View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9377_low_9 (Length: 394)

Name: NF9377_low_9
Description: NF9377
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9377_low_9
NF9377_low_9
[»] chr2 (74 HSPs)
chr2 (10-376)||(3423648-3424012)
chr2 (197-285)||(15866733-15866821)
chr2 (194-286)||(11513817-11513906)
chr2 (208-286)||(44606164-44606242)
chr2 (199-280)||(9478221-9478302)
chr2 (205-278)||(35459834-35459907)
chr2 (197-269)||(2416246-2416318)
chr2 (205-284)||(17952774-17952853)
chr2 (194-269)||(25609729-25609804)
chr2 (200-278)||(3102617-3102695)
chr2 (195-281)||(6926505-6926590)
chr2 (195-269)||(10143105-10143179)
chr2 (194-280)||(28803568-28803654)
chr2 (220-269)||(5045245-5045294)
chr2 (194-263)||(13630343-13630412)
chr2 (197-286)||(29430672-29430760)
chr2 (205-286)||(42817449-42817530)
chr2 (205-261)||(3458598-3458654)
chr2 (195-275)||(3673734-3673814)
chr2 (222-286)||(15173442-15173506)
chr2 (198-278)||(18962104-18962184)
chr2 (194-238)||(31740021-31740065)
chr2 (194-261)||(23143040-23143107)
chr2 (194-261)||(23554830-23554897)
chr2 (214-277)||(31461363-31461426)
chr2 (194-285)||(32694130-32694220)
chr2 (205-263)||(16946981-16947039)
chr2 (205-263)||(17017646-17017704)
chr2 (205-263)||(34339845-34339903)
chr2 (195-265)||(39929804-39929874)
chr2 (194-260)||(43199356-43199422)
chr2 (205-286)||(43808492-43808573)
chr2 (212-269)||(4026750-4026807)
chr2 (208-285)||(10150672-10150749)
chr2 (207-283)||(35809852-35809927)
chr2 (199-235)||(43173189-43173225)
chr2 (222-282)||(43431534-43431594)
chr2 (207-258)||(1939407-1939458)
chr2 (198-269)||(11344350-11344421)
chr2 (194-269)||(35755564-35755639)
chr2 (219-286)||(38239638-38239705)
chr2 (206-261)||(40837502-40837557)
chr2 (200-286)||(6547826-6547912)
chr2 (194-240)||(6993786-6993832)
chr2 (211-269)||(7825185-7825243)
chr2 (205-239)||(10646362-10646396)
chr2 (205-279)||(11863723-11863797)
chr2 (200-278)||(14209201-14209279)
chr2 (220-286)||(33197327-33197393)
chr2 (194-240)||(33942112-33942158)
chr2 (195-285)||(37053511-37053601)
chr2 (194-240)||(37292409-37292455)
chr2 (194-280)||(37766720-37766806)
chr2 (208-278)||(40672872-40672942)
chr2 (197-234)||(1160809-1160846)
chr2 (212-269)||(3611159-3611216)
chr2 (194-279)||(4550700-4550785)
chr2 (211-240)||(6988077-6988106)
chr2 (208-269)||(7282951-7283012)
chr2 (222-275)||(13864577-13864630)
chr2 (208-269)||(15171183-15171244)
chr2 (197-262)||(28039397-28039462)
chr2 (210-286)||(29503161-29503235)
chr2 (198-239)||(33944568-33944609)
chr2 (217-278)||(35252207-35252268)
chr2 (194-263)||(39983282-39983350)
chr2 (212-257)||(41407246-41407291)
chr2 (194-238)||(5043622-5043666)
chr2 (185-257)||(14666493-14666565)
chr2 (197-257)||(22681250-22681310)
chr2 (211-263)||(23747243-23747295)
chr2 (209-261)||(28933765-28933817)
chr2 (223-263)||(44119723-44119763)
chr2 (209-277)||(44458415-44458483)
[»] chr4 (66 HSPs)
chr4 (14-376)||(11917391-11917743)
chr4 (194-282)||(49219059-49219147)
chr4 (194-274)||(4071811-4071890)
chr4 (210-285)||(28581988-28582062)
chr4 (194-269)||(42321941-42322016)
chr4 (198-284)||(30024618-30024704)
chr4 (200-285)||(19422335-19422420)
chr4 (219-286)||(55599082-55599149)
chr4 (185-277)||(8422892-8422982)
chr4 (194-286)||(24193501-24193593)
chr4 (198-269)||(8130107-8130178)
chr4 (194-237)||(13949906-13949949)
chr4 (196-286)||(26883910-26884001)
chr4 (194-285)||(30207633-30207723)
chr4 (208-283)||(35743223-35743298)
chr4 (198-265)||(44119228-44119295)
chr4 (205-256)||(52735068-52735119)
chr4 (191-285)||(3549590-3549683)
chr4 (192-278)||(41606110-41606196)
chr4 (219-269)||(51044546-51044596)
chr4 (197-279)||(54325102-54325184)
chr4 (208-284)||(4191657-4191734)
chr4 (194-251)||(10192235-10192292)
chr4 (205-282)||(22684589-22684666)
chr4 (197-258)||(27623579-27623640)
chr4 (205-278)||(36734817-36734890)
chr4 (205-266)||(40865746-40865806)
chr4 (210-275)||(47970245-47970310)
chr4 (221-278)||(51555956-51556013)
chr4 (211-286)||(485997-486073)
chr4 (218-286)||(3249800-3249868)
chr4 (194-286)||(24443954-24444046)
chr4 (194-277)||(32920462-32920543)
chr4 (198-286)||(45128376-45128464)
chr4 (208-275)||(7022595-7022662)
chr4 (185-240)||(18630642-18630697)
chr4 (247-278)||(23819014-23819045)
chr4 (194-281)||(24160557-24160644)
chr4 (205-240)||(32724081-32724116)
chr4 (200-243)||(44007940-44007983)
chr4 (197-240)||(46859892-46859935)
chr4 (197-263)||(6364088-6364154)
chr4 (223-280)||(15511425-15511483)
chr4 (220-285)||(15969820-15969886)
chr4 (198-264)||(19040181-19040247)
chr4 (247-285)||(27321946-27321984)
chr4 (195-269)||(46013363-46013437)
chr4 (195-269)||(46247151-46247225)
chr4 (194-240)||(47119027-47119073)
chr4 (195-233)||(53192416-53192454)
chr4 (205-286)||(54414865-54414949)
chr4 (200-234)||(55437354-55437388)
chr4 (198-231)||(24091434-24091467)
chr4 (194-263)||(24160929-24160998)
chr4 (194-279)||(24929416-24929501)
chr4 (194-239)||(25434522-25434567)
chr4 (205-262)||(49803151-49803208)
chr4 (194-263)||(50745939-50746008)
chr4 (197-259)||(53626717-53626781)
chr4 (200-240)||(20936070-20936110)
chr4 (219-263)||(21193937-21193981)
chr4 (197-233)||(21952930-21952966)
chr4 (219-267)||(27968072-27968120)
chr4 (205-253)||(29194476-29194524)
chr4 (198-274)||(43372035-43372111)
chr4 (194-250)||(55870403-55870459)
[»] chr8 (49 HSPs)
chr8 (206-278)||(41620365-41620437)
chr8 (205-318)||(2699192-2699303)
chr8 (194-283)||(38561645-38561734)
chr8 (197-269)||(4558731-4558803)
chr8 (198-286)||(31884510-31884598)
chr8 (205-278)||(38874570-38874643)
chr8 (219-280)||(40728505-40728566)
chr8 (197-261)||(1470921-1470985)
chr8 (200-280)||(11494075-11494155)
chr8 (212-280)||(14482124-14482192)
chr8 (198-286)||(34788493-34788581)
chr8 (208-280)||(40357821-40357893)
chr8 (205-280)||(29056064-29056139)
chr8 (208-283)||(40280281-40280356)
chr8 (197-259)||(26820142-26820204)
chr8 (194-240)||(34770854-34770900)
chr8 (217-278)||(2364558-2364619)
chr8 (205-278)||(7026655-7026728)
chr8 (194-278)||(35298539-35298624)
chr8 (205-286)||(41336718-41336799)
chr8 (194-263)||(42597340-42597409)
chr8 (194-286)||(11056729-11056821)
chr8 (207-263)||(12224974-12225030)
chr8 (205-237)||(29262947-29262979)
chr8 (194-286)||(35869753-35869845)
chr8 (205-240)||(2100767-2100802)
chr8 (219-278)||(29699178-29699237)
chr8 (194-269)||(29973014-29973089)
chr8 (219-286)||(39392748-39392815)
chr8 (198-249)||(42237488-42237539)
chr8 (194-240)||(3537093-3537139)
chr8 (195-269)||(3945207-3945281)
chr8 (197-263)||(12361131-12361197)
chr8 (208-278)||(14949812-14949882)
chr8 (205-263)||(26215435-26215493)
chr8 (205-239)||(27728094-27728128)
chr8 (212-278)||(31315533-31315598)
chr8 (208-278)||(34563174-34563244)
chr8 (197-270)||(1112785-1112858)
chr8 (197-286)||(28769404-28769493)
chr8 (197-261)||(31705025-31705090)
chr8 (197-278)||(33209285-33209366)
chr8 (198-278)||(787172-787252)
chr8 (205-285)||(4510945-4511025)
chr8 (197-233)||(7878551-7878587)
chr8 (223-267)||(10062218-10062262)
chr8 (224-284)||(10939325-10939385)
chr8 (191-235)||(11376670-11376714)
chr8 (198-238)||(35374439-35374479)
[»] chr5 (55 HSPs)
chr5 (195-286)||(35135725-35135816)
chr5 (205-286)||(4991016-4991097)
chr5 (194-279)||(36539669-36539754)
chr5 (208-276)||(7096203-7096271)
chr5 (194-286)||(9927501-9927593)
chr5 (197-279)||(32059654-32059735)
chr5 (220-285)||(5284762-5284827)
chr5 (200-285)||(29116998-29117083)
chr5 (197-286)||(32172569-32172658)
chr5 (206-263)||(38047929-38047986)
chr5 (194-285)||(912710-912802)
chr5 (205-269)||(9202821-9202885)
chr5 (185-285)||(42181145-42181245)
chr5 (191-268)||(34117595-34117669)
chr5 (205-280)||(37063147-37063222)
chr5 (223-285)||(12407752-12407813)
chr5 (194-276)||(18704098-18704179)
chr5 (220-286)||(20982223-20982289)
chr5 (209-287)||(38766920-38766998)
chr5 (205-278)||(6733966-6734038)
chr5 (225-286)||(26516214-26516275)
chr5 (197-262)||(36796771-36796836)
chr5 (194-286)||(39823183-39823276)
chr5 (197-269)||(10907312-10907384)
chr5 (211-286)||(11835192-11835268)
chr5 (200-240)||(32969185-32969225)
chr5 (217-285)||(35095868-35095936)
chr5 (194-278)||(35960338-35960421)
chr5 (219-266)||(1636844-1636891)
chr5 (219-286)||(6739788-6739855)
chr5 (205-240)||(8158374-8158409)
chr5 (194-257)||(9703302-9703365)
chr5 (201-240)||(10303763-10303802)
chr5 (197-240)||(14295468-14295511)
chr5 (211-278)||(17756808-17756875)
chr5 (197-240)||(35550911-35550953)
chr5 (205-240)||(39750105-39750140)
chr5 (195-237)||(583836-583878)
chr5 (194-239)||(3952061-3952104)
chr5 (230-280)||(38033890-38033940)
chr5 (211-269)||(40048359-40048417)
chr5 (194-263)||(4855637-4855706)
chr5 (194-239)||(10272493-10272538)
chr5 (226-279)||(10391276-10391329)
chr5 (217-258)||(11615452-11615493)
chr5 (225-278)||(13224353-13224406)
chr5 (212-269)||(14932223-14932280)
chr5 (194-235)||(34205206-34205247)
chr5 (198-263)||(39128578-39128643)
chr5 (200-240)||(12595808-12595848)
chr5 (225-269)||(17498668-17498712)
chr5 (194-278)||(19177403-19177487)
chr5 (217-269)||(21782654-21782706)
chr5 (205-277)||(28586839-28586911)
chr5 (205-286)||(40534110-40534193)
[»] chr3 (69 HSPs)
chr3 (194-277)||(37788786-37788868)
chr3 (206-279)||(38462204-38462277)
chr3 (200-262)||(1395611-1395673)
chr3 (208-278)||(16790432-16790502)
chr3 (194-260)||(29771751-29771817)
chr3 (205-279)||(33307653-33307727)
chr3 (200-284)||(36783402-36783488)
chr3 (196-278)||(43116492-43116574)
chr3 (208-285)||(3182438-3182515)
chr3 (205-285)||(20349549-20349629)
chr3 (208-280)||(44374720-44374792)
chr3 (211-279)||(49772747-49772815)
chr3 (194-261)||(48397587-48397654)
chr3 (194-284)||(22214743-22214833)
chr3 (194-284)||(28779274-28779364)
chr3 (194-240)||(32555043-32555089)
chr3 (208-269)||(3757981-3758042)
chr3 (205-266)||(4990630-4990691)
chr3 (197-269)||(20192671-20192743)
chr3 (198-278)||(32703062-32703142)
chr3 (198-257)||(37689450-37689509)
chr3 (212-279)||(39971242-39971309)
chr3 (194-260)||(24235745-24235811)
chr3 (219-269)||(24605103-24605153)
chr3 (209-263)||(48364956-48365010)
chr3 (225-286)||(16790181-16790242)
chr3 (205-286)||(22232742-22232823)
chr3 (206-286)||(24268228-24268309)
chr3 (207-240)||(25195386-25195419)
chr3 (205-278)||(27792796-27792869)
chr3 (205-270)||(53736186-53736251)
chr3 (205-278)||(54775052-54775125)
chr3 (194-238)||(2865721-2865765)
chr3 (225-269)||(8142803-8142847)
chr3 (205-257)||(10101549-10101601)
chr3 (205-257)||(10212474-10212526)
chr3 (198-286)||(21574408-21574495)
chr3 (194-269)||(23530246-23530322)
chr3 (198-266)||(30669036-30669104)
chr3 (205-277)||(36646455-36646527)
chr3 (220-280)||(41028939-41028999)
chr3 (207-278)||(32663566-32663636)
chr3 (219-265)||(36283659-36283703)
chr3 (199-285)||(25129748-25129833)
chr3 (206-240)||(26990696-26990730)
chr3 (194-280)||(36101490-36101576)
chr3 (200-258)||(49586984-49587042)
chr3 (208-278)||(53457301-53457371)
chr3 (212-265)||(2128331-2128384)
chr3 (194-235)||(3467450-3467491)
chr3 (245-286)||(9279439-9279480)
chr3 (197-277)||(25183053-25183134)
chr3 (195-240)||(26599140-26599185)
chr3 (208-285)||(28283653-28283730)
chr3 (212-261)||(33882969-33883018)
chr3 (194-263)||(40122815-40122883)
chr3 (220-281)||(41159030-41159091)
chr3 (220-269)||(49546575-49546624)
chr3 (225-286)||(49739483-49739544)
chr3 (208-269)||(52413197-52413258)
chr3 (205-277)||(905043-905115)
chr3 (198-274)||(8007761-8007837)
chr3 (205-257)||(10357378-10357430)
chr3 (205-257)||(15304420-15304472)
chr3 (197-237)||(23315591-23315631)
chr3 (225-285)||(25964359-25964419)
chr3 (246-286)||(28842971-28843011)
chr3 (221-269)||(42039092-42039140)
chr3 (205-261)||(42809242-42809298)
[»] chr6 (51 HSPs)
chr6 (205-286)||(3217263-3217344)
chr6 (219-286)||(32975894-32975961)
chr6 (195-269)||(24836262-24836336)
chr6 (198-279)||(29274295-29274376)
chr6 (197-256)||(2027471-2027530)
chr6 (197-286)||(22742282-22742371)
chr6 (194-277)||(10452422-10452505)
chr6 (218-285)||(28531627-28531694)
chr6 (195-239)||(27595630-27595674)
chr6 (194-269)||(4006647-4006722)
chr6 (194-285)||(11340687-11340777)
chr6 (200-286)||(2206506-2206592)
chr6 (198-256)||(7785808-7785866)
chr6 (205-279)||(8349737-8349811)
chr6 (197-279)||(10032494-10032576)
chr6 (195-280)||(2514624-2514709)
chr6 (197-286)||(3155092-3155181)
chr6 (217-286)||(4248874-4248943)
chr6 (205-278)||(5328898-5328971)
chr6 (197-285)||(10400186-10400274)
chr6 (205-286)||(10749301-10749381)
chr6 (208-285)||(31672544-31672621)
chr6 (205-286)||(33068634-33068715)
chr6 (228-284)||(5554861-5554917)
chr6 (205-277)||(7713950-7714022)
chr6 (205-269)||(20671938-20672002)
chr6 (198-278)||(21959652-21959732)
chr6 (205-237)||(27693512-27693544)
chr6 (197-240)||(281913-281956)
chr6 (205-280)||(7354126-7354201)
chr6 (205-240)||(27713469-27713504)
chr6 (219-258)||(27857319-27857358)
chr6 (205-268)||(32513759-32513821)
chr6 (198-240)||(1402958-1403000)
chr6 (194-240)||(2117365-2117411)
chr6 (208-286)||(6078365-6078443)
chr6 (197-263)||(9093621-9093687)
chr6 (205-263)||(24476541-24476599)
chr6 (206-279)||(28660160-28660234)
chr6 (205-251)||(28660833-28660879)
chr6 (194-268)||(34429752-34429826)
chr6 (207-279)||(1497903-1497976)
chr6 (205-234)||(2732312-2732341)
chr6 (205-278)||(4325381-4325454)
chr6 (219-280)||(8420284-8420345)
chr6 (194-239)||(11363430-11363475)
chr6 (219-259)||(2027891-2027931)
chr6 (205-273)||(2034512-2034579)
chr6 (211-263)||(9559620-9559672)
chr6 (209-273)||(29940725-29940789)
chr6 (229-269)||(33116538-33116578)
[»] scaffold0024 (2 HSPs)
scaffold0024 (194-286)||(27492-27584)
scaffold0024 (205-263)||(21351-21409)
[»] chr1 (64 HSPs)
chr1 (199-286)||(4200145-4200232)
chr1 (194-270)||(15360826-15360902)
chr1 (196-285)||(45990122-45990211)
chr1 (205-285)||(870962-871042)
chr1 (194-279)||(28467369-28467456)
chr1 (208-286)||(7274015-7274093)
chr1 (197-286)||(49516985-49517075)
chr1 (198-278)||(44032065-44032145)
chr1 (198-266)||(48830142-48830210)
chr1 (217-274)||(289168-289225)
chr1 (194-275)||(17269177-17269258)
chr1 (194-263)||(29007778-29007847)
chr1 (198-286)||(43372025-43372113)
chr1 (223-286)||(16982027-16982090)
chr1 (200-267)||(29793991-29794057)
chr1 (199-286)||(50998468-50998555)
chr1 (198-240)||(27738246-27738288)
chr1 (194-240)||(30371110-30371156)
chr1 (212-278)||(33339500-33339566)
chr1 (198-267)||(4256108-4256177)
chr1 (194-239)||(7218136-7218181)
chr1 (198-255)||(44936656-44936713)
chr1 (205-278)||(46980202-46980275)
chr1 (194-279)||(49557064-49557149)
chr1 (198-283)||(52286597-52286682)
chr1 (205-269)||(1232965-1233029)
chr1 (213-269)||(1730825-1730881)
chr1 (200-240)||(10439648-10439688)
chr1 (225-285)||(11218175-11218235)
chr1 (205-269)||(11560622-11560686)
chr1 (208-256)||(14737781-14737829)
chr1 (197-237)||(15361678-15361718)
chr1 (198-286)||(17420119-17420207)
chr1 (206-286)||(23895252-23895332)
chr1 (185-237)||(29723454-29723506)
chr1 (215-263)||(36641814-36641862)
chr1 (205-281)||(42336583-42336659)
chr1 (200-263)||(4215311-4215374)
chr1 (197-240)||(9656612-9656655)
chr1 (194-233)||(25006096-25006135)
chr1 (205-264)||(36151578-36151637)
chr1 (208-239)||(45234160-45234191)
chr1 (197-240)||(47877084-47877127)
chr1 (208-263)||(50319231-50319286)
chr1 (194-240)||(5421982-5422028)
chr1 (220-285)||(4202217-4202282)
chr1 (209-286)||(4304277-4304354)
chr1 (194-239)||(5592747-5592792)
chr1 (208-261)||(6933037-6933090)
chr1 (219-280)||(10854655-10854716)
chr1 (205-258)||(11211062-11211115)
chr1 (205-285)||(30815708-30815789)
chr1 (209-278)||(36602714-36602783)
chr1 (201-286)||(37818380-37818465)
chr1 (221-286)||(44940259-44940324)
chr1 (194-239)||(45205031-45205076)
chr1 (205-269)||(27140418-27140482)
chr1 (206-258)||(38867907-38867959)
chr1 (209-285)||(40357963-40358039)
chr1 (200-240)||(41516148-41516188)
chr1 (221-285)||(41638399-41638463)
chr1 (205-277)||(45107548-45107619)
chr1 (211-282)||(48282053-48282125)
chr1 (205-261)||(52559901-52559957)
[»] chr7 (72 HSPs)
chr7 (208-265)||(8680929-8680986)
chr7 (195-280)||(49060462-49060547)
chr7 (205-286)||(30133967-30134046)
chr7 (194-284)||(30496622-30496712)
chr7 (194-263)||(45813242-45813311)
chr7 (206-278)||(30751441-30751513)
chr7 (194-265)||(1417201-1417272)
chr7 (194-281)||(44241781-44241867)
chr7 (198-268)||(23918891-23918961)
chr7 (205-287)||(27121659-27121741)
chr7 (205-283)||(35536026-35536104)
chr7 (219-269)||(39505890-39505940)
chr7 (194-279)||(9527152-9527237)
chr7 (205-258)||(39591540-39591593)
chr7 (205-278)||(45593792-45593865)
chr7 (194-278)||(5010530-5010614)
chr7 (197-283)||(7453462-7453549)
chr7 (198-269)||(28165024-28165095)
chr7 (197-240)||(31002723-31002766)
chr7 (219-286)||(31341110-31341177)
chr7 (197-240)||(40689051-40689094)
chr7 (219-269)||(5939017-5939067)
chr7 (208-278)||(7244626-7244696)
chr7 (205-278)||(991994-992067)
chr7 (194-263)||(3501028-3501097)
chr7 (194-291)||(5373136-5373233)
chr7 (205-278)||(22759110-22759183)
chr7 (195-280)||(25511549-25511634)
chr7 (197-278)||(47004011-47004092)
chr7 (218-286)||(1431394-1431462)
chr7 (200-263)||(1432032-1432098)
chr7 (207-279)||(2223071-2223143)
chr7 (196-240)||(30456514-30456558)
chr7 (213-257)||(41875864-41875908)
chr7 (185-265)||(48157173-48157253)
chr7 (197-240)||(12835002-12835045)
chr7 (198-237)||(22296294-22296333)
chr7 (185-228)||(24895330-24895373)
chr7 (195-278)||(27481357-27481440)
chr7 (205-271)||(5272893-5272959)
chr7 (219-269)||(5276157-5276207)
chr7 (194-228)||(24909638-24909672)
chr7 (206-276)||(24973870-24973940)
chr7 (210-263)||(31149586-31149640)
chr7 (210-263)||(31167878-31167932)
chr7 (219-269)||(35808991-35809041)
chr7 (210-264)||(36532289-36532343)
chr7 (199-277)||(38496583-38496659)
chr7 (194-240)||(45777233-45777279)
chr7 (205-239)||(46825061-46825095)
chr7 (211-240)||(3635927-3635956)
chr7 (205-262)||(5006582-5006639)
chr7 (205-262)||(7623078-7623135)
chr7 (213-278)||(8445210-8445275)
chr7 (197-278)||(27548187-27548268)
chr7 (205-266)||(27626197-27626258)
chr7 (208-261)||(28178910-28178963)
chr7 (194-263)||(28613596-28613665)
chr7 (220-285)||(29574689-29574754)
chr7 (198-279)||(39551614-39551695)
chr7 (198-239)||(40428518-40428559)
chr7 (206-262)||(1373614-1373670)
chr7 (213-269)||(5269463-5269519)
chr7 (225-269)||(14823938-14823982)
chr7 (225-269)||(15270945-15270989)
chr7 (217-273)||(20476595-20476651)
chr7 (233-269)||(25507284-25507320)
chr7 (233-269)||(25558290-25558326)
chr7 (233-269)||(25558488-25558524)
chr7 (205-269)||(33894556-33894619)
chr7 (197-257)||(38010659-38010719)
chr7 (197-237)||(39908059-39908099)
[»] scaffold0590 (1 HSPs)
scaffold0590 (205-277)||(1147-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (205-277)||(2756-2828)
[»] scaffold0103 (1 HSPs)
scaffold0103 (198-262)||(51508-51572)
[»] scaffold0549 (2 HSPs)
scaffold0549 (194-285)||(1786-1876)
scaffold0549 (194-285)||(3876-3966)
[»] scaffold0015 (1 HSPs)
scaffold0015 (205-243)||(69016-69054)
[»] scaffold0085 (1 HSPs)
scaffold0085 (198-239)||(34063-34104)
[»] scaffold0508 (1 HSPs)
scaffold0508 (205-280)||(9848-9923)
[»] scaffold0349 (1 HSPs)
scaffold0349 (205-240)||(18440-18475)
[»] scaffold0287 (1 HSPs)
scaffold0287 (211-240)||(10129-10158)
[»] scaffold0221 (1 HSPs)
scaffold0221 (205-262)||(20235-20292)
[»] scaffold0153 (2 HSPs)
scaffold0153 (197-234)||(6563-6600)
scaffold0153 (197-234)||(13583-13620)
[»] scaffold0060 (1 HSPs)
scaffold0060 (213-278)||(63366-63431)


Alignment Details
Target: chr2 (Bit Score: 314; Significance: 1e-177; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 10 - 376
Target Start/End: Original strand, 3423648 - 3424012
Alignment:
Q  10 agcagagatgacaaaaaggtatgctcatatacttttcatttgtattttaaagtcttatttgatctaatccacgggtacaaacggtgatgaccctaagcac 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |    
T  3423648 agcagagatgacaaaaaggtatgctcatatacttttcatttgtattttaaagtcttatttgatctaatctaccggtacaaacggtgatgaccctaagcgc 3423747  T
Q  110 gggtgttaggggcgactcatagcaccaatannnnnnnnatcaatagtatgtatatatatttagacgagaaccaatttgtgtaagcaacttataggttata 209  Q
    ||||||| ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3423748 gggtgtttggggcgactcatagcaccaatatttttt--atcaatagtatgtatatatatttagacgagaaccaatttgtgtaagcaacttataggttata 3423845  T
Q  210 tgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttatttttaagatgttggtccaaacag 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3423846 tgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcacttatttttaagatgttggtccaaacag 3423945  T
Q  310 ggcccaagtctaagttgaatcaaatgtatcaatacccctttctatttcttattttgatttccttggt 376  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3423946 ggcccaagtctaagttgaatcaaatgtatcaatacccctttctatttcatattttgatttccttggt 3424012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 15866733 - 15866821
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    ||||||| ||||||||||| || | ||||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  15866733 cttatagcttatatgaaaacaagtcgactttattttacattttgttacaaaaataacttatacacaaacacttgtatgataagcactta 15866821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 286
Target Start/End: Complemental strand, 11513906 - 11513817
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||| |     |||||||||||||||||| ||| ||||||||| ||||||    
T  11513906 caacttatagcttatatgaaaacaatttgactttattttatcttttgtt---gtaataacttatacataaacccttatatgataagtgcttat 11513817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 286
Target Start/End: Original strand, 44606164 - 44606242
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||| |||| | ||||||||||||||||| ||  |||||| ||||||||||||||||| ||| ||||||||||||    
T  44606164 tatgaaaacaattggtctttattttatcttttgttatgaaaatagcttatacataaacacttatataataagcgcttat 44606242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 9478302 - 9478221
Alignment:
Q  199 tataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    ||||| ||||||||||||| ||||| ||||||||||||  || || | ||||| ||||||||||||||||| ||||||||||    
T  9478302 tatagcttatatgaaaatattttgagtttattttatctactgttatagaaatagcttatacataaacacttatatgataagc 9478221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 35459907 - 35459834
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||| ||||| ||||||||||||||||||||||||||| | ||||| |||||||| || ||||| ||||||||    
T  35459907 ttatacgaaaacaatttgactttattttatcttttggtatacaaatagcttatacaaaatcacttatatgataa 35459834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 2416318 - 2416246
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||| |||||| |||| ||||| |||| ||||||||||||| |||| ||||||||||||||||| |||||    
T  2416318 cttatagcttatatcaaaacaatttaacttcattttatcttttgctacagaaataacttatacataagcactt 2416246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 17952774 - 17952853
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctt 284  Q
    ||||||||||||| |||||||||||||||||||||| || | ||||| |||||| |||| | ||| ||||||||| ||||    
