View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9381_low_24 (Length: 360)

Name: NF9381_low_24
Description: NF9381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9381_low_24
NF9381_low_24
[»] chr1 (41 HSPs)
chr1 (158-343)||(193864-194048)
chr1 (158-299)||(23440631-23440773)
chr1 (158-353)||(48972274-48972479)
chr1 (150-353)||(6076697-6076909)
chr1 (158-353)||(16270221-16270427)
chr1 (182-353)||(16270978-16271158)
chr1 (158-299)||(9948009-9948152)
chr1 (145-294)||(47334200-47334350)
chr1 (180-307)||(12925909-12926036)
chr1 (158-299)||(51974451-51974594)
chr1 (183-353)||(51975056-51975236)
chr1 (160-275)||(9948803-9948919)
chr1 (169-299)||(31390718-31390846)
chr1 (158-353)||(38930326-38930531)
chr1 (169-299)||(43737754-43737886)
chr1 (180-353)||(17050489-17050659)
chr1 (169-353)||(38931075-38931270)
chr1 (158-274)||(23440781-23440899)
chr1 (158-274)||(43737894-43738012)
chr1 (151-291)||(6075981-6076119)
chr1 (205-353)||(48971766-48971924)
chr1 (174-289)||(50826992-50827109)
chr1 (188-342)||(20794333-20794484)
chr1 (145-243)||(47334849-47334947)
chr1 (174-238)||(27888701-27888765)
chr1 (229-283)||(194610-194664)
chr1 (180-258)||(46133729-46133807)
chr1 (151-249)||(49420898-49420996)
chr1 (205-254)||(37725440-37725489)
chr1 (180-245)||(40649514-40649579)
chr1 (205-254)||(51248459-51248508)
chr1 (151-191)||(31787485-31787525)
chr1 (145-192)||(42383721-42383768)
chr1 (205-260)||(50267623-50267678)
chr1 (205-274)||(8560217-8560286)
chr1 (205-254)||(27797712-27797761)
chr1 (205-254)||(41563240-41563289)
chr1 (205-254)||(41563768-41563817)
chr1 (205-254)||(42838998-42839047)
chr1 (205-254)||(49533804-49533853)
chr1 (169-297)||(50950170-50950297)
[»] chr2 (24 HSPs)
chr2 (158-343)||(4479552-4479736)
chr2 (19-140)||(31543159-31543280)
chr2 (158-353)||(21471031-21471236)
chr2 (158-353)||(21471783-21471988)
chr2 (158-356)||(37548012-37548222)
chr2 (174-299)||(38834417-38834544)
chr2 (158-257)||(14573275-14573374)
chr2 (158-274)||(38834552-38834670)
chr2 (229-283)||(4478936-4478990)
chr2 (158-274)||(13134332-13134450)
chr2 (145-254)||(36390958-36391067)
chr2 (158-260)||(14573930-14574033)
chr2 (151-191)||(4975703-4975743)
chr2 (151-258)||(36391606-36391713)
chr2 (205-271)||(9224327-9224393)
chr2 (205-254)||(11256177-11256226)
chr2 (205-254)||(17918661-17918710)
chr2 (145-178)||(24383077-24383110)
chr2 (205-254)||(28223849-28223898)
chr2 (205-254)||(39477301-39477350)
chr2 (151-192)||(41519925-41519966)
chr2 (151-191)||(4993611-4993651)
chr2 (151-279)||(23875247-23875374)
chr2 (160-236)||(37545692-37545768)
[»] chr7 (36 HSPs)
chr7 (158-343)||(41194527-41194710)
chr7 (160-353)||(38071914-38072117)
chr7 (158-353)||(668193-668398)
chr7 (158-299)||(17145636-17145780)
chr7 (169-299)||(37864198-37864330)
chr7 (169-353)||(668932-669126)
chr7 (158-291)||(7677710-7677843)
chr7 (160-291)||(4261221-4261353)
chr7 (174-353)||(7677447-7677636)
chr7 (160-300)||(4261486-4261628)
chr7 (158-257)||(38779498-38779597)
chr7 (180-291)||(38072191-38072303)
chr7 (205-353)||(32859294-32859439)
chr7 (158-260)||(38778868-38778971)
chr7 (158-274)||(17145788-17145906)
chr7 (229-283)||(41195275-41195329)
chr7 (145-261)||(40257581-40257697)
chr7 (145-261)||(42607082-42607198)
chr7 (183-289)||(33323807-33323915)
chr7 (151-279)||(36845116-36845243)
chr7 (205-255)||(24321487-24321537)
chr7 (205-254)||(27855626-27855675)
chr7 (151-235)||(40257759-40257843)
chr7 (145-188)||(9122651-9122694)
chr7 (158-221)||(37468976-37469039)
chr7 (205-255)||(24322288-24322338)
chr7 (205-259)||(32499843-32499897)
chr7 (205-254)||(4895058-4895107)
chr7 (145-186)||(6730163-6730204)
chr7 (205-254)||(24044019-24044068)
chr7 (205-254)||(32499310-32499359)
chr7 (205-254)||(34853972-34854021)
chr7 (205-254)||(36682896-36682945)
chr7 (205-254)||(46815038-46815087)
chr7 (205-254)||(47814032-47814081)
chr7 (205-254)||(47814611-47814660)
[»] chr3 (46 HSPs)
chr3 (183-353)||(45500512-45500683)
chr3 (158-299)||(19132703-19132846)
chr3 (169-353)||(38923494-38923688)
chr3 (158-353)||(36750267-36750471)
chr3 (158-353)||(38922757-38922962)
chr3 (158-299)||(32490086-32490229)
chr3 (180-353)||(3971028-3971211)
chr3 (180-353)||(45242816-45242999)
chr3 (182-353)||(45242104-45242285)
chr3 (180-353)||(3998670-3998853)
chr3 (188-353)||(44686298-44686473)
chr3 (184-353)||(52491926-52492105)
chr3 (158-274)||(19132577-19132695)
chr3 (158-291)||(36750059-36750193)
chr3 (160-353)||(41756261-41756464)
chr3 (180-291)||(52492179-52492291)
chr3 (183-343)||(3971744-3971911)
chr3 (183-343)||(3997967-3998134)
chr3 (158-299)||(41755513-41755656)
chr3 (180-295)||(44687058-44687175)
chr3 (205-254)||(8427277-8427326)
chr3 (180-274)||(32489982-32490078)
chr3 (151-279)||(49161722-49161849)
chr3 (180-274)||(8440127-8440221)
chr3 (145-191)||(49160988-49161034)
chr3 (205-254)||(47737649-47737698)
chr3 (205-260)||(25025235-25025290)
chr3 (158-261)||(38337408-38337511)
chr3 (205-254)||(3944956-3945005)
chr3 (205-254)||(8427719-8427768)
chr3 (145-254)||(8652811-8652920)
chr3 (205-254)||(19555899-19555948)
chr3 (205-254)||(23584859-23584908)
chr3 (205-254)||(23599682-23599731)
chr3 (205-254)||(29342402-29342451)
chr3 (205-254)||(29342969-29343018)
chr3 (205-254)||(37374876-37374925)
chr3 (205-254)||(38575082-38575131)
chr3 (205-254)||(40887917-40887966)
chr3 (205-254)||(41875592-41875641)
chr3 (205-254)||(42356297-42356346)
chr3 (205-254)||(44868594-44868643)
chr3 (205-254)||(49752334-49752383)
chr3 (205-254)||(50687684-50687733)
chr3 (205-254)||(55281896-55281945)
chr3 (202-258)||(46186967-46187023)
[»] chr5 (26 HSPs)
chr5 (158-353)||(33002645-33002850)
chr5 (158-299)||(687239-687382)
chr5 (158-299)||(15183908-15184051)
chr5 (188-353)||(15183133-15183308)
chr5 (158-291)||(33001946-33002079)
chr5 (174-299)||(686446-686573)
chr5 (169-274)||(12190075-12190181)
chr5 (158-289)||(8204134-8204267)
chr5 (158-299)||(8040209-8040352)
chr5 (169-274)||(36626546-36626653)
chr5 (158-274)||(8040360-8040478)
chr5 (145-191)||(4555390-4555436)
chr5 (145-184)||(6803949-6803988)
chr5 (145-192)||(16689594-16689641)
chr5 (145-191)||(9142048-9142094)
chr5 (205-292)||(42518813-42518899)
chr5 (145-236)||(17767547-17767638)
chr5 (205-255)||(33283226-33283276)
chr5 (205-254)||(3739639-3739688)
chr5 (205-254)||(33430103-33430152)
chr5 (174-235)||(33685775-33685836)
chr5 (205-254)||(42408541-42408590)
chr5 (245-297)||(6912217-6912268)
chr5 (145-185)||(12201378-12201418)
chr5 (151-191)||(26712389-26712429)
chr5 (151-191)||(26982127-26982167)
[»] chr4 (49 HSPs)
chr4 (158-353)||(26611112-26611317)
chr4 (145-298)||(36451320-36451474)
chr4 (158-353)||(10424137-10424342)
chr4 (158-353)||(29651161-29651366)
chr4 (158-299)||(11417701-11417844)
chr4 (158-353)||(36865547-36865751)
chr4 (169-353)||(26610370-26610565)
chr4 (169-353)||(31836288-31836483)
chr4 (160-353)||(10424888-10425091)
chr4 (169-353)||(21165472-21165666)
chr4 (169-299)||(21166266-21166398)
chr4 (169-299)||(31835173-31835305)
chr4 (161-274)||(9939287-9939402)
chr4 (169-349)||(45230390-45230580)
chr4 (158-274)||(11417852-11417971)
chr4 (145-294)||(25970107-25970253)
chr4 (188-353)||(29650459-29650633)
chr4 (169-299)||(38143628-38143760)
chr4 (183-299)||(9939161-9939279)
chr4 (180-353)||(39522411-39522594)
chr4 (158-299)||(36864831-36864972)
