctaatctaacaaactataaattagcttttttgtgttaccaaacacagtcata 46615784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 3370628 - 3370570
Alignment:
Q  105 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    ||||||||||||| |||| ||||| |||||||||| | |||||||| ||||||||||||    
T  3370628 attggaagaaaatataaaaagctaccagctataagctcaaaagctacttgaaatagctt 3370570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 29994223 - 29994313
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  || ||||| |||||||| | ||||||| ||||||||||||    
T  29994223 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatctaacaaactataagcgagcttttttatgttaccaaaca 29994313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 46349804 - 46349862
Alignment:
Q  105 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    ||||||||||||| |||| ||||| |||||||||| | |||||||| ||||||||||||    
T  46349804 attggaagaaaatataaaaagctaccagctataagctcaaaagctacttgaaatagctt 46349862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 46350757 - 46350811
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatag 159  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| |||||||||    
T  46350757 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatag 46350811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 1602024 - 1602076
Alignment:
Q  215 agcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| || |||||||||||||||||||| | ||||| ||||||||||||    
T  1602024 agcttataagctagtccaacaagctataagctagc-tttttatgttaccaaaca 1602076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 4060530 - 4060473
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| || || |||||||||| |||||||||| ||||||||||||    
T  4060530 ttggaagaaaatataaaaagttaccagctataagctaaaaagctacttgaaatagctt 4060473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 28494197 - 28494254
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| |||| |||||||    
T  28494197 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgatatagctt 28494254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 29994137 - 29994194
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| | ||| |||||||||| |||||||||| ||||||||||||    
T  29994137 ttggaagaaaatataaaaaactaccagctataagctaaaaagctacttgaaatagctt 29994194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 31031815 - 31031872
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| ||| |||||| |||||||||| ||||||||||||    
T  31031815 ttggaagaaaatataaaaagctaccagttataagctaaaaagctacttgaaatagctt 31031872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 31226792 - 31226849
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||| ||| ||||||||||||    
T  31226792 ttggaagaaaatataaaaagctaccagctataagctaaaaaactacttgaaatagctt 31226849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 33979795 - 33979734
Alignment:
Q  105 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 165  Q
    ||||||||||||| |||| |  ||||||||||||| | |||||||| |||||||||||||||    
T  33979795 attggaagaaaatataaaaaagtatcagctataagctcaaaagctacttgaaatagcttctc 33979734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 33982355 - 33982412
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || ||| |||||||||||||||| ||| || |||| ||||||||    
T  33982355 aacaagcttataagctagtctaacaagctataagctagcttattcgtgtcaccaaaca 33982412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 41406247 - 41406190
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||  | |||||| ||||||||||||| ||| || |||||||||||||    
T  41406247 aacaagcttataagatagtccaataagctataagctagcttattcgtgttaccaaaca 41406190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 42328221 - 42328282
Alignment:
Q  207 atccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||||||| ||  | |||| |||||||||||| ||||||  ||||||||||||    
T  42328221 atccaacaagcttataagctaattcaactagctataagctagctttttgttgttaccaaaca 42328282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 42328944 - 42329001
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| | ||| |||||||||| |||||||||| ||||||||||||    
T  42328944 ttggaagaaaatataaaaaactaccagctataagctaaaaagctacttgaaatagctt 42329001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 42825914 - 42825857
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||| | |||||| ||| ||||||| ||||| || |||||||||||||    
T  42825914 aacaagcttataaattagtccaataaggtataagcgaacttattcgtgttaccaaaca 42825857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 43337811 - 43337754
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||| ||| ||||||||||||    
T  43337811 ttggaagaaaatataaaaagctaccagctataagctaaaaaactatttgaaatagctt 43337754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 44818780 - 44818723
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||| |||||| || |||||||||  ||||||||| ||||||| ||||||||||||    
T  44818780 aacaagtttataagctagtccaacaaattataagctagcttttttatgttaccaaaca 44818723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 46672684 - 46672627
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| || |||||| |||||| |||||||||| ||||||||||||    
T  46672684 ttggaagaaaatataaaaagttatcagttataagctaaaaagctacttgaaatagctt 46672627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 33979675 - 33979619
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaac 267  Q
    |||| ||||||||  | |||||||||||||||||||| ||| || ||||||||||||    
T  33979675 aacatgcttataaggtagtccaacaagctataagctagcttattcgtgttaccaaac 33979619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 44103850 - 44103782
Alignment:
Q  98 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 165  Q
    |||| |||||||||||||||||||| ||| ||||  |||||  ||||||| || |||||||||||||||    
T  44103850 ggttgttattggaagaaaatgtaaaaagccatcaattataaactaaaaaggtacttgaaatagcttctc 44103782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 273
Target Start/End: Original strand, 7157505 - 7157600
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtc 273  Q
    ||||| |||||||||  ||||| |||||||||||||||||||||||  | |||||||||||||||||||| |||||||||||||||||||| ||||    
T  7157505 aagcttgttaccaaacgcatcacgttttcatccaacaagcttataagttagtccaacaagctataagctagcttttttgtgttaccaaacacagtc 7157600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 36959542 - 36959468
Alignment:
Q  194 acatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||||||||||||||| |||||| ||  |||||||||||||||| ||||||||||||||||||||    
T  36959542 acatcatgttttcatccaacaagcttgtaaactagtttaacaagctataagctagcttttttgtgttaccaaaca 36959468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 6789621 - 6789711
