View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9379_low_2 (Length: 616)

Name: NF9379_low_2
Description: NF9379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9379_low_2
NF9379_low_2
[»] chr4 (45 HSPs)
chr4 (1-220)||(46038974-46039197)
chr4 (220-367)||(43286235-43286381)
chr4 (225-367)||(52464069-52464210)
chr4 (225-343)||(32767574-32767691)
chr4 (225-413)||(3415158-3415327)
chr4 (236-361)||(32594047-32594171)
chr4 (236-347)||(20034291-20034401)
chr4 (236-347)||(27870026-27870136)
chr4 (233-367)||(51401315-51401448)
chr4 (236-333)||(44341197-44341293)
chr4 (236-360)||(1705187-1705309)
chr4 (236-347)||(39345835-39345946)
chr4 (236-347)||(45522504-45522614)
chr4 (236-347)||(47295568-47295678)
chr4 (236-332)||(17543751-17543847)
chr4 (234-318)||(19240771-19240854)
chr4 (244-360)||(34859040-34859155)
chr4 (236-347)||(9455330-9455440)
chr4 (240-347)||(54134485-54134591)
chr4 (236-332)||(951377-951472)
chr4 (236-347)||(34030301-34030410)
chr4 (234-317)||(41361259-41361341)
chr4 (246-332)||(2323804-2323889)
chr4 (225-360)||(50004729-50004862)
chr4 (234-323)||(1324945-1325033)
chr4 (568-603)||(3414964-3414999)
chr4 (264-347)||(16623483-16623565)
chr4 (287-347)||(15194522-15194582)
chr4 (288-340)||(16029785-16029837)
chr4 (287-347)||(56264420-56264480)
chr4 (264-347)||(19474703-19474785)
chr4 (302-349)||(34031115-34031162)
chr4 (287-346)||(56520011-56520070)
chr4 (306-348)||(41882644-41882686)
chr4 (344-373)||(32767706-32767735)
chr4 (287-344)||(39240444-39240501)
chr4 (287-347)||(401374-401434)
chr4 (287-347)||(6643310-6643370)
chr4 (304-348)||(16624059-16624103)
chr4 (287-347)||(26706924-26706984)
chr4 (287-347)||(35666626-35666686)
chr4 (287-347)||(41140648-41140708)
chr4 (287-343)||(51435595-51435651)
chr4 (287-347)||(54094003-54094063)
chr4 (303-347)||(56114210-56114254)
[»] chr3 (49 HSPs)
chr3 (220-473)||(27969459-27969716)
chr3 (225-373)||(33982983-33983130)
chr3 (234-447)||(6888603-6888829)
chr3 (234-345)||(42854288-42854398)
chr3 (234-330)||(19975781-19975876)
chr3 (236-347)||(21075881-21075991)
chr3 (234-361)||(43735985-43736110)
chr3 (236-347)||(43746276-43746387)
chr3 (236-347)||(46311861-46311971)
chr3 (524-605)||(42853893-42853969)
chr3 (239-347)||(27877532-27877639)
chr3 (291-367)||(50737916-50737992)
chr3 (524-605)||(27969809-27969885)
chr3 (236-347)||(46219100-46219211)
chr3 (554-605)||(6888349-6888400)
chr3 (234-332)||(2869006-2869103)
chr3 (524-605)||(33983314-33983390)
chr3 (291-360)||(50774862-50774931)
chr3 (264-347)||(54313359-54313441)
chr3 (225-347)||(21389735-21389856)
chr3 (225-318)||(24310793-24310885)
chr3 (287-347)||(32774455-32774515)
chr3 (413-473)||(42854139-42854194)
chr3 (471-570)||(6888425-6888534)
chr3 (302-348)||(21392693-21392739)
chr3 (287-347)||(3995071-3995131)
chr3 (287-347)||(7910172-7910232)
chr3 (287-347)||(26823061-26823121)
chr3 (304-348)||(49507922-49507966)
chr3 (304-348)||(54312851-54312895)
chr3 (413-448)||(33983180-33983215)
chr3 (496-547)||(33983237-33983288)
chr3 (264-347)||(51885324-51885406)
chr3 (264-333)||(1460313-1460381)
chr3 (307-348)||(12769203-12769244)
chr3 (264-333)||(42481043-42481111)
chr3 (287-347)||(1842581-1842641)
chr3 (287-347)||(3974746-3974806)
chr3 (303-347)||(9301074-9301118)
chr3 (287-347)||(10267882-10267942)
chr3 (287-347)||(10804550-10804610)
chr3 (287-347)||(12768643-12768703)
chr3 (287-347)||(26898261-26898321)
chr3 (303-347)||(29522812-29522856)
chr3 (304-348)||(32773955-32773999)
chr3 (287-347)||(41209399-41209459)
chr3 (287-347)||(41933320-41933380)
chr3 (303-347)||(43088028-43088072)
chr3 (287-347)||(55423759-55423819)
[»] chr7 (38 HSPs)
chr7 (225-373)||(47381447-47381594)
chr7 (225-355)||(33604547-33604676)
chr7 (234-333)||(7505238-7505336)
chr7 (225-374)||(2621406-2621554)
chr7 (234-330)||(31272129-31272224)
chr7 (236-347)||(23025165-23025275)
chr7 (234-347)||(35709894-35710006)
chr7 (225-332)||(10993178-10993285)
chr7 (236-347)||(1873639-1873749)
chr7 (236-347)||(39494039-39494150)
chr7 (288-367)||(49112592-49112671)
chr7 (239-359)||(17511285-17511404)
chr7 (239-359)||(17541810-17541929)
chr7 (288-367)||(4266913-4266992)
chr7 (236-347)||(16526191-16526301)
chr7 (236-358)||(41200226-41200347)
chr7 (288-347)||(17475732-17475791)
chr7 (288-347)||(17577423-17577482)
chr7 (287-347)||(8613796-8613856)
chr7 (304-348)||(13598659-13598703)
chr7 (308-348)||(22791284-22791324)
chr7 (287-347)||(32795757-32795817)
chr7 (287-347)||(37471532-37471592)
chr7 (287-347)||(47761697-47761757)
chr7 (264-347)||(8781506-8781588)
chr7 (264-347)||(33626938-33627020)
chr7 (306-348)||(8782350-8782392)
chr7 (264-333)||(13598094-13598162)
chr7 (307-348)||(32527488-32527529)
chr7 (307-348)||(33626416-33626457)
chr7 (290-347)||(35528391-35528448)
chr7 (287-347)||(3319048-3319108)
chr7 (303-347)||(15457200-15457244)
chr7 (304-348)||(18833720-18833764)
chr7 (303-347)||(34202669-34202713)
chr7 (303-347)||(36643395-36643439)
chr7 (304-348)||(36643894-36643938)
chr7 (287-347)||(39560548-39560608)
[»] chr6 (28 HSPs)
chr6 (234-373)||(20139215-20139353)
chr6 (234-373)||(22193516-22193654)
chr6 (227-343)||(31472486-31472601)
chr6 (235-332)||(27966762-27966858)
chr6 (236-347)||(15065930-15066040)
chr6 (219-367)||(12076616-12076761)
chr6 (236-325)||(12272224-12272312)
chr6 (236-332)||(10997743-10997838)
chr6 (233-360)||(31655511-31655637)
chr6 (244-342)||(3044290-3044387)
chr6 (242-347)||(11369572-11369677)
chr6 (288-333)||(17869271-17869316)
chr6 (264-347)||(29034499-29034581)
chr6 (287-347)||(2067187-2067247)
chr6 (287-347)||(4170942-4171002)
chr6 (287-347)||(15068028-15068088)
chr6 (287-346)||(26555226-26555285)
chr6 (303-347)||(2289981-2290025)
chr6 (287-347)||(2703004-2703064)
chr6 (287-347)||(9035107-9035167)
chr6 (287-347)||(12577331-12577391)
chr6 (303-347)||(13835980-13836024)
chr6 (287-347)||(15183754-15183814)
chr6 (287-347)||(17547541-17547601)
chr6 (303-347)||(22988178-22988222)
chr6 (303-347)||(23800174-23800218)
chr6 (287-347)||(29641053-29641113)
chr6 (287-347)||(31511232-31511292)
[»] chr8 (37 HSPs)
chr8 (220-367)||(42739335-42739481)
chr8 (236-361)||(2349696-2349819)
chr8 (225-331)||(3940661-3940767)
chr8 (236-347)||(30436457-30436568)
chr8 (236-347)||(35813426-35813537)
chr8 (234-347)||(15243774-15243886)
chr8 (244-360)||(28968204-28968319)
chr8 (234-360)||(9201110-9201235)
chr8 (236-332)||(3654313-3654408)
chr8 (233-330)||(29894474-29894570)
chr8 (264-362)||(34347002-34347100)
chr8 (225-347)||(40027727-40027848)
chr8 (279-333)||(6142940-6142994)
chr8 (288-349)||(957506-957567)
chr8 (287-347)||(5927122-5927182)
chr8 (287-347)||(6266315-6266375)
chr8 (287-347)||(7433453-7433513)
chr8 (287-347)||(11202196-11202256)
chr8 (304-348)||(22486816-22486860)
chr8 (287-347)||(24101762-24101822)
chr8 (287-347)||(26098317-26098377)
chr8 (287-347)||(31894949-31895009)
chr8 (287-347)||(37819255-37819315)
chr8 (287-347)||(38231742-38231802)
chr8 (303-347)||(40027567-40027611)
chr8 (287-346)||(20823518-20823577)
chr8 (287-348)||(38894759-38894820)
chr8 (287-347)||(7161614-7161674)
chr8 (287-347)||(15041379-15041439)
chr8 (287-347)||(21412488-21412548)
chr8 (287-347)||(21806980-21807040)
chr8 (287-347)||(29940108-29940168)
chr8 (304-348)||(38895250-38895294)
chr8 (304-348)||(40027046-40027090)
chr8 (287-347)||(41644191-41644251)
chr8 (287-343)||(41827572-41827628)
chr8 (287-347)||(44679170-44679230)
[»] chr1 (39 HSPs)
chr1 (225-367)||(46237569-46237710)
chr1 (234-369)||(32057557-32057691)
chr1 (236-367)||(48470402-48470532)
chr1 (236-347)||(33189029-33189139)
chr1 (236-347)||(12745580-12745691)
chr1 (236-347)||(12756569-12756680)
chr1 (236-367)||(6501612-6501742)
chr1 (236-347)||(9660818-9660928)
chr1 (236-347)||(43781162-43781272)
chr1 (236-347)||(45757233-45757343)
chr1 (236-347)||(42763244-42763354)
chr1 (236-367)||(49229138-49229267)
chr1 (288-367)||(45565814-45565893)
chr1 (233-347)||(31489496-31489609)
chr1 (288-347)||(45039032-45039091)
chr1 (258-348)||(15699305-15699394)
chr1 (225-366)||(4220876-4221015)
chr1 (238-332)||(47188574-47188665)
chr1 (287-347)||(1858793-1858853)
chr1 (220-347)||(17331248-17331375)
chr1 (287-347)||(19406689-19406749)
chr1 (304-348)||(40412020-40412064)
chr1 (287-347)||(41310546-41310606)
chr1 (287-347)||(44922234-44922294)
chr1 (287-347)||(50511998-50512058)
chr1 (288-347)||(5114949-5115008)
chr1 (232-327)||(30533392-30533486)
chr1 (264-347)||(35985510-35985592)
chr1 (307-348)||(700524-700565)
chr1 (287-347)||(20722232-20722292)
chr1 (287-347)||(21088547-21088607)
chr1 (304-348)||(25422779-25422823)
chr1 (303-347)||(28199276-28199320)
chr1 (287-347)||(30723343-30723403)
chr1 (303-347)||(39995477-39995521)
chr1 (287-347)||(40412536-40412596)
chr1 (287-347)||(42102233-42102293)
chr1 (287-347)||(48812557-48812617)
chr1 (264-332)||(48940828-48940895)
[»] chr5 (43 HSPs)
chr5 (220-347)||(38976239-38976365)
chr5 (227-369)||(33908097-33908238)
chr5 (225-347)||(9996232-9996353)
chr5 (236-347)||(6955782-6955892)
chr5 (236-347)||(35038743-35038853)
chr5 (237-340)||(37206036-37206138)
chr5 (236-347)||(38356016-38356126)
chr5 (220-347)||(1398351-1398478)
chr5 (236-347)||(6238185-6238296)
chr5 (236-347)||(6899895-6900006)
chr5 (236-347)||(35838110-35838221)
chr5 (236-347)||(10642036-10642146)
chr5 (236-347)||(21731717-21731827)
chr5 (257-347)||(4975787-4975876)
chr5 (227-333)||(31230247-31230352)
chr5 (236-347)||(4699920-4700031)
chr5 (236-347)||(24477286-24477397)
chr5 (289-364)||(3436694-3436769)
chr5 (282-347)||(3296166-3296231)
chr5 (257-333)||(38986610-38986685)
chr5 (236-347)||(20338499-20338609)
chr5 (236-347)||(42860306-42860416)
chr5 (219-333)||(36866102-36866215)
chr5 (250-347)||(36016288-36016384)
chr5 (244-367)||(17085407-17085529)
chr5 (264-347)||(24566246-24566328)
chr5 (264-347)||(24607282-24607364)
chr5 (264-347)||(26264399-26264481)
chr5 (265-347)||(17320389-17320470)
chr5 (234-298)||(74980-75043)
chr5 (287-347)||(20122748-20122808)
chr5 (287-347)||(28759379-28759439)
chr5 (287-347)||(39479386-39479446)
chr5 (288-347)||(40917897-40917956)
chr5 (287-333)||(17016523-17016569)
chr5 (274-347)||(1845459-1845532)
chr5 (304-349)||(17320977-17321022)
chr5 (264-349)||(21162679-21162763)
chr5 (304-341)||(37205272-37205309)
chr5 (287-343)||(2466319-2466375)
chr5 (304-344)||(7344243-7344283)
chr5 (287-347)||(8320504-8320564)
chr5 (303-347)||(19646966-19647010)
[»] chr2 (35 HSPs)
chr2 (234-347)||(15614149-15614261)
chr2 (225-361)||(5271064-5271199)
chr2 (237-367)||(9470828-9470957)
chr2 (279-367)||(20922740-20922828)
chr2 (236-347)||(15560566-15560676)
chr2 (236-347)||(25096307-25096417)
chr2 (225-340)||(38838045-38838159)
chr2 (236-346)||(21747420-21747529)
chr2 (236-347)||(29201406-29201516)
chr2 (236-347)||(42730715-42730824)
chr2 (236-347)||(40000787-40000896)
chr2 (237-333)||(17920791-17920886)
chr2 (234-304)||(17071256-17071325)
chr2 (245-347)||(40861035-40861136)
chr2 (235-304)||(17088255-17088323)
chr2 (236-304)||(17077328-17077395)
chr2 (264-347)||(10822287-10822369)
chr2 (264-347)||(31618103-31618185)
chr2 (234-347)||(4564919-4565030)
chr2 (287-347)||(13247770-13247830)
chr2 (287-347)||(27495925-27495985)
chr2 (287-347)||(30801215-30801275)
chr2 (287-347)||(35439545-35439605)
chr2 (337-371)||(4565034-4565068)
chr2 (303-347)||(1002514-1002558)
chr2 (287-347)||(1346287-1346347)
chr2 (287-347)||(2650097-2650157)
chr2 (304-344)||(10821741-10821781)
chr2 (304-348)||(13312112-13312156)
chr2 (303-347)||(27552032-27552076)
chr2 (304-348)||(27554001-27554045)
chr2 (287-347)||(28222955-28223015)
chr2 (304-348)||(30556199-30556243)
chr2 (304-348)||(34314322-34314366)
chr2 (287-347)||(36240761-36240821)
[»] scaffold0295 (1 HSPs)
scaffold0295 (244-371)||(6177-6303)
[»] scaffold0219 (1 HSPs)
scaffold0219 (246-347)||(16630-16730)
[»] scaffold1449 (1 HSPs)
scaffold1449 (234-304)||(1581-1650)
[»] scaffold0664 (1 HSPs)
scaffold0664 (287-347)||(7792-7852)
[»] scaffold0019 (1 HSPs)
scaffold0019 (287-333)||(103134-103180)
[»] scaffold0661 (1 HSPs)
scaffold0661 (264-333)||(1589-1657)
[»] scaffold0036 (1 HSPs)
scaffold0036 (287-347)||(27666-27726)
[»] scaffold0007 (2 HSPs)
scaffold0007 (287-347)||(56273-56333)
scaffold0007 (287-347)||(231680-231740)


Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-103; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 46039197 - 46038974
Alignment:
Q  1 gtccgcagtctacagctaagttgaggtggctcattgaaagattttatccattattgtaagaaggtacatcatgtatgtagcaatactctcctatgaacg- 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||     
T  46039197 gtccgcagtctacagctaagttgaggtggctcattgaaatattttatccattattgtaagaaggtacatcatgtatgtaccaatactctcgtatgaacga 46039098  T
Q  100 ---gcaatgacattggtcttgtatttttacccgttcaagccaaattattgaattctgacttgtcatagtcaacaactaaaattgcatagaagcttcaagt 196  Q
       ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  46039097 acggcaatgacattggtcttgtatttttacccgttcaagccaaattattgaattttgacttgtcatagtcaacaactaaaattgcatagaagcttcaagt 46038998  T
Q  197 tgtggatcatatatgggatatgac 220  Q
    ||||||||||||||||||||||||    
T  46038997 tgtggatcatatatgggatatgac 46038974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 220 - 367
Target Start/End: Complemental strand, 43286381 - 43286235
Alignment:
Q  220 ctagggctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccgg 319  Q
    |||| |||||||||| |||| ||||||| |||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  43286381 ctagagctgtcaaaacgggctggcccgagagcccgaataaaacgtagggcttgggcc-taataattgcagcccgaatttttccagggctttttagcccgg 43286283  T
Q  320 cccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43286282 cccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 43286235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 225 - 367
Target Start/End: Complemental strand, 52464210 - 52464069
Alignment:
Q  225 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 324  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||  |||||||||||||| || ||||||||||||||| |||    
T  52464210 gctgtcaaaacgggccggcccgaaagcccgaataaaacgtagggcttgggcc-taataattacagcccgaatttttcaagagctttttagcccggctcga 52464112  T
Q  325 aaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 367  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  52464111 aaaagcccggagtccgttcgggccacgggcagcccgcaaaaaa 52464069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 225 - 343
Target Start/End: Original strand, 32767574 - 32767691
Alignment:
Q  225 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 324  Q
    |||||||||| ||||||||||||||||||| ||||||  ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  32767574 gctgtcaaaacgggccggcccgaaagcccgaataaaatatagggcttgggcc-taataattgcagcccgaatttttccagggctttttagcccggcccga 32767672  T
Q  325 aaaagcccggagcccgtta 343  Q
    ||||||||||| |||||||    
T  32767673 aaaagcccggaacccgtta 32767691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 225 - 413
Target Start/End: Complemental strand, 3415327 - 3415158
Alignment:
Q  225 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 324  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||                
T  3415327 gctgtcaaaatgggccggcccgaaagcccgaataaaacgtagggcttggg-cctaataattggagcccgaatttttccagggcttttt------------ 3415241  T
Q  325 aaaagcccggagcccgttagggccacgggcagcccgcaaaaaattaaga-tgggtcannnnnnnnnggtgtggtgtctgctgggcctgga 413  Q
       ||||||||||||||| |||||||||||||||||||||||||||||| |||||||         ||||||||||||||||||||||||    
T  3415240 ---agcccggagcccgttcgggccacgggcagcccgcaaaaaattaagagtgggtca----tttttggtgtggtgtctgctgggcctgga 3415158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 236 - 361
Target Start/End: Original strand, 32594047 - 32594171
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| ||||| | ||| ||  |||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| |    
T  32594047 gggccggcccgaaagcccgaataaaatgtaggacctggaccg-aataattgcagcccgaattttttcagggctttttaacccgacccgaaaaagcccgta 32594145  T
Q  336 gcccgttagggccacgggcagcccgc 361  Q
    |||||||   || |||||||||||||    
T  32594146 gcccgttcaagctacgggcagcccgc 32594171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 20034401 - 20034291
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  20034401 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 20034303  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  20034302 gcccgttagggc 20034291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 27870026 - 27870136
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  27870026 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccaaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 27870124  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  27870125 gcccgttagggc 27870136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 233 - 367
Target Start/End: Complemental strand, 51401448 - 51401315
Alignment:
Q  233 aatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 332  Q
    ||||||||||||||  ||||||  |||||| ||||| |||||| | || ||||  ||||||||||||||||| ||||||||||||||||||||||| |||    
T  51401448 aatgggccggcccgttagcccgagtaaaacttagggtttgggctcaaa-aattccagcccgaatttttccagagctttttagcccggcccgaaaaaaccc 51401350  T
Q  333 ggagcccgttagggccacgggcagcccgcaaaaaa 367  Q
    | | |||| | |||| | |||||||||||||||||    
T  51401349 gcaacccgctcgggctaagggcagcccgcaaaaaa 51401315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 236 - 333
Target Start/End: Original strand, 44341197 - 44341293
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    ||||||| ||||||||||| |||||| ||||||||||||||  |||||||| || ||| ||| ||||||||||||||||||||||||| |||||||||    
T  44341197 gggccggtccgaaagcccgaataaaatgtagggcttgggccg-aataattgcagtccggattcttccagggctttttagcccggcccgtaaaagcccg 44341293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 1705309 - 1705187
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| | ||||  ||||||  |||||| | |||||||||||||| |||||||||||||||||||||||||||| || |    
T  1705309 gggccggcccgaaagcccgaataaaatgcagggtctgggcca-aataatagcagcccgaatttttc-agggctttttagcccggcccgaaaaagctcgta 1705212  T
Q  336 gcccgttagggccacgggcagcccg 360  Q
    ||||||| ||||   ||||||||||    
T  1705211 gcccgttcgggctgagggcagcccg 1705187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 39345835 - 39345946
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 334  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  39345835 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaatagggctttttagcccggcccgtaaaagccctt 39345933  T
Q  335 agcccgttagggc 347  Q
     ||||||||||||    
T  39345934 ggcccgttagggc 39345946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 45522504 - 45522614
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    || |||||||||||||||||| ||||||||       
T  45522504 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagagctttttagcccggcccgtaaaagcccttg 45522602  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  45522603 gcccgttagggc 45522614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 47295568 - 47295678
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| ||||||||| || || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  47295568 gggccggcccgaaagcccgaataaaatgtagggctt-ggaccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 47295666  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  47295667 gcccgttagggc 47295678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 236 - 332
Target Start/End: Original strand, 17543751 - 17543847
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagccc 332  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||    
T  17543751 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaagagggctttttagcccggcccgtaaaagccc 17543847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 234 - 318
Target Start/End: Original strand, 19240771 - 19240854
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccg 318  Q
    |||| |||||||||||||||| |||||| |||||| ||||||| ||||||||| ||||||||||||| |||||| ||||||||||    
T  19240771 atggaccggcccgaaagcccgaataaaatgtagggtttgggcc-taataattgcagcccgaattttttcagggcattttagcccg 19240854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 244 - 360
Target Start/End: Complemental strand, 34859155 - 34859040
Alignment:
Q  244 ccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtta 343  Q
    |||||| |||| |||||| | ||||| ||||||  |||||| | |||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||    
T  34859155 ccgaaaacccgaataaaatgcagggcctgggccg-aataatagaagcctgaattttttcagggctttttagcccggcccaaaaaagcccgtagcccgtta 34859057  T
Q  344 gggccacgggcagcccg 360  Q
    ||||   ||||||||||    
T  34859056 gggctgagggcagcccg 34859040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 9455440 - 9455330
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||| ||||||||||| |||||| ||||||  ||| |   |||||||| ||||||||||||| ||||||||||||||  |||||||||||| ||| |    
T  9455440 gggccggtccgaaagcccgaataaaatgtagggactggactg-aataattgcagcccgaattttttcagggctttttagctgggcccgaaaaaggccgta 9455342  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  9455341 gcccgttagggc 9455330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 240 - 347
Target Start/End: Complemental strand, 54134591 - 54134485
Alignment:
Q  240 cggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagccc 339  Q
    ||||||||||||||| |||||| ||||||||||||||  |||||||||||||| || ||    ||||||||||||||||||||| ||||||||   ||||    
T  54134591 cggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccaaaattgaagagggctttttagcccggcccgtaaaagcccttggccc 54134493  T
Q  340 gttagggc 347  Q
    ||||||||    
T  54134492 gttagggc 54134485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 332
Target Start/End: Original strand, 951377 - 951472
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 332  Q
    ||||||||||||||||||| |||||| ||| |||||||| || ||||| ||||||||||| ||    ||||||||||||||||||||| ||||||||    
T  951377 gggccggcccgaaagcccgaataaaatgtaaggcttggg-ccgaataagtggagcccgaaattgaagagggctttttagcccggcccgtaaaagccc 951472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 34030301 - 34030410
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    |||||| |||||||||||| | ||||||||||||||||||| ||| ||| | |||| ||||||   ||||||||||| |||||||||| ||||||||| |    
T  34030301 gggccgacccgaaagcccgaa-aaaacgtagggcttgggcc-taaaaatggcagcctgaatttaaacagggctttttggcccggcccgtaaaagcccgaa 34030398  T
Q  336 gcccgttagggc 347  Q
    |||| |||||||    
T  34030399 gcccattagggc 34030410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 234 - 317
Target Start/End: Original strand, 41361259 - 41361341
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagccc 317  Q
    ||||||||||||||||||||| |||||||| | |||||||| ||||| ||||| |||||| |||||  ||||||||||||||||    
T  41361259 atgggccggcccgaaagcccgaataaaacgcatggcttggg-cctaaaaattgcagcccgtattttagcagggctttttagccc 41361341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 246 - 332
Target Start/End: Complemental strand, 2323889 - 2323804
Alignment:
Q  246 gaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 332  Q
    ||||||||| |||||| ||||||||||||||  ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||    
T  2323889 gaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagccc 2323804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 225 - 360
Target Start/End: Original strand, 50004729 - 50004862
Alignment:
Q  225 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 324  Q
    ||||||||||| |||||||||| ||||| | || ||| ||||||| ||||||  || ||| | ||||||||||||  ||||||||||||||| | |||||    
T  50004729 gctgtcaaaataggccggcccggaagcctgaattaaatgtagggcctgggccgaaaaaatagcagcccgaatttt--cagggctttttagcctgccccga 50004826  T
Q  325 aaaagcccggagcccgttagggccacgggcagcccg 360  Q
    ||| ||||  |||||| | |||| | ||||||||||    
T  50004827 aaaggcccacagcccgctcgggctaagggcagcccg 50004862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 234 - 323
Target Start/End: Complemental strand, 1325033 - 1324945
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccg 323  Q
    |||| |||| ||||||| ||| |||||| ||| |||||||||   || |||| ||||||||||||||||||||||||||||||| |||||    
T  1325033 atggaccggaccgaaagtccgaataaaatgtaaggcttgggctgaaa-aattagagcccgaatttttccagggctttttagcccagcccg 1324945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 568 - 603
Target Start/End: Complemental strand, 3414999 - 3414964
Alignment:
Q  568 cgcgattccgattctggcagctgaaatcacacaggt 603  Q
    ||||||||||||||||||||||||||||||||||||    
T  3414999 cgcgattccgattctggcagctgaaatcacacaggt 3414964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 264 - 347
Target Start/End: Original strand, 16623483 - 16623565
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||||| ||||||||||   |||||||||||    
T  16623483 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccgttagggc 16623565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 15194522 - 15194582
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  15194522 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 15194582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 340
Target Start/End: Original strand, 16029785 - 16029837
Alignment:
Q  288 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccg 340  Q
    |||| |||||||| ||||||||||||||||||||| |||||||| | ||||||    
T  16029785 agcctgaattttttcagggctttttagcccggcccaaaaaagccggcagcccg 16029837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 56264480 - 56264420
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  56264480 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 56264420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 19474785 - 19474703
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||| |||  |||| ||| ||||||||   |||||||||||||||||||| |||||||||||  ||| |||||||    
T  19474785 tagggcttgggccttaaatattg-agctcgaattttaatagggctttttagcccggccctaaaaagcccggtacccattagggc 19474703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 349
Target Start/End: Original strand, 34031115 - 34031162
Alignment:
Q  302 cagggctttttagcccggcccgaaaaagcccggagcccgttagggcca 349  Q
    ||||||||||| | ||||||||| |||||||| |||||||||||||||    
T  34031115 cagggctttttggtccggcccgataaagcccgaagcccgttagggcca 34031162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 56520011 - 56520070
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttaggg 346  Q
    |||||||||||||   |||||||||||||||| ||| |||||||||||  ||||||||||    
T  56520011 gagcccgaattttaatagggctttttagcccgaccctaaaaagcccggtacccgttaggg 56520070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 306 - 348
Target Start/End: Complemental strand, 41882686 - 41882644
Alignment:
Q  306 gctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||    
T  41882686 gctttttggcccggcccgataaagcccgaagcccgttagggcc 41882644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 373
Target Start/End: Original strand, 32767706 - 32767735
Alignment:
Q  344 gggccacgggcagcccgcaaaaaattaaga 373  Q
    ||||||||||||||||||||||||||||||    
T  32767706 gggccacgggcagcccgcaaaaaattaaga 32767735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 39240501 - 39240444
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttag 344  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  ||||||||    
T  39240501 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttag 39240444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 401434 - 401374
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||| ||||||  ||||||||||  |||||||||||    
T  401434 gagcccgaattttaatagggctttttagctcggcccttaaaagcccggtacccgttagggc 401374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 6643370 - 6643310
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||| |||||||||||||||  ||||||||||  |||||||||||    
T  6643370 gagcccgaattttaatagggttttttagcccggcccttaaaagcccggtacccgttagggc 6643310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 16624059 - 16624103
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  16624059 gggctttttggcccgacccgataaagcccgaagcccgttagggcc 16624103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 26706984 - 26706924
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   | ||||||||||||||||||  ||||||||||  |||||||||||    
T  26706984 gagcccgaattttaatatggctttttagcccggcccttaaaagcccggtacccgttagggc 26706924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 35666626 - 35666686
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||| ||||||||  ||||||||||  |||||||||||    
T  35666626 gagcccgaattttaatagggctttttaccccggcccttaaaagcccggtacccgttagggc 35666686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 41140648 - 41140708
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||| |||||||| ||||||||| |  |||||||||||    
T  41140648 gagcccgaattttaatagggctttttaacccggccctaaaaagccccgtacccgttagggc 41140708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 51435651 - 51435595
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtta 343  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||    
T  51435651 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 51435595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 54094063 - 54094003
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||| ||||  |||||||||||    
T  54094063 gagcccgaattttaatagggctttttagcccggcccttaaaagtccggtacccgttagggc 54094003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 56114254 - 56114210
Alignment:
Q  303 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||||||| || |||||||||||  |||||||||||    
T  56114254 agggctttttagcccggtcctaaaaagcccggtacccgttagggc 56114210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 7e-66; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 220 - 473
Target Start/End: Original strand, 27969459 - 27969716
Alignment:
Q  220 ctagggctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccgg 319  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  27969459 ctagagctgtcaaaatggaccgacccgaaagcccgcataaaacgtagggcttgggcc-taataattggagcccgaatttttcccgggctttttagcccgg 27969557  T
Q  320 cccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaattaaga-tgggtcannnnnnnnnggtgtggtgtctgctgggcctgg------ 412  Q
     |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||         |||||||||||||||||||||||          
T  27969558 accgaaaaagcccggagcccgttcgggccacgggcagcccgcaaaaaattaagagtgggtca----tttttggtgtggtgtctgctgggcctggattgga 27969653  T
Q  413 -------atattagggatccggcccaaattaaaataaccctaactcaactcacgtatgtgacatcagc 473  Q
           ||||||||||||||||||||||| ||||||||||     ||||||||||||||||||||||    
T  27969654 caacccaatattagggatccggcccaaattgaaataaccct-----aactcacgtatgtgacatcagc 27969716  T