chr4 (169-299)||(45235851-45235983)
chr4 (188-274)||(38143532-38143620)
chr4 (169-274)||(38694727-38694834)
chr4 (158-299)||(38694842-38694988)
chr4 (158-291)||(39523172-39523305)
chr4 (188-299)||(17648036-17648148)
chr4 (145-285)||(36450729-36450871)
chr4 (145-287)||(25970706-25970850)
chr4 (145-250)||(231991-232096)
chr4 (198-268)||(11806145-11806215)
chr4 (145-297)||(23383311-23383463)
chr4 (202-258)||(3220575-3220631)
chr4 (145-192)||(231437-231484)
chr4 (202-258)||(3221358-3221414)
chr4 (205-254)||(199060-199109)
chr4 (205-254)||(5825395-5825444)
chr4 (205-254)||(12640026-12640075)
chr4 (205-254)||(20075586-20075635)
chr4 (205-254)||(20422707-20422756)
chr4 (205-254)||(25369844-25369893)
chr4 (205-254)||(31876849-31876898)
chr4 (205-254)||(32291076-32291125)
chr4 (145-190)||(32449318-32449363)
chr4 (151-192)||(44932352-44932393)
chr4 (205-254)||(48091071-48091120)
chr4 (205-254)||(52597687-52597736)
chr4 (205-254)||(55815886-55815935)
chr4 (209-297)||(54453461-54453548)
[»] chr8 (26 HSPs)
chr8 (169-353)||(32536733-32536924)
chr8 (158-299)||(34992155-34992298)
chr8 (182-351)||(38023662-38023841)
chr8 (158-353)||(37639725-37639930)
chr8 (158-299)||(41859324-41859467)
chr8 (198-353)||(32537317-32537482)
chr8 (183-299)||(41859987-41860105)
chr8 (158-291)||(5035177-5035310)
chr8 (180-274)||(34992051-34992147)
chr8 (158-275)||(5034912-5035031)
chr8 (220-353)||(38024360-38024502)
chr8 (205-254)||(7818535-7818584)
chr8 (205-254)||(10806009-10806058)
chr8 (153-258)||(40449480-40449585)
chr8 (145-261)||(35943077-35943193)
chr8 (145-236)||(43924491-43924582)
chr8 (158-261)||(43924949-43925052)
chr8 (145-223)||(40450955-40451033)
chr8 (205-254)||(16880494-16880543)
chr8 (205-254)||(16889256-16889305)
chr8 (205-254)||(16889804-16889853)
chr8 (205-254)||(33114164-33114213)
chr8 (205-254)||(40309476-40309525)
chr8 (205-254)||(43591068-43591117)
chr8 (205-254)||(44062046-44062095)
chr8 (158-190)||(12349981-12350013)
[»] chr6 (18 HSPs)
chr6 (158-353)||(33479710-33479916)
chr6 (158-353)||(15083147-15083352)
chr6 (158-299)||(33480519-33480662)
chr6 (158-353)||(22579949-22580154)
chr6 (158-353)||(22587139-22587344)
chr6 (158-299)||(3542828-3542971)
chr6 (182-353)||(15082435-15082616)
chr6 (158-274)||(3542979-3543097)
chr6 (158-299)||(33018181-33018324)
chr6 (158-274)||(33018332-33018450)
chr6 (158-274)||(7193352-7193467)
chr6 (182-274)||(7193494-7193588)
chr6 (158-227)||(22582444-22582513)
chr6 (293-353)||(22580653-22580713)
chr6 (205-254)||(6032729-6032778)
chr6 (205-254)||(13944351-13944400)
chr6 (205-254)||(30610772-30610821)
chr6 (205-254)||(30611321-30611370)
[»] scaffold0311 (1 HSPs)
scaffold0311 (158-299)||(50-194)
[»] scaffold0041 (3 HSPs)
scaffold0041 (158-291)||(27235-27368)
scaffold0041 (293-353)||(27442-27502)
scaffold0041 (169-233)||(27534-27598)
[»] scaffold0332 (1 HSPs)
scaffold0332 (180-274)||(9174-9270)
[»] scaffold0700 (1 HSPs)
scaffold0700 (188-299)||(5363-5472)
[»] scaffold0150 (1 HSPs)
scaffold0150 (145-190)||(14013-14058)
[»] scaffold0039 (1 HSPs)
scaffold0039 (202-258)||(90673-90729)
[»] scaffold2003 (1 HSPs)
scaffold2003 (145-192)||(531-578)
[»] scaffold0007 (1 HSPs)
scaffold0007 (205-254)||(11326-11375)
[»] scaffold0042 (1 HSPs)
scaffold0042 (205-261)||(94311-94367)


Alignment Details
Target: chr1 (Bit Score: 130; Significance: 3e-67; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 158 - 343
Target Start/End: Original strand, 193864 - 194048
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattatt 257  Q
    |||||||||  |||| ||||| ||||||  |||||  || |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  193864 tgggaaaggagagttctttcccaccatgagaaagttaatcatgtccattaaattaaatgaggaacatattcttatcatactctctccacactagattatt 193963  T
Q  258 ttttatattatctttcatcatctctctttcatgtccccacaccaccaccactaaatcacagatttagcaacccttctgaccaccac 343  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  193964 ttttatattatctttcatcatctctctttcatgt-cccacaccaccaccactaaatcacaaatttagcaacccttctgaccaccac 194048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 23440631 - 23440773
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagattat 256  Q
    |||||||||  |||| ||||| || |||||||||| |||||||||| |||||||||||||| ||||||||| |||||||||||||| | |||||||||||    
T  23440631 tgggaaaggagagttctttccaactatggaaaagttgattatgtccattagattaaatgagaaacatattcctatcatactctctcaaccactagattat 23440730  T
Q  257 tttttatattatctttcatcatctctctttcatgtccccacac 299  Q
    |||||||| |||||||||   ||||||||||||||||||||||    
T  23440731 tttttatactatctttcacactctctctttcatgtccccacac 23440773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 158 - 353
Target Start/End: Complemental strand, 48972479 - 48972274
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||||||||| ||| |||||| |||||||||||||| ||||||||| |||||||||||||| | ||||||||||     
T  48972479 tgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctctcaaccactagattat 48972380  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgca 347  Q
    ||||||||| |||||||||   |||||||||||| |||||||        |||||||||||||||||||| ||| | ||||| |  ||||||||||||||    
T  48972379 ttttttatactatctttcacactctctctttcatatccccacacacccataccaccaccactaaatcacaaattcaacaaccatcttgaccaccactgca 48972280  T
Q  348 ccacca 353  Q
    ||||||    
T  48972279 ccacca 48972274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 150 - 353
Target Start/End: Complemental strand, 6076909 - 6076697
Alignment:
Q  150 atttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cac 248  Q
    |||||| |||||||| |  |||| ||||| || |||||||||| ||| |||||| ||| |||||||||| ||||||||| |||||||||||||| | ||     
T  6076909 atttagcatgggaaatgagagttctttcccactatggaaaagttgatcatgtccattatattaaatgagtaacatattcctatcatactctctcaaccaa 6076810  T
Q  249 tagattattttttatattatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccac 340  Q
    |||||||||||||||| |||||||||   ||||||||||||||||||||        |||||||||||||||||||| ||| | |||||  | ||| |||    
T  6076809 tagattattttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgatcac 6076710  T
Q  341 cactgcaccacca 353  Q
    |||||||||||||    
T  6076709 cactgcaccacca 6076697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 158 - 353
Target Start/End: Original strand, 16270221 - 16270427
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  16270221 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 16270320  T
Q  256 -ttttttatattatctttcatcatctctctttcatgtc--------cccacaccaccaccactaaatcacagatttagcaacccttctgaccaccactgc 346  Q
     ||||||||| |||||||||   || ||||||||||||        |||| |||||||||||||||||||| ||| | |||||  | |||||||||||||    
T  16270321 tttttttatactatctttcacactccctctttcatgtccctacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgc 16270420  T
Q  347 accacca 353  Q
    |||||||    
T  16270421 accacca 16270427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 182 - 353
Target Start/End: Complemental strand, 16271158 - 16270978
Alignment:
Q  182 catggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatcatc 279  Q
    ||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | |||||||||| ||||||||| ||| |||||   ||    
T  16271158 catgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattatttttttatactatatttcacactc 16271059  T
Q  280 tctctttcatgtccccac-------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    ||||||||||||||||||       |||||||||||||||||||| ||| | |||||  | ||||||||||||||||||||    
T  16271058 tctctttcatgtccccacacaccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgcaccacca 16270978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 9948009 - 9948152
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    ||||||||  ||||| ||||| ||||||||||||| ||| || | | |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  9948009 tgggaaagaaaagttctttcccaccatggaaaagttgatcatattcattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 9948108  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||| |||||||||   ||||||||||||||||||||||    
T  9948109 ttttttatactatctttcacactctctctttcatgtccccacac 9948152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 145 - 294
Target Start/End: Original strand, 47334200 - 47334350
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcc 244  Q
    ||||| |||||  ||| |||||| |||||||||| || |||| ||||| |||||||||| |||||||||||||| |||| || |||||| |||||||||     
T  47334200 gtggggtttagcctggaaaaggggagttgtttcccacaatgggaaagttgattatgtccattagattaaatgagaaacaaatccttatcctactctctca 47334299  T
Q  245 acactagattatt-ttttatattatctttcatcatctctctttcatgtccc 294  Q
    ||||||||||||| ||||| | |||||| || |||||||||||||||||||    
T  47334300 acactagattattgttttacactatcttccaccatctctctttcatgtccc 47334350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 12925909 - 12926036
Alignment:
Q  180 accatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattattttttatattatctttcatcatc 279  Q
    ||||| ||||||| ||| |||||| |||||||||||| |||| | ||||||||  ||||||||| ||| |||||||||||||| | |||||| || | ||    
T  12925909 accatagaaaagttgataatgtccattagattaaatgtggaatacattcttatactactctctcaacattagattattttttacactatcttccaccctc 12926008  T
Q  280 tctctttcatgtccccacaccaccacca 307  Q
    ||||||||||||||||||||||||||||    
T  12926009 tctctttcatgtccccacaccaccacca 12926036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 51974451 - 51974594
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccac-actagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||  ||||||||||||| |||||||||| |||||||||||||| || |||||||||     
T  51974451 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtctattagattaaatgaagaacatattcctatcatactctctcaactactagattat 51974550  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||| |||||||||   ||||||||||||||||||||||    
T  51974551 ttttttatactatctttcacattctctctttcatgtccccacac 51974594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 51975236 - 51975056
Alignment:
Q  183 atggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatcatct 280  Q
    |||| ||||| ||| |||||  |||||||||||||||||||||||| |||||||||||||  | |||||||||| ||||||||| |||||||||   |||    
T  51975236 atgggaaagttgatcatgtcaattagattaaatgaggaacatattcctatcatactctcttaaccactagattatttttttatactatctttcacactct 51975137  T
Q  281 ctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    |||||||||||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||||||||||||||    
T  51975136 ctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgcaccacca 51975056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 160 - 275
Target Start/End: Complemental strand, 9948919 - 9948803
Alignment:
Q  160 ggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagattattt 258  Q
    |||||||  |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||| ||||||||||| || | |||||||||||||    
T  9948919 ggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctatcaaccactagattattt 9948820  T
Q  259 tttatattatctttcat 275  Q
    |||||| ||||||||||    
T  9948819 tttatactatctttcat 9948803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 299
Target Start/End: Complemental strand, 31390846 - 31390718
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattattttttatattat 268  Q
    |||| ||||| ||||||| ||||| |||||||||| || || ||||||||||||| ||| ||||| ||||||||| ||| |||||||||||||| | |||    
T  31390846 agttctttcccaccatgggaaagttgattatgtccattggaataaatgaggaacacatttttatcctactctctcaacattagattattttttacactat 31390747  T
Q  269 ctttcatcatctctctttcatgtccccacac 299  Q
    ||||||   ||||||||||||||||||||||    
T  31390746 ctttca--ctctctctttcatgtccccacac 31390718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 158 - 353
Target Start/End: Original strand, 38930326 - 38930531
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    ||||||||| ||||| |||   ||||||| ||||| ||| || ||| ||| ||||||| |||||||||||| |||||||||||||| | ||||||||||     
T  38930326 tgggaaaggaaagttctttttcaccatgggaaagttgatcatatccattaaattaaataaggaacatattcctatcatactctctcaaccactagattat 38930425  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgca 347  Q
    ||||||||| |||||||||   |||||||||||||| |||||        |||||||||||||||||||| ||| | |||||  | ||||||||| ||||    
T  38930426 ttttttatactatctttcacactctctctttcatgttcccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccattgca 38930525  T
Q  348 ccacca 353  Q
    ||||||    
T  38930526 ccacca 38930531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 169 - 299
Target Start/End: Original strand, 43737754 - 43737886
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatatt 266  Q
    |||| ||||| ||||||| ||||| ||| |||||| ||||||||||||||||| ||||| ||||||||||||||| | |||||||||| ||||||| | |    
T  43737754 agttatttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatatttttatcatactctctcaaccactagattatttttttacact 43737853  T
Q  267 atctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||   ||||||||| ||||||||||||    
T  43737854 atctttcacattctctctttgatgtccccacac 43737886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 180 - 353
Target Start/End: Original strand, 17050489 - 17050659
Alignment:
Q  180 accatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattattttttatattatctttcatcatc 279  Q
    ||||||| ||||| ||| |||| | |||||||||||  || ||| ||||||||  ||||||||| | | |||||||||||||| | |||||| || | ||    
T  17050489 accatgggaaagttgataatgttcattagattaaatatggtacacattcttatactactctctcaatattagattattttttacactatcttccaccctc 17050588  T
Q  280 tctctttcatgtccccacaccaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    |||||||||||||||||||||||||||   |||||||| ||| |||||||  | |||||||||  |||||||||    
T  17050589 tctctttcatgtccccacaccaccacc---aaatcacatattcagcaaccactttgaccaccatcgcaccacca 17050659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 38931270 - 38931075
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccac-actagattatttttt--atat 265  Q
    |||| ||| ||||||||| ||||| ||| || ||| ||| ||||||| || ||||||||  |||||||||||||| || |||| ||||||||||  ||||    
T  38931270 agttcttttctaccatgggaaagttgatcatatccattaaattaaataagaaacatatttctatcatactctctcaaccactatattattttttttatat 38931171  T
Q  266 tatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    |||||||||   ||||||||||||||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||||||||||||||    
T  38931170 tatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgcaccacca 38931075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 23440899 - 23440781
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| ||||||||||||||||| |||||| |||||||||||||| | ||||||||||     
T  23440899 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcctatcatactctctcaaccactagattat 23440800  T
Q  256 ttttttatattatctttca 274  Q