T  17952774 ttatatgaaaatagtttgactttattttatcttttgttatagaaatagcttatatataagctcttatatgataagtgctt 17952853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 25609804 - 25609729
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||||  || | ||||| ||||||||||| |||||    
T  25609804 caacttatagcttatacgaaaataaattgactttattttatcttttcttatagaaatagcttatacataagcactt 25609729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 200 - 278
Target Start/End: Complemental strand, 3102695 - 3102617
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||| |||||| |||||| |||||||||||||||| ||||| || ||||||| ||||||||||| || || ||||||||    
T  3102695 atagattatataaaaatagtttgactttattttatattttgctataaaaatagcttatacataagcagttatatgataa 3102617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 6926505 - 6926590
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcg 281  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||  |  | |||| ||||||||||||||| || |||||||||||    
T  6926505 aacttatagtttatatgaaaacaatttgac-ttattttatcttttcttgtacaaatgacttatacataaacatttatatgataagcg 6926590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 10143179 - 10143105
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||||| |||||| |||| | |||||||| ||||||||||||| || | ||||||||||||||||| |||||    
T  10143179 aacttatagcttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatacataagcactt 10143105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 194 - 280
Target Start/End: Original strand, 28803568 - 28803654
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    |||||| ||| ||||||||||  | |||||||||||||||||||||| ||   |||||||||||| |||| ||||| ||||||||||    
T  28803568 caacttgtagcttatatgaaatcagtttgactttattttatcttttgttatcgaaataacttatatataagcacttatatgataagc 28803654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 5045245 - 5045294
Alignment:
Q  220 ttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  5045245 ttgactttattttatcttttgttataaaaatagcttatacataaacactt 5045294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 13630343 - 13630412
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||||||| | ||||||||||| | ||||||||||| |||||||||| || | |||||||||||||||||    
T  13630343 caacttattgattatatgaaaacagtttgactttatcttatcttttgatagagaaataacttatacataa 13630412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 286
Target Start/End: Complemental strand, 29430760 - 29430672
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||| ||||| ||||| | ||||||||||||| | |||||| || | ||||| ||||||||||||| |||||||||||| |||||||    
T  29430760 cttatagcttataagaaaacagtttgactttatttaa-cttttgttatagaaatagcttatacataaacccttgtatgataaacgcttat 29430672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 42817449 - 42817530
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||||||| |  ||||||| |||||||||||||||| | ||||||| |||| || ||||||| |||||||| |||||||    
T  42817449 ttatatgaaaacagcttgacttcattttatcttttggtatagaaataacatataaatcaacacttatatgataaacgcttat 42817530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 3458654 - 3458598
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 261  Q
    ||||||||||| | |||||||||||||||||||||| || |||||||||||| ||||    
T  3458654 ttatatgaaaaaagtttgactttattttatcttttgttataaaaataacttagacat 3458598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 3673814 - 3673734
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatga 275  Q
    ||||||||  ||||||||||| ||||| |||||||||||| ||||| || | |||||||| |||||||| ||||| |||||    
T  3673814 aacttataacttatatgaaaacaatttaactttattttatattttgttatagaaataactaatacataagcacttatatga 3673734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 286
Target Start/End: Complemental strand, 15173506 - 15173442
Alignment:
Q  222 gactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||| |||||||| || | |||||||||||||||| ||||||||| |||||||| ||||    
T  15173506 gactttatttcatcttttgttatagaaataacttatacatagacacttgtacgataagcgtttat 15173442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 18962104 - 18962184
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||| ||||||||||| | ||| |||||||||||||||||| || ||||||| || |||||||| |||||  |||||||    
T  18962104 ttatagcttatatgaaaacagtttaactttattttatcttttgttataaaaatagctaatacataagcacttacatgataa 18962184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 31740021 - 31740065
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttt 238  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  31740021 caacttatagcttatatgaaaatagtttgactttattttatcttt 31740065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 23143040 - 23143107
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 261  Q
    ||||| |||| ||||| ||||| ||||||| || ||||||||||||| |||||||||| |||||||||    
T  23143040 caactaatagcttataagaaaacaatttgatttgattttatcttttgttacaaaaatagcttatacat 23143107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 23554830 - 23554897
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 261  Q
    ||||| |||| ||||| ||||| ||||||| || ||||||||||||| |||||||||| |||||||||    
T  23554830 caactaatagcttataagaaaacaatttgatttgattttatcttttgttacaaaaatagcttatacat 23554897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 277
Target Start/End: Complemental strand, 31461426 - 31461363
Alignment:
Q  214 aataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 277  Q
    ||||||||||||||||||||||||||| || | ||||| |||||| |||| ||||| |||||||    
T  31461426 aataatttgactttattttatcttttgttatagaaatagcttatatataaccacttatatgata 31461363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 285
Target Start/End: Complemental strand, 32694220 - 32694130
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    |||||||||  |||||| |||||| | ||| |||||||||||||||| || | ||||| ||||||||| || |||| |||||||||||||||    
T  32694220 caacttataaattatataaaaatagtctgattttattttatcttttgatatagaaatagcttatacat-aatacttatatgataagcgctta 32694130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 16947039 - 16946981
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||| |||||||||||||||||||||| |||||||  |||| ||||| |||||||||||    
T  16947039 ttatgtgaaaataatttgactttatttaatcttttcttacacaaatagcttatacataa 16946981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 17017704 - 17017646
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||| |||||||||||||||||||||| |||||||  |||| ||||| |||||||||||    
T  17017704 ttatgtgaaaataatttgactttatttaatcttttcttacacaaatagcttatacataa 17017646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 34339903 - 34339845
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    ||||| |||||||||||||||||||||||||||||| |  ||||| |||||| ||||||    
T  34339903 ttatacgaaaataatttgactttattttatcttttgttttaaaaacaacttacacataa 34339845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 39929874 - 39929804
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaac 265  Q
    ||||||||| |||||| |||| ||||||| || ||||||||||||| || || ||||||||||| ||||||    
T  39929874 aacttatagcttatataaaaacaatttgatttgattttatcttttgttataacaataacttataaataaac 39929804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 260
Target Start/End: Complemental strand, 43199422 - 43199356
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttataca 260  Q
    |||||||||| ||||| ||| ||||||| |||||||||||||||||| |  | ||||||||||||||    
T  43199422 caacttatagcttatacgaagataatttaactttattttatcttttgttgtagaaataacttataca 43199356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 286
Target Start/End: Complemental strand, 43808573 - 43808492
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggta-caaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||||||||| ||| ||||||||||||  |||| ||  ||||||| ||||||||||||||||| ||||||| ||||||||    
T  43808573 ttatatgaaaatagtttaactttattttat-gtttgttataaaaaatagcttatacataaacacttatatgatacgcgcttat 43808492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 4026807 - 4026750
Alignment:
Q  212 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||||| |||||||||||||||||| || ||||||| |||||| |||| |||||    
T  4026807 aaaataatttaactttattttatcttttgctataaaaatagcttatagataagcactt 4026750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 10150749 - 10150672
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    ||||||||  |||| || ||||||||||||||  || | ||||||||||||||||||||||| ||| ||||| |||||    
T  10150749 tatgaaaaccatttaacgttattttatcttttattatagaaataacttatacataaacacttatataataagtgctta 10150672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 35809927 - 35809852
Alignment:
Q  207 atatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgct 283  Q
    ||||||||| ||||||| |||||||||||||| |  |   ||||||||||||||||| ||||| |||||||||||||    
T  35809927 atatgaaaacaatttgattttattttatcttt-gtcatggaaataacttatacataagcacttatatgataagcgct 35809852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 43173225 - 43173189
Alignment:
Q  199 tataggttatatgaaaataatttgactttattttatc 235  Q
    ||||| |||||||||||||||||||||||||||||||    
T  43173225 tatagcttatatgaaaataatttgactttattttatc 43173189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 43431534 - 43431594
Alignment:
Q  222 gactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgc 282  Q
    ||||||| ||||||||||| ||   ||||||||||||||| ||||||| ||||||||||||    
T  43431534 gactttactttatcttttgttattgaaataacttatacattaacacttatatgataagcgc 43431594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 258
Target Start/End: Original strand, 1939407 - 1939458
Alignment:
Q  207 atatgaaaataatttgactttattttatcttttggtacaaaaataacttata 258  Q
    ||||||||||| ||| |||||||||||||||||| || | ||||||||||||    
T  1939407 atatgaaaatagtttcactttattttatcttttgttatagaaataacttata 1939458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 11344350 - 11344421
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||| || |||||||| ||||||||||| |||||||||||| || | ||||| ||||| ||||| |||||    
T  11344350 ttatagcttgtatgaaaacaatttgactttcttttatcttttgttatagaaatatcttatgcataagcactt 11344421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 35755564 - 35755639
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||||| ||| ||||||| |||||||||||||||| | |||   || | ||||| |||||||||||||||||    
T  35755564 caacttatagcttacatgaaaacaatttgactttattttctatttgattatagaaatagcttatacataaacactt 35755639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 38239638 - 38239705
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||| ||||||||||||| || | ||||| |||||||||||||||||  ||||| || ||||||    
T  38239638 tttgacttgattttatcttttgttatagaaatagcttatacataaacacttacatgatgagtgcttat 38239705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 40837502 - 40837557
Alignment:
Q  206 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 261  Q
    |||||||||| |||||||||||| ||||||||||| || | ||||| |||||||||    
T  40837502 tatatgaaaacaatttgactttaatttatcttttgttatagaaatagcttatacat 40837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 286
Target Start/End: Complemental strand, 6547912 - 6547826
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||| |||||| |||||| ||||||||| ||||  |||||| || | ||||||||||||||  |||||||||| || ||||| ||||    
T  6547912 atagcttatataaaaatattttgactttgttttgacttttgctatagaaataacttatacacgaacacttgtaagaaaagcggttat 6547826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 6993786 - 6993832
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||| ||||| ||||||||| |||||||||| |||||||||||||||    
T  6993786 caacctatagcttatatgaatataatttgaccttattttatcttttg 6993832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 7825243 - 7825185
Alignment:
Q  211 gaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||| ||||| |||||| ||||||||||| || ||||||| |||||||| ||||||||    
T  7825243 gaaaaaaatttaactttactttatcttttgttataaaaatagcttatacagaaacactt 7825185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 10646362 - 10646396
Alignment:
Q  205 ttatatgaaaataatttgactttattttatctttt 239  Q
    ||||| |||||||||||||||||||||||||||||    
T  10646362 ttataggaaaataatttgactttattttatctttt 10646396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 279
Target Start/End: Original strand, 11863723 - 11863797
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    ||||||||||| ||||| ||| |||||||||||||| |  |||| ||||| |||||||| ||||| ||| |||||    
T  11863723 ttatatgaaaacaatttaactctattttatcttttgctgtaaaactaactcatacataaccacttatataataag 11863797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 278
Target Start/End: Complemental strand, 14209279 - 14209201
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||| ||||||||||| | ||||| |||||||||||||||| ||   ||||| |||| ||| |||||||| ||||||||    
T  14209279 atagcttatatgaaaacagtttgaatttattttatcttttgttattgaaatagcttagacagaaacacttatatgataa 14209201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 286
Target Start/End: Original strand, 33197327 - 33197393
Alignment:
Q  220 ttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||||||| ||||||||| || | ||||| |||||| |||| ||||| ||||||||||| ||||    
T  33197327 ttgactttattctatcttttgttatagaaatagcttatagataagcacttatatgataagcgtttat 33197393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 33942158 - 33942112
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||||||||| ||| ||||||| | ||||||||||||||||||||||    
T  33942158 caacttatagcttacatgaaaacagtttgactttattttatcttttg 33942112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 37053601 - 37053511
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    ||||||||  ||||||||||| | |||||||||||||||| || || || | |||||   ||||||||| ||||| ||||||||| |||||    
T  37053601 aacttataacttatatgaaaacagtttgactttattttattttctgttatagaaatagtctatacataagcacttatatgataagtgctta 37053511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 37292409 - 37292455
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||| |||| ||||||||||||| ||| ||||||||||||||||||    
T  37292409 caactaatagcttatatgaaaatagttttactttattttatcttttg 37292455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 280
Target Start/End: Complemental strand, 37766806 - 37766720
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    |||||||||| ||||| ||||| | |||||||||||||||| |||||  | |  |||| || |||||||| ||||| ||||||||||    
T  37766806 caacttatagtttatacgaaaacattttgactttattttattttttgtcatatgaatagctaatacataagcacttatatgataagc 37766720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 40672872 - 40672942
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||| ||| |||||||||||||||||||   | | |||||||||||||||||| ||||  |||||||    
T  40672872 tatgaaaacaatgtgactttattttatcttttttcatagaaataacttatacataaaaacttaaatgataa 40672942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 1160809 - 1160846
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttat 234  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  1160809 cttatagcttatatgaaaatagtttgactttattttat 1160846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 3611216 - 3611159
Alignment:
Q  212 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||| ||||| ||||||||||| |||||| || | ||||||||||||||||| |||||    
T  3611216 aaaacaatttaactttattttaccttttgctatagaaataacttatacataagcactt 3611159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 279
Target Start/End: Complemental strand, 4550785 - 4550700
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    |||||||||| ||||||||||| |  ||||| ||||||||||||||  ||   ||| ||||||||||||| ||||| | |||||||    
T  4550785 caacttatagtttatatgaaaacagcttgacgttattttatcttttattatggaaacaacttatacataagcacttatgtgataag 4550700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 240
Target Start/End: Complemental strand, 6988106 - 6988077
Alignment:
Q  211 gaaaataatttgactttattttatcttttg 240  Q
    ||||||||||||||||||||||||||||||    
T  6988106 gaaaataatttgactttattttatcttttg 6988077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 7283012 - 7282951
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||| | |||||||| ||||| ||||||  || ||||||| |||||||||||||||||    
T  7283012 tatgaaaacagtttgacttcattttttcttttcttataaaaatagcttatacataaacactt 7282951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 13864630 - 13864577
Alignment:
Q  222 gactttattttatcttttggtacaaaaataacttatacataaacacttgtatga 275  Q
    |||||||||||| |||||| || | ||||| ||||||||||||||||| |||||    
T  13864630 gactttattttaccttttgttatagaaatagcttatacataaacacttatatga 13864577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 15171244 - 15171183
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||| | |||||||||| |||||||| || || | ||| |||||||||||||||||||    
T  15171244 tatgaaaacattttgactttaatttatcttctgttatagaaaaaacttatacataaacactt 15171183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 28039397 - 28039462
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 262  Q
    ||||||| ||||||||||| |||| |||||||||||||||| ||  || |||||| ||||| ||||    
T  28039397 cttatagtttatatgaaaacaattggactttattttatcttgtgtaaccaaaatagcttattcata 28039462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 29503161 - 29503235
Alignment:
Q  210 tgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||| |||||||||||||||||  ||| || | ||||| | ||||||||||||||| ||| ||||| ||||||    
T  29503161 tgaaaatagtttgactttattttatc--ttgttatagaaatatcatatacataaacacttctataataagtgcttat 29503235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 33944609 - 33944568
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatctttt 239  Q
    |||||| ||||||||||| |||||||||||||||||| ||||    
T  33944609 ttatagcttatatgaaaacaatttgactttattttatatttt 33944568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 35252207 - 35252268
Alignment:
Q  217 aatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||||||||||||||||||  || |  |||||| |||||||||||| || ||||||||    
T  35252207 aatttgactttattttatcttttattaaaggaataacatatacataaacatttatatgataa 35252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 39983350 - 39983282
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||||||||| |||||||||||| |||| | ||||||||| | |||| |||||||||| |||||| ||||    
T  39983350 caacttatagcttatatgaaaattattttattttatttta-cctttgttacaaaaatagcttatatataa 39983282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 41407291 - 41407246
Alignment:
Q  212 aaaataatttgactttattttatcttttggtacaaaaataacttat 257  Q
    |||| ||||| ||||||||||||||||||||||| ||||| |||||    
T  41407291 aaaacaatttaactttattttatcttttggtacagaaatagcttat 41407246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 5043622 - 5043666
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttt 238  Q
    |||||| ||| ||||||||||| | ||||||||||||||||||||    
T  5043622 caacttctagcttatatgaaaacagtttgactttattttatcttt 5043666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 257
Target Start/End: Complemental strand, 14666565 - 14666493
Alignment:
Q  185 ttgtgtaagcaacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 257  Q
    ||||| || |||||||||  ||||||||||  | |||||||||||||||||||||| ||  |||| |||||||    
T  14666565 ttgtgaaaacaacttataacttatatgaaatcagtttgactttattttatcttttgttatcaaaacaacttat 14666493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 22681250 - 22681310
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 257  Q
    ||||||| ||||||||||| |||||| |||| |||||||||||| |  |||||||| ||||    
T  22681250 cttatagcttatatgaaaacaatttggctttgttttatcttttgttttaaaaataatttat 22681310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 23747295 - 23747243
Alignment:
Q  211 gaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    ||||||||||| | || ||||||||||||| || ||||||| |||||||||||    
T  23747295 gaaaataatttaaattcattttatcttttgatataaaaatagcttatacataa 23747243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 28933817 - 28933765
Alignment:
Q  209 atgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 261  Q
    ||||||||||||||| || ||||||||||||| || | ||||| |||||||||    
T  28933817 atgaaaataatttgatttgattttatcttttgttatataaatagcttatacat 28933765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 44119763 - 44119723
Alignment:
Q  223 actttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||||||||||||||||  || |||||||||||||||||||    
T  44119763 actttattttatcttttactataaaaataacttatacataa 44119723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 277
Target Start/End: Original strand, 44458415 - 44458483
Alignment:
Q  209 atgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 277  Q
    |||||||||  ||||||||| ||||||| ||| |  ||||||| |||||||||||| |||| |||||||    
T  44458415 atgaaaatagcttgactttagtttatctgttgttgaaaaaatagcttatacataaatacttatatgata 44458483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 179; Significance: 2e-96; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 14 - 376
Target Start/End: Complemental strand, 11917743 - 11917391
Alignment:
Q  14 gagatgacaaaaaggtatgctcatatacttttcatttgtattttaaagtcttatttgatctaatccacgggtacaaacggtgatgaccctaagcacgggt 113  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||  | ||| || ||||||||  ||||||||||||||| | |||    
T  11917743 gagatgacaaaaaggtaggctcatatacttt-catttgtgttttaaaggcttatttgaatttatctactggtacaaaaagtgatgaccctaagcgcaggt 11917645  T
Q  114 gttaggggcgactcatagcaccaatannnnnnnnatcaatagtatgtatatatatttagacgagaaccaatttgtgtaagcaacttataggttatatgaa 213  Q
    | ||||||||| |||||||  |||||         | ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11917644 ggtaggggcgaatcatagcggcaatatttttt---ttaatagtatgtataaatatttagacgagaaccaatttttgtaagcaacttataggttatatgaa 11917548  T
Q  214 aataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctt-atttttaagatgttggtccaaacagggc 312  Q
    ||||||||||||||||||||||||||| ||||||||||      ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  11917547 aataatttgactttattttatcttttgttacaaaaata------acataaacacttgtatgataagcgcttaatttttaagatgttggtccaaacaggtc 11917454  T
Q  313 ccaagtctaagttgaatcaaatgtatcaatacccctttctatttctta-ttttgatttccttggt 376  Q
    ||||| |||||||||||||||||||| |   ||||||||||||||||| ||||||||||||||||    
T  11917453 ccaagactaagttgaatcaaatgtatga--ccccctttctatttcttatttttgatttccttggt 11917391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 282
Target Start/End: Complemental strand, 49219147 - 49219059
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgc 282  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||| || | ||||||||||||| ||| ||||  ||||||||||||    
T  49219147 caacttatagcttatatgaaaataatttgactttattttatattttgttatagaaataacttatacctaaccactcatatgataagcgc 49219059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 274
Target Start/End: Complemental strand, 4071890 - 4071811
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatg 274  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| || | |||| | ||||| |||||||||| ||||    
T  4071890 caacttatagcttatatgaaaataatttgactttattttatcttttgttatagaaat-agttatatataaacacttatatg 4071811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 210 - 285