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  6789621 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 6789711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 27813008 - 27813098
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||||||  | ||||||||||||||||| ||||||||||||||||||||    
T  27813008 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataaactaattcaacaagctataagctagcttttttgtgttaccaaaca 27813098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 34589933 - 34590023
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  |||||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  34589933 aagcttgttaccaaacacgccatgttttcatctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 34590023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 35766651 - 35766561
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||| ||  ||||| ||||||||||||| ||||||||| ||| ||||||    
T  35766651 aagcttgttaccaaacacatcacgttttcatccaacaagcttataagctaatccaagaagctataagctagcttttttgtattatcaaaca 35766561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 196 - 268
Target Start/End: Original strand, 36944265 - 36944337
Alignment:
Q  196 atcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||||||||||||||||||  | ||| |||||||||||||||| ||||||| ||||||||||||    
T  36944265 atcatgttttcatccaacaagcttataagttagtctaacaagctataagctagcttttttatgttaccaaaca 36944337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 182 - 268
Target Start/End: Original strand, 5050113 - 5050199
Alignment:
Q  182 tcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||| || ||| ||||||||||||| ||||||||| ||  ||||||||||||||||||| ||| ||| ||||||||||||    
T  5050113 tcgttaccaaacacgtcacgttttcatccaacgagcttataagctaatccaacaagctataagctagcttatttatgttaccaaaca 5050199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 13359488 - 13359578
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| ||||||||| ||||||||||||| ||  |||||||||||||| |||| ||||||||||||| ||||||    
T  13359488 aagcttgttaccaaacacgtcacgttttcatctaacaagcttataagctaatccaacaagctatatgctagcttttttgtgttatcaaaca 13359578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 15498737 - 15498647
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  15498737 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 15498647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 16218315 - 16218405
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  16218315 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 16218405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 24171457 - 24171367
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| | ||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  24171457 aagcttgttaccaaacacgtcacgatttcatctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 24171367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 29525328 - 29525418
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  29525328 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 29525418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 37530752 - 37530842
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  37530752 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 37530842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 41734276 - 41734366
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  41734276 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 41734366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 42709403 - 42709313
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  42709403 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 42709313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 1924004 - 1923949
Alignment:
Q  213 caagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  1924004 caagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 1923949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 107 - 268
Target Start/End: Original strand, 2890896 - 2891071
Alignment:
Q  107 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctcnnnnnnnnctataagctcg-------------ttaccaaa 192  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||||||||| |||||        |||||||||||             ||| ||||    
T  2890896 tggaagaaaatgtaaaaagctatcagctataagctaaaaagctatttgaaatagtttctcaaaaaaagctataagctcgtgagaaaagtttattatcaaa 2890995  T
Q  193 tacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
     ||||||  ||||||||||||||||||||||  | ||||||||| ||||||||||  || ||||||||||||||||    
T  2890996 cacatcacattttcatccaacaagcttataagttagtccaacaaactataagctagattatttgtgttaccaaaca 2891071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 7615009 - 7615099
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  |||||||||||| ||| ||||||||| ||  |||||||||||||||| || ||||||||| ||||||||||    
T  7615009 aagcttgttaccaaacacgccatgttttcatctaacgagcttataagctaatccaacaagctataaggtagcttttttgtattaccaaaca 7615099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 10815155 - 10815065
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||| ||| || |||| |||||||| ||| ||||||||| ||  |||||||| |||||||||| ||||||||||||||||||||    
T  10815155 aagcttgttactaaacacgtcatattttcatctaacgagcttataagctaatccaacaaactataagctagcttttttgtgttaccaaaca 10815065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 12280873 - 12280783
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  |||||||| |||||||||| ||||||||||||||||||||    
T  12280873 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaaactataagctagcttttttgtgttaccaaaca 12280783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 36761154 - 36761064
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  |||||||| |||||||||| ||||||||||||||||||||    
T  36761154 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaacctataagctagcttttttgtgttaccaaaca 36761064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 36959767 - 36959717
Alignment:
Q  12 cagagaagagaaaaacaaaacgtgagtgagtgggacggttgatttgtttac 62  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  36959767 cagagaagaggaaaacaaaacgtgagtgagtgggacggttgctttgtttac 36959717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 3078581 - 3078638
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||| |||||| || |||||||||| ||||||||||||||||||||||||||||||    
T  3078581 aacaagtttataagctagtccaacaagttataagctaacttttttgtgttaccaaaca 3078638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 11575681 - 11575624