    ||||||||| |||||||||    
T  23440799 ttttttatactatctttca 23440781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 43738012 - 43737894
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| | ||||| ||||| ||| |||||| |||||||||||||||||||||||| ||||||| |||||| | ||||||||||     
T  43738012 tgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatattctctcaaccactagattat 43737913  T
Q  256 ttttttatattatctttca 274  Q
    |||||||||||||||||||    
T  43737912 ttttttatattatctttca 43737894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 151 - 291
Target Start/End: Original strand, 6075981 - 6076119
Alignment:
Q  151 tttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacacta 250  Q
    ||||||||||||||||  |||| ||| ||||||||  ||||| ||| |||||| ||||||||||||||||| | ||| |||||||| |||||| ||||||    
T  6075981 tttagtatgggaaaggagagttcttttctaccatgagaaagttgatcatgtccattagattaaatgaggaatacatttttatcatagtctctcaacacta 6076080  T
Q  251 gattattttttatattatctttcatcatctctctttcatgt 291  Q
     ||||||||||| | |||||| ||   ||||||||||||||    
T  6076081 aattattttttacactatcttcca--ctctctctttcatgt 6076119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 205 - 353
Target Start/End: Original strand, 48971766 - 48971924
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatcatctctctttcatgtccccac----- 297  Q
    |||||||||||||||||||||||| |||||||||||||| | ||||| |||| ||||||||| |||||||||   |||||||||||||| |||||         
T  48971766 ttagattaaatgaggaacatattcctatcatactctctcaaccactatattatttttttatactatctttcacactctctctttcatgttcccacacacc 48971865  T
Q  298 ---accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
       |||||||||||||||||||| ||| | |||||  | | ||||||||||||||||||    
T  48971866 cataccaccaccactaaatcacaaattcaacaaccactttaaccaccactgcaccacca 48971924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 289
Target Start/End: Complemental strand, 50827109 - 50826992
Alignment:
Q  174 tttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctt 271  Q
    ||||| ||||||| ||||| ||| |||||| |||||||||||||| |||||||| ||||||||||||||| | ||||| |||| ||||||||| ||||||    
T  50827109 tttcccaccatgggaaagttgatcatgtccattagattaaatgagaaacatatttttatcatactctctcaaccactaaattatttttttatagtatctt 50827010  T
Q  272 tcatcatctctctttcat 289  Q
    |||   ||||||||||||    
T  50827009 tcacactctctctttcat 50826992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 188 - 342
Target Start/End: Original strand, 20794333 - 20794484
Alignment:
Q  188 aaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattattttttatattatctttcatcatctctctttc 287  Q
    ||||| ||| |||| | |||||||||||| |||||| ||||||||   |||||||| ||| |||||||||||||| | ||| || || | ||||||||||    
T  20794333 aaagttgataatgtgcattagattaaatgtggaacacattcttatatcactctctcaacattagattattttttacactattttccaccctctctctttc 20794432  T
Q  288 atgtccccacaccaccaccactaaatcacagatttagcaacccttctgaccacca 342  Q
    |||||||||||||||||  |   ||||||| |||||||||||  | |||||||||    
T  20794433 atgtccccacaccaccataa---aatcacatatttagcaaccactttgaccacca 20794484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 47334947 - 47334849
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctc 243  Q
    |||| ||||||||||||||| || |||||||||| ||||| | ||||| |||||||||| || ||||||||||| |||| ||  ||||| |||||||||    
T  47334947 gtggcatttagtatgggaaaagggagttgtttcccaccataggaaagttgattatgtccattggattaaatgagtaacaaatctttatcctactctctc 47334849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 27888701 - 27888765
Alignment:
Q  174 tttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatact 238  Q
    ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||    
T  27888701 tttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatact 27888765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 283
Target Start/End: Complemental strand, 194664 - 194610
Alignment:
Q  229 ttatcatactctctccacactagattattttttatattatctttcatcatctctc 283  Q
    |||||||||| |||| |||||||||||||||||||| ||||||||||| ||||||    
T  194664 ttatcatactatctctacactagattattttttatactatctttcatcctctctc 194610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 46133729 - 46133807
Alignment:
Q  180 accatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattattt 258  Q
    ||||||| |||||  ||||||||| | |||||||||||||| || ||||||||  ||||||||| ||| ||||||||||    
T  46133729 accatgggaaagtgaattatgtccatcagattaaatgaggagcacattcttatactactctctcaacattagattattt 46133807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 249
Target Start/End: Complemental strand, 49420996 - 49420898
Alignment:
Q  151 tttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacact 249  Q
    |||||||||||||||||||||||||||| |  |||||||||| |||| |  || || |||||||| |||| ||   |||||||||  ||||||||||||    
T  49420996 tttagtatgggaaagggaagttgtttcccatgatggaaaagttgattttagccatttgattaaataaggagcaccctcttatcatgttctctccacact 49420898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 37725440 - 37725489
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||||||||||| ||||||||||    
T  37725440 ttagattaagtgaagaacatattcttaacatactctctcaacactagatt 37725489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 40649579 - 40649514
Alignment:
Q  180 accatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca 245  Q
    ||||||| ||||| ||| |||||| |||||||||||| |||||| ||||||||  |||||||||||    
T  40649579 accatgggaaagttgataatgtccattagattaaatgtggaacacattcttatactactctctcca 40649514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 51248508 - 51248459
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||||||||||| ||||||||||    
T  51248508 ttagattaagtgaagaacatattcttaacatactctctcaacactagatt 51248459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 31787485 - 31787525
Alignment:
Q  151 tttagtatgggaaagggaagttgtttcctaccatggaaaag 191  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  31787485 tttagtatgggaatgggaagttgtttcccaccatggaaaag 31787525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 42383721 - 42383768
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagt 192  Q
    ||||| ||||||||||||||| |||||||||||||| ||||| |||||    
T  42383721 gtggggtttagtatgggaaagagaagttgtttcctatcatgggaaagt 42383768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 50267623 - 50267678
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagattattttt 260  Q
    |||||| |||||| ||  |||||||||||||| ||||||||||||| |||||||||    
T  50267623 ttagatcaaatgaagactatattcttatcatattctctccacactatattattttt 50267678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 274
Target Start/End: Original strand, 8560217 - 8560286
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagattattttttatattatctttca 274  Q
    ||||||||| ||| ||||||||||||| ||| |||| || |||||||||| || || ||| |||||||||    
T  8560217 ttagattaagtgaagaacatattcttaacatgctctttcaacactagatttttcttcatactatctttca 8560286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 27797761 - 27797712
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  27797761 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 27797712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 41563240 - 41563289
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||||||| |||| |||||||| ||| ||||||| ||||||||||    
T  41563240 ttagattaaatgaagaacgtattcttaacatgctctctcaacactagatt 41563289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 41563817 - 41563768