Target Start/End: Original strand, 28581988 - 28582062
Alignment:
Q  210 tgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    |||||||| |||||||||||||||||||||| || |||||||  |||||||||||||||| ||||||||| |||||    
T  28581988 tgaaaatagtttgactttattttatcttttgcta-aaaaatagtttatacataaacacttctatgataagtgctta 28582062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 42321941 - 42322016
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||||  ||||||||||| ||||||||||||||||||| |||| || ||||||| ||||| |||||||||||    
T  42321941 caacttataatttatatgaaaacaatttgactttattttatcatttgttataaaaatagcttattcataaacactt 42322016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 284
Target Start/End: Complemental strand, 30024704 - 30024618
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctt 284  Q
    |||||| ||||||||||| ||||| |||||||||||||||||| || | ||||||||||| |||||  |||| |||||||| |||||    
T  30024704 ttatagcttatatgaaaacaattttactttattttatcttttgttatagaaataacttatgcataagtacttatatgataaacgctt 30024618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 19422420 - 19422335
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    |||| |||||||||||   |||||||||||| ||||||||| || | ||||||||||||||||| || || |||||||||||||||    
T  19422420 atagtttatatgaaaaatgtttgactttattatatcttttgttatagaaataacttatacataagcatttatatgataagcgctta 19422335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 55599149 - 55599082
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||||||| ||||||| ||||||| ||||||||| |||||||||| | ||||| ||||||||    
T  55599149 tttgactttattttgtcttttgttacaaaagtaacttatatataaacacttatgtgatacgcgcttat 55599082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 8422892 - 8422982
Alignment:
Q  185 ttgtgtaagcaacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 277  Q
    ||||| || |||||||||| ||||||||||| |||  ||||||||||||||||||  || ||||||| ||||||||||| ||| | |||||||    
T  8422892 ttgtgaaaacaacttatagcttatatgaaaacaat--gactttattttatctttttttataaaaatagcttatacataagcacatatatgata 8422982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 286
Target Start/End: Complemental strand, 24193593 - 24193501
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||  ||||||||||||| ||| ||| | |||||| ||||| |  |||||||||||||||||||  |||| ||||||||||| ||||    
T  24193593 caacttataacttatatgaaaatagtttaactctgttttatattttgttgtaaaaataacttatacataagtacttatatgataagcgtttat 24193501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 8130178 - 8130107
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||| ||||||||||||||||||||||||| |||||||||| || | ||| |||| |||| ||| |||||    
T  8130178 ttatagcttatatgaaaataatttgactttatgttatcttttgttatagaaagaactcatacgtaagcactt 8130107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 13949906 - 13949949
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatctt 237  Q
    |||||||||| ||||||||||| |||||||||||||||||||||    
T  13949906 caacttatagcttatatgaaaacaatttgactttattttatctt 13949949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 286
Target Start/End: Complemental strand, 26884001 - 26883910
Alignment:
Q  196 acttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgt-atgataagcgcttat 286  Q
    |||||||| ||||||||||| ||||| |||| ||||||||| ||  || | ||||||||||||||||| ||||| | | |||||||||||||    
T  26884001 acttatagcttatatgaaaacaatttaacttcattttatctcttcttagagaaataacttatacataatcacttatcaagataagcgcttat 26883910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 285
Target Start/End: Original strand, 30207633 - 30207723
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    |||||||||| ||||||||||| | ||||| |||||||||| ||||| || | || |||| ||||||||| ||||| ||||||||| |||||    
T  30207633 caacttatagcttatatgaaaacagtttga-tttattttattttttgttatagaactaacatatacataagcacttatatgataagtgctta 30207723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 35743298 - 35743223
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgct 283  Q
    ||||||| || |||| ||||||||||||||||| || | ||||||||| ||||| ||||| | |||||||||||||    
T  35743298 tatgaaagtagtttgcctttattttatcttttgttatagaaataacttgtacatcaacacatatatgataagcgct 35743223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 44119228 - 44119295
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaac 265  Q
    |||||| ||||||||||| |  |||||||| |||||||||||| || | |||||||||||||||||||    
T  44119228 ttatagcttatatgaaaacatattgactttgttttatcttttgctatagaaataacttatacataaac 44119295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 52735119 - 52735068
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataactta 256  Q
    |||||||||| ||||||||||||||||||||||||| |||| ||||| ||||    
T  52735119 ttatatgaaagtaatttgactttattttatcttttgttacagaaatagctta 52735068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 285
Target Start/End: Original strand, 3549590 - 3549683
Alignment:
Q  191 aagcaacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    |||||||| ||||||||||||||||| |||||| || ||||||||||||| || ||| | ||||||| ||| | ||||| ||| |||| ||||||    
T  3549590 aagcaactcataggttatatgaaaatcatttgatttgattttatcttttgttataaaga-aacttatgcattagcacttatataataaacgctta 3549683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 41606196 - 41606110
Alignment:
Q  192 agcaacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||| ||||||| |||||| | ||  |||||||||||||||||| |||| ||  ||||||  || ||||||||||||||||||||||    
T  41606196 agcagcttatagcttatataagaaccatttgactttattttatcctttgttatcaaaatagtttttacataaacacttgtatgataa 41606110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 51044546 - 51044596
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||||||||||||||||| || | ||||| |||||||||||||||||    
T  51044546 tttgactttattttatcttttgttatagaaatagcttatacataaacactt 51044596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 279
Target Start/End: Original strand, 54325102 - 54325184
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||  | | |||||  ||||||| || ||||| |||||||||    
T  54325102 cttatagcttatatgaaaacagtttgactttattttatcttttgtaatagaaatagtttatacacaagcacttatatgataag 54325184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 208 - 284
Target Start/End: Complemental strand, 4191734 - 4191657
Alignment:
Q  208 tatgaaaataatttgactttatttt-atcttttggtacaaaaataacttatacataaacacttgtatgataagcgctt 284  Q
    |||||||| | |||||||||||||| |||||||| || | ||||| ||||||||||| ||||| |||||||| |||||    
T  4191734 tatgaaaacagtttgactttatttttatcttttgttatagaaatagcttatacataagcacttatatgataaacgctt 4191657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 251
Target Start/End: Complemental strand, 10192292 - 10192235
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaata 251  Q
    |||||||||  ||||||||||| |||||||||||||| ||||||||| || |||||||    
T  10192292 caacttataacttatatgaaaacaatttgactttattctatcttttgttataaaaata 10192235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 22684589 - 22684666
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgc 282  Q
    ||||||||||| ||||||||||||||||| | |||| || | ||||| |||||||| || || || ||||||||||||    
T  22684589 ttatatgaaaacaatttgactttattttaccgtttgttatagaaatagcttatacagaagcatttatatgataagcgc 22684666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 27623640 - 27623579
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttata 258  Q
    ||||||| |||||| |||||| |||||||||||||||||||||| || | ||||| ||||||    
T  27623640 cttatagcttatattaaaatagtttgactttattttatcttttgttatacaaatatcttata 27623579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 36734890 - 36734817
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||||||||||| ||||||||||||||| |||||| || | ||| |  |||||||||| ||||| ||||||||    
T  36734890 ttatatgaaaatagtttgactttattttaccttttgttatagaaagagattatacataagcacttatatgataa 36734817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 40865806 - 40865746
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaaca 266  Q
    ||||||||||||| |||||||||||| ||||||||| || |||||||  |||||||||||||    
T  40865806 ttatatgaaaata-tttgactttattctatcttttgttagaaaaatagtttatacataaaca 40865746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 47970310 - 47970245
Alignment:
Q  210 tgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatga 275  Q
    |||||||| |||||||| ||||||||||||| || | ||||| ||||||||||| ||||| |||||    
T  47970310 tgaaaatagtttgacttcattttatcttttgttatagaaatagcttatacataagcacttatatga 47970245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 278
Target Start/End: Original strand, 51555956 - 51556013
Alignment:
Q  221 tgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||||||||||||||| || || |||| ||||||||||| ||||| ||||||||    
T  51555956 tgactttattttatcttttgttataataatagcttatacataagcacttatatgataa 51556013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 286
Target Start/End: Complemental strand, 486073 - 485997
Alignment:
Q  211 gaaaataatttgacttt-attttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||| ||||||||||| ||||||||||||| |  | ||||| | ||||||||| ||||| ||||||||||||||||    
T  486073 gaaaacaatttgacttttattttatcttttgttttagaaatagcatatacataagcacttttatgataagcgcttat 485997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 3249800 - 3249868
Alignment:
Q  218 atttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||||||| |||||||   | | |||||||||| ||||| |||||| ||||||||||||||||    
T  3249800 atttgactttatttcatcttttatcatagaaataacttacacatacacacttatatgataagcgcttat 3249868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 286
Target Start/End: Complemental strand, 24444046 - 24443954
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||| ||||||||||||  ||||| |||||||||| ||||| |  | ||||  |||||||||||  |||| ||||||||| ||||||    
T  24444046 caacttatagcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttat 24443954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 277
Target Start/End: Original strand, 32920462 - 32920543
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 277  Q
    |||||||||| || ||| ||||  ||||||||||||||||||  ||| || ||||||| ||||| ||||||||||| |||||||    
T  32920462 caacttatagcttctattaaaacgatttgactttattttatc--ttgttataaaaatagcttatccataaacacttatatgata 32920543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 286
Target Start/End: Original strand, 45128376 - 45128464
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||| |||||||| |||||||||| || ||||||||||||| || | |||||  ||||||||||   ||| ||||||||| ||||||    
T  45128376 ttatagcttatatgagaataatttgatttgattttatcttttgttatagaaatagtttatacataagttcttatatgataagggcttat 45128464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 275
Target Start/End: Complemental strand, 7022662 - 7022595
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatga 275  Q
    |||||||||||||||||| |||||||||||||  || ||||||| ||||||  ||| ||||| |||||    
T  7022662 tatgaaaataatttgactctattttatcttttcttataaaaatagcttataattaagcacttatatga 7022595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 18630697 - 18630642
Alignment:
Q  185 ttgtgtaagcaacttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||| || |||||||||| |||||||||||  | |||||||||||||||||||||    
T  18630697 ttgtgaaaacaacttatagcttatatgaaaaccaattgactttattttatcttttg 18630642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 278
Target Start/End: Complemental strand, 23819045 - 23819014
Alignment:
Q  247 aaataacttatacataaacacttgtatgataa 278  Q
    ||||||||||||||||||||||||||||||||    
T  23819045 aaataacttatacataaacacttgtatgataa 23819014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 281
Target Start/End: Original strand, 24160557 - 24160644
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcg 281  Q
    |||||||||| ||| ||||||||| ||||| ||||| |||||||||| || | ||| | |||||  |||| ||||| |||||||||||    
T  24160557 caacttatagcttacatgaaaatagtttgaatttatattatcttttgttatagaaaaagcttatttataagcacttatatgataagcg 24160644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 240
Target Start/End: Complemental strand, 32724116 - 32724081
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||||||||||| ||||||||||||||||||||||    
T  32724116 ttatatgaaaatagtttgactttattttatcttttg 32724081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 44007940 - 44007983
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttggta 243  Q
    |||| ||||||||||| |||||| ||||||||||||||||||||    
T  44007940 atagcttatatgaaaacaatttgtctttattttatcttttggta 44007983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 46859935 - 46859892
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||||| || ||||||||| |||||||||||||||||||||||    
T  46859935 cttatagattgtatgaaaatgatttgactttattttatcttttg 46859892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 6364154 - 6364088
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    ||||||| |||| |||| | ||||| |||||||||||||||||| || | ||||| |||||||||||    
T  6364154 cttatagcttatgtgaacagaatttcactttattttatcttttgttatagaaatagcttatacataa 6364088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 15511425 - 15511483
Alignment:
Q  223 actttattttatctt-ttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    ||||||||||||||| ||| || ||||||||||||||||||| |||||  |||||||||    
T  15511425 actttattttatcttcttgttataaaaataacttatacataagcacttacatgataagc 15511483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 15969886 - 15969820
Alignment:
Q  220 ttgactttattttatcttttggt-acaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    ||||||||| ||||||||| | | | ||||||||||||||||||||||||||||  |||| ||||||    
T  15969886 ttgactttactttatctttcgtttataaaaataacttatacataaacacttgtactataaacgctta 15969820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 19040181 - 19040247
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaa 264  Q
    |||||| || ||||||| || |||||||||||||||||||||  || | ||||| ||||||||||||    
T  19040181 ttatagcttttatgaaattattttgactttattttatctttttctaaagaaatagcttatacataaa 19040247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 27321946 - 27321984
Alignment:
Q  247 aaataacttatacataaacacttgtatgataagcgctta 285  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  27321946 aaataacttatacataaacacttatatgataagccctta 27321984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 46013363 - 46013437
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||||  |||||| |||| | |||||||||||||||||||||| | || |||||  ||| ||||||||||||    
T  46013363 aacttataacttatataaaaacagtttgactttattttatcttttgttccagaaatagtttacacataaacactt 46013437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 46247225 - 46247151
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||||  |||||| |||| | |||||||||||||||||||||| | || |||||  ||| ||||||||||||    
T  46247225 aacttataatttatataaaaacagtttgactttattttatcttttgttccagaaatagtttacacataaacactt 46247151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 47119027 - 47119073
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||||||||| ||||||||||| ||||| ||||| ||||||||||||    
T  47119027 caacttatagcttatatgaaaacaatttaactttgttttatcttttg 47119073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 53192416 - 53192454
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttatttta 233  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  53192416 aacttatagattctatgaaaataatttgactttatttta 53192454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 286
Target Start/End: Complemental strand, 54414949 - 54414865
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataa---cttatacataaacacttgtatgataagcgcttat 286  Q
    ||||| |||||||  ||||||||||||| |||||   || ||||||||   ||||||||||| ||||| ||||||||||||||||    
T  54414949 ttataggaaaatagattgactttattttctctttctttataaaaataatagcttatacataagcacttatatgataagcgcttat 54414865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 55437354 - 55437388
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttat 234  Q
    |||| ||||||||||||||||||||||||||||||    
T  55437354 atagcttatatgaaaataatttgactttattttat 55437388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 24091467 - 24091434
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattt 231  Q
    |||||| |||||||||||||||||||||||||||    
T  24091467 ttatagcttatatgaaaataatttgactttattt 24091434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 24160998 - 24160929
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    ||||||||||  || ||||||||||||| |||| |||||||| |||| || | ||||| |||||||||||    
T  24160998 caacttatagcctacatgaaaataatttaacttgattttatcctttgttatagaaatagcttatacataa 24160929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 279
Target Start/End: Complemental strand, 24929501 - 24929416
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    |||||||||| || |||||||| | || ||||||||||||||||||| || | |||||  | ||||| ||||| || |||||||||    
T  24929501 caacttatagcttttatgaaaacagttagactttattttatcttttgttatagaaatagttcatacaaaaacaattatatgataag 24929416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 25434522 - 25434567
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatctttt 239  Q
    |||||||||| ||||||||||| |  ||||||||||||||||||||    
T  25434522 caacttatagcttatatgaaaacatattgactttattttatctttt 25434567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 49803208 - 49803151
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 262  Q
    |||| |||||| ||||| |||| ||||||||||||| || | ||||||||||||||||    
T  49803208 ttatgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 49803151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 50746008 - 50745939
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||||| ||| |||||| |||| | ||||| |||||||||||||||| || ||||||| |||| ||||||    
T  50746008 caacttgtagtttatataaaaacagtttgattttattttatcttttgttataaaaatagcttagacataa 50745939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 53626781 - 53626717
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttg--gtacaaaaataacttatac 259  Q
    ||||||| ||||||||||| | ||||| ||||||||||||||||   || |||||||||||||||    
T  53626781 cttatagcttatatgaaaacattttgaatttattttatcttttgttatagaaaaataacttatac 53626717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 20936070 - 20936110
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||| ||| ||||||||| ||||||||||||||||||||||    
T  20936070 atagcttacatgaaaatagtttgactttattttatcttttg 20936110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 21193981 - 21193937
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||||||||||||||||||||  || ||||||| |||||||||||    
T  21193981 tttgactttattttatcttttactataaaaatagcttatacataa 21193937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 21952966 - 21952930
Alignment:
Q  197 cttataggttatatgaaaataatttgactttatttta 233  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  21952966 cttatagcttatatgaaaacaatttgactttatttta 21952930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 27968120 - 27968072
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaacac 267  Q
    ||||||||||||||||| |||| || ||||||||||| || ||||||||    
T  27968120 tttgactttattttatcatttgttataaaaataacttttatataaacac 27968072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 29194476 - 29194524
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataac 253  Q
    ||||||||||||| ||||| ||||||||||||||||  || ||||||||    
T  29194476 ttatatgaaaatagtttgattttattttatcttttgtcacgaaaataac 29194524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 274
Target Start/End: Original strand, 43372035 - 43372111
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatg 274  Q
    |||||| |||||| |||| | ||||||| |||||||||||||| || ||||||| |||||   ||||||||| ||||    
T  43372035 ttatagcttatataaaaacagtttgactgtattttatcttttgttataaaaataccttatgtttaaacacttatatg 43372111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 55870403 - 55870459
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaat 250  Q
    |||||||||| |||| |||||| | ||||||||||||| |||||||| || ||||||    
T  55870403 caacttatagcttatgtgaaaacagtttgactttatttgatcttttgttataaaaat 55870459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 278
Target Start/End: Original strand, 41620365 - 41620437
Alignment:
Q  206 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  41620365 tatatgaacataatttgactttattttatcttttgttacaaaaataacttatatataagcacttgtatgataa 41620437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 318
Target Start/End: Complemental strand, 2699303 - 2699192
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttatttttaagatgttggtcca 304  Q
    ||||||||||||| ||| |||||||||||| ||||| |  | |||||||||||| ||| |||| | ||||||| |||||||   ||| |||||| |||||    
T  2699303 ttatatgaaaatagtttaactttattttatattttgttgtagaaataacttatatatagacacgtatatgataggcgctta--attatgatgtttgtcca 2699206  T
Q  305 aacagggcccaagt 318  Q
    ||||||||||||||    
T  2699205 aacagggcccaagt 2699192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 38561734 - 38561645
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgct 283  Q
    ||||||||||  || || |||||| |||||||||||||||||||||| || | |||||||||||| ||| |||||| ||| |||||||||    
T  38561734 caacttatagtatagataaaaatagtttgactttattttatcttttgttatataaataacttatatatagacacttatataataagcgct 38561645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 4558803 - 4558731
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||  |||||||||||||||| |||||||||||||||||  || | ||||| |||||||||||||||||    
T  4558803 cttatagcatatatgaaaataatttaactttattttatcttttattatagaaatagcttatacataaacactt 4558731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 198 - 286
Target Start/End: Complemental strand, 31884598 - 31884510
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||| ||||||||||| ||||  | || ||||||| ||||| || | ||||||||||||||||  ||||||||||||||||||||||    
T  31884598 ttatagcttatatgaaaacaattcaatttgattttatattttgttatagaaataacttatacatatgcacttgtatgataagcgcttat 31884510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 38874643 - 38874570
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||||||||| |||||||||  ||||||||||| | |||| ||| ||||||||||||||||||| || |||||    
T  38874643 ttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaacacttatacgataa 38874570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 40728505 - 40728566
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    |||||||||||||||||||||| || | ||||||||||| ||| ||||||| ||||||||||    
T  40728505 tttgactttattttatcttttgttatagaaataacttatgcatgaacacttatatgataagc 40728566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 1470921 - 1470985
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 261  Q
    ||||||| |||||||||| ||||||||||||||||||||||||  || | ||||| |||||||||    
T  1470921 cttatagcttatatgaaagtaatttgactttattttatcttttattatagaaatagcttatacat 1470985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 200 - 280