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Target: chr3; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 225 - 373
Target Start/End: Original strand, 33982983 - 33983130
Alignment:
Q  225 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 324  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  33982983 gctgtcaaaatgggccggcccgaaagcccaaataaaatgtagggcttgggcc-taataattggagcccgaatttttccagggctttttagcccggcccgg 33983081  T
Q  325 aaaagcccggagcccgttagggccacgggcagcccgcaaaaaattaaga 373  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  33983082 aaaagcccggagcccgtttgggccacgggcagctcgcaaaaaattaaga 33983130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 234 - 447
Target Start/End: Complemental strand, 6888829 - 6888603
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    ||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6888829 atgggccggcccgaaagcccgcataaaatatagggcttgggcc-taataattggagcccgaatttttccagggctttttagcccggcccggaaaagcccg 6888731  T
Q  334 gagcccgttagggccacgggcag--------cccgcaaaaaattaagatgggtca------nnnnnnnnnggtgtggtgtctgctgggcctggatattag 419  Q
    ||||||||| |||||||||||||        ||||||||||||||| ||||||||                |||||||||||||||||||||||||||||    
T  6888730 gagcccgttcgggccacgggcagcccgacagcccgcaaaaaattaaaatgggtcatttttttttttttttcgtgtggtgtctgctgggcctggatattag 6888631  T
Q  420 ggatccggcccaaattaaaataacccta 447  Q
    |||||||||||||||||||| |||||||    
T  6888630 ggatccggcccaaattaaaaaaacccta 6888603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 234 - 345
Target Start/End: Complemental strand, 42854398 - 42854288
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||  ||||||||||    
T  42854398 atgggccagcccgaaagcccgcataaaacgtagggcttgggcc-taataattggagcccgaattttttcaaggctttttagcccggcctaaaaaagcccg 42854300  T
Q  334 gagcccgttagg 345  Q
    ||| ||||||||    
T  42854299 gagtccgttagg 42854288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 19975781 - 19975876
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagc 330  Q
    |||||||||||  |||||||| |||||| |||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  19975781 atgggccggccgaaaagcccgaataaaatgtagggcttgggtc-taataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagc 19975876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 21075991 - 21075881
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  21075991 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 21075893  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  21075892 gcccgttagggc 21075881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 234 - 361
Target Start/End: Original strand, 43735985 - 43736110
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    ||||||| ||||||||||||| |||||||| ||||| ||||||  || ||||||||||| |||||| | ||||||||||||||||||||| |||||||||    
T  43735985 atgggccagcccgaaagcccgaataaaacgcagggcctgggccgaaa-aattggagcccaaatttt-ctagggctttttagcccggcccgtaaaagcccg 43736082  T
Q  334 gagcccgttagggccacgggcagcccgc 361  Q
     | ||| || ||||| ||||||||||||    
T  43736083 taacccattcgggcctcgggcagcccgc 43736110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 43746387 - 43746276
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 334  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  43746387 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaagagggctttttagcccggcccgtaaaagccctt 43746289  T
Q  335 agcccgttagggc 347  Q
     ||||||||||||    
T  43746288 ggcccgttagggc 43746276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 46311861 - 46311971
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || |||||||||||||| || ||    ||||||||||||||||||||| ||||||||       
T  46311861 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccaaaattgaagagggctttttagcccggcccgtaaaagcccttg 46311959  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  46311960 gcccgttagggc 46311971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 524 - 605
Target Start/End: Complemental strand, 42853969 - 42853893
Alignment:
Q  524 cacgcgattccgattccgcgattccattcatcaagctcacgccgcgcgattccgattctggcagctgaaatcacacaggttc 605  Q
    |||||||||||||||||||||||||  |||||||||||| ||     |||||||||||||||||||||||||||||||||||    
T  42853969 cacgcgattccgattccgcgattccgatcatcaagctcaggc-----gattccgattctggcagctgaaatcacacaggttc 42853893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 239 - 347
Target Start/End: Original strand, 27877532 - 27877639
Alignment:
Q  239 ccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcc 338  Q
    |||| ||||||||||| |||||| ||||||||||||||  ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||   |||    
T  27877532 ccggtccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttggcc 27877630  T
Q  339 cgttagggc 347  Q
    |||||||||    
T  27877631 cgttagggc 27877639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 50737992 - 50737916
Alignment:
Q  291 ccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 367  Q
    |||||||||| ||||| |||||||||||||||||||||||||| ||| ||||||||| | | |||||||||||||||    
T  50737992 ccgaattttttcagggttttttagcccggcccgaaaaagcccgaagctcgttagggctaagagcagcccgcaaaaaa 50737916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 524 - 605
Target Start/End: Original strand, 27969809 - 27969885
Alignment:
Q  524 cacgcgattccgattccgcgattccattcatcaagctcacgccgcgcgattccgattctggcagctgaaatcacacaggttc 605  Q
    |||||||||||||||| ||||||||  |||||||||||||||     ||||| |||||||||||||||||||||||||||||    
T  27969809 cacgcgattccgattctgcgattccgatcatcaagctcacgc-----gattctgattctggcagctgaaatcacacaggttc 27969885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 46219100 - 46219211
Alignment:
Q  236 gggccggcccgaaa-gcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgg 334  Q
    |||||||||||||| ||||| |||||| ||||||||||||||  ||||||||||||||||| ||    |||||||||||||| |||||| ||||||||      
T  46219100 gggccggcccgaaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaattgaagagggctttttagccgggcccgtaaaagccctt 46219198  T
Q  335 agcccgttagggc 347  Q
     ||||||||||||    
T  46219199 ggcccgttagggc 46219211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 554 - 605
Target Start/End: Complemental strand, 6888400 - 6888349
Alignment:
Q  554 tcaagctcacgccgcgcgattccgattctggcagctgaaatcacacaggttc 605  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  6888400 tcaagctcacaccgtgcgattccgattctggcagctgaaatcacacaggttc 6888349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 234 - 332
Target Start/End: Original strand, 2869006 - 2869103
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 332  Q
    |||||| |||||||||||||| ||||||||||| ||||||| ||| | ||||| ||||||||||| |  ||||||||||| |||||||||  |||||||    
T  2869006 atgggctggcccgaaagcccgaataaaacgtagagcttggg-cctgaaaattgcagcccgaatttctttagggctttttaacccggcccgtgaaagccc 2869103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 524 - 605
Target Start/End: Original strand, 33983314 - 33983390
Alignment:
Q  524 cacgcgattccgattccgcgattccattcatcaagctcacgccgcgcgattccgattctggcagctgaaatcacacaggttc 605  Q
    ||||||||||||||||||||||||   ||||||||||||     ||||||||||||| ||| ||||||||||||||||||||    
T  33983314 cacgcgattccgattccgcgattcgtatcatcaagctca-----cgcgattccgattatggaagctgaaatcacacaggttc 33983390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 291 - 360
Target Start/End: Original strand, 50774862 - 50774931
Alignment:
Q  291 ccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggccacgggcagcccg 360  Q
    |||||||||| ||||| |||||||||||||||||||||||||| ||| ||||||||| | | ||||||||    
T  50774862 ccgaattttttcagggttttttagcccggcccgaaaaagcccgaagctcgttagggctaagagcagcccg 50774931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 54313441 - 54313359
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||||| |||||||||||  |||||||||||    
T  54313441 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggccctaaaaagcccggtacccgttagggc 54313359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 21389735 - 21389856
Alignment:
Q  225 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 324  Q
    |||||||||| |||||||| |||||||| | | |||| |||||||||||| ||||| ||| | ||||| |||||    |||| ||||| |||| |||||     
T  21389735 gctgtcaaaacgggccggctcgaaagcctgaaaaaaatgtagggcttggg-cctaaaaatggcagcccaaatttaaatagggttttttggcccagcccgt 21389833  T
Q  325 aaaagcccggagcccgttagggc 347  Q
    ||||||||| |||||||||||||    
T  21389834 aaaagcccgaagcccgttagggc 21389856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 225 - 318
Target Start/End: Original strand, 24310793 - 24310885
Alignment:
Q  225 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccg 318  Q
    |||||||||| |||||||||||||| |||| ||||||||||||| ||  | ||||| ||||| |||||||||||||  |||  |||||||||||    
T  24310793 gctgtcaaaacgggccggcccgaaaacccgaataaaacgtaggg-tttagacctaaaaattgcagcccgaatttttttaggattttttagcccg 24310885  T

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Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 32774515 - 32774455
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||||||||||||| |||||||||||  |||||||||||    
T  32774515 gagcccgaattttaatagggctttttagcccggccctaaaaagcccggtacccgttagggc 32774455  T

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Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 473
Target Start/End: Complemental strand, 42854194 - 42854139
Alignment:
Q  413 atattagggatccggcccaaattaaaataaccctaactcaactcacgtatgtgacatcagc 473  Q
    ||||||||||||||||||||||| ||||||||||||     ||||||||||||||||||||    
T  42854194 atattagggatccggcccaaattgaaataaccctaa-----ctcacgtatgtgacatcagc 42854139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 471 - 570
Target Start/End: Complemental strand, 6888534 - 6888425
Alignment:
Q  471 agcggcctcactctctca---ctcacagtcacacaccgtca-------aactcttttcttctccacgc-----gattccgattccgcgattccattcatc 555  Q
    ||||||||||||||||||   ||||||||||||||||||||       ||||||||||||||||||||     |||||||||||     |||||||||||    
T  6888534 agcggcctcactctctcagttctcacagtcacacaccgtcatccgtcaaactcttttcttctccacgccacgcgattccgattc-----ttccattcatc 6888440  T
Q  556 aagctcacgccgcgc 570  Q
    |||||||||||||||    
T  6888439 aagctcacgccgcgc 6888425  T