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  41563817 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 41563768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 42838998 - 42839047
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  42838998 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 42839047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 49533804 - 49533853
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  49533804 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 49533853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 297
Target Start/End: Original strand, 50950170 - 50950297
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattattttttatattat 268  Q
    |||||||||| |||||||||||||  ||| | ||| || | |||||| | |||||  || |||||||||||  || |||||||||||  ||||| | |||    
T  50950170 agttgtttcccaccatggaaaagtaaattttatccatttggttaaataaagaacacttttttatcatactccttcaacactagatta-attttacactat 50950268  T
Q  269 ctttcatcatctctctttcatgtccccac 297  Q
    |||| ||   |||||||||||||||||||    
T  50950269 cttttattccctctctttcatgtccccac 50950297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 6e-65; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 158 - 343
Target Start/End: Complemental strand, 4479736 - 4479552
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattatt 257  Q
    |||||||||  |||| ||||  ||||||| |||||  || |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4479736 tgggaaaggagagttctttctcaccatgggaaagttaatcatgtccattagattaaatgaggaacatattcttatcatactctctccacactaaattatt 4479637  T
Q  258 ttttatattatctttcatcatctctctttcatgtccccacaccaccaccactaaatcacagatttagcaacccttctgaccaccac 343  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  4479636 ttttatattatctttcatcatctctctttcatgt-cccacaccaccaccactaaagcacaaatttagcaacccttctgaccaccac 4479552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 31543280 - 31543159
Alignment:
Q  19 atatgttactcaacatataatttttcgtacaacatgagacttctaactcacgtttgatatatcaacattctatccctaagtgtgaaattagttgtatcct 118  Q
    ||||||| ||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31543280 atatgttgctcaacatataattttttgtgcaacatgagacttctaactcacatttgatatatcaacattctatccctaagtgtgaaattagttgtatcct 31543181  T
Q  119 tcatccaacatcgtatcactcc 140  Q
    ||||||||||||| ||||||||    
T  31543180 tcatccaacatcgcatcactcc 31543159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 158 - 353
Target Start/End: Original strand, 21471031 - 21471236
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctc-cacactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| ||||||||||||| |||||||||| ||||||||||||||   ||||||||||     
T  21471031 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaagaacatattcctatcatactctctcagccactagattat 21471130  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgca 347  Q
    ||||||||| |||||||||   ||||||||||||||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||||||||    
T  21471131 ttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgca 21471230  T
Q  348 ccacca 353  Q
    ||||||    
T  21471231 ccacca 21471236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 158 - 353
Target Start/End: Complemental strand, 21471988 - 21471783
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| || ||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  21471988 tgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 21471889  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgca 347  Q
    ||||||||| |||||||||   ||||||||||||||||||||        ||||||||||| |||||||| ||| | |||||  | ||||||||||||||    
T  21471888 ttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccaccaaatcacaaattcaacaaccactttgaccaccactgca 21471789  T
Q  348 ccacca 353  Q
    ||||||    
T  21471788 ccacca 21471783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 356
Target Start/End: Original strand, 37548012 - 37548222
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| | ||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  37548012 tgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 37548111  T
Q  256 ttttttatattatctttca---tcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccact 344  Q
    |||||||||  ||||||||   || ||||||||||||||||||||        |||||||||||||||||||| ||| | |||||  | |||||||||||    
T  37548112 ttttttataccatctttcacactc-tctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccact 37548210  T
Q  345 gcaccaccaaac 356  Q
    |||| |||||||    
T  37548211 gcactaccaaac 37548222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 38834417 - 38834544
Alignment:
Q  174 tttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctt 271  Q
    ||||| |||| || ||||| ||| |||||| ||||||||||||||||||||||| ||||||||||||||| | |||||||||| ||||||||| ||||||    
T  38834417 tttcccaccacgggaaagttgatcatgtccattagattaaatgaggaacatatttttatcatactctctcaaccactagattatttttttatactatctt 38834516  T
Q  272 tcatcatctctctttcatgtccccacac 299  Q
    |||   ||||||||||||||||||||||    
T  38834517 tcacactctctctttcatgtccccacac 38834544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 14573275 - 14573374
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattatt 257  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  14573275 tgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatatttttatcatactctctcaacactagattatt 14573374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 38834670 - 38834552
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||||||| ||| ||||| ||| |||||| ||||||||||||| |||||||||  |||||||||||||| | ||||||||||     
T  38834670 tgggaaaggagagttttttcctaccgtgggaaagttgatcatgtccattagattaaatgaagaacatatttctatcatactctctcaaccactagattat 38834571  T
Q  256 ttttttatattatctttca 274  Q
    |||||||||||||||||||    
T  38834570 ttttttatattatctttca 38834552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 229 - 283
Target Start/End: Original strand, 4478936 - 4478990
Alignment:
Q  229 ttatcatactctctccacactagattattttttatattatctttcatcatctctc 283  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  4478936 ttatcatactctctccacactagattattttttatactatctttcatcctctctc 4478990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 13134332 - 13134450
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||| | ||||| ||| |||||| ||| |||||||||||||||||||  ||||||||||| || | ||||||||||     
T  13134332 tgggaaaggagagttctttcccaccataggaaagttgatcatgtccattaaattaaatgaggaacatatttctatcatactctatcaaccactagattat 13134431  T
Q  256 ttttttatattatctttca 274  Q
    ||||||||| |||||||||    
T  13134432 ttttttatactatctttca 13134450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 36390958 - 36391067
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcc 244  Q
    ||||| ||||| |||||||||||||||||||||| ||||||| |||||  ||| |  || |||||| |||||||||||| ||| | ||| || ||||||     
T  36390958 gtggggtttagcatgggaaagggaagttgtttcccaccatgggaaagtaaattttaaccattagatcaaatgaggaacacattttaatcctattctctca 36391057  T
Q  245 acactagatt 254  Q
    ||||||||||    
T  36391058 acactagatt 36391067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 260
Target Start/End: Complemental strand, 14574033 - 14573930
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagattat 256  Q
    |||||||||  |||| ||||| |||||   ||||| ||| || ||| |||||||||||||| ||||||||| |||||||||||||| | ||||||||| |    