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  11575681 aacaaacttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 11575624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 4559521 - 4559577
Alignment:
Q  212 acaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||| || |||||||||||||||||||| ||||||| ||||||||||||    
T  4559521 acaagcttataagcttgtccaacaagctataagctagcttttttatgttaccaaaca 4559577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 5102716 - 5102800
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||| |||| |||||||||||| ||||||||| ||||||| || ||||||||| ||||| |||| ||| || |||||||||||||    
T  5102716 gttatcaaacacatcatgttttgatccaacaaacttataagctagtccaacaatctatacgctagcttattcgtgttaccaaaca 5102800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 36959681 - 36959613
Alignment:
Q  98 ggttattattggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 165  Q
    ||||||||||||||||||||||||| ||||||||| |||||  ||||||| || |||||||||||||||    
T  36959681 ggttattattggaagaaaatgtaaaaagctatcagttataaactaaaaagttacttgaaatagcttctc 36959613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 11784224 - 11784295
Alignment:
Q  202 ttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtc 273  Q
    |||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||| |||||||||||| ||||    
T  11784224 ttttcatctaacgagcttataagctaatccaacaagctataagctagcttttttatgttaccaaacacagtc 11784295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 76506 - 76416
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||| ||||||||||||| ||||||||||||| ||||||    
T  76506 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaaaaagctataagctagcttttttgtgttatcaaaca 76416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 17645398 - 17645308
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| ||||||||||||| | ||||||| ||  || |||||||||||||||| ||| ||| ||||||||||||    
T  17645398 aagcttgttaccaaacacgtcacgttttcatccaacgaacttataagctaatctaacaagctataagctagcttatttatgttaccaaaca 17645308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 76592 - 76535
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| |||||||||||||||| |||||||||| ||||||||||||    
T  76592 ttggaagaaaatataaaaagctatcagctataagctaaaaagctacttgaaatagctt 76535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 3033448 - 3033395
Alignment:
Q  215 agcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||    
T  3033448 agcttataagctagtccaacaagctataagctagcttttttatgttaccaaaca 3033395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 13019053 - 13018996
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||| || |||||||||| ||||||||| ||||||||||||||||||||    
T  13019053 aacaaacttataagctagtccaacaagttataagctagcttttttgtgttaccaaaca 13018996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 41734190 - 41734247
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| |||||||||||||||| |||||||||| ||||||||||||    
T  41734190 ttggaagaaaatataaaaagctatcagctataagctaaaaagctacttgaaatagctt 41734247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 20017346 - 20017402
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaac 267  Q
    ||||||||||||| || ||||||||||||||||||||  |||||||||||| |||||    
T  20017346 aacaagcttataagctagtccaacaagctataagctagtttttttgtgttatcaaac 20017402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 25881593 - 25881509
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| || ||| ||||||||||||| ||||||||| ||  || |||||||||||||||| | | ||| ||||||||||||    
T  25881593 gttaccaaacacgtcacgttttcatccaacgagcttataagctaatctaacaagctataagctagcctatttatgttaccaaaca 25881509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 17540347 - 17540280
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaactt 251  Q
    ||||||||| || ||| ||||| ||||||| ||||||||| ||  |||||||||||||||||||||||    
T  17540347 gttaccaaacacgtcacgttttaatccaacgagcttataagctaatccaacaagctataagctaactt 17540280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 23590731 - 23590641
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| || |||||| ||  ||||||||| ||||| ||| ||||||||||||||||||||    
T  23590731 aagcttgttaccaaacacgccacgttttcatctaacgagtttataagctaatccaacaagttataaactatcttttttgtgttaccaaaca 23590641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 8520556 - 8520499
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || ||||||||||||||||| || ||| || |||||||||||||    
T  8520556 aacaagcttataagctagtccaacaagctataagttagcttattcgtgttaccaaaca 8520499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 10815241 - 10815184
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  10815241 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 10815184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 12939912 - 12939977
Alignment:
Q  201 gttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaa 266  Q
    ||||||||| ||| ||||||||| ||  ||||||||  ||||||||| ||||||||||||||||||    
T  12939912 gttttcatctaacgagcttataagctaatccaacaaattataagctagcttttttgtgttaccaaa 12939977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 12953862 - 12953927
Alignment:
Q  201 gttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaa 266  Q
    ||||||||| ||| ||||||||| ||  ||||||||  ||||||||| ||||||||||||||||||    
T  12953862 gttttcatctaacgagcttataagctaatccaacaaattataagctagcttttttgtgttaccaaa 12953927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 15498823 - 15498766
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  15498823 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 15498766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 20768908 - 20768965
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||  | ||||||||| |||||| |||||||||||||||| |||||||    
T  20768908 aacaagcttataagatagtccaacaaactataaactaacttttttgtgttgccaaaca 20768965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 27812922 - 27812979
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| |||||||||||||||| ||||||| || ||||||||||||    
T  27812922 ttggaagaaaatataaaaagctatcagctataagctaaaaagttacttgaaatagctt 27812979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 29525242 - 29525299
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  29525242 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 29525299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 36761240 - 36761183
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  36761240 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 36761183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 37530666 - 37530723
