View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9379_high_21 (Length: 246)
Name: NF9379_high_21
Description: NF9379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9379_high_21 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 19 - 232
Target Start/End: Original strand, 30848289 - 30848502
Alignment:
| Q |
19 |
atagacttgtttatttatatatacatgcatgcttgcatcaaattcctaatggaaactgatttgaaaggtgaaaactaatttgattaaatggtctatcaaa |
118 |
Q |
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| T |
30848289 |
atagacttatttatttatatatacatgcatgcttgcatcaaattcctaatggaaactgatttgaaaggtgaaaactaatttgattaaatggtctatcaaa |
30848388 |
T |
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| Q |
119 |
gaattgaaagtaattcttcgacaatatattatcatcatagaatattgacagcttcattacacacctatatcttattaacttttatctcctagacttgaag |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30848389 |
gaattgaaagtaattcttcgacaatatattatcatcatagaatattgacagcttcattacacacctatatcttattaacttttatctcctagacttgaag |
30848488 |
T |
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| Q |
219 |
gaatacagaataat |
232 |
Q |
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|||||||||||||| |
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| T |
30848489 |
gaatacagaataat |
30848502 |
T |
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