T  14574033 tgggaaaggagagttctttcccaccataagaaagttgatcatatccattagattaaatgagaaacatattcctatcatactctctcaaccactagattgt 14573934  T
Q  257 tttt 260  Q
    ||||    
T  14573933 tttt 14573930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 4975703 - 4975743
Alignment:
Q  151 tttagtatgggaaagggaagttgtttcctaccatggaaaag 191  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  4975703 tttagtatgggaatgggaagttgtttcccaccatggaaaag 4975743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 258
Target Start/End: Complemental strand, 36391713 - 36391606
Alignment:
Q  151 tttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacacta 250  Q
    ||||||||||||||||| |||||||| | ||||||| |||||  ||| |  || ||| ||||||||||||||  | ||||||  || || ||| ||||||    
T  36391713 tttagtatgggaaaggggagttgttttccaccatgggaaagtaaattttaaccattaaattaaatgaggaacgcactcttattttattccctcaacacta 36391614  T
Q  251 gattattt 258  Q
    ||||||||    
T  36391613 gattattt 36391606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 9224327 - 9224393
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagattattttttatattatctt 271  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| |||||||||| || || | ||||||||    
T  9224327 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatttttcttcacattatctt 9224393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 11256177 - 11256226
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  11256177 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 11256226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 17918710 - 17918661
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  17918710 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 17918661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 178
Target Start/End: Complemental strand, 24383110 - 24383077
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcc 178  Q
    ||||| ||||||||||||||||||||||||||||    
T  24383110 gtggggtttagtatgggaaagggaagttgtttcc 24383077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 28223849 - 28223898
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  28223849 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 28223898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 39477350 - 39477301
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  39477350 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 39477301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 192
Target Start/End: Complemental strand, 41519966 - 41519925
Alignment:
Q  151 tttagtatgggaaagggaagttgtttcctaccatggaaaagt 192  Q
    |||||||||||||||||||||| ||||| ||||||| |||||    
T  41519966 tttagtatgggaaagggaagttttttcccaccatgggaaagt 41519925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 4993611 - 4993651
Alignment:
Q  151 tttagtatgggaaagggaagttgtttcctaccatggaaaag 191  Q
    ||||||||||||| |||||||||||| | ||||||||||||    
T  4993611 tttagtatgggaatgggaagttgttttccaccatggaaaag 4993651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 279
Target Start/End: Original strand, 23875247 - 23875374
Alignment:
Q  151 tttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacacta 250  Q
    ||||| ||||||||||| | |||||||  | ||||| |||||   ||||| || |||||| |  | ||||||||| | |||||||| ||| || ||||||    
T  23875247 tttagcatgggaaaggggaattgtttcgcatcatgggaaagttttttatgaccattagatcatgtaaggaacataatattatcatagtctttcaacacta 23875346  T
Q  251 gattattttttatattatctttcatcatc 279  Q
    ||||| |||||| |||||||| |||||||    
T  23875347 gatta-tttttacattatcttccatcatc 23875374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 37545692 - 37545768
Alignment:
Q  160 ggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcata 236  Q
    ||||||||||||||||||| ||||||| |||||  | | || || ||||||||| | | ||||| ||||||||||||    
T  37545692 ggaaagggaagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaacacattcttatcata 37545768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 9e-58; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 158 - 343
Target Start/End: Original strand, 41194527 - 41194710
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattatt 257  Q
    |||||||||  |||| ||||| ||||||| |||||  || |||||| ||| ||||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  41194527 tgggaaaggagagttctttcccaccatgggaaagttaatcatgtccattaaattaa-tgaggaacatattcttatcatactctttccacactaaattatt 41194625  T
Q  258 ttttatattatctttcatcatctctctttcatgtccccacaccaccaccactaaatcacagatttagcaacccttctgaccaccac 343  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  41194626 ttttatattatctttcatcatctctctttcatgt-cccacaccaccaccactaaagcacaaatttagcaacccttctgaccaccac 41194710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 160 - 353
Target Start/End: Original strand, 38071914 - 38072117
Alignment:
Q  160 ggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-tt 257  Q
    |||||||  |||| ||||| | ||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | |||||||||| ||    
T  38071914 ggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattattt 38072013  T
Q  258 ttttatattatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcacc 349  Q
    ||||||| |||||||||   ||||||||||||||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||||||||||    
T  38072014 ttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgcacc 38072113  T
Q  350 acca 353  Q
    ||||    
T  38072114 acca 38072117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 158 - 353
Target Start/End: Original strand, 668193 - 668398
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| ||||||||||||| |||||||||| |||||||||||||| | ||| ||||||     
T  668193 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaagaacatattcctatcatactctctcaaccaccagattat 668292  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgca 347  Q
    ||||||||| |||||||||   ||||||||||||||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||||||||    
T  668293 ttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgca 668392  T
Q  348 ccacca 353  Q
    ||||||    
T  668393 ccacca 668398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 17145636 - 17145780
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  17145636 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 17145735  T
Q  256 -ttttttatattatctttcatcatctctctttcatgtccccacac 299  Q
     ||||||||| |||||||||   ||||||||||||||||||||||    
T  17145736 tttttttatactatctttcacactctctctttcatgtccccacac 17145780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 169 - 299
Target Start/End: Complemental strand, 37864330 - 37864198
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatatt 266  Q
    |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||| ||||||||| |||||||||||||| | |||||||||| ||||||||| |    
T  37864330 agttctttcccaccatgggaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctctcaaccactagattatttttttatact 37864231  T
Q  267 atctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||   ||||||||||||||||||||||    
T  37864230 atctttcacactctctctttcatgtccccacac 37864198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 669126 - 668932
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatatt 266  Q
    |||| ||||| ||||| | ||||| ||| || ||| |||||| ||||||||||||||||| |||||||||||||| | |||||||||| ||||||||| |    