Target Start/End: Complemental strand, 11494155 - 11494075
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    |||| ||||||||||| | ||||||||||| |||||||||| ||  |||||||| |||||| || ||||| ||||||||||    
T  11494155 atagtttatatgaaaaaagtttgactttatgttatcttttgttatgaaaataacatatacaaaagcacttatatgataagc 11494075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 14482192 - 14482124
Alignment:
Q  212 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    |||| |||||||||||||||||||||||| || | |||||  |||||||||| ||||| ||||||||||    
T  14482192 aaaacaatttgactttattttatcttttgttatagaaatagtttatacataagcacttatatgataagc 14482124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 286
Target Start/End: Original strand, 34788493 - 34788581
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||| ||||||| ||| | |||||||||||||||||||| |  | ||||||| ||||||| ||| || || ||||||||||||||||    
T  34788493 ttatagcttatatggaaacagtttgactttattttatctttggtcataaaaatagcttatacgtaagcatttatatgataagcgcttat 34788581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 40357893 - 40357821
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    |||||||||||||| |||||||||||||||||| || |  || | |||||||||||| |||| ||||||||||    
T  40357893 tatgaaaataattttactttattttatcttttgttatatcaagagcttatacataaatacttatatgataagc 40357821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 280
Target Start/End: Original strand, 29056064 - 29056139
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    ||||||||||| || ||||||||||||||||||||| |  | || || ||||||||||||||||||| ||| ||||    
T  29056064 ttatatgaaaacaaattgactttattttatcttttgctctagaagtagcttatacataaacacttgtttgacaagc 29056139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 40280281 - 40280356
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgct 283  Q
    |||||||| ||||| |||||||||||||||||| |  | |||||||||||| |||  ||||| |||||||||||||    
T  40280281 tatgaaaacaattttactttattttatcttttgttgtagaaataacttatatataggcacttatatgataagcgct 40280356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 26820204 - 26820142
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatac 259  Q
    ||||||| |||||  |||||| |||||||||||||||||||||| || | |||||||||||||    
T  26820204 cttatagtttataacaaaatagtttgactttattttatcttttgttatagaaataacttatac 26820142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 34770900 - 34770854
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  34770900 caacttatagcttaaatgaaaacaatttgactttattttatcttttg 34770854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 2364558 - 2364619
Alignment:
Q  217 aatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||||||||||||||||||| || ||||||| | |||||||||| | || ||||||||    
T  2364558 aatttgactttattttatcttttgctataaaaatagcgtatacataaatagttatatgataa 2364619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 7026728 - 7026655
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||||||||| ||||| |||||||||||||||||| || || | || ||||| ||||| ||||| ||||||||    
T  7026728 ttatatgaaaacaattttactttattttatcttttgttataacagtagcttatgcataagcacttatatgataa 7026655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 35298539 - 35298624
Alignment:
Q  194 caacttataggttatat-gaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||||| |||||| |||||   |||| ||||||||||||||||| |||  ||||| ||||||||||| ||||| ||||||||    
T  35298539 caacttatagtttatattgaaaactgtttggctttattttatcttttgttactgaaatagcttatacataagcacttatatgataa 35298624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 41336718 - 41336799
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||||||| ||||||||| ||||||||||||||  | |||||| | |||||||||| || || | |||||| |||||||    
T  41336718 ttatatgaaaacaatttgactatattttatcttttgtcataaaaatgatttatacataagcatttatttgataaacgcttat 41336799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 42597409 - 42597340
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||||||||| ||  ||||||| ||||| |||||||||||||||||| || | ||||| |||||||||||    
T  42597409 caacttatagcttgcatgaaaacaattttactttattttatcttttgttatagaaatagcttatacataa 42597340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 286
Target Start/End: Original strand, 11056729 - 11056821
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||| ||||||||||||| ||  ||||||||||  |||||| || | ||||| || || ||| ||||||| ||||||||| ||||||    
T  11056729 caacttatagcttatatgaaaatagttcaactttatttttccttttgttatagaaatagctcatgcatgaacacttatatgataagagcttat 11056821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 12224974 - 12225030
Alignment:
Q  207 atatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    ||||||||||| ||||||||||||||||||||||    | |||||||||||||||||    
T  12224974 atatgaaaatagtttgactttattttatcttttgtcttagaaataacttatacataa 12225030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 29262947 - 29262979
Alignment:
Q  205 ttatatgaaaataatttgactttattttatctt 237  Q
    |||||||||||||||||||||||||||||||||    
T  29262947 ttatatgaaaataatttgactttattttatctt 29262979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 286
Target Start/End: Complemental strand, 35869845 - 35869753
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||| ||||||||||||  ||||| |||||||||| ||||| |  | ||||  |||||||||||  |||| ||||||||| ||||||    
T  35869845 caacttatagcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttat 35869753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 240
Target Start/End: Complemental strand, 2100802 - 2100767
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||||||||||| ||||||||||||||||||||||    
T  2100802 ttatatgaaaatattttgactttattttatcttttg 2100767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 29699237 - 29699178
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||||||||||||||||| || | ||||||||| ||||||| || || ||||||||    
T  29699237 tttgactttattttatcttttgttatagaaataacttgtacataagcatttatatgataa 29699178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 29973089 - 29973014
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||||| |||| |||||||| ||||||||||||||| ||| || || | ||||| |||||| |||| |||||    
T  29973089 caacttatagcttatgtgaaaatagtttgactttattttaccttgtgttaaagaaatagcttatatataagcactt 29973014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 39392748 - 39392815
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||||||||||||||| || | |||||  |||||||||  ||||| |||||||||| |||||    
T  39392748 tttgactttattttatcttttgttatagaaatagtttatacatagccacttatatgataagcacttat 39392815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 249
Target Start/End: Original strand, 42237488 - 42237539
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaa 249  Q
    |||||| ||||||||||| ||||| |||||||||||||||||| || |||||    
T  42237488 ttatagcttatatgaaaacaatttaactttattttatcttttgttataaaaa 42237539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 3537093 - 3537139
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||||||    
T  3537093 caacctatagcttatacgaaaacaatttgactttattttatcttttg 3537139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 3945281 - 3945207
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||||| |||||| ||||||  || | |||||||||||||||| ||   |||||||||||| ||||||||||    
T  3945281 aacttatagcttatataaaaatagcttcattttattttatcttttgttattgaaataacttatatataaacactt 3945207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 12361197 - 12361131
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    ||||||| ||||||||||| |||||||||| |||||||||||   || | |||||||||||| ||||    
T  12361197 cttatagcttatatgaaaacaatttgacttcattttatctttatttatagaaataacttatatataa 12361131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 14949882 - 14949812
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||| | ||||||| |||||||||||||| || | || || |||||||||||  |||||||||||||    
T  14949882 tatgaaaagagtttgactctattttatcttttgttatagaagtagcttatacataagaacttgtatgataa 14949812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 26215493 - 26215435
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    ||||| ||||||| ||| |||||||||||||||||| || | ||||| |||||||||||    
T  26215493 ttatacgaaaatagtttaactttattttatcttttgttatagaaatagcttatacataa 26215435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Original strand, 27728094 - 27728128
Alignment:
Q  205 ttatatgaaaataatttgactttattttatctttt 239  Q
    ||||||||||||| |||||||||||||||||||||    
T  27728094 ttatatgaaaatagtttgactttattttatctttt 27728128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 278
Target Start/End: Original strand, 31315533 - 31315598
Alignment:
Q  212 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||| |||||||||||||||||||||  || ||||||| ||||||||  ||||||| ||||||||    
T  31315533 aaaatagtttgactttattttatcttttattataaaaatagcttatacactaacactt-tatgataa 31315598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 34563244 - 34563174
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||||  ||||||||||||||||| ||||  | | |||||||||||| |||| ||||| ||||||||    
T  34563244 tatgaaaattgtttgactttattttatcctttgtcatagaaataacttatatataagcacttatatgataa 34563174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 1112858 - 1112785
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttg 270  Q
    ||||||| |||| |||||| ||||| || ||||||||||||||| || | ||||| | ||||||||| ||||||    
T  1112858 cttatagcttatgtgaaaacaatttaaccttattttatcttttgttatagaaatagcatatacataagcacttg 1112785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 286
Target Start/End: Original strand, 28769404 - 28769493
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||| ||||| ||||||| |||||||| |||||||  |||| || |  |||| ||||||||||| || || |||||||||| |||||    
T  28769404 cttatagcttataagaaaatagtttgacttaattttatagtttgttataggaatagcttatacataagcatttatatgataagcacttat 28769493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 31705090 - 31705025
Alignment:
Q  197 cttataggttatatgaaaa-taatttgactttattttatcttttggtacaaaaataacttatacat 261  Q
    ||||||| ||||||||||  ||||||||| | |||||||||||| ||||| ||||| |||||||||    
T  31705090 cttatagcttatatgaaacgtaatttgacatgattttatcttttagtacagaaatagcttatacat 31705025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 278
Target Start/End: Original strand, 33209285 - 33209366
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||||| ||||||||||| | || |||||||||||||||||   || | ||||| |||||  ||| |||||||||||||||    
T  33209285 cttatagtttatatgaaaacagttcgactttattttatctttcattatagaaatagcttatttatagacacttgtatgataa 33209366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 787172 - 787252
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||| |||||||| || ||||||||||||||||||||| || |||  ||| | |||| |||||| |||||  |||||||    
T  787172 ttatagcttatatgataacaatttgactttattttatcttatgttacggaaacagcttaaacataagcacttagatgataa 787252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 285
Target Start/End: Complemental strand, 4511025 - 4510945
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    |||||||| || ||||||||||| ||| |||||||| |   |||||| |||||| |||| || ||| ||||||||||||||    
T  4511025 ttatatgagaaaaatttgactttttttaatcttttgtttacaaaatagcttataaataagcaattgcatgataagcgctta 4510945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 7878551 - 7878587
Alignment:
Q  197 cttataggttatatgaaaataatttgactttatttta 233  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  7878551 cttatagcttatatgaaaacaatttgactttatttta 7878587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 10062218 - 10062262
Alignment:
Q  223 actttattttatcttttggtacaaaaataacttatacataaacac 267  Q
    ||||||| || |||||||||| | |||||||||||||||||||||    
T  10062218 actttatcttttcttttggtatagaaataacttatacataaacac 10062262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 10939385 - 10939325
Alignment:
Q  224 ctttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctt 284  Q
    |||||||||||||||||  | | |||||||||||||||||||| | |||| ||||| ||||    
T  10939385 ctttattttatcttttgtaatagaaataacttatacataaacagtagtataataagtgctt 10939325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 11376714 - 11376670
Alignment:
Q  191 aagcaacttataggttatatgaaaataatttgactttattttatc 235  Q
    ||||| ||||||| |||||| ||||||||| ||||||||||||||    
T  11376714 aagcatcttatagcttatatcaaaataattagactttattttatc 11376670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 35374439 - 35374479
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttt 238  Q
    |||||| ||||||||||| ||||| ||||||||||||||||    
T  35374439 ttatagcttatatgaaaacaatttaactttattttatcttt 35374479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 286
Target Start/End: Original strand, 35135725 - 35135816
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||| || | ||||| ||||||||||||||||| |||| ||||| |||||    
T  35135725 aacttatagcttatatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataaacacttatatgttaagcacttat 35135816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 4991016 - 4991097
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||||||| ||||  |||| |||||||||| || ||||||| |||||||| |||||||| |||||||| |||||||    
T  4991016 ttatatgaaaataaattgatcttatgttatcttttgttataaaaatagcttatacacaaacacttatatgataatcgcttat 4991097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 194 - 279
Target Start/End: Complemental strand, 36539754 - 36539669
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    |||||||||| ||||||||||| |  ||||||||||||||||||||| || | ||||| |||| |||||| ||||| |||||||||    
T  36539754 caacttatagcttatatgaaaacaggttgactttattttatcttttgataaacaaatagcttacacataagcacttatatgataag 36539669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 276
Target Start/End: Original strand, 7096203 - 7096271
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgat 276  Q
    |||||||||  |||||||||||||||||||||| || | ||||| ||||||||||| ||||||||||||    
T  7096203 tatgaaaatggtttgactttattttatcttttgttatagaaatagcttatacataagcacttgtatgat 7096271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 194 - 286
Target Start/End: Complemental strand, 9927593 - 9927501
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||| | ||||||||||| |||||||| | ||||||||||||  || | |||||||||||||||||||||||   ||||||| ||||||    
T  9927593 caacttatcgcttatatgaaaacaatttgacgtaattttatcttttactatacaaataacttatacataaacacttacttgataagtgcttat 9927501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 197 - 279
Target Start/End: Original strand, 32059654 - 32059735
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    ||||||| ||||||||||| | ||||||||||||||||| || | |||||||| | ||||||||||| ||||| |||||||||    
T  32059654 cttatagcttatatgaaaacagtttgactttattttatc-ttagttacaaaaacagcttatacataagcacttatatgataag 32059735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 5284762 - 5284827
Alignment:
Q  220 ttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||||| || |  |||||||||||    
T  5284762 ttgactttattttatcttttgttacaaaaatagcatatacataaacacgtgcacaataagcgctta 5284827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 29116998 - 29117083
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    |||| ||||| ||||| | |||||||||||||||||||||| || | ||||||| ||||||||| ||  | |||||||||||||||    
T  29116998 atagcttatacgaaaacagtttgactttattttatcttttgttatagaaataacatatacataatcagctatatgataagcgctta 29117083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 286
Target Start/End: Complemental strand, 32172658 - 32172569
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||| ||||||| ||| || ||||||| ||||||||||||| |  | |||||  |||||||||| | ||||||||||||||||||||    
T  32172658 cttatagcttatatgtaaacaacttgacttcattttatcttttgttgtagaaatagtttatacataagctcttgtatgataagcgcttat 32172569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 38047929 - 38047986
Alignment:
Q  206 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    ||||||||||||||||||||||||||||||||||| || | | ||| |||||||||||    
T  38047929 tatatgaaaataatttgactttattttatcttttgttagagatatagcttatacataa 38047986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 285
Target Start/End: Original strand, 912710 - 912802
Alignment:
Q  194 caacttataggttatatgaaaataattt-gactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    |||||||| | ||||||||||| ||||| ||||||||||||| || || || | ||||||||||| ||||||| ||| |||||||||| ||||    
T  912710 caacttattgcttatatgaaaacaattttgactttattttatattgtgttatagaaataacttattcataaacgcttatatgataagcactta 912802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 9202821 - 9202885
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||||||| ||||| |||||||||||||||||| |||| ||||| |||||| |||| |||||    
T  9202821 ttatatgaaaacaatttaactttattttatcttttgctacagaaatagcttatatataagcactt 9202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 42181145 - 42181245
Alignment:
Q  185 ttgtgtaagcaacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctt 284  Q
    ||||| || |||||||||| |||||||||||  |||||||||| |||||||||||| || ||||||| || | |||| |  |||| | ||||||||||||    
T  42181145 ttgtgcaaacaacttatagcttatatgaaaaccatttgactttgttttatcttttgttataaaaatagctgacacattattacttatgtgataagcgctt 42181244  T
Q  285 a 285  Q
    |    
T  42181245 a 42181245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 268
Target Start/End: Original strand, 34117595 - 34117669
Alignment:
Q  191 aagcaacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacact 268  Q
    ||||||||||||| ||||||| |||||||   || ||||||||||||||| || | ||||||||||||||||| ||||    
T  34117595 aagcaacttatagcttatatgtaaataat---accttattttatcttttgttaaagaaataacttatacataagcact 34117669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 280
Target Start/End: Original strand, 37063147 - 37063222
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    ||||||||||||| |||||||||||||||||||||| || | |||||  |||||||||| || || ||||| ||||    
T  37063147 ttatatgaaaatagtttgactttattttatcttttgttatagaaatagtttatacataagcatttatatgacaagc 37063222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 12407752 - 12407813
Alignment:
Q  223 actttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    |||||||||||||||||| || | ||||| ||||||||| ||||||||||||||||| |||||    
T  12407752 actttattttatcttttgttatagaaatagcttatacat-aacacttgtatgataagagctta 12407813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 276
Target Start/End: Original strand, 18704098 - 18704179
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgat 276  Q
    |||||||||| |||||| ||||||  |||||||||||| |||||||| || | |||||||||||||||||  |||| ||||||    
T  18704098 caacttatagcttatataaaaatagcttgactttattt-atcttttgttatagaaataacttatacataagaacttatatgat 18704179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 286
Target Start/End: Original strand, 20982223 - 20982289
Alignment:
Q  220 ttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||||||||| |||| || | ||||| ||||||||||| ||||| |||||||||| |||||    
T  20982223 ttgactttattttatcctttgttatagaaatagcttatacataagcacttatatgataagcacttat 20982289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 38766920 - 38766998
Alignment:
Q  209 atgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttatt 287  Q
    ||||||||| ||| ||||||||||| |||||| || | |||||||| || ||| ||||||| ||| |||||||||||||    
T  38766920 atgaaaatagtttaactttattttagcttttgttatagaaataactcatccattaacacttatatcataagcgcttatt 38766998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 6733966 - 6734038
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||||||||| ||||| |||||||||||||||| | || |||||||  |||| ||||||||||| ||||||||    
T  6733966 ttatatgaaaacaattt-actttattttatctttcgttataaaaatagattatgcataaacacttatatgataa 6734038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 26516275 - 26516214
Alignment:
Q  225 tttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||||||||| |  | ||||| ||||||||||| ||||| ||||||||||||||||    
T  26516275 tttattttatcttttgttttagaaatagcttatacataagcacttatatgataagcgcttat 26516214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 36796771 - 36796836
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 262  Q
    ||||||| |||| |||||||||||| || ||||||||| ||||| | || ||||||||||||||||    
T  36796771 cttatagcttatgtgaaaataatttaaccttattttattttttgttgcagaaataacttatacata 36796836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 286
Target Start/End: Original strand, 39823183 - 39823276
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataa-cttatacataaacacttgtatgataagcgcttat 286  Q
    |||||| ||| |||||||||| || |||||||||||||||||||||| || | |||||| || |||||||| | ||| ||| | ||||||||||    
T  39823183 caacttgtagcttatatgaaagtagtttgactttattttatcttttgttatataaataatctgatacataagcccttctataacaagcgcttat 39823276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 10907384 - 10907312
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||| |||||||||| || ||||| ||||||||| | || | || | |||||||||||||||||||||||    
T  10907384 cttatagattatatgaaagtagtttgattttattttaccattagctatagaaataacttatacataaacactt 10907312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 286
Target Start/End: Complemental strand, 11835268 - 11835192
Alignment:
Q  211 gaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgt-atgataagcgcttat 286  Q
    ||||| ||||| |||||||||||||||||| || ||||||   |||||||||||||||| | |||||||||| ||||    
T  11835268 gaaaacaatttaactttattttatcttttgttataaaaatggtttatacataaacacttatcatgataagcgtttat 11835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 32969185 - 32969225
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  32969185 atagcttatataaaaataatttgactttattttatcttttg 32969225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 35095868 - 35095936
Alignment:
Q  217 aatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    |||||||||||||||||||||||| || | |||||  ||| | |||| ||||| |||||||||||||||    
T  35095868 aatttgactttattttatcttttgttatagaaatagtttaaatataagcacttatatgataagcgctta 35095936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 35960421 - 35960338
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||||| |||||||||| || |||||||||||||||||||||  || | |||||  |||| |||||| |||| ||||||||    
T  35960421 caacttatagtttatatgaaa-tagtttgactttattttatcttttattatagaaatagtttatgcataaatacttatatgataa 35960338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 1636844 - 1636891
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaaca 266  Q
    ||||||||||||||||||| || |||| ||||||||||| ||||||||    
T  1636844 tttgactttattttatcttgtgatacagaaataacttattcataaaca 1636891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 6739855 - 6739788
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||||||||||||||||   || | |||| |||||||||||||| ||| |||||||| |||||||    
T  6739855 tttgactttattttatctttatttatagaaatgacttatacataaacgcttatatgataaacgcttat 6739788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 240
Target Start/End: Original strand, 8158374 - 8158409
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||||||||||||||| ||||||||||||||||||    