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Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 21392693 - 21392739
Alignment:
Q  302 cagggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  21392693 cagggctttttggcccggcccgataaagcccgaagcccgttagggcc 21392739  T

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Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 3995071 - 3995131
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||||||||||||| ||||||||||   |||||||||||    
T  3995071 gagcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccgttagggc 3995131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 7910232 - 7910172
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  7910232 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 7910172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 26823061 - 26823121
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  26823061 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 26823121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 49507922 - 49507966
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||    
T  49507922 gggctttttggcccggcccgataaagcccgaagcccgttagggcc 49507966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 54312895 - 54312851
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||    
T  54312895 gggctttttggcccggcccgataaagcccgaagcccgttagggcc 54312851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 448
Target Start/End: Original strand, 33983180 - 33983215
Alignment:
Q  413 atattagggatccggcccaaattaaaataaccctaa 448  Q
    ||||||||||||||||||||||| ||||||||||||    
T  33983180 atattagggatccggcccaaattgaaataaccctaa 33983215  T

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Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 496 - 547
Target Start/End: Original strand, 33983237 - 33983288
Alignment:
Q  496 tcacacaccgtcaaactcttttcttctccacgcgattccgattccgcgattc 547  Q
    |||||||| |||| ||||||||||||||||||||||||  ||||| ||||||    
T  33983237 tcacacacggtcacactcttttcttctccacgcgattcacattccacgattc 33983288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 51885406 - 51885324
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||||| |||||| |||   |||||||||||    
T  51885406 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggccctaaaaagtccgctacccgttagggc 51885324  T