T  669126 agttttttcccaccataggaaagttgatcatatccattagatcaaatgaggaacatattcctatcatactctctcaaccactagattatttttttatact 669027  T
Q  267 atctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    ||||||||   ||||||||||||||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||| ||||||||||    
T  669026 atctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccattgcaccacca 668932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 158 - 291
Target Start/End: Complemental strand, 7677843 - 7677710
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattatt 257  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||| | ||||||||||||||||||| |||||||||||| |||||| |||||| ||||||    
T  7677843 tgggaaaggagagttctttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacacattcttatcatattctctcaacactaaattatt 7677744  T
Q  258 ttttatattatctttcatcatctctctttcatgt 291  Q
    ||||| | |||||| || | ||||||||||||||    
T  7677743 ttttacaatatcttccaccctctctctttcatgt 7677710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 160 - 291
Target Start/End: Original strand, 4261221 - 4261353
Alignment:
Q  160 ggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagattattt 258  Q
    |||||||  |||| ||| ||||||||| ||||| ||| |||||| ||||||||||||||||| | ||||||||||||||||||| | |||||||||||||    
T  4261221 ggaaaggagagttcttttctaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaaccactagattattt 4261320  T
Q  259 tttatattatctttcatcatctctctttcatgt 291  Q
    |||| | |||||| || | ||||||||||||||    
T  4261321 tttacactatcttccaacctctctctttcatgt 4261353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 174 - 353
Target Start/End: Original strand, 7677447 - 7677636
Alignment:
Q  174 tttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctt 271  Q
    ||||| |||||| |||||| ||| |||||| |||||||||||||||||||||||  |||||||||||||| | ||||| |||| ||||||||| ||||||    
T  7677447 tttcccaccatgaaaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaaccactaaattatttttttatactatctt 7677546  T
Q  272 tcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    | |   ||||||||||||||||||||        |||||||||||||||||||| ||| | ||| |  | ||||||||||||||||||||    
T  7677547 ttacactctctctttcatgtccccacagactcataccaccaccactaaatcacaaattcaacaatcactttgaccaccactgcaccacca 7677636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 160 - 300
Target Start/End: Complemental strand, 4261628 - 4261486
Alignment:
Q  160 ggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-tt 257  Q
    |||||||  |||| ||||| ||||||| ||||| ||| || ||| |||||||||||||||||||||||  |||||||||||||| | || ||||||| ||    
T  4261628 ggaaaggagagttctttcccaccatgggaaagttgatcatctccattagattaaatgaggaacatatttctatcatactctctcaaccattagattattt 4261529  T
Q  258 ttttatattatctttcatcatctctctttcatgtccccacacc 300  Q
    ||||||| |||||||||   |||||||||||||||||||||||    
T  4261528 ttttatactatctttcacactctctctttcatgtccccacacc 4261486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 257
Target Start/End: Complemental strand, 38779597 - 38779498
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattatt 257  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| ||||||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  38779597 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcttataatactctctcaacactagattatt 38779498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 291
Target Start/End: Complemental strand, 38072303 - 38072191
Alignment:
Q  180 accatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagattattttttatattatctttcatcat 278  Q
    ||||||| ||||| ||| |||||| ||||||||||||| ||| | ||||||||||||||||||| | ||||||||||||||||| | |||||| || | |    
T  38072303 accatgggaaagttgatcatgtccattagattaaatgatgaatacattcttatcatactctctcaaccactagattattttttacactatcttccaccct 38072204  T
Q  279 ctctctttcatgt 291  Q
    |||||||||||||    
T  38072203 ctctctttcatgt 38072191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 205 - 353
Target Start/End: Original strand, 32859294 - 32859439
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagattattttttatattatctttcatcatctctctttcatgtccccacaccacca 304  Q
    |||||||||||| |||||| ||||||||  ||||||||| ||| || ||||||||||| | |||||| || | |||| ||||||||||||||||||| ||    
T  32859294 ttagattaaatgtggaacacattcttatactactctctcaacattaaattattttttacactatcttccaccctctcactttcatgtccccacaccatca 32859393  T
Q  305 ccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    ||   |||||||| ||| |||||||  | |||||||||  |||||||||    
T  32859394 cc---aaatcacatattcagcaaccactttgaccaccatcgcaccacca 32859439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 260
Target Start/End: Original strand, 38778868 - 38778971
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagattat 256  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| || ||| |||||||||||||||| ||||||| |||||||||||||| | |||||||||||    
T  38778868 tgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggagcatattcctatcatactctctcaaccactagattat 38778967  T
Q  257 tttt 260  Q
    ||||    
T  38778968 tttt 38778971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 17145906 - 17145788
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| |||  ||| |||| ||||| ||| |||||| |||||||||||||  ||||||||| |||||||||||||| | ||||||||||     
T  17145906 tgggaaaggagagttcttttttactatgggaaagttgatcatgtccattagattaaatgaataacatattcctatcatactctctcaaccactagattat 17145807  T
Q  256 ttttttatattatctttca 274  Q
    |||||||||||||||||||    
T  17145806 ttttttatattatctttca 17145788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 229 - 283
Target Start/End: Complemental strand, 41195329 - 41195275
Alignment:
Q  229 ttatcatactctctccacactagattattttttatattatctttcatcatctctc 283  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  41195329 ttatcatactctctccacactagattattttttatactatctttcatcctctctc 41195275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 261
Target Start/End: Original strand, 40257581 - 40257697
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcc 244  Q
    ||||| |||||||||||||| |  |||||||| | |||||||||||||   || ||||| |||||| ||||||| |||| |||||||||||  ||| ||     
T  40257581 gtggggtttagtatgggaaatgagagttgttttcgaccatggaaaagttatttttgtccattagatcaaatgagaaacacattcttatcatgatctatca 40257680  T
Q  245 acactagattatttttt 261  Q
    ||||| |||||||||||    
T  40257681 acacttgattatttttt 40257697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 261
Target Start/End: Original strand, 42607082 - 42607198
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcc 244  Q
    ||||| ||||| ||||||||||| | |||||||| ||||||| ||||| | || ||||| |||||| ||||||| |||| | |||||||||  ||| ||     
T  42607082 gtggggtttagcatgggaaaggggaattgtttcccaccatgggaaagttgtttttgtccattagatcaaatgagaaacacaatcttatcatgatctatca 42607181  T
Q  245 acactagattatttttt 261  Q
    ||||| |||||||||||    
T  42607182 acacttgattatttttt 42607198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 289
Target Start/End: Complemental strand, 33323915 - 33323807
Alignment:
Q  183 atggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattatt--ttttatattatctttcatcatct 280  Q
    |||||||| | |||||||||  ||||||||||||||||||||||||||||    ||||| | |||||| ||||||  ||||| | ||||||||||  |||    
T  33323915 atggaaaaattgattatgtctgttagattaaatgaggaacatattcttattccgctctcacaacactatattatttattttacactatctttcattctct 33323816  T
Q  281 ctctttcat 289  Q
    |||||||||    