T  8158374 ttatatgaaaataatttaactttattttatcttttg 8158409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 9703302 - 9703365
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 257  Q
    |||||| ||| ||||||||||  | |||||||||||||||||| ||| |||| |||||||||||    
T  9703302 caacttgtagcttatatgaaatgagtttgactttattttatctcttgttacagaaataacttat 9703365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 240
Target Start/End: Complemental strand, 10303802 - 10303763
Alignment:
Q  201 taggttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  10303802 taggttaaatgaaaacaatttgactttattttatcttttg 10303763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 14295511 - 14295468
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||    
T  14295511 cttatagcttatatgaaaacagtttgactttattttatcttttg 14295468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 278
Target Start/End: Original strand, 17756808 - 17756875
Alignment:
Q  211 gaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||| ||||||||||||||||||||| || || | ||| |||| |||||||| ||||| ||||||||    
T  17756808 gaaaacaatttgactttattttatcttctgttaaagaaacaactcatacataagcacttatatgataa 17756875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 35550953 - 35550911
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||||| |||||||||||||||| |||||||||||||||||||    
T  35550953 cttatagtttatatgaaaataatt-gactttattttatcttttg 35550911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 240
Target Start/End: Complemental strand, 39750140 - 39750105
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||||||||||| ||||||||||||||||||||||    
T  39750140 ttatatgaaaatagtttgactttattttatcttttg 39750105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 583836 - 583878
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttattttatctt 237  Q
    ||||||||| ||||||||||| | |||||||||||||||||||    
T  583836 aacttatagcttatatgaaaacagtttgactttattttatctt 583878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 3952104 - 3952061
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatctttt 239  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||    
T  3952104 caacttataggttatatgaaa--aatttgtctttattttatctttt 3952061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 280
Target Start/End: Complemental strand, 38033940 - 38033890
Alignment:
Q  230 tttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    ||||||||||| || | ||||||||||||||||||||||| | ||||||||    
T  38033940 tttatcttttgttatataaataacttatacataaacacttatttgataagc 38033890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 40048359 - 40048417
Alignment:
Q  211 gaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||||| | |||||||||||||||||| || | ||| ||||||||||||| |||||    
T  40048359 gaaaataatataactttattttatcttttgttatagaaacaacttatacataagcactt 40048417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 4855706 - 4855637
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||||||||  |||||||| || ||||| |||||||||||| ||||| || ||||||| || ||||||||    
T  4855706 caacttataacttatatgataacaatttaactttattttattttttgttataaaaatagctaatacataa 4855637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 10272493 - 10272538
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatctttt 239  Q
    |||||||||| ||||| ||||| |||||||||| ||||||||||||    
T  10272493 caacttatagcttatacgaaaacaatttgacttaattttatctttt 10272538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 10391329 - 10391276
Alignment:
Q  226 ttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    ||||||||||||||| || ||||||| ||||||| ||| ||||| |||||||||    
T  10391329 ttattttatcttttgttataaaaatagcttatacgtaagcacttatatgataag 10391276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 11615493 - 11615452
Alignment:
Q  217 aatttgactttattttatcttttggtacaaaaataacttata 258  Q
    |||||||||||||||||||||||| || ||||||| ||||||    
T  11615493 aatttgactttattttatcttttgttataaaaatagcttata 11615452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 13224406 - 13224353
Alignment:
Q  225 tttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||||||||||| || | ||||| ||||||||||| ||||| ||||||||    
T  13224406 tttattttatcttttgttatagaaatagcttatacataagcacttctatgataa 13224353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 14932280 - 14932223
Alignment:
Q  212 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||| ||||| |||||||||||||||||| || |||||||  |||||||| |||||||    
T  14932280 aaaacaatttaactttattttatcttttgctataaaaatagattatacatgaacactt 14932223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 34205247 - 34205206
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatc 235  Q
    |||||||||| |||||| ||||||||||||||||| ||||||    
T  34205247 caacttatagcttatataaaaataatttgactttactttatc 34205206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 39128643 - 39128578
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||||| |||| ||| || |||||||||||||||||||||||| || | || || |||||||||||    
T  39128643 ttatagtttatttgagaacaatttgactttattttatcttttgttatagaattagcttatacataa 39128578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 12595808 - 12595848
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||| ||||||||||| ||||| ||||||||||||||||||    
T  12595808 atagtttatatgaaaacaatttaactttattttatcttttg 12595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 17498712 - 17498668
Alignment:
Q  225 tttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||||||||||| |||| ||||||||||||| ||| |||||    
T  17498712 tttattttatcttttgttacataaataacttatacctaagcactt 17498668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 19177487 - 19177403
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||||| ||||||||||| | || ||||| |||||||||| || |  | |||||  |||||||||| ||||| ||||||||    
T  19177487 caacttatagcttatatgaaaacagttagacttaattttatcttctgttgtagaaatagtttatacataagcacttatatgataa 19177403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 21782654 - 21782706
Alignment:
Q  217 aatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||||||||||||| |||||| || | ||||| |||| ||||||||||||    
T  21782654 aatttgactttattttagcttttgttatagaaatagcttaaacataaacactt 21782706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 28586839 - 28586911
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 277  Q
    ||||||||||| | |||||||||||||||||||||| || | |||||   ||||||||| ||| | |||||||    
T  28586839 ttatatgaaaacagtttgactttattttatcttttgttatagaaatagtgtatacataaccacatatatgata 28586911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 286
Target Start/End: Complemental strand, 40534193 - 40534110
Alignment:
Q  205 ttatatgaaaataatttgactttattttatctttt--ggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||||||||||| ||| ||||||| |||||||   ||| | ||||| |||||||||||   ||| ||||||||||||||||    
T  40534193 ttatatgaaaataatgtgattttatttcatcttttcgtgtatagaaatagcttatacataagtccttatatgataagcgcttat 40534110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 194 - 277
Target Start/End: Complemental strand, 37788868 - 37788786
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 277  Q
    |||||||||| ||||| |||||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  37788868 caacttatagattatacgaaaataattggactttattttatcttttgtta-taaaataacttatacataaacacttgtatgata 37788786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 38462277 - 38462204
Alignment:
Q  206 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    |||||||||| | ||||||||||||||||||||||||| | ||||| |||||| |||||||||| |||||||||    
T  38462277 tatatgaaaacagtttgactttattttatcttttggtatagaaatagcttataaataaacacttatatgataag 38462204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 1395673 - 1395611
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 262  Q
    |||| |||||||||||||||||||||||||||||||||||| || | ||||| ||||||||||    
T  1395673 atagcttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacata 1395611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 16790432 - 16790502
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||||||||||| |||||||||||| ||| || ||||||| ||||||||||| ||||| ||||||||    
T  16790432 tatgaaaataatttgattttattttatctgttgttataaaaatagcttatacataagcacttatatgataa 16790502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 260
Target Start/End: Complemental strand, 29771817 - 29771751
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttataca 260  Q
    |||||||||| ||||||||||||||||| |||||| ||| |||||||||| | ||||||||||||||    
T  29771817 caacttatagtttatatgaaaataatttcactttactttgtcttttggtatagaaataacttataca 29771751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 279
Target Start/End: Original strand, 33307653 - 33307727
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    ||||||||||||||||||||||||||| || ||||| |||  ||||| ||||||||||| ||||| |||||||||    
T  33307653 ttatatgaaaataatttgactttatttcatattttgttactgaaatagcttatacataagcacttatatgataag 33307727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 36783402 - 36783488
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataac-ttatacataaacacttgt-atgataagcgctt 284  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||| | ||||| | |||||||||||||||| | |||||||||||||    
T  36783402 atagtttatatgaaaacaattttactttattttatcttttggtatagaaatagctttatacataaacacttatcatgataagcgctt 36783488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 278
Target Start/End: Original strand, 43116492 - 43116574
Alignment:
Q  196 acttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||| ||||||||||||  ||||| || ||||||||||||| || | ||||| |||| |||||||||||||||||||||    
T  43116492 acttatagcttatatgaaaattgtttgatttgattttatcttttgttatagaaatagcttacacataaacacttgtatgataa 43116574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 3182438 - 3182515
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    |||||||| |||||||||||||||||||||||  || | || ||||||||||||||||||||  ||||||||| ||||    
T  3182438 tatgaaaacaatttgactttattttatctttttctatagaagtaacttatacataaacacttaaatgataagcactta 3182515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 20349549 - 20349629
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    |||||||||||||||| ||||| |||||||| |||| |||  ||||| |||||||| |||||||| |||||||||| ||||    
T  20349549 ttatatgaaaataattagacttcattttatcctttgttactgaaatagcttatacacaaacacttatatgataagcactta 20349629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 280
Target Start/End: Original strand, 44374720 - 44374792
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    |||||||| |||||||||||||||||||||||| || | | ||| ||||||||||| ||||| ||||||||||    
T  44374720 tatgaaaacaatttgactttattttatcttttgttaaagatatagcttatacataagcacttatatgataagc 44374792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 211 - 279
Target Start/End: Original strand, 49772747 - 49772815
Alignment:
Q  211 gaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    ||||| |||| ||||||||||||| ||||  |||||||||| ||||||||||||||||| |||||||||    
T  49772747 gaaaacaattagactttattttattttttattacaaaaatagcttatacataaacacttatatgataag 49772815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 48397654 - 48397587
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 261  Q
    |||||||||| ||| || |||| |||||||||||||||||||||||  || |||||||||||||||||    
T  48397654 caacttatagcttaaataaaaacaatttgactttattttatcttttattataaaaataacttatacat 48397587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 194 - 284
Target Start/End: Original strand, 22214743 - 22214833
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctt 284  Q
    |||||||||||||||||||| | ||||| ||||||||||||| |||| || | |||||| |||||||||  ||||| || |||||| ||||    
T  22214743 caacttataggttatatgaatacaatttcactttattttatcctttgttatagaaataatttatacatacgcacttatacgataagtgctt 22214833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 194 - 284
Target Start/End: Complemental strand, 28779364 - 28779274
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctt 284  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||  || || ||||| | |||||||| || || || ||||||||||||||    
T  28779364 caacttatagcttatatgaaaatagtttgactttatttcatctgatgttataaaaacagcttatacaaaagcaattatatgataagcgctt 28779274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 32555043 - 32555089
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||    
T  32555043 caacttatagcttataggaaaataatttgactttattttatcttttg 32555089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 3758042 - 3757981
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||| | |||||||||||||||| ||||| |||||||||| ||||||||||| |||||    
T  3758042 tatgaaaagagtttgactttattttatattttgttacaaaaatagcttatacataagcactt 3757981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 4990630 - 4990691
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaaca 266  Q
    ||||||||||| | |||||||| |||||||| |||| |||| ||||||||||||||||||||    
T  4990630 ttatatgaaaaaagtttgacttcattttatcctttgatacagaaataacttatacataaaca 4990691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 20192671 - 20192743
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||| |||||||||||   |||||||||||||||||||||| || | ||||| ||||||||||| |||||    
T  20192671 cttatagattatatgaaaactgtttgactttattttatcttttgttatataaatagcttatacataagcactt 20192743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 278
Target Start/End: Complemental strand, 32703142 - 32703062
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||| ||||||||||| ||||||| |||||||||||||||   | | ||||| |||||||||||||| || ||||||||    
T  32703142 ttatagcttatatgaaaacaatttgagtttattttatcttttataatagaaatagcttatacataaacatttatatgataa 32703062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 37689450 - 37689509
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 257  Q
    |||||| ||||||||||||||||| |||||| ||||||||||| || ||||||| |||||    
T  37689450 ttatagcttatatgaaaataatttaactttactttatcttttgttataaaaatagcttat 37689509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 279
Target Start/End: Complemental strand, 39971309 - 39971242
Alignment:
Q  212 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    |||| |||||| ||||||||||||||||| || | || |||||||||||||| ||||| |||||||||    
T  39971309 aaaacaatttggctttattttatcttttgttatataagtaacttatacataagcacttatatgataag 39971242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 24235745 - 24235811
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttataca 260  Q
    |||||||||| ||||||  ||||| ||||||||||| |||||||||| || | ||||||||||||||    
T  24235745 caacttatagcttatattcaaatagtttgactttatattatcttttgttatagaaataacttataca 24235811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 24605103 - 24605153
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||||||||| |||||||| || | |||||||||||||||||||||||    
T  24605103 tttgactttatttcatcttttgttatagaaataacttatacataaacactt 24605153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 48364956 - 48365010
Alignment:
Q  209 atgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    ||||||| |||||||||||||||||||||||| ||   |||||||||||||||||    
T  48364956 atgaaaacaatttgactttattttatcttttgttatcgaaataacttatacataa 48365010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 16790181 - 16790242
Alignment:
Q  225 tttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||||||||| || | |||||||||||| |||| ||||| |||||||| |||||||    
T  16790181 tttattttatcttttgttatagaaataacttatatataagcacttatatgataaacgcttat 16790242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 286
Target Start/End: Complemental strand, 22232823 - 22232742
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||||||| | ||||||||||||||||| |||| || | ||||| ||||||||| | || || ||||||||| ||||||    
T  22232823 ttatatgaaaacagtttgactttattttatcatttgttatataaatagcttatacatgagcatttatatgataagagcttat 22232742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 286
Target Start/End: Original strand, 24268228 - 24268309
Alignment:
Q  206 tatatgaaaataa-tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||| || |||||||| |||||| |||||| || | |||||  |||||||||| |||||||||||||| |||||||    
T  24268228 tatatgaaaaaaagtttgacttgattttaacttttgctatagaaatagtttatacataagcacttgtatgataaacgcttat 24268309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 25195419 - 25195386
Alignment:
Q  207 atatgaaaataatttgactttattttatcttttg 240  Q
    ||||||||||||||||||||||||||||||||||    
T  25195419 atatgaaaataatttgactttattttatcttttg 25195386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 27792869 - 27792796
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||||||||||| |||||| ||||||||||||||| |    ||||| ||||||||||| ||||| ||||||||    
T  27792869 ttatatgaaaatagtttgaccttattttatcttttgtttttgaaatagcttatacataagcacttatatgataa 27792796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 53736186 - 53736251
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttg 270  Q
    ||||||||||||| |||||| ||||||||||||||| || | |||||||| |||| ||| ||||||    
T  53736186 ttatatgaaaatagtttgacattattttatcttttgttatagaaataactcatacgtaagcacttg 53736251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 54775125 - 54775052
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||| |||||  |||||||||||||||||||||| || | |||||||||| || ||| ||||| ||||||||    
T  54775125 ttatataaaaatggtttgactttattttatcttttgttatagaaataacttaaacgtaagcacttttatgataa 54775052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 2865721 - 2865765
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttt 238  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||||    
T  2865721 caacttataggttatatgaaaacaatttgactttgttttaacttt 2865765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 8142803 - 8142847
Alignment:
Q  225 tttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||||||||||| || ||||||| |||||||||||||||||    
T  8142803 tttattttatcttttgatataaaaatagcttatacataaacactt 8142847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 10101549 - 10101601
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 257  Q
    ||||||||||| ||||| |||||||||||||||||| || | |||||||||||    
T  10101549 ttatatgaaaacaatttaactttattttatcttttgttatagaaataacttat 10101601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 10212474 - 10212526
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 257  Q
    ||||||||||| ||||| |||||||||||||||||| || | |||||||||||    
T  10212474 ttatatgaaaacaatttaactttattttatcttttgttatagaaataacttat 10212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 286
Target Start/End: Complemental strand, 21574495 - 21574408
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||| ||||||| ||| ||||| ||||||||||||||| | ||| ||||| |||| ||||||||||||||  |||| ||||| ||||    
T  21574495 ttatagcttatatgtaaacaatttaactttattttatcttgt-gtataaaaacaactcatacataaacacttacatgagaagcgtttat 21574408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 23530246 - 23530322
Alignment:
Q  194 caacttataggttatatgaaaa-taatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||||| || |||| || ||| ||| ||| |||||    
T  23530246 caacttatactttatatgaaaaataatttgactttattttatcttttgttagaaaactagcttctacgtaagcactt 23530322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 30669036 - 30669104
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaaca 266  Q
    |||||| ||||| ||||| ||||  || ||||||||||||||| || ||||||| ||||||||||||||    
T  30669036 ttatagtttataagaaaaaaattcaacattattttatcttttgttataaaaatagcttatacataaaca 30669104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 36646455 - 36646527
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 277  Q
    ||||||||||| ||||  ||||||||||||||||||  | | ||||| |||||| || |||||||||||||||    
T  36646455 ttatatgaaaacaattatactttattttatcttttgtcatagaaatagcttatatatcaacacttgtatgata 36646527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 280
Target Start/End: Original strand, 41028939 - 41028999
Alignment:
Q  220 ttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    ||||||||||||| ||||||| || | ||||| ||||||||||| ||||| ||||||||||    
T  41028939 ttgactttattttttcttttgttatagaaatagcttatacataagcacttatatgataagc 41028999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 32663636 - 32663566
Alignment:
Q  207 atatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||||||||  |||||| |||||| |||||||| || | ||||||||||| |||||||| |||||||||||    
T  32663636 atatgaaaattgtttgaccttattt-atcttttgttatagaaataacttatgcataaacaattgtatgataa 32663566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 36283659 - 36283703
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaac 265  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||||    
T  36283659 tttgactttattttatcttgt--tacaaaaataacttatacataaac 36283703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 285
Target Start/End: Complemental strand, 25129833 - 25129748
Alignment:
Q  199 tataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    ||||| ||||||||||  | |||||||||||| |||||||||||| |  ||||| |||||||||| || ||||||| |||| |||||    
T  25129833 tatagattatatgaaagcagtttgactttattgtatcttttggtataggaataagttatacataagca-ttgtatggtaagtgctta 25129748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 240
Target Start/End: Complemental strand, 26990730 - 26990696
Alignment:
Q  206 tatatgaaaataatttgactttattttatcttttg 240  Q
    |||||||||| ||||||||||||||||||||||||    
T  26990730 tatatgaaaagaatttgactttattttatcttttg 26990696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 280
Target Start/End: Complemental strand, 36101576 - 36101490
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    |||||||||| ||||| ||||  | ||||||||||||||||||| |  |||| ||||| ||||| ||||| ||||| | ||||||||    
T  36101576 caacttatagattatacgaaatcagtttgactttattttatcttatattacagaaatagcttattcataaccacttatttgataagc 36101490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 49586984 - 49587042
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttata 258  Q
    |||| ||||||||||| | |||||||||||||||||||||| || | ||||| ||||||    
T  49586984 atagcttatatgaaaacagtttgactttattttatcttttgttatagaaatagcttata 49587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 53457371 - 53457301
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||||| |||||||||||||||||||||| ||   || || ||||||| |||||||||  |||||||    
T  53457371 tatgaaaatagtttgactttattttatcttttgttatcgaagtagcttatacgtaaacacttaaatgataa 53457301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 2128331 - 2128384
Alignment:
Q  212 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaac 265  Q
    |||| ||||| |||||||||||||||||| || | ||||| |||||||||||||    
T  2128331 aaaacaatttaactttattttatcttttgttatagaaatagcttatacataaac 2128384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 3467450 - 3467491
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatc 235  Q
    ||||||||||  |||||||||| |||||||||||||||||||    