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Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 1460381 - 1460313
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    ||||||||||||| |||  |||| ||||||||||||   || ||||||||||||||||| ||||||||||    
T  1460381 tagggcttgggccttaaatattg-agcccgaattttaatagagctttttagcccggccctaaaaagcccg 1460313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 348
Target Start/End: Original strand, 12769203 - 12769244
Alignment:
Q  307 ctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    |||||| ||||||||||| |||||||| ||||||||||||||    
T  12769203 ctttttggcccggcccgataaagcccgaagcccgttagggcc 12769244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 42481111 - 42481043
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    ||||||||||||| |||  |||| |||||| |||||   |||||||||||||||||||| ||||||||||    
T  42481111 tagggcttgggccttaaatattg-agcccggattttaatagggctttttagcccggccctaaaaagcccg 42481043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 1842581 - 1842641
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   | ||||||||||||||||||  ||||||||||  |||||||||||    
T  1842581 gagcccgaattttaatatggctttttagcccggcccttaaaagcccggtacccgttagggc 1842641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 3974806 - 3974746
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||||||||||||| ||||| ||||   |||||||||||    
T  3974806 gagcccgaattttaatagggctttttagcccggccctaaaaatcccgctacccgttagggc 3974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 9301118 - 9301074
Alignment:
Q  303 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||    
T  9301118 agggctttttagcccggcccttaaaagcccggtacccgttagggc 9301074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 10267882 - 10267942
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  |||||||||   |||||||||||    
T  10267882 gagcccgaattttaatagggctttttagcccggcccttaaaagcccgttacccgttagggc 10267942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 10804610 - 10804550
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  |||||||| |  |||||||||||    
T  10804610 gagcccgaattttaatagggctttttagcccggcccttaaaagcccagtacccgttagggc 10804550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 12768643 - 12768703
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||||||| ||||| |||||||||||   ||||||||||    
T  12768643 gagcccgaattttaatagggctttttagcctggccctaaaaagcccggtatccgttagggc 12768703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 26898261 - 26898321
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||| ||||  |||||||||||    
T  26898261 gagcccgaattttaatagggctttttagcccggcccttaaaagtccggtacccgttagggc 26898321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 29522856 - 29522812
Alignment:
Q  303 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||||||||| ||||||||||   |||||||||||    
T  29522856 agggctttttagcccggccctaaaaagcccgctacccgttagggc 29522812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 32773999 - 32773955
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  32773999 gggcttttttgcccggcccgataaaggccgaagcccgttagggcc 32773955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 41209459 - 41209399
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||||||||| ||| |||||| ||||  |||||||||||    
T  41209459 gagcccgaattttaatagggctttttagcccgaccctaaaaagtccggtacccgttagggc 41209399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 41933320 - 41933380
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||| ||||||||||  ||||||||||  |||||||||||    
T  41933320 gagcccgaattttaatagggcttttcagcccggcccttaaaagcccggtacccgttagggc 41933380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 43088028 - 43088072
Alignment:
Q  303 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||    
T  43088028 agggctttttagcccggcccttaaaagcccggtacccgttagggc 43088072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 55423759 - 55423819
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||| |||||||||||||||  ||||||||||  |||||||||||    
T  55423759 gagcccgaattttaatagggttttttagcccggcccttaaaagcccggtacccgttagggc 55423819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 125; Significance: 4e-64; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 225 - 373
Target Start/End: Complemental strand, 47381594 - 47381447
Alignment:
Q  225 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 324  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  47381594 gctgtcaaaatgggccggcccgaaaatccgcataaaacgtagggcttgggcc-taataattggagcccgaatttttccagggctttttagcccggcccaa 47381496  T
Q  325 aaaagcccggagcccgttagggccacgggcagcccgcaaaaaattaaga 373  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47381495 aaaagcccggagcccgttcgggccacgggcagcccgcaaaaaattaaga 47381447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 225 - 355
Target Start/End: Original strand, 33604547 - 33604676
Alignment:
Q  225 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 324  Q
    ||||||||||  |||||||||||||| |||  |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  33604547 gctgtcaaaacaggccggcccgaaagtccgagtaaaacgtagggcttgggcc-taataattgtagcccgaatttttccagggctttttagcccgacccga 33604645  T
Q  325 aaaagcccggagcccgttagggccacgggca 355  Q
    ||||||||  |||||||||||||||||||||    
T  33604646 aaaagcccatagcccgttagggccacgggca 33604676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 234 - 333
Target Start/End: Original strand, 7505238 - 7505336
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    ||||||||||||||||||| | |||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  7505238 atgggccggcccgaaagcctgaataaaatgtagggcttgggcc-taataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 7505336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 225 - 374
Target Start/End: Complemental strand, 2621554 - 2621406
Alignment:
Q  225 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 324  Q
    |||||||||| ||| | ||  ||||||||| ||||||||||||| ||| ||| ||||||||| ||||||||||||  || ||| |||||  ||||||| |    
T  2621554 gctgtcaaaacgggtcagcttgaaagcccgaataaaacgtagggtttgagcc-taataattgcagcccgaattttctcaaggccttttaatccggcccaa 2621456  T
Q  325 aaaagcccggagcccgttagggccacgggcagcccgcaaaaaattaagat 374  Q
    ||||||||| |||||||| ||||||||| |||||||| ||||||||||||    
T  2621455 aaaagcccgtagcccgtttgggccacggacagcccgcgaaaaattaagat 2621406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 234 - 330
Target Start/End: Complemental strand, 31272224 - 31272129
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagc 330  Q
    |||||||| ||| |||||||| |||||| |||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||    
T  31272224 atgggccgacccaaaagcccgaataaaatgtagggcttgggcc-taataattgcagcacgaatttttccagggctttttagcccggcccgtaaaagc 31272129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 23025165 - 23025275
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||  |    
T  23025165 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagccctta 23025263  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  23025264 gcccgttagggc 23025275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 234 - 347
Target Start/End: Original strand, 35709894 - 35710006
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    ||||||| ||||||||||||| |||||||| |||||||||||| ||| ||||| |||||  |||||  ||||||||||||||||||||||||||||||||    
T  35709894 atgggccagcccgaaagcccgaataaaacgcagggcttgggcc-taaaaattgcagcccatattttatcagggctttttagcccggcccgaaaaagcccg 35709992  T
Q  334 gagcccgttagggc 347  Q
     | |||||| ||||    
T  35709993 caacccgttcgggc 35710006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 225 - 332
Target Start/End: Original strand, 10993178 - 10993285
Alignment:
Q  225 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccg 323  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||  |||||||||||| |||| |||    |||||||||||||||||||||    
T  10993178 gctgtcaaaatgggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagctcgaaatttgaagagggctttttagcccggcccg 10993276  T
Q  324 aaaaagccc 332  Q
     ||||||||    
T  10993277 taaaagccc 10993285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 1873639 - 1873749
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  1873639 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 1873737  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  1873738 gcccgttagggc 1873749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 39494150 - 39494039
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 334  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||| | ||||||||      
T  39494150 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaatagggctttttagcccggcctgtaaaagccctt 39494052  T
Q  335 agcccgttagggc 347  Q
     ||||||||||||    
T  39494051 ggcccgttagggc 39494039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 288 - 367
Target Start/End: Original strand, 49112592 - 49112671
Alignment:
Q  288 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 367  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||  | |||||| |||| | |||||||||||||||||    
T  49112592 agcccgaattttttcagggctttttagcccgacccgaaaaagcccaaaacccgttcgggctaagggcagcccgcaaaaaa 49112671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 359
Target Start/End: Complemental strand, 17511404 - 17511285
Alignment:
Q  239 ccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcc 338  Q
    |||||||||||||| | |||||| ||||| | ||||||   | ||| | ||||||||||||| ||||| |||||||||||||||||||||||||| |||     
T  17511404 ccggcccgaaagcctgaataaaatgtaggtcctgggccgata-aatagtagcccgaattttttcagggttttttagcccggcccgaaaaagcccgaagct 17511306  T
Q  339 cgttagggccacgggcagccc 359  Q
    |||| |||| | |||||||||    
T  17511305 cgttcgggctaagggcagccc 17511285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 359
Target Start/End: Original strand, 17541810 - 17541929
Alignment:
Q  239 ccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcc 338  Q
    |||||||||||||| | |||||| ||||| | ||||||   | ||| | ||||||||||||| ||||| |||||||||||||||||||||||||| |||     
T  17541810 ccggcccgaaagcctgaataaaatgtaggtcctgggccgata-aatagtagcccgaattttttcagggttttttagcccggcccgaaaaagcccgaagct 17541908  T
Q  339 cgttagggccacgggcagccc 359  Q
    |||| |||| | |||||||||    
T  17541909 cgttcgggctaagggcagccc 17541929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 288 - 367
Target Start/End: Original strand, 4266913 - 4266992
Alignment:
Q  288 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 367  Q
    ||||||||||||| |||||||||||||||| || |||||| ||||| ||| |||| |||| | |||||||||||||||||    
T  4266913 agcccgaattttttcagggctttttagcccagcacgaaaatgcccgaagctcgttcgggctaagggcagcccgcaaaaaa 4266992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 16526191 - 16526301
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||| ||| |||||| |||||||||| | || ||||||||||||||||| ||    |||||||||||| |||||||| ||||||||       
T  16526191 gggccggcccgaaagtccgaataaaatgtagggcttgag-ccgaataattggagcccgaaattgaagagggctttttagtccggcccgtaaaagcccttg 16526289  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  16526290 gcccgttagggc 16526301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 236 - 358
Target Start/End: Original strand, 41200226 - 41200347
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||  |||||| ||||||| || |||   | ||| | ||||||||||||| ||||| |||||||||||| ||||||||||||| |    
T  41200226 gggccggcccgaaagcccaaataaaatgtagggcctgagccgata-aatagcagcccgaattttttcagggttttttagcccggtccgaaaaagcccgaa 41200324  T
Q  336 gcccgttagggccacgggcagcc 358  Q
    || |||| |||| | ||||||||    
T  41200325 gcacgttcgggctaagggcagcc 41200347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 347
Target Start/End: Complemental strand, 17475791 - 17475732
Alignment:
Q  288 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||| ||| |||||||||    
T  17475791 agcccgaattttttcagggttttttagcccgacccgaaaaagcccgaagctcgttagggc 17475732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 17577423 - 17577482
Alignment:
Q  288 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||| ||| |||||||||    
T  17577423 agcccgaattttttcagggttttttagcccgacccgaaaaagcccgaagctcgttagggc 17577482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 8613796 - 8613856
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  8613796 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 8613856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 13598659 - 13598703
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||    
T  13598659 gggctttttggcccggcccgataaagcccgaagcccgttagggcc 13598703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 22791324 - 22791284
Alignment:
Q  308 tttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  22791324 tttttagcccggcccgataaagcccgaagcccgttagggcc 22791284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 32795757 - 32795817
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  32795757 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 32795817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 37471592 - 37471532
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  37471592 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 37471532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 47761757 - 47761697
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  47761757 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 47761697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 347
Target Start/End: Original strand, 8781506 - 8781588
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||| |||  |||| ||||||||||||   ||||||||||||||||| || ||||||||||   |||||||||||    
T  8781506 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggtcctaaaaagcccgctacccgttagggc 8781588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 33627020 - 33626938
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||||| ||||| ||||   |||||||||||    
T  33627020 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggccctaaaaaccccgctacccgttagggc 33626938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 306 - 348
Target Start/End: Original strand, 8782350 - 8782392
Alignment:
Q  306 gctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||    
T  8782350 gctttttggcccggcccgataaagcccgaagcccgttagggcc 8782392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 13598094 - 13598162
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    ||||||||||||| |||  |||| || |||||||||   |||||||||||||||||||| ||||||||||    
T  13598094 tagggcttgggccttaaatattg-agtccgaattttaatagggctttttagcccggccctaaaaagcccg 13598162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 32527529 - 32527488
Alignment:
Q  307 ctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    |||||| ||||||||||| |||||||| ||||||||||||||    
T  32527529 ctttttggcccggcccgataaagcccgaagcccgttagggcc 32527488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 33626457 - 33626416
Alignment:
Q  307 ctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    |||||| ||||||||||| |||||||| ||||||||||||||    
T  33626457 ctttttggcccggcccgataaagcccgaagcccgttagggcc 33626416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 35528448 - 35528391
Alignment:
Q  290 cccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||   |||| ||||||||||||||| |||||||||||  |||||||||||    
T  35528448 cccgaattttaatagggttttttagcccggccctaaaaagcccggtacccgttagggc 35528391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 3319108 - 3319048
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||  |||||||||||||| |||||||||||  |||||||||||    
T  3319108 gagcccgaattttaatagggtcttttagcccggccctaaaaagcccggtacccgttagggc 3319048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 15457244 - 15457200
Alignment:
Q  303 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||| ||||| |||||||||||  |||||||||||    
T  15457244 agggctttttagccgggccctaaaaagcccggtacccgttagggc 15457200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 18833764 - 18833720
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||| ||||||| ||| |||||||| ||||||||||||||    
T  18833764 gggctttttggcccggcacgataaagcccgaagcccgttagggcc 18833720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 34202713 - 34202669
Alignment:
Q  303 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||    
T  34202713 agggctttttagcccggcccttaaaagcccggtacccgttagggc 34202669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 36643395 - 36643439
Alignment:
Q  303 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||| |||||||| |||||||||||  |||||||||||    
T  36643395 agggctttttaccccggccctaaaaagcccggtacccgttagggc 36643439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 36643894 - 36643938
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  36643894 gggctttttggcccggcccgataaagtccgaagcccgttagggcc 36643938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 39560548 - 39560608
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  |||||| |||  |||||||||||    
T  39560548 gagcccgaattttaatagggctttttagcccggcccttaaaagctcggtacccgttagggc 39560608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 4e-61; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 234 - 373
Target Start/End: Original strand, 20139215 - 20139353
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20139215 atgggccggcccgaaagcccgaataaaacgtagggcttgggcc-taataattgcagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 20139313  T
Q  334 gagcccgttagggccacgggcagcccgcaaaaaattaaga 373  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  20139314 gagcccgttcgggccacgggcagcccgcaaaaaattaaga 20139353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 234 - 373
Target Start/End: Complemental strand, 22193654 - 22193516
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22193654 atgggccggcccgaaagcccgaataaaacgtagggcttgggcc-taataattgcagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 22193556  T
Q  334 gagcccgttagggccacgggcagcccgcaaaaaattaaga 373  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  22193555 gagcccgttcgggccacgggcagcccgcaaaaaattaaga 22193516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 227 - 343
Target Start/End: Complemental strand, 31472601 - 31472486
Alignment:
Q  227 tgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaa 326  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  31472601 tgtcaaaacgggccggcccgaaagcccgaataaaacgtagggcttgggcc-taataattgcagcccgaatttttctagggctttttagccaggcccgaaa 31472503  T
Q  327 aagcccggagcccgtta 343  Q
    ||||| |||||||||||    
T  31472502 aagccaggagcccgtta 31472486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 27966858 - 27966762
Alignment:
Q  235 tgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 332  Q
    ||||||||||||||||||||  ||||| |||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||  ||||||||    
T  27966858 tgggccggcccgaaagcccgagtaaaatgtagggcttgggcc-taataattgcagcccaaatttttccagggctttttagcccggcccataaaagccc 27966762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 15065930 - 15066040
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  15065930 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 15066028  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  15066029 gcccgttagggc 15066040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 219 - 367
Target Start/End: Complemental strand, 12076761 - 12076616
Alignment:
Q  219 actagggctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccg 318  Q
    ||||| ||||| ||||||| ||| |||||||||||| |||||| ||||||| ||| |  |||  || | ||||| ||||||| |||||||||||| ||||    
T  12076761 actagagctgttaaaatggaccg-cccgaaagcccgaataaaatgtagggcctggccgataa--atagcagcccaaattttttcagggctttttaacccg 12076665  T
Q  319 gcccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 367  Q
    ||||||||||||||| || |||||||||| | |||||||| ||| ||||    
T  12076664 gcccgaaaaagcccgaagtccgttagggctaagggcagcctgcagaaaa 12076616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 236 - 325
Target Start/End: Complemental strand, 12272312 - 12272224
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaa 325  Q
    ||||||||||||||||||| |||||| ||||||| ||||||   | ||| | ||||||||||||| ||||||||||||||||||||||||    
T  12272312 gggccggcccgaaagcccgaataaaatgtagggcctgggccgata-aatagcagcccgaattttttcagggctttttagcccggcccgaa 12272224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 332
Target Start/End: Original strand, 10997743 - 10997838
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 332  Q
    |||||| |||||||||||| |||||| | ||||||||||||  ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||    
T  10997743 gggccgacccgaaagcccgaataaaatggagggcttgggccg-aataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagccc 10997838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 360
Target Start/End: Complemental strand, 31655637 - 31655511
Alignment:
Q  233 aatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 332  Q
    |||||||| ||||||||||||| ||||||| ||||| ||||||| ||| ||||  |||||||||   | | |||||||||||||||| ||||||||||||    
T  31655637 aatgggccagcccgaaagcccgaataaaacatagggtttgggcc-taaaaattacagcccgaataaattccgggctttttagcccggtccgaaaaagccc 31655539  T
Q  333 ggagcccgttagggccacgggcagcccg 360  Q
    |  ||||||| ||||  |||| ||||||    
T  31655538 gttgcccgttcgggcttcgggtagcccg 31655511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 244 - 342
Target Start/End: Original strand, 3044290 - 3044387
Alignment:
Q  244 ccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtt 342  Q
    ||||||||||| |||||| | ||||| ||||||  |||||| | ||||||||||||| ||||| ||||||||||||||||||||  |||| ||||||||    
T  3044290 ccgaaagcccgaataaaatgcagggcctgggccg-aataatagcagcccgaattttttcagggttttttagcccggcccgaaaatacccgtagcccgtt 3044387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 242 - 347
Target Start/End: Complemental strand, 11369677 - 11369572
Alignment:
Q  242 gcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccggagcccg 340  Q
    ||||||||||||| |||||| |||| | |||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||   |||||    
T  11369677 gcccgaaagcccgaataaaatgtagagtttgggccg-aataattggagcccgaaatttaaagagggctttttagcccggcccgtaaaagcccttggcccg 11369579  T
Q  341 ttagggc 347  Q
    |||||||    
T  11369578 ttagggc 11369572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 17869316 - 17869271
Alignment:
Q  288 agcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  17869316 agcccgaattttttcagggttttttagcccggcccgaaaaagcccg 17869271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 29034581 - 29034499
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||||| |||||||||||  ||| |||||||    
T  29034581 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggccctaaaaagcccggtacccattagggc 29034499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 2067187 - 2067247
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  2067187 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 2067247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 4171002 - 4170942
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  4171002 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 4170942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 15068088 - 15068028
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  15068088 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 15068028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 346
Target Start/End: Complemental strand, 26555285 - 26555226
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttaggg 346  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  ||||||||||    
T  26555285 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttaggg 26555226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 2289981 - 2290025
Alignment:
Q  303 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||||||||| ||||||| |||  |||||||||||    
T  2289981 agggctttttagcccggccctaaaaagctcggtacccgttagggc 2290025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 2703064 - 2703004
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  |||||||| |  |||||||||||    
T  2703064 gagcccgaattttaatagggctttttagcccggcccttaaaagcccagtacccgttagggc 2703004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 9035167 - 9035107
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||| ||||||  ||||||||||  |||||||||||    
T  9035167 gagcccgaattttaatagggctttttagcacggcccttaaaagcccggtacccgttagggc 9035107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 12577391 - 12577331
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||| |||| |||||||| ||  |||||||||||    
T  12577391 gagcccgaattttaatagggctttttagcccagccctaaaaagcctggtacccgttagggc 12577331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 13835980 - 13836024
Alignment:
Q  303 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||||||||| ||||||||||   |||||||||||    
T  13835980 agggctttttagcccggccctaaaaagcccgatacccgttagggc 13836024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 15183814 - 15183754
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||||||||||||   ||||||||||  |||||||||||    
T  15183814 gagcccgaattttaatagggctttttagcccggcctttaaaagcccggttcccgttagggc 15183754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 17547541 - 17547601
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||| ||||||||||||||||  ||||||||||  |||||||||||    