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  37530666 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 37530723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 42709489 - 42709432
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  42709489 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 42709432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 24463603 - 24463519
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||||||||||| ||||||||| ||||||| ||  | ||| || |||||||||| ||| |   ||||||||||||    
T  24463603 gttaccaaatacatcatgttttgatccaacaaacttataagctaattcaataacctataagctagcttctcgttgttaccaaaca 24463519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 42422876 - 42422809
Alignment:
Q  201 gttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| ||| |||||||||  |  | ||||||||||||| ||| ||||||||||||||||||||    
T  42422876 gttttcatctaacgagcttataagttaattcaacaagctataaactagcttttttgtgttaccaaaca 42422809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 35638832 - 35638766
Alignment:
Q  202 ttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||| ||| |||||||||  |  |||||||| ||||||||||  |||||||||||||||||||    
T  35638832 ttttcatctaacgagcttataagttaatccaacaaactataagctagtttttttgtgttaccaaaca 35638766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 35638942 - 35638896
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagctatt 152  Q
    |||||||||||| |||| |||||||||||||||| |||||| |||||    
T  35638942 ttggaagaaaatataaaaagctatcagctataagctaaaaaactatt 35638896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 6789535 - 6789592
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| | ||| |||||||||| |||||||||| ||||||||||||    
T  6789535 ttggaagaaaatataaaaaactaccagctataagctaaaaagctacttgaaatagctt 6789592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 7614923 - 7614976
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaata 158  Q
    ||||||| |||| |||| ||||| ||||||||||||||||||||| ||||||||    
T  7614923 ttggaagcaaatataaaaagctaccagctataagataaaaagctacttgaaata 7614976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 8520622 - 8520569
Alignment:
Q  215 agcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| || ||| ||||||||||| |||| ||||||| ||||||||||||    
T  8520622 agcttataagctagtctaacaagctatatgctagcttttttatgttaccaaaca 8520569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 12280959 - 12280902
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| || |||||||||    
T  12280959 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttaaaatagctt 12280902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 12939803 - 12939860
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| | ||| |||||||||| |||||||||| ||||||||||||    
T  12939803 ttggaagaaaatataaaaaactaccagctataagttaaaaagctatttgaaatagctt 12939860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 12953753 - 12953810
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| | ||| |||||||||| |||||||||| ||||||||||||    
T  12953753 ttggaagaaaatataaaaaactaccagctataagctaaaaagctatttgaaatagctt 12953810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 13359402 - 13359459
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| ||||||| || ||||||||||||    
T  13359402 ttggaagaaaatataaaaagctaccagctataagctaaaaagttacttgaaatagctt 13359459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 23590817 - 23590760
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||||||||| |||| ||||| |||| ||||||||||||    
T  23590817 ttggaagaaaatataaaaagctatcagctgtaagctaaaatgctacttgaaatagctt 23590760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 24171543 - 24171486
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| |||||  ||||||||| |||||||||| ||||||||||||    
T  24171543 ttggaagaaaatataaaaagctactagctataagttaaaaagctacttgaaatagctt 24171486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 34589847 - 34589904
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||| ||| ||||||||||||    
T  34589847 ttggaagaaaatataaaaagctaccagctataagctaaaaaactacttgaaatagctt 34589904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 42422987 - 42422930
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| | |||||||| |||||||||| ||||||||||||    
T  42422987 ttggaagaaaatataaaaagctaccggctataagctaaaaagctacttgaaatagctt 42422930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 3703538 - 3703454
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||| |||| || ||| |||||||||||| |||||||||| ||  |  |||||||||||| ||| ||| ||| ||||||||||||    
T  3703538 gttatcaaacacgtcacgttttcatccaataagcttataagctaatataacaagctataaactagcttatttatgttaccaaaca 3703454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 185 - 268
Target Start/End: Complemental strand, 10361478 - 10361395
Alignment:
Q  185 ttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||| |||||||||||||||||||  ||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  10361478 ttaccaaacacatcatgttttcatccaatgagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 10361395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 6432262 - 6432174
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaa 266  Q
    ||||| ||||||||| |||||| ||||||||||||| ||||||||| || |||||||||||||||||||| ||| ||||||||||||||    
T  6432262 aagcttgttaccaaacacatcacgttttcatccaactagcttataagctagtccaacaagctataagctagcttatttgtgttaccaaa 6432174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 106 - 268
Target Start/End: Original strand, 11017966 - 11018129
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctcnnnnnnnnctataagctcgttaccaaatacatcatgttt 204  Q
    |||||| ||||| |||| ||||   ||||||||| |||||| ||| |||||||||||| ||        ||||||||||||||||||| ||  || ||||    
T  11017966 ttggaataaaatataaaaagctgctagctataagctaaaaaactacttgaaatagcttttcaaaaaacgctataagctcgttaccaaacacgccacgttt 11018065  T
Q  205 tcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  11018066 tcatctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 11018129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 42097919 - 42098009
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| |||||| |||||||||||| |||||||||| ||  ||||| ||||||||||||| ||||||||||||||||||||    
T  42097919 aagcttgttaccaaacacatcacgttttcatccaataagcttataagctaatccaagaagctataagctagcttttttgtgttaccaaaca 42098009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 43568455 - 43568365
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| ||||||||||||| ||||||||| ||  |||||||||||||||| |||||||||||||||||||||||    