T  3467450 caacttatagtctatatgaaaacaatttgactttattttatc 3467491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 286
Target Start/End: Original strand, 9279439 - 9279480
Alignment:
Q  245 aaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||||||||||||||||  ||| ||||||||||||||||    
T  9279439 aaaaataacttatacataaatgcttatatgataagcgcttat 9279480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 25183053 - 25183134
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttataca-taaacacttgtatgata 277  Q
    ||||||| | |||||||||||  || ||||||||| |||||||| || |||||||  ||||||| ||||||||| |||||||    
T  25183053 cttatagctcatatgaaaatagcttaactttatttaatcttttgttataaaaatagtttatacattaaacacttatatgata 25183134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 26599185 - 26599140
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||||||  |||||||||||  |||||||||||||||||||||||    
T  26599185 aacttataccttatatgaaaactatttgactttattttatcttttg 26599140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 28283653 - 28283730
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    |||||||||| ||||||||   ||||||||||| || | || |||||||| ||||| ||||| |||||||| ||||||    
T  28283653 tatgaaaatagtttgacttacatttatcttttgttatagaagtaacttatgcataagcacttatatgataaacgctta 28283730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 33883018 - 33882969
Alignment:
Q  212 aaaataatttgactttattttatcttttggtacaaaaataacttatacat 261  Q
    |||||||||| |||||||||||||||||| || | |||||| ||||||||    
T  33883018 aaaataatttcactttattttatcttttgttatagaaataatttatacat 33882969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 40122815 - 40122883
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||||||||| || |||||||| | |||||||||||||||||||||| ||   ||||| |||||||||||    
T  40122815 caacttatagctt-tatgaaaacagtttgactttattttatcttttgttattgaaatagcttatacataa 40122883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 41159091 - 41159030
Alignment:
Q  220 ttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcg 281  Q
    ||||||||||||||||||| | || |  |||||||||||||||| ||||| || ||||||||    
T  41159091 ttgactttattttatctttagttataggaataacttatacataagcacttatacgataagcg 41159030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 49546575 - 49546624
Alignment:
Q  220 ttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||||||||||||||||| || ||||||| |||| |||||| |||||    
T  49546575 ttgactttattttatcttttgttataaaaatatcttacacataagcactt 49546624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 49739544 - 49739483
Alignment:
Q  225 tttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||||||||| |  ||||||| ||||||||| | ||||| ||||| ||||||||||    
T  49739544 tttattttatcttttgatgtaaaaatagcttatacatcaccacttatatgaaaagcgcttat 49739483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 269
Target Start/End: Original strand, 52413197 - 52413258
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||||| ||| | |||||| ||||||||| || ||||||| ||||||||||| |||||    
T  52413197 tatgaaaatagtttcattttattctatcttttgttataaaaatagcttatacataagcactt 52413258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 905043 - 905115
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 277  Q
    ||||||| ||| || ||||||||||||||||||||| || | ||||| ||||||| ||| | ||| |||||||    
T  905043 ttatatgcaaacaaattgactttattttatcttttgttatagaaatagcttatacttaagcgcttatatgata 905115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 274
Target Start/End: Original strand, 8007761 - 8007837
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatg 274  Q
    |||||| |||||||| || | |||||||||| ||||||||||| || | ||| | ||||||||||| | ||||||||    
T  8007761 ttatagcttatatgataacagtttgactttactttatcttttgttatagaaacagcttatacataagcccttgtatg 8007837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 10357430 - 10357378
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 257  Q
    ||||||||||| ||||| || ||||||||||||||| || | |||||||||||    
T  10357430 ttatatgaaaaaaatttaacattattttatcttttgttatagaaataacttat 10357378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 15304420 - 15304472
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 257  Q
    ||||||||||| ||||| |||||||||||||||||| || | ||||| |||||    
T  15304420 ttatatgaaaacaatttaactttattttatcttttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 23315631 - 23315591
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatctt 237  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  23315631 cttatagcctatatgaaaacaatttgactttattttatctt 23315591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 25964419 - 25964359
Alignment:
Q  225 tttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    |||||||||||||||| || ||||||| |||||||| ||  |||| |||||||||| ||||    
T  25964419 tttattttatcttttgttataaaaatagcttatacaaaagaacttatatgataagcactta 25964359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 28842971 - 28843011
Alignment:
Q  246 aaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||| ||||||||||| ||||| ||||||||||||||||    
T  28842971 aaaatagcttatacataagcacttatatgataagcgcttat 28843011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 42039140 - 42039092
Alignment:
Q  221 tgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||||||||| ||||| |||| ||||| ||||||||||| |||||    
T  42039140 tgactttattttattttttgttacagaaatagcttatacataagcactt 42039092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 42809298 - 42809242
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 261  Q
    ||||||||||| ||||| ||| |||||||||||||| || | ||||| |||||||||    
T  42809298 ttatatgaaaacaatttaactatattttatcttttgttatagaaatagcttatacat 42809242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 3217263 - 3217344
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||| ||||||||||| ||||| |||||||| |||||||    
T  3217263 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttatatgataatcgcttat 3217344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 32975961 - 32975894
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||||||||| ||||| |||| ||||||||||||||||||||||| ||||| ||||||||||    
T  32975961 tttgactttattttatattttgttacagaaataacttatacataaacacttatatgagaagcgcttat 32975894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 24836262 - 24836336
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||| || | |||||||||||||||||| ||||    
T  24836262 aacttatagtttatacgaaaacaatttgactttattttatcttttgttatagaaataacttatacataaatactt 24836336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 279
Target Start/End: Original strand, 29274295 - 29274376
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    |||||| ||||||||||| |||||||||||||||||||||||| || | ||||| ||||||||||| || || |||||||||    
T  29274295 ttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagcatttctatgataag 29274376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 2027471 - 2027530
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataactta 256  Q
    ||||||||||||||||||||| |||||||||||||||||||||| || ||||||| ||||    
T  2027471 cttataggttatatgaaaatagtttgactttattttatcttttgttataaaaatagctta 2027530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 197 - 286
Target Start/End: Complemental strand, 22742371 - 22742282
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||| || | ||||| |||||| ||||  |||| || |||||||||||||    
T  22742371 cttatagcttatatgaaaacaatttgactttattttatcctttgttatacaaatagcttatagataagaacttatacgataagcgcttat 22742282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 277
Target Start/End: Original strand, 10452422 - 10452505
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 277  Q
    |||||||||| ||||||||||||| ||||| |||||||||| ||||| || | ||||| ||||||||||| ||||  |||||||    
T  10452422 caacttatagcttatatgaaaatagtttgattttattttatattttgttatagaaatagcttatacataagcactgatatgata 10452505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 28531627 - 28531694
Alignment:
Q  218 atttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    ||||||||||||||||||||||| || | ||||||||||||||  | ||||| |||||||||||||||    
T  28531627 atttgactttattttatcttttgttatataaataacttatacaagagcacttttatgataagcgctta 28531694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 27595630 - 27595674
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttattttatctttt 239  Q
    |||||| || |||||||||||||||||||||||||||||||||||    
T  27595630 aacttacagcttatatgaaaataatttgactttattttatctttt 27595674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 4006722 - 4006647
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||||| |||||| |||| ||||||||||||||||||| |||| || | ||||| ||||| ||||| |||||    
T  4006722 caacttatagcttatataaaaacaatttgactttattttatcatttgttatagaaatatcttatgcataagcactt 4006647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 285
Target Start/End: Original strand, 11340687 - 11340777
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    ||||||||||  ||||||||||||| || |||||||||||||||||| || | || || |||||| |||| ||||| |||| ||||||||||    
T  11340687 caacttatagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttatatg-taagcgctta 11340777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 286
Target Start/End: Complemental strand, 2206592 - 2206506
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||| |||||| |||| ||||  |||||||||||||||||| || |||||||||||||||| |||  ||| || |||||| ||||||    
T  2206592 atagcttatataaaaacaattatactttattttatcttttgttataaaaataacttatacagaaatgcttatacgataagagcttat 2206506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 7785808 - 7785866
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataactta 256  Q
    |||||| ||||||||||| | ||||||||||||||||||||||||| | || |||||||    
T  7785808 ttatagcttatatgaaaagagtttgactttattttatcttttggtatataagtaactta 7785866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 279
Target Start/End: Original strand, 8349737 - 8349811
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    |||||| |||| ||||| |||||||||||||||||| || | |||||  ||||||| |||||||| |||||||||    
T  8349737 ttatataaaaacaatttaactttattttatcttttgttagagaaatagtttatacacaaacacttatatgataag 8349811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 279
Target Start/End: Complemental strand, 10032576 - 10032494
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    ||||||| |||||||||| || |||| |||||||| | || ||| || ||||||| |||||||||||||| || |||||||||    
T  10032576 cttatagcttatatgaaattagtttgcctttatttcacctattgttataaaaatagcttatacataaacatttatatgataag 10032494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 280
Target Start/End: Complemental strand, 2514709 - 2514624
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    ||||||||| | |||| ||| || |||||||||||||||||||||  || | ||||| ||||||||||| |||||  |||||||||    
T  2514709 aacttatagctcatataaaattagtttgactttattttatcttttattatagaaatagcttatacataagcacttacatgataagc 2514624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 286
Target Start/End: Complemental strand, 3155181 - 3155092
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||||||||||| ||| | ||||||||| ||||||||||||  | | | ||| ||||||||||| || || |||||||| |||||||    
T  3155181 cttataggttatatggaaacagtttgactttgttttatcttttgtaaaagagatagcttatacataaccatttatatgataaacgcttat 3155092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 286
Target Start/End: Complemental strand, 4248943 - 4248874
Alignment:
Q  217 aatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||||||||||||||||| ||   ||||| |||||| |||| ||||| ||||| ||||||||||    
T  4248943 aatttgactttattttatcttttgttattgaaatagcttatatataagcacttatatgacaagcgcttat 4248874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 5328971 - 5328898
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||| |||||  |||||||||||||||||||||| || | |||||||||| || ||| ||||| ||||||||    
T  5328971 ttatataaaaatggtttgactttattttatcttttgttatagaaataacttaaacgtaagcacttttatgataa 5328898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 10400274 - 10400186
Alignment:
Q  197 cttataggttatatgaaaataatttgactttatttt-atcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    ||||||| |||||||| || |||||||||||||||| |||||||  || |||| || |||||||||||||| || |||||||||| ||||    
T  10400274 cttatagcttatatgataacaatttgactttatttttatcttttattataaaa-tagcttatacataaacatttatatgataagccctta 10400186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 10749301 - 10749381
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||||||||||||| |||||||||||||||||  || | |||| ||||||||||||   ||| |||||||| |||||||    
T  10749301 ttatatgaaaataatttaactttattttatcttttattatagaaat-acttatacataacatcttatatgataaacgcttat 10749381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 31672544 - 31672621
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    |||||||| | |||||||||||||||| |||||  |   |||||  ||||||||||||||||||||||||| ||||||    
T  31672544 tatgaaaacagtttgactttattttattttttgtcatggaaatagtttatacataaacacttgtatgataatcgctta 31672621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 33068634 - 33068715
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||| |||||| | |||||  ||||||||||||||| || | ||||||||||||||||| || || | ||||||||||||||    
T  33068634 ttatttgaaaacagtttgatattattttatcttttgttatagaaataacttatacataagcatttatttgataagcgcttat 33068715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 5554861 - 5554917
Alignment:
Q  228 attttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctt 284  Q
    ||||||||||||| || | ||||||||||||||||||||| | ||||||| ||||||    
T  5554861 attttatcttttgttatagaaataacttatacataaacacgtatatgatatgcgctt 5554917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 7714022 - 7713950
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 277  Q
    ||||||||||| |||||||||||||||||||||||| ||  ||| ||  |||||||||| | ||| |||||||    
T  7714022 ttatatgaaaacaatttgactttattttatcttttgttatgaaagtagtttatacataagctcttatatgata 7713950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 20671938 - 20672002
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||| ||||| |||||||||||||||||||||||| |  | ||||| ||||||||||| |||||    
T  20671938 ttatacgaaaacaatttgactttattttatcttttgatctagaaatagcttatacataatcactt 20672002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 278
Target Start/End: Complemental strand, 21959732 - 21959652
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||| ||||||| ||| || ||||||||||||||||||||| ||   ||||| ||||||| ||| ||||| ||||||||    
T  21959732 ttatagcttatatgcaaacaaattgactttattttatcttttgttatggaaatagcttatacttaagcacttctatgataa 21959652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 27693512 - 27693544
Alignment:
Q  205 ttatatgaaaataatttgactttattttatctt 237  Q
    |||||||||||||||||||||||||||||||||    
T  27693512 ttatatgaaaataatttgactttattttatctt 27693544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 281913 - 281956
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||||| ||||||||||| || |||||||||||||||||||||    
T  281913 cttatagcttatatgaaaacaagttgactttattttatcttttg 281956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 280
Target Start/End: Complemental strand, 7354201 - 7354126
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    ||||||||||||| || || |||||||||||||||| || | |||||  |||||||| || |||||||||| ||||    
T  7354201 ttatatgaaaatagttcgattttattttatcttttgttatagaaatagtttatacatgaaaacttgtatgaaaagc 7354126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 240
Target Start/End: Complemental strand, 27713504 - 27713469
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||||||||| ||||||||||||||||||||||||    
T  27713504 ttatatgaaaagaatttgactttattttatcttttg 27713469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 258
Target Start/End: Complemental strand, 27857358 - 27857319
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttata 258  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  27857358 tttgactttattttatcttttgttacaaaagtaacttata 27857319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 32513821 - 32513759
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacact 268  Q
    ||||||| ||||| |||||||||||||||| ||||| || | ||||||||||| ||||||||||    
T  32513821 ttatatggaaatagtttgactttattttat-ttttgttatagaaataacttatgcataaacact 32513759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 240
Target Start/End: Complemental strand, 1403000 - 1402958
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||||| ||||||||||||| ||| ||||||||||||||||||    
T  1403000 ttatagcttatatgaaaatagtttaactttattttatcttttg 1402958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 2117411 - 2117365
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||||||||| ||||||||||||| ||||||||| ||||||| ||||    
T  2117411 caacttatagattatatgaaaatagtttgactttgttttatcctttg 2117365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 286
Target Start/End: Original strand, 6078365 - 6078443
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||| ||||||||||||||||| ||| ||  | | ||||| || |||| ||| ||| ||||||||||||||||||    
T  6078365 tatgaaaacaatttgactttattttaccttctgtgatagaaatagctcatacgtaaccacatgtatgataagcgcttat 6078443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 9093621 - 9093687
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    ||||||| ||||| ||||| ||||| |||||||||||||||||| || | ||||| ||||| |||||    
T  9093621 cttatagcttatacgaaaacaatttaactttattttatcttttgatatagaaatagcttatccataa 9093687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 24476599 - 24476541
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    ||||||||||||||||| |||  ||||||||||||| || | ||||| |||||||||||    
T  24476599 ttatatgaaaataatttaactacattttatcttttgctatagaaatagcttatacataa 24476541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 28660160 - 28660234
Alignment:
Q  206 tatatgaaaataatttgacttt-attttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    ||||| |||| ||||||||||| ||||||||||||   | |||||||| ||||| |||||||||| |||||||||    
T  28660160 tatatcaaaacaatttgacttttattttatcttttatcataaaaataatttatatataaacacttatatgataag 28660234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 28660833 - 28660879
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaata 251  Q
    ||||||||||||||||| |||||||||||||| ||| || |||||||    
T  28660833 ttatatgaaaataatttaactttattttatctattgttataaaaata 28660879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 34429752 - 34429826
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacact 268  Q
    |||||||||| ||||| ||||| | || ||||||||||||||| ||  || | ||||||||||||||||| ||||    
T  34429752 caacttatagtttataagaaaacagttagactttattttatctcttattatagaaataacttatacataatcact 34429826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 279
Target Start/End: Complemental strand, 1497976 - 1497903
Alignment:
Q  207 atatgaaaataatttgactttattttatcttttgg-tacaaaaataacttatacataaacacttgtatgataag 279  Q
    ||||||||| | ||||||||||||||| ||||||| || ||||||| |||| |||||| |||||  ||||||||    
T  1497976 atatgaaaacagtttgactttattttaccttttggttaaaaaaatagcttaaacataagcacttaaatgataag 1497903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 234
Target Start/End: Original strand, 2732312 - 2732341
Alignment:
Q  205 ttatatgaaaataatttgactttattttat 234  Q
    ||||||||||||||||||||||||||||||    
T  2732312 ttatatgaaaataatttgactttattttat 2732341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 4325381 - 4325454
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||||||||||| |||| || ||||||||| |||  || | |||||||||| |||||| ||||| ||||||||    
T  4325381 ttatatgaaaatagtttgtctctattttatcatttattatagaaataacttagacataagcacttatatgataa 4325454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 8420284 - 8420345
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    ||||||||||||||||| |||  || | ||||||||| ||||||| ||||| ||||||||||    
T  8420284 tttgactttattttatcatttattaaagaaataacttgtacataagcacttatatgataagc 8420345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 11363430 - 11363475
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatctttt 239  Q
    |||||||||  ||| ||||||||||||| |||||||||||||||||    
T  11363430 caacttataacttacatgaaaataatttaactttattttatctttt 11363475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 2027891 - 2027931
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatac 259  Q
    |||||||||||||||||||||  |||||||||| |||||||    
T  2027891 tttgactttattttatcttttaatacaaaaatagcttatac 2027931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 2034512 - 2034579
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtat 273  Q
    |||||||||| || ||||||||||||||||| |||| |  ||||| | ||||||||||| |||||||||    
T  2034512 ttatatgaaagtagtttgactttattttatc-tttgttgtaaaaacagcttatacataagcacttgtat 2034579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 9559620 - 9559672
Alignment:
Q  211 gaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    ||||| ||||| | |||||||||||||||| || | |||||||||||||||||    
T  9559620 gaaaacaatttaaatttattttatcttttgctatagaaataacttatacataa 9559672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 273
Target Start/End: Complemental strand, 29940789 - 29940725
Alignment:
Q  209 atgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtat 273  Q
    ||||||| || ||||||||||||||||||||| || | ||| | ||||||| ||| |||||||||    
T  29940789 atgaaaacaaattgactttattttatcttttgttatagaaaaagcttatacttaagcacttgtat 29940725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 33116578 - 33116538
Alignment:
Q  229 ttttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||||||| || | |||||||||||||||||||||||    
T  33116578 ttttatcttttgttaaagaaataacttatacataaacactt 33116538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 286
Target Start/End: Complemental strand, 27584 - 27492
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| || || | ||||||||||||||||| |||||  |||||||| ||||||    
T  27584 caacttatagtttatatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcacttacatgataagagcttat 27492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 21351 - 21409
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    ||||| ||||| ||||| |||||||||||||||||  || ||||||| |||||||||||    
T  21351 ttatacgaaaacaatttaactttattttatcttttcctataaaaatagcttatacataa 21409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 286
Target Start/End: Complemental strand, 4200232 - 4200145
Alignment:
Q  199 tataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||| ||||||||||| || ||||||||||||||||||||| || |||||||||||||| ||||||||||  |||||||| ||||||    
T  4200232 tatagcttatatgaaaacaacttgactttattttatcttttgttataaaaataacttatatataaacacttagatgataagtgcttat 4200145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 15360902 - 15360826
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttg 270  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||| || | |||||||| |||||||||||||||    