T  17547541 gagcccgaattttaataggactttttagcccggcccttaaaagcccggtacccgttagggc 17547601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 22988222 - 22988178
Alignment:
Q  303 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||    
T  22988222 agggctttttagcccggcccttaaaagcccggtacccgttagggc 22988178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 23800174 - 23800218
Alignment:
Q  303 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||    
T  23800174 agggctttttagcccggcccttaaaagcccggtacccgttagggc 23800218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 29641113 - 29641053
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  |||||||||   |||||||||||    
T  29641113 gagcccgaattttaatagggctttttagcccggcccttaaaagcccgatacccgttagggc 29641053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 31511292 - 31511232
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  |||||||||   |||||||||||    
T  31511292 gagcccgaattttaatagggctttttagcccggcccttaaaagcccgatacccgttagggc 31511232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 1e-58; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 220 - 367
Target Start/End: Complemental strand, 42739481 - 42739335
Alignment:
Q  220 ctagggctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccgg 319  Q
    |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  42739481 ctagagctgtcaaaacgggccggcccgaaagcccgaataaaacgtagggcttgggcc-taataattgcagcccgaatttttccagggctttttagcccgg 42739383  T
Q  320 cccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 367  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  42739382 cccaaaaaagcccggagcccgttcgggccacgggcagcccgcaaaaaa 42739335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 236 - 361
Target Start/End: Original strand, 2349696 - 2349819
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||| ||||||||||||| |||||| ||||||| ||||||  |||||||| ||| |||||||||| |||||||||||||||||||| |||||||||| |    
T  2349696 gggccagcccgaaagcccgaataaaatgtagggcctgggccg-aataattgcagctcgaatttttc-agggctttttagcccggcccaaaaaagcccgta 2349793  T
Q  336 gcccgttagggccacgggcagcccgc 361  Q
    |||||||  ||| |||||||||||||    
T  2349794 gcccgttcaggctacgggcagcccgc 2349819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 225 - 331
Target Start/End: Original strand, 3940661 - 3940767
Alignment:
Q  225 gctgtcaaaatgggccggccc-gaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccg 323  Q
    ||||||||||||||||||||| ||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    |||||||||||||||||||||    
T  3940661 gctgtcaaaatgggccggccccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccg 3940759  T
Q  324 aaaaagcc 331  Q
     |||||||    
T  3940760 taaaagcc 3940767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 30436568 - 30436457
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 334  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  30436568 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaagagggctttttagcccggcccgtaaaagccctt 30436470  T
Q  335 agcccgttagggc 347  Q
     ||||||||||||    
T  30436469 ggcccgttagggc 30436457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 35813537 - 35813426
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 334  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  35813537 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaagagggctttttagcccggcccgtaaaagccctt 35813439  T
Q  335 agcccgttagggc 347  Q
     ||||||||||||    
T  35813438 ggcccgttagggc 35813426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 234 - 347
Target Start/End: Original strand, 15243774 - 15243886
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    ||||||||||||||||||| |  ||||| ||||||| ||||||  |||||||| |||||||||| || |||||||||||||||||| |||  ||||||||    
T  15243774 atgggccggcccgaaagcctgagtaaaatgtagggcctgggccg-aataattgcagcccgaattctttcagggctttttagcccggaccgttaaagcccg 15243872  T
Q  334 gagcccgttagggc 347  Q
     |||||||| ||||    
T  15243873 tagcccgtttgggc 15243886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 244 - 360
Target Start/End: Original strand, 28968204 - 28968319
Alignment:
Q  244 ccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtta 343  Q
    |||||| |||| |||||| | ||||| ||||||  |||||| | |||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||    
T  28968204 ccgaaaacccgaataaaatgcagggcctgggccg-aataatagaagcctgaattttttcagggctttttagcccggcccaaaaaagcccgtagcccgtta 28968302  T
Q  344 gggccacgggcagcccg 360  Q
    ||||   ||||||||||    
T  28968303 gggctgagggcagcccg 28968319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 9201110 - 9201235
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    |||| |||||||||||| ||| ||||||||||||| ||||| || |||||||| |||| ||||| || ||| |||||||||||||| ||  |||||||||    
T  9201110 atggaccggcccgaaagtccgaataaaacgtagggtttggg-ccgaataattgcagcctgaattctttcagagctttttagcccggtccataaaagcccg 9201208  T
Q  334 gagcccgttagggccacgggcagcccg 360  Q
     | ||| || |||| | ||||||||||    
T  9201209 taaccctttcgggctaagggcagcccg 9201235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 236 - 332
Target Start/End: Complemental strand, 3654408 - 3654313
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 332  Q
    ||||||| || |||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||| ||||||| ||||||||    
T  3654408 gggccggtccaaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagctcggcccgtaaaagccc 3654313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 233 - 330
Target Start/End: Complemental strand, 29894570 - 29894474
Alignment:
Q  233 aatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagc 330  Q
    ||||||||||||| |||||||| |||||||||||| ||| || ||||| ||||| |||||||||   | ||||  |||||||||||| ||||||||||    
T  29894570 aatgggccggcccaaaagcccgaataaaacgtaggactt-ggacctaaaaattgcagcccgaataaattcaggattttttagcccggtccgaaaaagc 29894474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 264 - 362
Target Start/End: Complemental strand, 34347100 - 34347002
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtta-gggccacgggcagcccgca 362  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||| ||| |||||||||||  ||||||| ||||| |||| ||||||||    
T  34347100 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccgaccctaaaaagcccggtacccgttaggggccgcgggtagcccgca 34347002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 40027727 - 40027848
Alignment:
Q  225 gctgtcaaaatgggccggcccgaa-agcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccg 323  Q
    ||||||||||||||||||||||   |||||| |||||   |||||||||||||  ||  |||| ||||||||||||   ||||||||||||||||||||     
T  40027727 gctgtcaaaatgggccggcccgtttagcccgaataaata-tagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggccct 40027824  T
Q  324 aaaaagcccggagcccgttagggc 347  Q
     ||||||||||  |||||||||||    
T  40027825 taaaagcccggtacccgttagggc 40027848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 6142940 - 6142994
Alignment:
Q  279 aataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    |||||||| |||||| ||| ||||||||||||||||||||||||| |||| ||||    
T  6142940 aataattgcagcccggattcttccagggctttttagcccggcccgtaaaaacccg 6142994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 288 - 349
Target Start/End: Original strand, 957506 - 957567
Alignment:
Q  288 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggcca 349  Q
    ||||||||||||   |||||||||||||||||||| ||||||||||   |||||||||||||    
T  957506 agcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccgttagggcca 957567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 5927122 - 5927182
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  5927122 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 5927182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 6266315 - 6266375
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  6266315 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 6266375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 7433453 - 7433513
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  7433453 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggcacccgttagggc 7433513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 11202256 - 11202196
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  11202256 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 11202196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 22486860 - 22486816
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||    
T  22486860 gggctttttggcccggcccgataaagcccgaagcccgttagggcc 22486816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 24101822 - 24101762
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  24101822 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 24101762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 26098317 - 26098377
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  26098317 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 26098377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 31895009 - 31894949
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  31895009 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 31894949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 37819255 - 37819315
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  37819255 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 37819315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 38231802 - 38231742
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  38231802 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 38231742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 40027611 - 40027567
Alignment:
Q  303 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||||||||| |||||||||||  |||||||||||    
T  40027611 agggctttttagcccggccctaaaaagcccggtacccgttagggc 40027567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 346
Target Start/End: Complemental strand, 20823577 - 20823518
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttaggg 346  Q
    |||||||||||||   |||||||||||||||| ||| |||||||||||  ||||||||||    
T  20823577 gagcccgaattttagtagggctttttagcccgaccctaaaaagcccggtacccgttaggg 20823518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 38894759 - 38894820
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    |||||||||||||   |||||||||||||||| ||| ||||||||||   ||||||||||||    
T  38894759 gagcccgaattttaatagggctttttagcccgaccctaaaaagcccgctacccgttagggcc 38894820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 7161614 - 7161674
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||||||||| |||  ||||||||||  |||||||||||    
T  7161614 gagcccgaattttaatagggctttttagcccgtcccttaaaagcccggtacccgttagggc 7161674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 15041379 - 15041439
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  |||||||||   |||||||||||    
T  15041379 gagcccgaattttaatagggctttttagcccggcccttaaaagcccgatacccgttagggc 15041439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 21412488 - 21412548
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||||||||||||   ||||||||||  |||||||||||    
T  21412488 gagcccgaattttaatagggctttttagcccggccatcaaaagcccggtacccgttagggc 21412548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 21806980 - 21807040
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||||||||||||   ||||||||||  |||||||||||    
T  21806980 gagcccgaattttaatagggctttttagcccggccatcaaaagcccggtacccgttagggc 21807040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 29940168 - 29940108
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||| |||| ||||||||||   |||||||||||    
T  29940168 gagcccgaattttaatagggctttttagcccagccctaaaaagcccgctacccgttagggc 29940108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 38895250 - 38895294
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||| ||||||||||| |||||||| | ||||||||||||    
T  38895250 gggctttttcgcccggcccgataaagcccgaaacccgttagggcc 38895294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 40027090 - 40027046
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||| |||| |||||| |||||||| ||||||||||||||    
T  40027090 gggctttttggccctgcccgataaagcccgaagcccgttagggcc 40027046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 41644251 - 41644191
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||| ||||||||||||||||  ||||||||||  |||||||||||    
T  41644251 gagcccgaattttaataggcctttttagcccggcccttaaaagcccggtacccgttagggc 41644191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 41827628 - 41827572
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtta 343  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||    
T  41827628 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 41827572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 44679230 - 44679170
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||| ||  ||||||||||  |||||||||||    
T  44679230 gagcccgaattttaatagggctttttagcccggtccttaaaagcccggtacccgttagggc 44679170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 1e-48; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 225 - 367
Target Start/End: Complemental strand, 46237710 - 46237569
Alignment:
Q  225 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 324  Q
    |||||||||| |||||| || ||||||||| ||||||  ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  46237710 gctgtcaaaacgggccgacctgaaagcccgaataaaatatagggcttgggcc-taataattgcagcccgaatttttccagggctttttagctcggcccga 46237612  T
Q  325 aaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 367  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  46237611 aaaagcccggagcccgttcgggccacgggcagcccgcaaaaaa 46237569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 234 - 369
Target Start/End: Original strand, 32057557 - 32057691
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    |||||||||||||||| |||| |||||||| ||||| ||||||  || |||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  32057557 atgggccggcccgaaatcccgaataaaacgcagggcctgggccgaaa-aattggagcccgaatttttctagggctttttagcccggtccgtaaaagcccg 32057655  T
Q  334 gagcccgttagggccacgggcagcccgcaaaaaatt 369  Q
     | |||||| ||||| |||||||||||| |||||||    
T  32057656 taacccgttcgggcctcgggcagcccgccaaaaatt 32057691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 236 - 367
Target Start/End: Complemental strand, 48470532 - 48470402
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    |||||||||| |||||||| |||||| ||||||  ||||||   | ||| | ||||||||||||| |||| ||||||||||||||||||||||||||| |    
T  48470532 gggccggcccaaaagcccgaataaaatgtagggtctgggccgata-aatagcagcccgaattttttcaggactttttagcccggcccgaaaaagcccgaa 48470434  T
Q  336 gcccgttagggccacgggcagcccgcaaaaaa 367  Q
    ||||||| |||| | |||||||||||||||||    
T  48470433 gcccgttcgggctaagggcagcccgcaaaaaa 48470402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 33189029 - 33189139
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  33189029 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 33189127  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  33189128 gcccgttagggc 33189139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 12745580 - 12745691
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 334  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  12745580 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaatagggctttttagcccggcccgtaaaagccctt 12745678  T
Q  335 agcccgttagggc 347  Q
     ||||||||||||    
T  12745679 ggcccgttagggc 12745691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 12756569 - 12756680
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 334  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  12756569 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaatagggctttttagcccggcccgtaaaagccctt 12756667  T
Q  335 agcccgttagggc 347  Q
     ||||||||||||    
T  12756668 ggcccgttagggc 12756680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 236 - 367
Target Start/End: Original strand, 6501612 - 6501742
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    |||||| |||||||||||| |||||| | ||||| ||||||   | ||| | ||||| ||||||| ||| |||||||||||||||||||||||||||| |    
T  6501612 gggccgacccgaaagcccgaataaaatgcagggcctgggccgata-aatagaagcccaaattttttcagagctttttagcccggcccgaaaaagcccgaa 6501710  T
Q  336 gcccgttagggccacgggcagcccgcaaaaaa 367  Q
    ||||||| |||| | |||||||||| ||||||    
T  6501711 gcccgtttgggctaagggcagcccgaaaaaaa 6501742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 9660928 - 9660818
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    |||||||||||||| |||| |||||| ||||||||||||||  ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  9660928 gggccggcccgaaatcccgaataaaatgtagggcttgggccg-aataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 9660830  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  9660829 gcccgttagggc 9660818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 43781272 - 43781162
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    |||| |||||||||||||||| ||||||||       
T  43781272 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggttttttagcccggcccgtaaaagcccttg 43781174  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  43781173 gcccgttagggc 43781162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 45757343 - 45757233
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||  ||||||||       
T  45757343 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccataaaagcccttg 45757245  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  45757244 gcccgttagggc 45757233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 42763354 - 42763244
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || |||||||| |||||||| ||    ||||||||||||||||| ||| ||||||||       
T  42763354 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattgaagcccgaaattgaagagggctttttagcccggtccgtaaaagcccttg 42763256  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  42763255 gcccgttagggc 42763244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 236 - 367
Target Start/End: Complemental strand, 49229267 - 49229138
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||| ||||||||||||| |||||| | |||| |||||||   | ||| | |||||| |||||| ||||||||||||||||| |||||||||||||| |    
T  49229267 gggccagcccgaaagcccgaataaaatgcagggtttgggccgata-aatagcagcccggattttttcagggctttttagcccg-cccgaaaaagcccgaa 49229170  T
Q  336 gcccgttagggccacgggcagcccgcaaaaaa 367  Q
    ||||||| |||| | ||||||||| |||||||    
T  49229169 gcccgttcgggctaagggcagccctcaaaaaa 49229138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 288 - 367
Target Start/End: Original strand, 45565814 - 45565893
Alignment:
Q  288 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 367  Q
    |||||||| |||| ||||||||||||||||||||||||||| || | |||||||| |||| | |||||||||| ||||||    
T  45565814 agcccgaaatttttcagggctttttagcccggcccgaaaaaacctgaagcccgttcgggctaagggcagcccgtaaaaaa 45565893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 233 - 347
Target Start/End: Complemental strand, 31489609 - 31489496
Alignment:
Q  233 aatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 332  Q
    |||||||| ||||||||||||| ||||||| ||||||||||| ||||| ||||  |||||||||   | | |||||||||| ||||||||||||| ||||    
T  31489609 aatgggccagcccgaaagcccgaataaaacatagggcttggg-cctaaaaattacagcccgaataaattccgggctttttaacccggcccgaaaaggccc 31489511  T
Q  333 ggagcccgttagggc 347  Q
    |   |||||||||||    
T  31489510 gttacccgttagggc 31489496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 45039032 - 45039091
Alignment:
Q  288 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||| | |||||| ||||    
T  45039032 agcccgaatttttccagggttttttagcccgacccgaaaaagcccgcaacccgtttgggc 45039091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 258 - 348
Target Start/End: Complemental strand, 15699394 - 15699305
Alignment:
Q  258 aaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    |||| |||||||||||||| ||| ||| | |||||||||||   ||||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  15699394 aaaaggtagggcttgggcc-taaaaatggcagcccgaatttaaacagggctttttggcccggcccgataaagtccgaagcccgttagggcc 15699305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 225 - 366
Target Start/End: Original strand, 4220876 - 4221015
Alignment:
Q  225 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 324  Q
    |||| ||||||||||||| ||||||||||| | |||| | ||||| ||||||  || ||| |  |||| |||||||  |||||||||||||| ||||||     
T  4220876 gctgccaaaatgggccggtccgaaagcccgaaaaaaatgcagggcctgggccgaaa-aatggccgcccaaatttttttagggctttttagcctggcccg- 4220973  T
Q  325 aaaagcccggagcccgttagggccacgggcagcccgcaaaaa 366  Q
    ||||||||| |||||| | || | | ||||||||||||||||    
T  4220974 aaaagcccgcagcccgctcggactaagggcagcccgcaaaaa 4221015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 332
Target Start/End: Complemental strand, 47188665 - 47188574
Alignment:
Q  238 gccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 332  Q
    ||||||| ||||||||| |||||| |||||||||||||   ||||||||||||| ||| ||    ||| ||||||||||||||||| ||||||||    
T  47188665 gccggcctgaaagcccgaataaaatgtagggcttgggc---aataattggagcctgaaattgaagaggactttttagcccggcccgtaaaagccc 47188574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 1858853 - 1858793
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  1858853 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 1858793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 17331248 - 17331375
Alignment:
Q  220 ctagggctgtcaaaatgggccggcccgaa-agcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccg 318  Q
    |||| ||||||||||||||||||||  || |||||| |||||| ||||||| ||| ||   | ||| | ||| | | ||||| ||||||||||||| | |    
T  17331248 ctagagctgtcaaaatgggccggccgtaagagcccgaataaaatgtagggcctggaccgata-aatagcagctcaagttttttcagggctttttaggctg 17331346  T
Q  319 gcccgaaaaagcccggagcccgttagggc 347  Q
    | ||||||||||||| |||||||||||||    
T  17331347 gtccgaaaaagcccgaagcccgttagggc 17331375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 19406689 - 19406749
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  19406689 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 19406749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 40412064 - 40412020
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||    
T  40412064 gggctttttggcccggcccgataaagcccgaagcccgttagggcc 40412020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 41310606 - 41310546
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  41310606 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggcacccgttagggc 41310546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 44922234 - 44922294
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||||||||||||| ||||||||||   |||||||||||    
T  44922234 gagcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccgttagggc 44922294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 50512058 - 50511998
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||||||||||||| ||||||||||   |||||||||||    
T  50512058 gagcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccgttagggc 50511998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 5114949 - 5115008
Alignment:
Q  288 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  5114949 agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 5115008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 327
Target Start/End: Original strand, 30533392 - 30533486
Alignment:
Q  232 aaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaa 327  Q
    ||||||| ||||||||||||||| |||||| ||||| |||||| ||||| ||||  |||||| ||   |   ||||||||||||||||||||||||    
T  30533392 aaatgggtcggcccgaaagcccgaataaaatgtaggtcttggg-cctaaaaattacagcccggatagattatgggctttttagcccggcccgaaaa 30533486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 35985592 - 35985510
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||| |||  |||| || |||||||||   |||||||||||||||||||| |||||||||||  ||| |||||||    
T  35985592 tagggcttgggccttaaatattg-agtccgaattttaatagggctttttagcccggccctaaaaagcccggtacccattagggc 35985510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 348
Target Start/End: Original strand, 700524 - 700565
Alignment:
Q  307 ctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    |||||| ||||||||||| ||||||||||||| |||||||||    
T  700524 ctttttggcccggcccgataaagcccggagcctgttagggcc 700565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 20722232 - 20722292
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||||||||||||  |||||||| ||  |||||||||||    
T  20722232 gagcccgaattttaatagggctttttagcccggccttaaaaagcctggtacccgttagggc 20722292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 21088607 - 21088547
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||  |||| |||||||||||||||   ||||||||||  |||||||||||    
T  21088607 gagcccgaattttaacaggcctttttagcccggcctttaaaagcccggtacccgttagggc 21088547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 25422823 - 25422779
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  25422823 gggctttttggcccgacccgataaagcccgaagcccgttagggcc 25422779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 28199276 - 28199320
Alignment:
Q  303 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||    
T  28199276 agggctttttagcccggcccttaaaagcccggtacccgttagggc 28199320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 30723343 - 30723403
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||| |||||||||||||||  ||||||||||  |||||||||||    
T  30723343 gagcccgaattttaatagggttttttagcccggcccttaaaagcccggtacccgttagggc 30723403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 39995521 - 39995477