T  43568455 aagcttgttaccaaacacgtcacgttttcatccaacgagcttataagctaatccaacaagctataagttaacttttttgtgttaccaaaca 43568365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 45377001 - 45376911
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| |||||| ||||||||||||| ||||||||| || |||||||||||||||| ||| ||| ||||||||||||||||    
T  45377001 aagcttgttaccaaacacatcacgttttcatccaactagcttataagctagtccaacaagctataaactagcttatttgtgttaccaaaca 45376911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 8875765 - 8875675
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||    
T  8875765 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagttataagctaacttttttgtgttaccaaaca 8875675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 273
Target Start/End: Original strand, 39241174 - 39241263
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtc 273  Q
    ||||||||| || ||| ||||||||| ||| ||||||||| ||  ||||||||||||||||||| |||||||||||||||||||| ||||    
T  39241174 gttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacagtc 39241263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 16496646 - 16496713
Alignment:
Q  201 gttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| ||| ||||||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  16496646 gttttcatctaacgagcttataaactaatccaacaagctataagctagcttttttgtgttaccaaaca 16496713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 12160921 - 12161011
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  12160921 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 12161011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 30523701 - 30523611
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  30523701 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 30523611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 36936080 - 36936170
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||| ||||||||||||    
T  36936080 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttttttttgttaccaaaca 36936170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 42519806 - 42519716
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||| ||  | ||||||||||||||||| ||||||||||||||||||||    
T  42519806 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataagctaatgcaacaagctataagctagcttttttgtgttaccaaaca 42519716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 7183322 - 7183379
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  7183322 aacaagcttataaactagtccaacaaactataagctagcttttttgtgttaccaaaca 7183379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 10247423 - 10247480
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  10247423 aacaagcttataagctagtccaacaaactataagctaacttttttgtgttaccaaaca 10247480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 18109755 - 18109812
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  18109755 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 18109812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 1876040 - 1876130
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  |||||||| |||||||||| ||||||||||||||||||||    
T  1876040 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaaactataagctagcttttttgtgttaccaaaca 1876130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 34245338 - 34245248
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| | | || ||||||||| ||| ||||||||| ||  ||||||||||||||||||| ||||||| ||||||||||||    
T  34245338 aagcttgttaccaaacaaaccacgttttcatctaacgagcttataagctaatccaacaagctataagctagcttttttatgttaccaaaca 34245248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 39532121 - 39532064
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||| || ||||||||||||||||||||| |||||||||||||||||||    
T  39532121 aacaaacttataagctagtccaacaagctataagctaatttttttgtgttaccaaaca 39532064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 33179020 - 33178956
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatagtcat 275  Q
    ||||||||||||| || |||||||||||||||||||| ||| || ||||||||||||| ||||||    
T  33179020 aacaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaacacagtcat 33178956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 15265381 - 15265440
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacata 270  Q
    ||||||||||||| || | |||| ||||||||||||||||| ||||||||||||||||||    
T  15265381 aacaagcttataagctagcccaagaagctataagctaacttatttgtgttaccaaacata 15265440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 14958212 - 14958122
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| ||||||||| ||| ||||||||||||  |||||||||||||||  || ||| ||||| ||||||||||    
T  14958212 aagcttgttaccaaacacgtcacgttttcatctaacgagcttataaactaatccaacaagctataaattagcttctttgtattaccaaaca 14958122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 35422135 - 35422045
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| |||||| ||||||| |||||||| |||||| ||  ||||| || |||||| ||| |||||||||||||| |||||    
T  35422135 aagcttgttaccaaacacatcacgttttcaaccaacaagtttataagctaatccaaaaaactataaactagcttttttgtgttactaaaca 35422045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 26340074 - 26340131
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||| |||||| || ||||||||||||||||||||    
T  26340074 aacaagcttataagctagtccaacaagttataagttagcttttttgtgttaccaaaca 26340131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 38928534 - 38928587
Alignment:
Q  215 agcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||    
T  38928534 agcttataagctagtccaacaagctataagctagcttttttatgttaccaaaca 38928587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 3147533 - 3147449
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| || |||  ||||||||||| |||||||||| ||  || |||||| ||||||||||||| ||| ||||||||||||    
T  3147533 gttaccaaacacgtcacattttcatccaagaagcttataagctaatctaacaagttataagctaacttatttatgttaccaaaca 3147449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 43496248 - 43496164
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||| || ||| ||||||||||||| ||||||||| ||  | ||||||||||||||||| ||| ||| ||||||||||||    
T  43496248 gttactaaacacgtcacgttttcatccaacgagcttataagctaatgcaacaagctataagctagcttatttatgttaccaaaca 43496164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 5774179 - 5774096
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaac 267  Q
    ||||||||| ||  || ||||||||| ||||||||||||| ||  ||||||||||||||| ||| ||||||||| ||| |||||    
T  5774179 gttaccaaacacgccacgttttcatctaacaagcttataagctaatccaacaagctataaactagcttttttgtattatcaaac 5774096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 268