T  15360902 caacttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaataactaatacataaacacttg 15360826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 196 - 285
Target Start/End: Original strand, 45990122 - 45990211
Alignment:
Q  196 acttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    |||||||| ||||||||||| ||||| |||||||||||||||||| || ||||||| | ||||||| | || ||||||||||||| ||||    
T  45990122 acttatagcttatatgaaaacaattttactttattttatcttttgatataaaaatagcatatacattagcatttgtatgataagctctta 45990211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 205 - 285
Target Start/End: Complemental strand, 871042 - 870962
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    ||||||||||| || ||||||| ||||||||||||| || |||||||  |||||||||| ||||| |||||||||||||||    
T  871042 ttatatgaaaaaaaattgacttaattttatcttttgttataaaaatagtttatacataagcacttatatgataagcgctta 870962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 279
Target Start/End: Original strand, 28467369 - 28467456
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttg--gtacaaaaataacttatacataaacacttgtatgataag 279  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||   |||| |||||  |||||||||| ||| |||||||||||    
T  28467369 caacttgtagcttatatgaaaataatttgactttattttatcttttgttatacacaaataggttatacataatcacctgtatgataag 28467456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 286
Target Start/End: Original strand, 7274015 - 7274093
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||| ||||||||||||||| |||||||| || ||||||||| ||||||||| || || |||||||||| |||||    
T  7274015 tatgaaaacaatttgactttatttcatcttttgttataaaaataacatatacataagcatttatatgataagcacttat 7274093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 286
Target Start/End: Complemental strand, 49517075 - 49516985
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaac-acttgtatgataagcgcttat 286  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||| || | |||||||||||||| |||| | || |||||||| |||||||    
T  49517075 cttatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaataacttatacacaaacaatttatatgataaacgcttat 49516985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 44032065 - 44032145
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||| ||||||||||| ||||||||||||||||| |||||| || | |||   ||||||||||||||||| ||||||||    
T  44032065 ttatagcttatatgaaaacaatttgactttattttagcttttgttatagaaacggcttatacataaacacttatatgataa 44032145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 48830142 - 48830210
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaaca 266  Q
    |||||| ||||||||||||| |||||||||||||||||||| |  | | ||||||||||||||||||||    
T  48830142 ttatagcttatatgaaaatagtttgactttattttatctttggtaatagaaataacttatacataaaca 48830210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 289225 - 289168
Alignment:
Q  217 aatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatg 274  Q
    |||||||||||||||||||||||| |||||||||| ||||||| ||| ||||| ||||    
T  289225 aatttgactttattttatcttttgctacaaaaatagcttatacttaagcacttatatg 289168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 275
Target Start/End: Complemental strand, 17269258 - 17269177
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatga 275  Q
    |||||||| | ||||||||||| ||||||||||||||||  |||||| |  | ||||||||||||||||| ||||| |||||    
T  17269258 caacttattgcttatatgaaaacaatttgactttattttcacttttgttctagaaataacttatacataagcacttatatga 17269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 29007778 - 29007847
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||||||||| ||||||||||||| |||||||||| ||| ||||||| || | |||||||||| ||||||    
T  29007778 caacttatagcttatatgaaaatagtttgactttaatttttcttttgttatagaaataacttagacataa 29007847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 286
Target Start/End: Original strand, 43372025 - 43372113
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||| |||| |||||||||||||||| |||||||||| ||| || | ||||| | ||||||||| |  || ||||||||||||||||    
T  43372025 ttatagcttatgtgaaaataatttgactctattttatctattgttatagaaatagcctatacataagccattatatgataagcgcttat 43372113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 286
Target Start/End: Original strand, 16982027 - 16982090
Alignment:
Q  223 actttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||||||||||| ||   |||||| |||||||||||||||| |||||||||| |||||    
T  16982027 actttattttatcttttgttatcgaaataagttatacataaacacttatatgataagctcttat 16982090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 267
Target Start/End: Original strand, 29793991 - 29794057
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacac 267  Q
    |||| |||| |||||| |||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  29793991 atagcttatttgaaaacaatttgactt-attttatcttttgttacaaaaatagcctatacataaacac 29794057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 286
Target Start/End: Complemental strand, 50998555 - 50998468
Alignment:
Q  199 tataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||| |||||||||| || ||||| ||| |||||||||||| |||| ||||| ||||||||||| | | | |||||||| |||||||    
T  50998555 tatagcttatatgaaagtagtttgattttgttttatcttttgttacagaaatagcttatacataagcgcctatatgataaacgcttat 50998468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 240
Target Start/End: Original strand, 27738246 - 27738288
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  27738246 ttatagcttatatgaaaacaatttgactttattttatcttttg 27738288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 30371156 - 30371110
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  30371156 caacttatagcttatatgaaaacaatttgagtttattttatcttttg 30371110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 278
Target Start/End: Original strand, 33339500 - 33339566
Alignment:
Q  212 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||| ||| |||| |||||||||||||||| | ||||| ||||||||||||||| | ||||||||    
T  33339500 aaaatagtttaacttcattttatcttttggtatagaaatagcttatacataaacacctatatgataa 33339566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 267
Target Start/End: Original strand, 4256108 - 4256177
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacac 267  Q
    |||||| ||||| ||||||||||| |||||||| ||||||||| |  | ||||| |||||||||||||||    
T  4256108 ttatagcttatacgaaaataatttaactttattgtatcttttgttgtagaaatagcttatacataaacac 4256177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 7218136 - 7218181
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatctttt 239  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||||    
T  7218136 caacttatagcttatatgaaaacaatttgactttattttacctttt 7218181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 44936656 - 44936713
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataactt 255  Q
    |||||| ||||||||||||| ||||||||||| |||||||||| || | |||||||||    
T  44936656 ttatagcttatatgaaaatagtttgactttatcttatcttttgttatagaaataactt 44936713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 46980202 - 46980275
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||||||||| | |||| ||||||||||||||||| || ||||| ||||||| ||||  ||||| ||||||||    
T  46980202 ttatatgaaaacagtttgtctttattttatcttttgatataaaaacaacttatgcatatgcacttatatgataa 46980275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 279
Target Start/End: Complemental strand, 49557149 - 49557064
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    |||||||||| ||| ||||| |  |||| |||||||||||||||||| || | ||||||||||||||  | ||||| |||||||||    
T  49557149 caacttatagcttaaatgaatactatttaactttattttatcttttgttatagaaataacttatacagcagcacttatatgataag 49557064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 283
Target Start/End: Complemental strand, 52286682 - 52286597
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgct 283  Q
    |||||| ||||||||||||  ||| |||||||||||||||||| |  | ||||| ||||| ||||| | ||| |||||||||||||    
T  52286682 ttatagcttatatgaaaattgtttaactttattttatcttttgttgtagaaatatcttattcataagcgcttatatgataagcgct 52286597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 1232965 - 1233029
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||| ||||||||||| |||||||||||| ||||| || ||||| | ||||| |||||||||||    
T  1232965 ttatacgaaaataatttaactttattttatgttttgttataaaaacagcttatgcataaacactt 1233029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 1730881 - 1730825
Alignment:
Q  213 aaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||| |||||||||||||||||||| | || ||||||| ||||||||||| |||||    
T  1730881 aaatagtttgactttattttatctttggttaaaaaaatagcttatacataagcactt 1730825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 10439688 - 10439648
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||| |||||||||||||||||||||| |||||||||||||    
T  10439688 atagcttatatgaaaataatttgacttcattttatcttttg 10439648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 11218175 - 11218235
Alignment:
Q  225 tttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    ||||||| ||||||||  | | ||||||||||||||||||||||| |||||||| ||||||    
T  11218175 tttatttaatcttttgacatataaataacttatacataaacacttatatgataaacgctta 11218235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 11560622 - 11560686
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||| |||| ||||||| || ||||||||||||| || ||||||| ||||||| |||||||||    
T  11560622 ttatataaaaacaatttgatttgattttatcttttgctataaaaatagcttatacctaaacactt 11560686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 14737781 - 14737829
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataactta 256  Q
    |||||||| |||||||||||||||||||||||| || | ||||||||||    
T  14737781 tatgaaaacaatttgactttattttatcttttgttatagaaataactta 14737829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 15361718 - 15361678
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatctt 237  Q
    ||||||| |||||||||||||||||||||||| ||||||||    
T  15361718 cttatagcttatatgaaaataatttgactttactttatctt 15361678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 286
Target Start/End: Complemental strand, 17420207 - 17420119
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||| ||||||||||||  || ||||||||||||||||||  || |||||||  ||||||||||  |||| | || |||||||||||    
T  17420207 ttatagcttatatgaaaattgttcgactttattttatcttttcttataaaaatagtttatacataagtacttatgtgctaagcgcttat 17420119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 286
Target Start/End: Complemental strand, 23895332 - 23895252
Alignment:
Q  206 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||| || | ||||| |||||||||||||||| || | ||||| |||||||||||  |||| ||||||||| ||||||    
T  23895332 tatatgagaacagtttgaatttattttatcttttgttatagaaatagcttatacataataacttatatgataagggcttat 23895252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 29723506 - 29723454
Alignment:
Q  185 ttgtgtaagcaacttataggttatatgaaaataatttgactttattttatctt 237  Q
    ||||| |||||||||||||  |||||||||||| ||||| |||||||||||||    
T  29723506 ttgtgaaagcaacttatagcatatatgaaaatagtttgagtttattttatctt 29723454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 36641862 - 36641814
Alignment:
Q  215 ataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||||||||||||||||||||||||| || | |||||||||||| ||||    
T  36641862 ataatttgactttattttatcttttgttatagaaataacttatatataa 36641814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 42336659 - 42336583
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcg 281  Q
    ||||||||||||   ||||||||||||||| ||||| || ||||||||| ||||||||| ||||  |||||| ||||    
T  42336659 ttatatgaaaattgcttgactttattttattttttgttataaaaataacctatacataagcactaatatgatgagcg 42336583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 4215374 - 4215311
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||| ||||||||||| | ||||||||||||||||| |||| ||  ||||||||||||| ||||    
T  4215374 atagtttatatgaaaacagtttgactttattttatcatttgctatcaaaataacttatatataa 4215311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 9656655 - 9656612
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||    
T  9656655 cttatagcttatatgaaaataatttaactttattttattttttg 9656612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 233
Target Start/End: Original strand, 25006096 - 25006135
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttatttta 233  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  25006096 caacttatagcttatatgaaaacaatttgactttatttta 25006135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 36151578 - 36151637
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaa 264  Q
    ||||| ||||| |||||||||||||||||||||||| ||   ||||| ||||||||||||    
T  36151578 ttatacgaaaacaatttgactttattttatcttttgttattgaaatagcttatacataaa 36151637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 239
Target Start/End: Complemental strand, 45234191 - 45234160
Alignment:
Q  208 tatgaaaataatttgactttattttatctttt 239  Q
    ||||||||||||||||||||||||||||||||    
T  45234191 tatgaaaataatttgactttattttatctttt 45234160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 47877127 - 47877084
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||||    
T  47877127 cttatagtttatatgaaaacaatttgattttattttatcttttg 47877084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 50319286 - 50319231
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||||||| || ||||||||||||||||||||| || | ||||| |||||||||||    
T  50319286 tatgaaaacaacttgactttattttatcttttgttatagaaatagcttatacataa 50319231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 5421982 - 5422028
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||||||||| ||||| ||||| ||||||||| ||||||||||||||    
T  5421982 caacttatagcttataagaaaacaatttgactatattttatcttttg 5422028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 4202217 - 4202282
Alignment:
Q  220 ttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    ||||||||  ||||||||||| || | ||||||||||||| ||| ||||| |||||||| ||||||    
T  4202217 ttgactttggtttatcttttgttatagaaataacttatacttaagcacttatatgataaacgctta 4202282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 4304354 - 4304277
Alignment:
Q  209 atgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||| | |||||||| |||||||| |||| | || |||  ||||||| ||||||| || ||||||||||||||||    
T  4304354 atgaaaagattttgacttaattttatcgtttgttgcagaaacgacttatatataaacagttatatgataagcgcttat 4304277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 5592747 - 5592792
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatctttt 239  Q
    |||||||||| |||||||| || |||| ||||||||||||||||||    
T  5592747 caacttatagcttatatgacaacaattcgactttattttatctttt 5592792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 261
Target Start/End: Original strand, 6933037 - 6933090
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 261  Q
    |||||||| |||||||||||||||||| ||||| || ||||||  |||||||||    
T  6933037 tatgaaaacaatttgactttattttatgttttgttataaaaatggcttatacat 6933090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 10854716 - 10854655
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    ||||||||||||||||||| |  | || ||||||||||| ||||| ||||| ||||||||||    
T  10854716 tttgactttattttatcttgtatttcagaaataacttattcataaccacttatatgataagc 10854655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 258
Target Start/End: Complemental strand, 11211115 - 11211062
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttata 258  Q
    ||||||||||| ||||| |||||||||||||||||| |  | ||||||||||||    
T  11211115 ttatatgaaaaaaatttaactttattttatcttttgttctagaaataacttata 11211062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 30815708 - 30815789
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaa-cacttgtatgataagcgctta 285  Q
    ||||||||||||| ||| |||||||||||||||||| || | ||| | |||| |||||||  | || |||||||||||||||    
T  30815708 ttatatgaaaatagtttaactttattttatcttttgttatagaaaaagcttagacataaagtaattatatgataagcgctta 30815789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 36602783 - 36602714
Alignment:
Q  209 atgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||| ||||||||||||||||||| ||| |  | | ||| ||||||||||| ||||| ||||||||    
T  36602783 atgaaaatgatttgactttattttatctattgttgtagatatagcttatacataatcacttatatgataa 36602714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 37818465 - 37818380
Alignment:
Q  201 taggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||| |||| ||||||| ||||||||  |||||||| ||| || | ||||||||||||||||| ||||| | || |||| ||||||    
T  37818465 taggatatacgaaaatagtttgacttcgttttatctcttgttatagaaataacttatacataagcacttatttggtaagtgcttat 37818380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 44940324 - 44940259
Alignment:
Q  221 tgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||||||||||||| || ||||||||  ||||||||  || || ||||||||||| ||||    
T  44940324 tgactttattttatcttttgctataaaaataagctatacatacgcaattatatgataagcgattat 44940259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 45205076 - 45205031
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatctttt 239  Q
    |||||| ||| ||||||| ||||| |||||||||||||||||||||    
T  45205076 caacttctagcttatatggaaatagtttgactttattttatctttt 45205031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 27140482 - 27140418
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||| |||| ||||| |  ||||||||||||||| || | |||||||||| ||||||||||||    
T  27140482 ttatataaaaacaatttaatattattttatcttttgttatagaaataacttacacataaacactt 27140418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 38867907 - 38867959
Alignment:
Q  206 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttata 258  Q
    |||||||||| | ||||||||||||| ||||||||||| | ||||| ||||||    
T  38867907 tatatgaaaacattttgactttatttaatcttttggtatagaaatagcttata 38867959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 40357963 - 40358039
Alignment:
Q  209 atgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    ||||||| |||||||||||||||||||  ||| || | ||||| ||||||||||  ||||| ||| |||||| ||||    
T  40357963 atgaaaacaatttgactttattttatccattgttatagaaatagcttatacatagtcacttatataataagcactta 40358039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 41516148 - 41516188
Alignment:
Q  200 ataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||| ||||||||||||| ||||||||| ||||||||||||    
T  41516148 atagcttatatgaaaatagtttgactttcttttatcttttg 41516188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 41638399 - 41638463
Alignment:
Q  221 tgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    ||||||||||||||||| || |  | |||||| |||||||||| ||||| ||||||||| |||||    
T  41638399 tgactttattttatcttgtgttctataaataaattatacataagcacttatatgataagtgctta 41638463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 45107619 - 45107548
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 277  Q
    ||||||||||||| |||||||||||||||| ||||  || | ||||| |||||| |||| ||||| |||||||    
T  45107619 ttatatgaaaatagtttgactttattttat-ttttcttatagaaatagcttatagataagcacttatatgata 45107548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 282
Target Start/End: Complemental strand, 48282125 - 48282053
Alignment:
Q  211 gaaaataatttgactttattttatcttt-tggtacaaaaataacttatacataaacacttgtatgataagcgc 282  Q
    ||||||| |||||||||||||||||||| |  || | ||||| ||| ||||||| ||||| ||||||||||||    
T  48282125 gaaaatagtttgactttattttatctttcttttatagaaatagcttttacataagcacttatatgataagcgc 48282053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 52559901 - 52559957
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 261  Q
    ||||| |||||||||||||||||||||||| ||||| || | | |||| ||||||||    
T  52559901 ttatacgaaaataatttgactttattttatattttgttatagatataatttatacat 52559957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 8680986 - 8680929
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaac 265  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  8680986 tatgaaaataatttgactttattatatcttttgttacaaaaataacttatacataaac 8680929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 280
Target Start/End: Complemental strand, 49060547 - 49060462
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||| || | ||||| |||||||||||| |||| ||||||||||    
T  49060547 aacttatagcttatataaaaataatttgactttattttattttttgttatagaaatagcttatacataaatacttatatgataagc 49060462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 286
Target Start/End: Complemental strand, 30134046 - 30133967
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||| ||||| || ||||||||||||||||||||| |  ||||||| ||||||||||||||||  ||||||||||||||||    
T  30134046 ttatacgaaaacaagttgactttattttatcttttgttgtaaaaatagcttatacataaacact--tatgataagcgcttat 30133967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 284
Target Start/End: Complemental strand, 30496712 - 30496622
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctt 284  Q
    |||| ||||||||||| ||||| |||||||||||||||||| ||||| || | |||||  |||||||||||||||| | ||||| ||||||    
T  30496712 caacctataggttatacgaaaacaatttgactttattttatattttgttatagaaatagtttatacataaacacttatgtgatatgcgctt 30496622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 45813242 - 45813311
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||||||||| ||||||||||| || |||||||||||||||||||||||| | ||||| |||||| ||||    
T  45813242 caacttatagattatatgaaaacaagttgactttattttatcttttggtatagaaatagcttataaataa 45813311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 30751513 - 30751441
Alignment:
Q  206 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||  |||| || || ||||| ||||||||    
T  30751513 tatatgaaaataatttgactttattttatattttgttacaaaaatagtttattcacaagcacttatatgataa 30751441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 1417272 - 1417201
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaac 265  Q
    |||||||| | ||||||||||| |||||||||||||||||||||||| || | |||||  ||||||||||||    
T  1417272 caacttattgcttatatgaaaacaatttgactttattttatcttttgttatataaatagtttatacataaac 1417201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 281
Target Start/End: Complemental strand, 44241867 - 44241781
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcg 281  Q
    ||||||||||||||||  |||||| ||  |||||||||||||| ||| || | |||||||||||||||| |||||| |||||||||||    
T  44241867 caacttataggttatacaaaaatagtta-actttattttatctgttgttatagaaataacttatacatacacacttatatgataagcg 44241781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 198 - 268
Target Start/End: Complemental strand, 23918961 - 23918891
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacact 268  Q
    |||||| ||||||||||| ||||||||||||||||||||||||  | | | |||||||| |||||||||||    
T  23918961 ttatagcttatatgaaaacaatttgactttattttatcttttgtaatagagataacttacacataaacact 23918891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 27121659 - 27121741
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttatt 287  Q
    ||||||||||| ||||||||||||||||||| |||  || | ||||| |||||||||||  | || |||||||||||||||||    