Alignment:
Q  303 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||    
T  39995521 agggctttttagcccggcccttaaaagcccggtacccgttagggc 39995477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 40412596 - 40412536
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||| |||||||| ||||||||||   |||||||||||    
T  40412596 gagcccgaattttaatagggctttttaacccggccctaaaaagcccgctacccgttagggc 40412536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 42102233 - 42102293
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  |||||| |||  |||||||||||    
T  42102233 gagcccgaattttaatagggctttttagcccggcccttaaaagctcggtacccgttagggc 42102293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 48812617 - 48812557
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||||||||| |||  ||||||||||  |||||||||||    
T  48812617 gagcccgaattttaatagggctttttagcccgacccttaaaagcccggtacccgttagggc 48812557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 48940828 - 48940895
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 332  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||| ||| |||||||||    
T  48940828 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccgaccctaaaaagccc 48940895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 5e-42; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 38976365 - 38976239
Alignment:
Q  220 ctagggctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccgg 319  Q
    |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||| | | |||||||||||||||    
T  38976365 ctagagctgtcaaaacgggccggcccgaaagcccgaataaaacgtagggcttgggcc-taataattgcagcccgaattttccaaaggctttttagcccgg 38976267  T
Q  320 cccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||| |||||||||||||    
T  38976266 cccgaaaaagcccgtagcccgttagggc 38976239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 227 - 369
Target Start/End: Complemental strand, 33908238 - 33908097
Alignment:
Q  227 tgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaa 326  Q
    |||||||||||||||| ||||||||||| |||||||  ||||| ||||||  || |||||||||||||||||||| ||||||||||||||||||||| ||    
T  33908238 tgtcaaaatgggccggtccgaaagcccgaataaaacacagggcctgggccgaaa-aattggagcccgaatttttctagggctttttagcccggcccgtaa 33908140  T
Q  327 aagcccggagcccgttagggccacgggcagcccgcaaaaaatt 369  Q
    ||||||| | |||||| |||| ||||||||||||| |||||||    
T  33908139 aagcccgtaacccgttcgggctacgggcagcccgccaaaaatt 33908097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 9996232 - 9996353
Alignment:
Q  225 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 324  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    |||||||||||||||||||||     
T  9996232 gctgtcaaaatgggccgggccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgt 9996330  T
Q  325 aaaagcccggagcccgttagggc 347  Q
    ||||||||   ||||||||||||    
T  9996331 aaaagcccttggcccgttagggc 9996353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 6955892 - 6955782
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  6955892 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 6955794  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  6955793 gcccgttagggc 6955782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 35038853 - 35038743
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  35038853 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 35038755  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  35038754 gcccgttagggc 35038743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 237 - 340
Target Start/End: Complemental strand, 37206138 - 37206036
Alignment:
Q  237 ggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggag 336  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| ||||| | ||||| |||||  ||||||||||||| ||||||| ||||||||| ||    
T  37206138 ggccggcccgaaagcccgaataaaacgtagggcttggg-cctaaaaattgcaacccgattttttttagggctttttagctcggcccgtaaaagcccgtag 37206040  T
Q  337 cccg 340  Q
    ||||    
T  37206039 cccg 37206036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 38356126 - 38356016
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  38356126 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 38356028  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  38356027 gcccgttagggc 38356016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 220 - 347
Target Start/End: Complemental strand, 1398478 - 1398351
Alignment:
Q  220 ctagggctgtcaaaatgggccggcccgaaagcccg-cataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccg 318  Q
    |||| ||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||| ||| | |||||||||||    |||||||||| |||||    
T  1398478 ctagagctgtcaaaatgggccggcccgaaagcccgaaaaaaaacgtagggcttggg-cctaaaaatggcagcccgaatttaaatagggctttttggcccg 1398380  T
Q  319 gcccgaaaaagcccggagcccgttagggc 347  Q
    ||||| ||||  ||| |||||||||||||    
T  1398379 gcccgtaaaaatccgaagcccgttagggc 1398351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 6238185 - 6238296
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 334  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  6238185 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaagagggctttttagcccggcccgtaaaagccctt 6238283  T
Q  335 agcccgttagggc 347  Q
     ||||||||||||    
T  6238284 ggcccgttagggc 6238296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 6899895 - 6900006
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 334  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  6899895 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaagagggctttttagcccggcccgtaaaagccctt 6899993  T
Q  335 agcccgttagggc 347  Q
     ||||||||||||    
T  6899994 ggcccgttagggc 6900006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 35838110 - 35838221
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 334  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  35838110 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaatagggctttttagcccggcccgtaaaagccctt 35838208  T
Q  335 agcccgttagggc 347  Q
     ||||||||||||    
T  35838209 ggcccgttagggc 35838221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 10642146 - 10642036
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| |||||| |       
T  10642146 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagctcttg 10642048  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  10642047 gcccgttagggc 10642036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 21731717 - 21731827
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||| ||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  21731717 gggccgggccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 21731815  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  21731816 gcccgttagggc 21731827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 257 - 347
Target Start/End: Complemental strand, 4975876 - 4975787
Alignment:
Q  257 taaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||| ||||||| ||||||||| ||| |||||||||| | | ||||||||||||| |||||||||||||||| ||||||||||    
T  4975876 taaaacgtagggtttgggcc-taataattgtagctcgaatttttctaagactttttagcccggtccgaaaaagcccggagtccgttagggc 4975787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 227 - 333
Target Start/End: Original strand, 31230247 - 31230352
Alignment:
Q  227 tgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaa 326  Q
    ||||||||||| |||| | ||||||||| |||||||| ||||| ||||||  || |  ||||||||||||||||||||||||||||||||||||||| ||    
T  31230247 tgtcaaaatggaccgggctgaaagcccgaataaaacgcagggcctgggccgaaa-agctggagcccgaatttttccagggctttttagcccggcccgtaa 31230345  T
Q  327 aagcccg 333  Q
    || ||||    
T  31230346 aatcccg 31230352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 4700031 - 4699920
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 334  Q
    ||||||||||||||||||| |||||| |||||| |||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  4700031 gggccggcccgaaagcccgaataaaatgtagggtttgggccg-aataattggagcccgaaatttgaatagggctttttagcccggcccgtaaaagccctt 4699933  T
Q  335 agcccgttagggc 347  Q
     ||||||||||||    
T  4699932 ggcccgttagggc 4699920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 24477286 - 24477397
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 334  Q
    ||||||||||||||||||| |||||| |||||||||| |||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  24477286 gggccggcccgaaagcccgaataaaatgtagggcttgagccg-aataattggagcccgaaatttgaagagggctttttagcccggcccgtaaaagccctt 24477384  T
Q  335 agcccgttagggc 347  Q
     ||||||||||||    
T  24477385 ggcccgttagggc 24477397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 289 - 364
Target Start/End: Complemental strand, 3436769 - 3436694
Alignment:
Q  289 gcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggccacgggcagcccgcaaa 364  Q
    ||||||||||||  |||||||||||||||||| |||||||||||| |||||||| |||| | ||||||||||||||    
T  3436769 gcccgaatttttttagggctttttagcccggctcgaaaaagcccgaagcccgttcgggctaagggcagcccgcaaa 3436694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 282 - 347
Target Start/End: Original strand, 3296166 - 3296231
Alignment:
Q  282 aattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||| |||||||||| || ||||||||||||||||||||| |||||||||||||| |||||||||    
T  3296166 aattgcagcccgaattgtttcagggctttttagcccggcccaaaaaagcccggagctcgttagggc 3296231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 333
Target Start/End: Complemental strand, 38986685 - 38986610
Alignment:
Q  257 taaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    |||||| |||||||||||| | || ||||  |||||||||||||| |||||||||||||||||||||||||||||||    
T  38986685 taaaacttagggcttgggctcaaa-aatttcagcccgaatttttctagggctttttagcccggcccgaaaaagcccg 38986610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 20338609 - 20338499
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||| ||| |||||| ||||||| | ||||   | ||| | ||||||||||||| ||||| |||||||||||| ||||||||||||| |    
T  20338609 gggccggcccgaaagtccgaataaaatgtagggcctaggccgata-aatagcagcccgaattttttcagggatttttagcccggtccgaaaaagcccgaa 20338511  T
Q  336 gcccgttagggc 347  Q
    || |||||||||    
T  20338510 gctcgttagggc 20338499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 42860416 - 42860306
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||| ||||| || ||||||||||||||||| ||    |||| |||||||||| ||||| ||||||||       
T  42860416 gggccggcccgaaagcccgaataaaatgtagggtttggg-ccgaataattggagcccgaaattgaagagggttttttagcccagcccgtaaaagcccttg 42860318  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  42860317 gcccgttagggc 42860306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 219 - 333
Target Start/End: Original strand, 36866102 - 36866215
Alignment:
Q  219 actagggctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccg 318  Q
    ||||| |||||||||| ||||||   ||||||| || ||||||||||| | ||||| |  ||||| || ||||||||||||| |||||||||||| ||||    
T  36866102 actagagctgtcaaaacgggccgaatcgaaagctcgaataaaacgtagagtttgggtcg-aataagtgcagcccgaattttttcagggctttttatcccg 36866200  T
Q  319 gcccgaaaaagcccg 333  Q
     |||| |||||||||    
T  36866201 acccgtaaaagcccg 36866215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 250 - 347
Target Start/End: Original strand, 36016288 - 36016384
Alignment:
Q  250 gcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||| |||||| ||||||||||||||  |||||||||||||| || ||    ||||||||||||||||||||| ||||||||   ||||||||||||    
T  36016288 gcccgaataaaatgtagggcttgggccg-aataattggagcccaaaattgaagagggctttttagcccggcccgtaaaagcccttggcccgttagggc 36016384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 244 - 367
Target Start/End: Original strand, 17085407 - 17085529
Alignment:
Q  244 ccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtta 343  Q
    ||||||||||| |||||| ||||||  ||||||  |||||||| |||||||||||| | |||  ||||||| ||  ||| |||||||||| | ||||||     
T  17085407 ccgaaagcccgaataaaatgtagggtctgggccg-aataattgaagcccgaattttccaaggtttttttagtccaacccaaaaaagcccgcaacccgttc 17085505  T
Q  344 gggccacgggcagcccgcaaaaaa 367  Q
    |||| ||||||||| | |||||||    
T  17085506 gggctacgggcagctcacaaaaaa 17085529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 264 - 347
Target Start/End: Original strand, 24566246 - 24566328
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||||| |||||| ||||  |||||||||||    
T  24566246 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggccctaaaaagtccggtacccgttagggc 24566328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 264 - 347
Target Start/End: Original strand, 24607282 - 24607364
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||||| |||||| ||||  |||||||||||    
T  24607282 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggccctaaaaagtccggtacccgttagggc 24607364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 26264481 - 26264399
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||  ||| |||| ||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  26264481 tagggcttgggcctaaattattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 26264399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 17320389 - 17320470
Alignment:
Q  265 agggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||| |||  |||| |||||| |||||   |||||||||||||||||||| |||||||||||  |||||||||||    
T  17320389 agggcttgggccttaaatattg-agcccggattttaatagggctttttagcccggccctaaaaagcccggtacccgttagggc 17320470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 234 - 298
Target Start/End: Original strand, 74980 - 75043
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaattt 298  Q
    ||||| ||| ||||||||||| ||||||||||||||||||| ||||| ||||| |||||| ||||    
T  74980 atgggtcggtccgaaagcccgaataaaacgtagggcttggg-cctaaaaattgcagcccgtattt 75043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 20122748 - 20122808
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  20122748 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 20122808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 28759439 - 28759379
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  28759439 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 28759379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 39479386 - 39479446
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   | |||||||||||||||||| |||||||||||  |||||||||||    
T  39479386 gagcccgaattttaatatggctttttagcccggccctaaaaagcccggtacccgttagggc 39479446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 347
Target Start/End: Complemental strand, 40917956 - 40917897
Alignment:
Q  288 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||| ||| ||||||||||| |||| |||||||| || ||| |||||||||    
T  40917956 agcccgaattttttcagagctttttagcctggcctgaaaaagctcgaagctcgttagggc 40917897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 17016523 - 17016569
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    |||||||||||||   |||||||||||||||||||| ||||||||||    
T  17016523 gagcccgaattttaatagggctttttagcccggccctaaaaagcccg 17016569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 347
Target Start/End: Original strand, 1845459 - 1845532
Alignment:
Q  274 gccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||| ||||||||||| ||||| ||    ||||||||||||||||||||| ||||||||   ||||||||||||    
T  1845459 gcccgaataattggagtccgaaattgaagagggctttttagcccggcccgtaaaagcccttggcccgttagggc 1845532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 17320977 - 17321022
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttagggcca 349  Q
    ||||||||| ||||||||||| |||||| | |||||||||||||||    
T  17320977 gggctttttggcccggcccgataaagcctgaagcccgttagggcca 17321022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 349
Target Start/End: Complemental strand, 21162763 - 21162679
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggcca 349  Q
    ||||||||||||| |||  |||| |||||||||||    ||||||||||||||||| || ||||||||||   |||||||||||||    
T  21162763 tagggcttgggccttaaatattg-agcccgaatttcaatagggctttttagcccggacctaaaaagcccgctacccgttagggcca 21162679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 341
Target Start/End: Complemental strand, 37205309 - 37205272
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgt 341  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  37205309 gggctttttagcccggccctaaaaagcccgaagcccgt 37205272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 2466375 - 2466319
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtta 343  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||    
T  2466375 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 2466319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 344
Target Start/End: Complemental strand, 7344283 - 7344243
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttag 344  Q
    ||||||||| ||||||||||| |||||||| ||||||||||    
T  7344283 gggctttttggcccggcccgataaagcccgaagcccgttag 7344243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 8320564 - 8320504
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||||||||||||| ||||||| |||  | |||||||||    
T  8320564 gagcccgaattttaatagggctttttagcccggccctaaaaagctcggtactcgttagggc 8320504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 19647010 - 19646966
Alignment:
Q  303 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||||||||| ||||||||||   |||||||||||    
T  19647010 agggctttttagcccggccctaaaaagcccgctacccgttagggc 19646966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 2e-38; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 234 - 347
Target Start/End: Complemental strand, 15614261 - 15614149
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    ||||||||||||||||||||| ||||||  ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  15614261 atgggccggcccgaaagcccgaataaaatatagggcttgggcc-taataattgcagcccgaatttttccagggctttttagcccgccccgaaaaagcccg 15614163  T
Q  334 gagcccgttagggc 347  Q
    ||||| ||||||||    
T  15614162 gagcctgttagggc 15614149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 225 - 361
Target Start/End: Original strand, 5271064 - 5271199
Alignment:
Q  225 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 324  Q
    |||||||||| ||||||||||||||||||| |||||| | ||||||||||||  || |||||||||||||||||||||||| |||||||||||||||||     
T  5271064 gctgtcaaaacgggccggcccgaaagcccgaataaaatgcagggcttgggccgaaa-aattggagcccgaatttttccaggactttttagcccggcccgc 5271162  T
Q  325 aaaagcccggagcccgttagggccacgggcagcccgc 361  Q
    |||| |||| | ||||||||||| |||||||||||||    
T  5271163 aaaaccccgtaacccgttagggctacgggcagcccgc 5271199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 237 - 367
Target Start/End: Original strand, 9470828 - 9470957
Alignment:
Q  237 ggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggag 336  Q
    |||||||||||||||||| |||||| |||||| |||||||   | ||| | ||||||||||||| ||||||||||||||||||||||||||| |||| ||    
T  9470828 ggccggcccgaaagcccgaataaaatgtagggtttgggccgata-aatagcagcccgaattttttcagggctttttagcccggcccgaaaaatcccgaag 9470926  T
Q  337 cccgttagggccacgggcagcccgcaaaaaa 367  Q
    | |||| |||| | |||||||||||||||||    
T  9470927 cacgttcgggctaagggcagcccgcaaaaaa 9470957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 279 - 367
Target Start/End: Complemental strand, 20922828 - 20922740
Alignment:
Q  279 aataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 367  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||  ||| ||| ||||||||| |||||    
T  20922828 aataattgcagcccgaattttttcagggctttttagcccggcccgaaaaagcccgtagcccgttcaggctacgagcagcccgccaaaaa 20922740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 15560676 - 15560566
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  15560676 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 15560578  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  15560577 gcccgttagggc 15560566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 25096307 - 25096417
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  25096307 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 25096405  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  25096406 gcccgttagggc 25096417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 225 - 340
Target Start/End: Complemental strand, 38838159 - 38838045
Alignment:
Q  225 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 324  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| ||||| || ||||||||||  | ||||| |||||||| |||      
T  38838159 gctgtcaaaacgggccggcccgaaagcccgaataaaacgtagggcttggg-cctaaaaattgcagtccgaatttttttaaggcttgttagcccgacccat 38838061  T
Q  325 aaaagcccggagcccg 340  Q
    ||||||||| ||||||    
T  38838060 aaaagcccgtagcccg 38838045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 236 - 346
Target Start/End: Original strand, 21747420 - 21747529
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  21747420 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 21747518  T
Q  336 gcccgttaggg 346  Q
    |||||||||||    
T  21747519 gcccgttaggg 21747529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 29201516 - 29201406
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||| ||||||||||| |||||| ||||||||||||||  ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  29201516 gggccgggccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 29201418  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  29201417 gcccgttagggc 29201406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 42730824 - 42730715
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||| ||||||||||| |||||| | ||||||||||||  |||||| | ||||||||||||| ||||||||||||||||| |||| ||||||||| |    
T  42730824 gggccgggccgaaagcccgaataaaatgcagggcttgggccg-aataatagcagcccgaattttttcagggctttttagcccgacccg-aaaagcccgta 42730727  T
Q  336 gcccgttagggc 347  Q
    ||| ||||||||    
T  42730726 gcctgttagggc 42730715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 40000896 - 40000787
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 335  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||| ||||||| ||    ||||||||||||||||||||| ||||||||       
T  40000896 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattgg-gcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 40000799  T
Q  336 gcccgttagggc 347  Q
    ||||||||||||    
T  40000798 gcccgttagggc 40000787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 237 - 333
Target Start/End: Original strand, 17920791 - 17920886
Alignment:
Q  237 ggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    |||||||||||||||| | |||||| |||||| |||||||   | ||| | |||| ||||||||  |||||||||||||||||||||||||||||||    
T  17920791 ggccggcccgaaagcctgaataaaatgtagggtttgggccgata-aatagcagcctgaatttttttagggctttttagcccggcccgaaaaagcccg 17920886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 234 - 304
Target Start/End: Complemental strand, 17071325 - 17071256
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccag 304  Q
    ||||||||||||||||||||| |||||| |||||| ||||| | ||||||||  |||||||||||||||||    
T  17071325 atgggccggcccgaaagcccgaataaaatgtagggtttggg-cttaataatttcagcccgaatttttccag 17071256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 245 - 347
Target Start/End: Complemental strand, 40861136 - 40861035
Alignment:
Q  245 cgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttag 344  Q
    |||||||||| |||||| |||||||||| |||  ||||||||||||||||| ||    |||||||||||||| |||||| ||||||||   |||||||||    
T  40861136 cgaaagcccgaataaaatgtagggcttgagccg-aataattggagcccgaaattgaagagggctttttagcctggcccgtaaaagcccttggcccgttag 40861038  T
Q  345 ggc 347  Q
    |||    
T  40861037 ggc 40861035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 17088323 - 17088255
Alignment:
Q  235 tgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccag 304  Q
    |||||||||||||||||||| |||||| |||||| ||||| | ||||||||  |||||||||||||||||    
T  17088323 tgggccggcccgaaagcccgaataaaatgtagggtttggg-cttaataattttagcccgaatttttccag 17088255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 17077395 - 17077328
Alignment:
Q  236 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccag 304  Q
    ||||||||||||||||||| |||||| |||||| ||||| | ||||||||  |||||||||||||||||    
T  17077395 gggccggcccgaaagcccgaataaaatgtagggtttggg-cttaataatttcagcccgaatttttccag 17077328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 10822369 - 10822287
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||||| ||||| |||||  |||||||||||    
T  10822369 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggccctaaaaaacccggtacccgttagggc 10822287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 31618185 - 31618103
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||| | |||||||||||  |||||||||||    
T  31618185 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggctctaaaaagcccggtacccgttagggc 31618103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 234 - 347
Target Start/End: Original strand, 4564919 - 4565030
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    |||| |||||| ||| || || |||||| |||||||||| ||| ||| ||||| |||||||| |||||||| | |||||| |||  ||||||||||||||    
T  4564919 atggaccggcctgaacgctcgaataaaatgtagggcttgtgcc-taaaaattgcagcccgaaattttccagag-tttttaacccaacccgaaaaagcccg 4565016  T
Q  334 gagcccgttagggc 347  Q
     ||||||| |||||    
T  4565017 tagcccgtcagggc 4565030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 13247770 - 13247830
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  13247770 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 13247830  T