Target Start/End: Original strand, 8341198 - 8341252
Alignment:
Q  214 aagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||| || |||||||||| ||||||||| ||| ||||||||||||||||    
T  8341198 aagcttataagctagtccaacaagttataagctagcttatttgtgttaccaaaca 8341252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 1875954 - 1876011
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  1875954 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 1876011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 5774271 - 5774214
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  5774271 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 5774214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 7454710 - 7454653
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  7454710 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 7454653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 8875851 - 8875794
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  8875851 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 8875794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 12160835 - 12160892
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  12160835 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 12160892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 14452359 - 14452302
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||  || |||||||||||||    
T  14452359 aacaagcttataagctagtccaacaagctataagctagctaattcgtgttaccaaaca 14452302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 14958298 - 14958241
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  14958298 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 14958241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 34245424 - 34245367
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||| ||| |||| |||||||||||||||| |||||||||| ||||||||||||    
T  34245424 ttggaagacaatataaaaagctatcagctataagttaaaaagctacttgaaatagctt 34245367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 36600996 - 36600939
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||| || |||||| ||||||    
T  36600996 aacaagcttataagctagtccaacaagctataagctagcttattcgtgttatcaaaca 36600939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 38324307 - 38324242
Alignment:
Q  201 gttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaa 266  Q
    ||||||||| ||| ||||||||| ||  | ||||||||||||||||| ||||||| ||||||||||    
T  38324307 gttttcatctaacgagcttataagctaattcaacaagctataagctagcttttttatgttaccaaa 38324242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 39241082 - 39241139
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  39241082 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 39241139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 40862244 - 40862300
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||| ||| | ||||||||||||||||||    
T  40862244 aacaagcttataagctagtccaacaagctataaactagc-tttttgtgttaccaaaca 40862300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 18239380 - 18239341
Alignment:
Q  229 tccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  18239380 tccaaaaaactataagctaacttttttgtgttaccaaaca 18239341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 10361570 - 10361512
Alignment:
Q  107 tggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttct 164  Q
    |||||||||||||||| |  ||||||||||||| |||||| ||| ||||||||||||||    
T  10361570 tggaagaaaatgtaaaaaattatcagctataagctaaaaaactacttgaaatagcttct 10361512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 1086102 - 1086045
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||  | ||  |||||||||||||||| ||| ||||||||||||||||    
T  1086102 aacaagcttataagttagtttaacaagctataagctagcttatttgtgttaccaaaca 1086045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 6319596 - 6319539
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||| ||||||| ||| ||  ||||||||||||    
T  6319596 aacaagcttataagctagtccaacaagctgtaagctagcttattcttgttaccaaaca 6319539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 6322180 - 6322237
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||| || ||| || |||||||||||||||||||| ||| || |||||||||||||    
T  6322180 aacaagtttctaagctagtccaacaagctataagctagcttattcgtgttaccaaaca 6322237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 11447299 - 11447242
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||| |||||| || ||||| |||||||||||||| ||| |||||||||| |||||    
T  11447299 aacaaggttataagctagtccagcaagctataagctagcttatttgtgttactaaaca 11447242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 16496537 - 16496594
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| ||||||||||  |||||||||||    
T  16496537 ttggaagaaaatttaaaaagctaccagctataagctaaaaagctacctgaaatagctt 16496594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 32482288 - 32482341
Alignment:
Q  214 aagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaac 267  Q
    |||||||||| || ||||| ||| |||||| ||| |||||||||||||||||||    
T  32482288 aagcttataagctagtccagcaaactataaactagcttttttgtgttaccaaac 32482341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 33182609 - 33182666
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||| || |||||||||||| ||| || |||||||||||||    
T  33182609 aacaagcttataagctagtcctacgagctataagctagcttattcgtgttaccaaaca 33182666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 36602772 - 36602829
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||| | || |||||||||||||||||||| ||| ||  ||||||||||||    
T  36602772 aacaagcttatcagctagtccaacaagctataagctagcttattaatgttaccaaaca 36602829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 36935994 - 36936051
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| | |||||||| |||||||||| ||||||||||||    
T  36935994 ttggaagaaaatataaaaagctacccgctataagctaaaaagctacttgaaatagctt 36936051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 38245940 - 38245997
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||  | |||||| || |||||||||| ||||||| ||||||||||||    
T  38245940 aacaagcttataagttagtccaataaactataagctagcttttttatgttaccaaaca 38245997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 38324416 - 38324359
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| ||| |||||| ||||||||||||    
T  38324416 ttggaagaaaatataaaaagctaccagctataagctaataagctacttgaaatagctt 38324359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 38928604 - 38928661
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || ||||||||| |||||||||| ||| ||  ||||||||||||    