T  27121659 ttatatgaaaacaatttgactttattttatcatttattatagaaatatcttatacataaggaattatatgataagcgcttatt 27121741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 205 - 283
Target Start/End: Complemental strand, 35536104 - 35536026
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgct 283  Q
    ||||||||||| ||||||||||||||||||||| || || | ||||| ||||||||||| |  || |||||||||||||    
T  35536104 ttatatgaaaacaatttgactttattttatcttatgttatagaaatagcttatacataagcctttatatgataagcgct 35536026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 39505940 - 39505890
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||| ||||| |||||||| ||||||||||||||||||||||||||||    
T  39505940 tttgactctatttaatcttttgctacaaaaataacttatacataaacactt 39505890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 279
Target Start/End: Original strand, 9527152 - 9527237
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    |||||||||| ||||||||||| | |||||||||||| ||||||||| || | | ||| | |||| |||| |||||||||||||||    
T  9527152 caacttatagtttatatgaaaacagtttgactttattatatcttttgttatagatatagcgtatatataagcacttgtatgataag 9527237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 39591540 - 39591593
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttata 258  Q
    ||||||||||| |||||||||||||||||||||||| || | ||||||||||||    
T  39591540 ttatatgaaaacaatttgactttattttatcttttgttatagaaataacttata 39591593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 45593792 - 45593865
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||||||||| | |||||||||||||||| ||||| |||| ||||| ||||||||||| || || ||||||||    
T  45593792 ttatatgaaaacagtttgactttattttatgttttgttacagaaatagcttatacataagcatttatatgataa 45593865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 5010530 - 5010614
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||||  |||||| |||||||||| |||||||||||| ||||| |||| |||||||||  ||||||   ||||||||||||    
T  5010530 caacttataccttatataaaaataatttcactttattttatattttgttacataaataacttgcacataacttcttgtatgataa 5010614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 7453462 - 7453549
Alignment:
Q  197 cttataggttatatgaaaataa-tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgct 283  Q
    ||||||| ||||||||||| || |||||||||||||||||||||| || | ||| | ||||||||| ||| ||| |||||||| ||||    
T  7453462 cttatagcttatatgaaaacaaatttgactttattttatcttttgctatagaaaaatcttatacatgaacccttttatgataaacgct 7453549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 28165095 - 28165024
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||| |||||| |||| |||||||||| ||||||||||||| || | ||| ||||||||||||| |||||    
T  28165095 ttatagcttatattaaaacaatttgacttcattttatcttttgttatagaaagaacttatacataagcactt 28165024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 31002766 - 31002723
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||    
T  31002766 cttatagcttatatgaaaatattttgactttattttatcttttg 31002723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 31341177 - 31341110
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    |||||||||||||||||||||| || | ||||| ||||||||||| || ||  |||||||||||||||    
T  31341177 tttgactttattttatcttttgttatacaaatagcttatacataagcatttagatgataagcgcttat 31341110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 40689051 - 40689094
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||    
T  40689051 cttatagcttatatgaaaataatttaactttattttatcttttg 40689094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 5939067 - 5939017
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||||||||| || ||||| || |||||||||||||||||||||||||    
T  5939067 tttgactttatttaattttttgttataaaaataacttatacataaacactt 5939017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 7244696 - 7244626
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||||||| | ||||||||| |||||||||||| || | ||||| ||||||||||| ||||| ||||||||    
T  7244696 tatgaaaacagtttgactttcttttatcttttgatatagaaatagcttatacataagcacttatatgataa 7244626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 992067 - 991994
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||||||||||| |||| ||||||||||| ||||| || | ||| ||||||||| ||| ||||| ||||||||    
T  992067 ttatatgaaaatattttgtctttattttattttttgttatagaaacaacttatacgtaagcacttatatgataa 991994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 3501028 - 3501097
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||  || | || || |||||||||||    
T  3501028 caacttatattttatatgaaaatgatttgactttattttatcttttattatataattagcttatacataa 3501097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 5373233 - 5373136
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttattttta 291  Q
    |||||||||  |||||| |||||  || ||||||||||||||||||| || | ||||| | ||||||||| |||||  ||||||||| |||| |||||    
T  5373233 caacttataacttatataaaaatgtttggactttattttatcttttgttatagaaatagcatatacataagcacttacatgataagcacttaatttta 5373136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 22759183 - 22759110
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||||||||| |||||  ||||||||||||||||| || | ||||| |||| |||||||| ||| ||||||||    
T  22759183 ttatatgaaaacaattttcctttattttatcttttgttatacaaatagcttaaacataaacgcttatatgataa 22759110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 280
Target Start/End: Complemental strand, 25511634 - 25511549
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    ||||||||  |||||| |||| || |||||||||||| |||||||| || | |||||| |||||||  ||||||| ||||||||||    
T  25511634 aacttatatcttatataaaaaaaaattgactttatttcatcttttgttatagaaataatttatacaacaacacttatatgataagc 25511549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 278
Target Start/End: Complemental strand, 47004092 - 47004011
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||||| | |||| |||||| |||||||||||||||||| ||| || | ||||| |||| | |||||||||| ||||||||    
T  47004092 cttatagttcatataaaaatagtttgactttattttatctattgttatagaaatagcttacatataaacacttatatgataa 47004011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 1431394 - 1431462
Alignment:
Q  218 atttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgcttat 286  Q
    ||||||||||||||||| |||   ||   ||||||||||||||||||||||| |||||||||| |||||    
T  1431394 atttgactttattttatttttcattatggaaataacttatacataaacacttatatgataagcacttat 1431462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 1432032 - 1432098
Alignment:
Q  200 ataggttatatgaaaataatttgacttt---attttatcttttggtacaaaaataacttatacataa 263  Q
    |||| ||||||||||||||||| |||||   ||||||||||||| || | |||||||||||||||||    
T  1432032 atagcttatatgaaaataatttaacttttttattttatcttttgttatagaaataacttatacataa 1432098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 279
Target Start/End: Complemental strand, 2223143 - 2223071
Alignment:
Q  207 atatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    |||| |||| |||||||||||  ||||||||||| || | ||||| ||||||||||||||||| || ||||||    
T  2223143 atataaaaacaatttgacttttctttatcttttgttatagaaatagcttatacataaacacttatacgataag 2223071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 30456514 - 30456558
Alignment:
Q  196 acttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||    
T  30456514 acttataacttatatgaaaacaatttgactttattttatcttttg 30456558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 41875908 - 41875864
Alignment:
Q  213 aaataatttgactttattttatcttttggtacaaaaataacttat 257  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||    
T  41875908 aaataatttgaccttattttatcttttagtacagaaataacttat 41875864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 48157173 - 48157253
Alignment:
Q  185 ttgtgtaagcaacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaac 265  Q
    ||||| || ||| |||||| |||||| |||| ||||| |||||||||||||||||  || | |||||| ||||||||||||    
T  48157173 ttgtgaaaacaaattatagcttatattaaaacaatttcactttattttatcttttattatagaaataagttatacataaac 48157253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 12835002 - 12835045
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||    
T  12835002 cttatagctaatatgaaaacaatttgactttattttatcttttg 12835045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 22296294 - 22296333
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatctt 237  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  22296294 ttataggttataggaaaataatttaactttattttatctt 22296333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 24895373 - 24895330
Alignment:
Q  185 ttgtgtaagcaacttataggttatatgaaaataatttgacttta 228  Q
    ||||| || |||||||||| ||||||||||||||||||||||||    
T  24895373 ttgtgaaaacaacttatagcttatatgaaaataatttgacttta 24895330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 195 - 278
Target Start/End: Original strand, 27481357 - 27481440
Alignment:
Q  195 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||||||| ||||||| ||| | ||||||||  ||||||| |||| || | ||||| ||||||||||||||||| ||| ||||    
T  27481357 aacttatagcttatatggaaacagtttgacttcgttttatcctttgttatagaaatagcttatacataaacacttatataataa 27481440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 5272893 - 5272959
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgt 271  Q
    ||||||||||| ||| |||||| ||||||||||||| || | |||||  ||||||||||||| ||||    
T  5272893 ttatatgaaaacaatgtgacttaattttatcttttgttatataaatagtttatacataaacagttgt 5272959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 5276207 - 5276157
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||||||| |||||||||| || ||||||| ||||||||||| |||||    
T  5276207 tttgactttatgttatcttttgttataaaaatagcttatacataagcactt 5276157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 228
Target Start/End: Complemental strand, 24909672 - 24909638
Alignment:
Q  194 caacttataggttatatgaaaataatttgacttta 228  Q
    |||||||||| ||||||||||||||||||||||||    
T  24909672 caacttatagcttatatgaaaataatttgacttta 24909638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 276
Target Start/End: Complemental strand, 24973940 - 24973870
Alignment:
Q  206 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgat 276  Q
    |||||| ||| ||||||| |||||||||||||||| || | ||||| ||| ||||||| ||||| ||||||    
T  24973940 tatatggaaacaatttgaatttattttatcttttgttatagaaatagcttttacataagcacttatatgat 24973870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 31149640 - 31149586
Alignment:
Q  210 tgaaaataatttgactttattttatcttttggtacaaaaataa-cttatacataa 263  Q
    |||||||||||| |||||||||||||||||| || || ||||| |||||||||||    
T  31149640 tgaaaataattttactttattttatcttttgttataataataagcttatacataa 31149586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 31167932 - 31167878
Alignment:
Q  210 tgaaaataatttgactttattttatcttttggtacaaaaataa-cttatacataa 263  Q
    |||||||||||| |||||||||||||||||| || || ||||| |||||||||||    
T  31167932 tgaaaataattttactttattttatcttttgttataataataagcttatacataa 31167878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 35808991 - 35809041
Alignment:
Q  219 tttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||| |||||||||||||| || | ||||| |||||||||||||||||    
T  35808991 tttgactatattttatcttttgttatagaaatagcttatacataaacactt 35809041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 36532343 - 36532289
Alignment:
Q  210 tgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaa 264  Q
    |||||||||||||||||| |||||||||||| || |   ||||||||||||||||    
T  36532343 tgaaaataatttgactttgttttatcttttgttatagggataacttatacataaa 36532289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 38496583 - 38496659
Alignment:
Q  199 tataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 277  Q
    ||||||||||||||||| | ||||| |||||||||| ||||| || |||| |||||||||  ||| |||||||||||||    
T  38496583 tataggttatatgaaaacagtttga-tttattttatgttttgttataaaa-taacttatatgtaagcacttgtatgata 38496659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 45777233 - 45777279
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttg 240  Q
    |||||||||| ||||||||||| | |||||||| |||||||||||||    
T  45777233 caacttatagtttatatgaaaacagtttgacttaattttatcttttg 45777279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 239
Target Start/End: Complemental strand, 46825095 - 46825061
Alignment:
Q  205 ttatatgaaaataatttgactttattttatctttt 239  Q
    ||||||||||| |||||||||||||||||||||||    
T  46825095 ttatatgaaaacaatttgactttattttatctttt 46825061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 240
Target Start/End: Complemental strand, 3635956 - 3635927
Alignment:
Q  211 gaaaataatttgactttattttatcttttg 240  Q
    ||||||||||||||||||||||||||||||    
T  3635956 gaaaataatttgactttattttatcttttg 3635927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 5006582 - 5006639
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 262  Q
    ||||||||||| | |||||||||||||||||||||| || |  |||| ||||||||||    
T  5006582 ttatatgaaaacagtttgactttattttatcttttgttataggaatagcttatacata 5006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 7623135 - 7623078
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 262  Q
    |||||| |||| | || |||||||||||| |||||| || ||||||||||||||||||    
T  7623135 ttatataaaaagagttggactttattttaccttttgttataaaaataacttatacata 7623078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 8445275 - 8445210
Alignment:
Q  213 aaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||| ||||| ||||||||||||||||| || ||||||| |||||| | || ||||| ||||||||    
T  8445275 aaatcatttgtctttattttatcttttgttataaaaatagcttataaacaagcacttatatgataa 8445210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 278
Target Start/End: Complemental strand, 27548268 - 27548187
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    ||||||| ||| ||||||| |||| ||||||||||||||||||| ||   ||||| |||||| |||| ||||| || |||||    
T  27548268 cttatagcttaaatgaaaacaattagactttattttatcttttgctaaggaaatagcttatagataagcacttataagataa 27548187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 27626197 - 27626258
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaaca 266  Q
    |||||| | |||| ||||||||||||||| |||||| || | ||||| ||||||||||||||    
T  27626197 ttatataataatagtttgactttattttagcttttgatatagaaatagcttatacataaaca 27626258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 28178963 - 28178910
Alignment:
Q  208 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 261  Q
    |||||||| ||| |||||||||||||||||||| || | ||||| |||||||||    
T  28178963 tatgaaaacaatatgactttattttatcttttgttatagaaatagcttatacat 28178910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 28613596 - 28613665
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 263  Q
    |||||||||  |||||  |||| ||||| ||||| |||||||||||| || ||||||| |||||||||||    
T  28613596 caacttataacttatacaaaaacaatttaactttgttttatcttttgttataaaaatagcttatacataa 28613665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 29574689 - 29574754
Alignment:
Q  220 ttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    |||||||||||| ||||||||  | ||||||| ||||||||||| || || |||||||| ||||||    
T  29574689 ttgactttatttcatcttttgtcataaaaatagcttatacataagcatttatatgataaacgctta 29574754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 279
Target Start/End: Original strand, 39551614 - 39551695
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 279  Q
    |||||| ||||||||||| | ||| |||||| | ||||||||| || | ||||| ||||||| |||| |||| |||||||||    
T  39551614 ttatagcttatatgaaaacagttttactttagtatatcttttgttatagaaatagcttatacttaaatacttatatgataag 39551695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 40428559 - 40428518
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatctttt 239  Q
    |||||| ||||||||||||||||| |||||||||||| ||||    
T  40428559 ttatagcttatatgaaaataatttaactttattttatttttt 40428518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 1373614 - 1373670
Alignment:
Q  206 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 262  Q
    |||||||||| | |||||||||| |||||||||||  | ||||||||||| ||||||    
T  1373614 tatatgaaaaaagtttgactttaatttatcttttgtcataaaaataacttttacata 1373670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 5269519 - 5269463
Alignment:
Q  213 aaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||||||||||||||||||||||  || | |||||| ||||| |||| |||||    
T  5269519 aaataatttgactttattttatcttttattaaagaaataatttatatataagcactt 5269463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 14823938 - 14823982
Alignment:
Q  225 tttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||||||||||| |||| ||||||||||||| ||| |||||    
T  14823938 tttattttatcttttgttacataaataacttatacctaagcactt 14823982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 15270945 - 15270989
Alignment:
Q  225 tttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    |||||||||||||||| |||| ||||||||||||| ||| |||||    
T  15270945 tttattttatcttttgttacataaataacttatacctaagcactt 15270989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 20476595 - 20476651
Alignment:
Q  217 aatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtat 273  Q
    ||||||| ||||||||||||||||  | | ||||||||||| |||| ||||||||||    
T  20476595 aatttgaatttattttatcttttgcaatagaaataacttatgcatacacacttgtat 20476651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 25507320 - 25507284
Alignment:
Q  233 atcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||||||| | |||||||||||||||||||||||    
T  25507320 atcttttggtatagaaataacttatacataaacactt 25507284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 269
Target Start/End: Original strand, 25558290 - 25558326
Alignment:
Q  233 atcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||||||| | |||||||||||||||||||||||    
T  25558290 atcttttggtatagaaataacttatacataaacactt 25558326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 269
Target Start/End: Original strand, 25558488 - 25558524
Alignment:
Q  233 atcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||||||| | |||||||||||||||||||||||    
T  25558488 atcttttggtatagaaataacttatacataaacactt 25558524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 33894619 - 33894556
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 269  Q
    ||||||||||| | |||||||| ||||||||||||| || | ||||| ||||||||||| |||||    
T  33894619 ttatatgaaaacagtttgactt-attttatcttttgttatagaaatagcttatacataagcactt 33894556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 38010719 - 38010659
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 257  Q
    ||||||| ||||||||||| |||||| |||| |||||||||||| |  |||||||| ||||    
T  38010719 cttatagcttatatgaaaacaatttggctttgttttatcttttgttttaaaaataatttat 38010659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 39908059 - 39908099
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttatctt 237  Q
    ||||||| |||||||| ||| ||||||||||||||||||||    
T  39908059 cttatagcttatatgataattatttgactttattttatctt 39908099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 1147 - 1219
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 277  Q
    |||||||| |||| |||||||||||||||||||||| || | ||||| ||||||||||| ||||| |||||||    
T  1147 ttatatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgata 1219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 2828 - 2756
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 277  Q
    |||||||| |||| |||||||||||||||||||||| || | ||||| ||||||||||| ||||| |||||||    
T  2828 ttatatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgata 2756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 51572 - 51508
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 262  Q
    |||||| | ||||||||| ||||| |||||||||||| ||||| || ||||||||||||||||||    
T  51572 ttatagttgatatgaaaacaatttaactttattttatattttgttataaaaataacttatacata 51508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 285
Target Start/End: Original strand, 1786 - 1876
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    ||||||||||  ||||||||||||| || |||||||||||||||||| || | || || |||||| |||| ||||| |||| ||||||||||    
T  1786 caacttatagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttatatg-taagcgctta 1876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 285
Target Start/End: Original strand, 3876 - 3966
Alignment:
Q  194 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagcgctta 285  Q
    ||||||||||  ||||||||||||| || |||||||||||||||||| || | || || |||||| |||| ||||| |||| ||||||||||    
T  3876 caacttatagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttatatg-taagcgctta 3966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 69016 - 69054
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggta 243  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  69016 ttatatgaaaataatttgactttattttatattttggta 69054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 34063 - 34104
Alignment:
Q  198 ttataggttatatgaaaataatttgactttattttatctttt 239  Q
    |||||| | |||||||||||||||||||||||||||||||||    
T  34063 ttatagttcatatgaaaataatttgactttattttatctttt 34104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 280
Target Start/End: Original strand, 9848 - 9923
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagc 280  Q
    |||||||||||   |||||||| ||||||| ||||| || | ||||||||||||||||| ||| | ||||||||||    
T  9848 ttatatgaaaactttttgacttaattttattttttgttatagaaataacttatacataagcacctatatgataagc 9923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 240
Target Start/End: Original strand, 18440 - 18475
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttg 240  Q
    ||||||||||| ||||||||||||||||||||||||    
T  18440 ttatatgaaaagaatttgactttattttatcttttg 18475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 240
Target Start/End: Original strand, 10129 - 10158
Alignment:
Q  211 gaaaataatttgactttattttatcttttg 240  Q
    ||||||||||||||||||||||||||||||    
T  10129 gaaaataatttgactttattttatcttttg 10158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 20292 - 20235
Alignment:
Q  205 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 262  Q
    ||||||||||| |||||||| ||||||||| ||||  || | ||||||||||||||||    
T  20292 ttatatgaaaacaatttgacattattttatgttttattaaagaaataacttatacata 20235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 6563 - 6600
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttat 234  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  6563 cttatagcttatatgaaaatagtttgactttattttat 6600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 13583 - 13620
Alignment:
Q  197 cttataggttatatgaaaataatttgactttattttat 234  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  13583 cttatagcttatatgaaaatagtttgactttattttat 13620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 63366 - 63431
Alignment:
Q  213 aaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 278  Q
    |||| ||||| ||||||||||||||||| || ||||||| |||||| | || ||||| ||||||||    
T  63366 aaatcatttgtctttattttatcttttgttataaaaatagcttataaacaagcacttatatgataa 63431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University