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Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 27495925 - 27495985
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  27495925 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 27495985  T

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Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 30801275 - 30801215
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  30801275 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 30801215  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 35439605 - 35439545
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  35439605 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 35439545  T

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Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 371
Target Start/End: Original strand, 4565034 - 4565068
Alignment:
Q  337 cccgttagggccacgggcagcccgcaaaaaattaa 371  Q
    |||||| ||||||||||||||||||||||||||||    
T  4565034 cccgtttgggccacgggcagcccgcaaaaaattaa 4565068  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 1002558 - 1002514
Alignment:
Q  303 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||    
T  1002558 agggctttttagcccggcccataaaagcccggtacccgttagggc 1002514  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 1346347 - 1346287
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||| ||||  |||||||||||    
T  1346347 gagcccgaattttaatagggctttttagcccggcccttaaaagtccggtacccgttagggc 1346287  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 2650157 - 2650097
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||| ||  ||||||||||  |||||||||||    
T  2650157 gagcccgaattttaatagggctttttagcccggtccttaaaagcccggtacccgttagggc 2650097  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 344
Target Start/End: Complemental strand, 10821781 - 10821741
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttag 344  Q
    ||||||||| ||||||||||| |||||||| ||||||||||    
T  10821781 gggctttttggcccggcccgataaagcccgaagcccgttag 10821741  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 13312112 - 13312156
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||| ||||||||||| |||||| | ||||||||||||||    
T  13312112 gggctttttggcccggcccgataaagcctgaagcccgttagggcc 13312156  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 27552032 - 27552076
Alignment:
Q  303 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||||||||| |||||||||||  ||| |||||||    
T  27552032 agggctttttagcccggccctaaaaagcccggtacccattagggc 27552076  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 27554001 - 27554045
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||| ||||||||||| ||||| || ||||||||||||||    
T  27554001 gggctttttggcccggcccgataaagcacgaagcccgttagggcc 27554045  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 28222955 - 28223015
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||||||||||| |  ||||||||||  |||||||||||    
T  28222955 gagcccgaattttaatagggctttttagcccggctcttaaaagcccggtacccgttagggc 28223015  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 30556199 - 30556243
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||| |||||| |||| |||||||| ||||||||||||||    
T  30556199 gggctttttggcccggtccgataaagcccgaagcccgttagggcc 30556243  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 34314322 - 34314366
Alignment:
Q  304 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 348  Q
    ||||||||| ||||||||||| |||||| | ||||||||||||||    
T  34314322 gggctttttggcccggcccgataaagcctgaagcccgttagggcc 34314366  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 36240821 - 36240761
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||||||||| |||  ||||||||||  |||||||||||    
T  36240821 gagcccgaattttaatagggctttttagcccgacccttaaaagcccggtacccgttagggc 36240761  T

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Target: scaffold0295 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 244 - 371
Target Start/End: Original strand, 6177 - 6303
Alignment:
Q  244 ccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtta 343  Q
    |||| |||||| |||||| ||||||| |||||   |||||||| || |||||||||| |||||||||||||||||||||| ||||| ||| | |||||||    
T  6177 ccgatagcccgaataaaatgtagggcctgggcgg-aataattgcagtccgaattttttcagggctttttagcccggcccgcaaaagtccgtaacccgtta 6275  T
Q  344 gggccacgggcagcccgcaaaaaattaa 371  Q
    |||| |||||||||| | || |||||||    
T  6276 gggctacgggcagcctgaaataaattaa 6303  T

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Target: scaffold0219 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 246 - 347
Target Start/End: Complemental strand, 16730 - 16630
Alignment:
Q  246 gaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagg 345  Q
    ||||||||| |||||| ||||||||||||||  |||||||| |||||||| ||    ||||||||||||||||||||| ||||||||   ||||||||||    
T  16730 gaaagcccgaataaaatgtagggcttgggccg-aataattgtagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttggcccgttagg 16632  T
Q  346 gc 347  Q
    ||    
T  16631 gc 16630  T

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Target: scaffold1449 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold1449
Description:

Target: scaffold1449; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 234 - 304
Target Start/End: Complemental strand, 1650 - 1581
Alignment:
Q  234 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccag 304  Q
    ||||||||||||||||||||| |||||| |||||| ||||| | ||||||||  |||||||||||||||||    
T  1650 atgggccggcccgaaagcccgaataaaatgtagggtttggg-cttaataattttagcccgaatttttccag 1581  T

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Target: scaffold0664 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 7852 - 7792
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  7852 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 7792  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 103180 - 103134
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    |||||||||||||   |||||||||||||||||||| ||||||||||    
T  103180 gagcccgaattttaatagggctttttagcccggccctaaaaagcccg 103134  T

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Target: scaffold0661 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 1657 - 1589
Alignment:
Q  264 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 333  Q
    ||||||||||||| |||  |||| ||||||||||||    ||||||||||||||||||| ||||||||||    
T  1657 tagggcttgggccttaaatattg-agcccgaattttaattgggctttttagcccggccctaaaaagcccg 1589  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 27666 - 27726
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||| |||||||||  ||||||||||  |||||||||||    
T  27666 gagcccgaattttaatagggctttttcgcccggcccttaaaagcccggtacccgttagggc 27726  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 56273 - 56333
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   ||||||||||||||||||||  |||| |||||  |||||||||||    
T  56273 gagcccgaattttaatagggctttttagcccggcccttaaaatcccggtacccgttagggc 56333  T

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Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 231740 - 231680
Alignment:
Q  287 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 347  Q
    |||||||||||||   |||||||||||||||||||| |||||||| |   |||||||||||    
T  231740 gagcccgaattttaatagggctttttagcccggccctaaaaagcctgctacccgttagggc 231680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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