T  38928604 aacaagcttataagctagtccaacaaactataagctagcttattcatgttaccaaaca 38928661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 42519892 - 42519835
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||| ||| ||||||||||||    
T  42519892 ttggaagaaaatataaaaagctaccagctataagctaaaaaactacttgaaatagctt 42519835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 44526027 - 44526084
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||| |||||| || ||||||||||||| |||||| ||| ||| ||||||||||||    
T  44526027 aacaagtttataagcttgtccaacaagctaaaagctagcttatttatgttaccaaaca 44526084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 7454624 - 7454556
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagct 246  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||    
T  7454624 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagct 7454556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 22707383 - 22707293
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||  || ||| ||||||||| ||| ||||||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  22707383 aagcttgttaccaatcacgtcacgttttcatctaacgagcttataaactaatccaacaagctataagctagcttttttgtgttaccaaaca 22707293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 25023462 - 25023552
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  25023462 aagcttgttaccaaacacgccacgttttcatctaacaagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 25023552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 24119246 - 24119336
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || ||| |||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  24119246 aagcttgttaccaaacacgtcacgttttcttctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 24119336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 1789846 - 1789789
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  1789846 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 1789789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 18368774 - 18368831
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  18368774 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 18368831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 6834059 - 6834143
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| |||||| ||||||||||||||||||||||| || || |||||| ||||||| || ||| ||| ||||||||||||    
T  6834059 gttaccaaacacatcacgttttcatccaacaagcttataagctagttcaacaaactataagatagcttatttatgttaccaaaca 6834143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 12130567 - 12130483
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| ||  || ||||||||| |||||  |||||| ||  ||||||||||||||||||||||||||||||||||||||||    
T  12130567 gttaccaaacacgccacgttttcatctaacaaatttataagctaatccaacaagctataagctaacttttttgtgttaccaaaca 12130483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 190982 - 190927
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaa 266  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||    
T  190982 aacaagcttataaactagtccaacaagctataaactaacttttttgtgttatcaaa 190927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 20645750 - 20645660
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| || |||  |||||||| ||| ||||||||| ||  |||||||| |||||||||| ||||||||||||||||||||    
T  20645750 aagcttgttaccaaacacgtcacattttcatctaacgagcttataagctaatccaacaaactataagctagcttttttgtgttaccaaaca 20645660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 18801759 - 18801702
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||  | |||||||||||||||||||| ||||||||||||||||||||    
T  18801759 aacaagcttataagttagtccaacaagctataagctagcttttttgtgttaccaaaca 18801702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 13756327 - 13756417
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  ||||||||||||||| ||| |||||| |||||||||||||    
T  13756327 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaagctataaactagctttttcgtgttaccaaaca 13756417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 20992272 - 20992362
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||  || ||||||||| ||| ||||||||| ||  |||||||| |||||| ||| ||||||||||||||||||||    
T  20992272 aagcttgttaccaaacacgccacgttttcatctaacgagcttataagctaatccaacaaactataaactagcttttttgtgttaccaaaca 20992362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 4976583 - 4976526
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||| |||||||||||  |||||||||||||||||||    
T  4976583 aacaagcttataagctagtccaacaggctataagctagtttttttgtgttaccaaaca 4976526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 6833971 - 6834028
Alignment:
Q  109 gaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 165  Q
    |||||||||||||| | |||||||||||||| |||||||||| |||||||||||||||    
T  6833971 gaagaaaatgtaaaaaactatcagctataagttaaaaagctacttgaaatagcttctc 6834028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 21860320 - 21860236
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| ||  || |||||| || ||| ||||||||| ||  ||||||||||||||||||| |||||||||||||| |||||    
T  21860320 gttaccaaacacgccacgttttcgtctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttactaaaca 21860236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 13866316 - 13866266
Alignment:
Q  218 ttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||| || |||||||||||||||||||| ||||||| ||||||||||||    
T  13866316 ttataagctagtccaacaagctataagctagcttttttatgttaccaaaca 13866266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 15508405 - 15508351
Alignment:
Q  214 aagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||| || |||||||||||||||||||| ||| || |||||||||||||    
T  15508405 aagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaaca 15508351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 21459114 - 21459024
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| |||| |||| || ||| ||||||||||||| ||||||||| ||  || |||||||||||||||| ||| | | ||||||||||||    
T  21459114 aagcttgttatcaaacacgtcacgttttcatccaacgagcttataagctaatctaacaagctataagctagcttatctatgttaccaaaca 21459024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 21778093 - 21778183
Alignment:
Q  178 aagctcgttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||||| ||| ||  |||||||| ||| |||||||||  |  ||||||| ||||||| ||| ||||||||||||||||||||    
T  21778093 aagcttgttaccaaacacaccagattttcatctaacgagcttataagttaatccaacaggctataaactagcttttttgtgttaccaaaca 21778183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 12130659 - 12130602
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  12130659 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 12130602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 20645836 - 20645779
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  20645836 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 20645779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 22707469 - 22707412
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  22707469 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 22707412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 24119160 - 24119217
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  24119160 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 24119217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 24159297 - 24159240
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || ||||||||| |||||||||| ||| || |||||||||||||    
T  24159297 aacaagcttataagctagtccaacaaactataagctaccttattcgtgttaccaaaca 24159240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 32562451 - 32562508
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||| || |||||||||||||||||||| ||| || |||||||||||||    
T  32562451 aacaaacttataagctagtccaacaagctataagctagcttattcgtgttaccaaaca 32562508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 5090124 - 5090181
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| ||||||| || |||||| ||||||||||||| ||| || |||||||||||||    
T  5090124 aacaaacttataagctagtccaagaagctataagctagcttattcgtgttaccaaaca 5090181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 5956481 - 5956424
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||||||||||| |||||| ||| ||||||||| ||| | | ||||||||||||    
T  5956481 aacaagcttataaactagtccaagaagttataagctagcttatctatgttaccaaaca 5956424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 15508528 - 15508467
Alignment:
Q  105 attggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 165  Q
    ||||||||||||| |||| | ||||||| |||||| | |||||||| |||||||||||||||    
T  15508528 attggaagaaaatataaataactatcagttataagctcaaaagctacttgaaatagcttctc 15508467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 21778007 - 21778064
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| ||| |||||| |||||||||| ||||||||||||    
T  21778007 ttggaagaaaatataaaaagctaccagttataagctaaaaagctacttgaaatagctt 21778064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 25023376 - 25023433
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||| ||| ||||||||||||    
T  25023376 ttggaagaaaatataaaaagctaccagctataagctaaaaaactacttgaaatagctt 25023433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 31603952 - 31604009
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || ||||| ||| |||||||||| ||| ||||||||| ||||||    
T  31603952 aacaagcttataagctagtccagcaaactataagctagcttatttgtgttatcaaaca 31604009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 34574635 - 34574692
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||| |||||||||||||  | |||||| ||||||    
T  34574635 aacaagcttataagctagtccaacaagttataagctaacttactcgtgttatcaaaca 34574692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 4208 - 4151
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  4208 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 4151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 11948 - 11891
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  11948 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaaca 11891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 1508 - 1592
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| |||||| ||||||||||||||||||||||| || || |||||| ||||||| || ||| ||| ||||||||||||    
T  1508 gttaccaaacacatcacgttttcatccaacaagcttataagctagttcaacaaactataagatagcttatttatgttaccaaaca 1592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 1420 - 1477
Alignment:
Q  109 gaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagcttctc 165  Q
    |||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||    
T  1420 gaagaaaatgtaaaaaactatcagctataagataaaaagctacttgaaatagcttctc 1477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 14204 - 14288
Alignment:
Q  184 gttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||||||| || ||| ||||||||| ||| ||||||||| ||  ||||| || |||||||||| ||||||||||||||||||||    
T  14204 gttaccaaacacgtcacgttttcatctaacgagcttataatctaatccaataaactataagctagcttttttgtgttaccaaaca 14288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 57880 - 57946
Alignment:
Q  202 ttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    ||||| || ||| ||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||    
T  57880 ttttcgtctaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 57946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 18554 - 18497
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||| ||||||||||||    
T  18554 ttggaagaaaatataaaaagctaccagctataagctaaaaagctacttgaaatagctt 18497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 94444 - 94504
Alignment:
Q  211 aacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaacatag 271  Q
    |||||| |||||| || || ||||||||||||||||| ||| || ||||||||||||||||    
T  94444 aacaagtttataagctagttcaacaagctataagctagcttattcgtgttaccaaacatag 94504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 268
Target Start/End: Original strand, 157629 - 157712
Alignment:
Q  185 ttaccaaatacatcatgttttcatccaacaagcttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||||| || |||  |||||||||||| ||||||||| ||  || ||||| |||||||||| ||| ||| ||||||||||||    
T  157629 ttaccaaacacgtcacattttcatccaacgagcttataagctaatctaacaaactataagctagcttatttatgttaccaaaca 157712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 76296 - 76246
Alignment:
Q  218 ttataaactggtccaacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||| || ||||||||| |||||||||| ||||||| ||||||||||||    
T  76296 ttataagctagtccaacaaactataagctaccttttttatgttaccaaaca 76246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 7030 - 6993
Alignment:
Q  231 caacaagctataagctaacttttttgtgttaccaaaca 268  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  7030 caacaaactataagctagcttttttgtgttaccaaaca 6993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 7169 - 7112
Alignment:
Q  106 ttggaagaaaatgtaaagagctatcagctataagataaaaagcta-ttgaaatagctt 162  Q
    |||||||||||| |||| |||||  ||||||||| |||||||||| ||||||||||||    
T  7169 ttggaagaaaatataaaaagctactagctataagctaaaaagctacttgaaatagctt 7112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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