T  33323815 ctctttcat 33323807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 151 - 279
Target Start/End: Complemental strand, 36845243 - 36845116
Alignment:
Q  151 tttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacacta 250  Q
    ||||| ||||||||||| | |||||||  | |||||||||||   ||||| || ||||||||  | ||||||||| | |||||||| || ||| ||||||    
T  36845243 tttagcatgggaaaggggaattgtttctcatcatggaaaagttttttatgaccattagattatgtaaggaacataatattatcatagtccctcaacacta 36845144  T
Q  251 gattattttttatattatctttcatcatc 279  Q
    |||||| ||||| |||||||| |||||||    
T  36845143 gattat-ttttacattatcttccatcatc 36845116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 24321487 - 24321537
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatta 255  Q
    |||||| |||||||||||||||| |||||||||||||||  ||||||||||    
T  24321487 ttagatcaaatgaggaacatatttttatcatactctctcatcactagatta 24321537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 27855626 - 27855675
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||||||| ||||||| ||||||||||    
T  27855626 ttagattaagtgaagaacatattcttatcatgctctctcaacactagatt 27855675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 40257843 - 40257759
Alignment:
Q  151 tttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcat 235  Q
    ||||| |||||||| || |||||||||| ||||||  ||||| | || ||||| |||||| ||||||| |||| |||||||||||    
T  40257843 tttagcatgggaaatgggagttgtttcccaccatgagaaagttgtttttgtccattagatcaaatgagaaacacattcttatcat 40257759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 9122651 - 9122694
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaa 188  Q
    |||| |||||| |||||||||||||||||||||| |||||||||    
T  9122651 gtggcatttagcatgggaaagggaagttgtttcccaccatggaa 9122694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 37469039 - 37468976
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaa 221  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||    
T  37469039 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaa 37468976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 24322338 - 24322288
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatta 255  Q
    |||||| |||||||||||| ||| |||||||||||||||  ||||||||||    
T  24322338 ttagatcaaatgaggaacacatttttatcatactctctcatcactagatta 24322288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 259
Target Start/End: Complemental strand, 32499897 - 32499843
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagattatttt 259  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| |||||||||| ||||    
T  32499897 ttagattaagtgaagaacatattcttaacatgctctctcaacactagattttttt 32499843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 4895107 - 4895058
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  4895107 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 4895058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 6730204 - 6730163
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatgg 186  Q
    ||||| ||||| |||||||||||||||||||||| |||||||    
T  6730204 gtggggtttagcatgggaaagggaagttgtttcccaccatgg 6730163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 24044068 - 24044019
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  24044068 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 24044019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 32499310 - 32499359
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  32499310 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 32499359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 34854021 - 34853972
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  34854021 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 34853972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 36682896 - 36682945
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  36682896 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 36682945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 46815087 - 46815038
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||||||| ||||||||||||| ||| ||||||| ||| ||||||    
T  46815087 ttagattaaatgaagaacatattcttaacatgctctctcaacattagatt 46815038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 47814032 - 47814081
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  47814032 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 47814081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 47814660 - 47814611
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  47814660 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 47814611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 183 - 353
Target Start/End: Original strand, 45500512 - 45500683
Alignment:
Q  183 atggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattatt-ttttatattatctttcatcatctc 281  Q
    |||| ||||| |||||||||| ||||||||||||||||||| ||||||||  ||||||||| ||||||||||||| ||||||  |||||| || | ||||    
T  45500512 atgggaaagttgattatgtccattagattaaatgaggaacacattcttattctactctctcaacactagattattgttttat-ctatcttccaccctctc 45500610  T
Q  282 tctttcatgtccccacac-caccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    |||||||||||||||| | |||||||||||||||| ||||| |||||||  ||||||||||||||||||||||    
T  45500611 tctttcatgtccccacccacaccaccactaaatcatagattcagcaaccactctgaccaccactgcaccacca 45500683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 158 - 299
Target Start/End: Complemental strand, 19132846 - 19132703
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    ||||||||| ||||| ||||| ||||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||     
T  19132846 tgggaaaggaaagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcttatcatactctctcaaccactggattat 19132747  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccacac 299  Q
    |||||||||||||||||||   ||||||||||||||||||||||    
T  19132746 ttttttatattatctttcacattctctctttcatgtccccacac 19132703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 38923688 - 38923494
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatatt 266  Q
    |||| ||||| ||||||||||||| ||| |||| | |||||||||||||||||||||||  |||||||||||||| | |||||||||| ||||||||| |    
T  38923688 agttctttcccaccatggaaaagttgataatgttcattagattaaatgaggaacatatttctatcatactctctcaaccactagattatttttttatact 38923589  T
Q  267 atctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    ||||||||   ||||||||||||||||||||        |||||||||||||||||||| ||| |||||||  | ||||||||||||||||||||    
T  38923588 atctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcagcaaccactttgaccaccactgcaccacca 38923494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 158 - 353
Target Start/End: Complemental strand, 36750471 - 36750267
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagattat 256  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||| | |||||||||||||||||||||||  |||||||||||||| | |||||||||||    
T  36750471 tgggaaaggagagttctttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacatatttctatcatactctctcaaccactagattat 36750372  T
Q  257 tttttatattatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcac 348  Q
    |||||||| |||||||||   ||||||||||||||||||||        ||||||||| |||||||||| ||| | |||||  | |||||||||||||||    
T  36750371 tttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccgctaaatcacaaattcaacaaccactttgaccaccactgcac 36750272  T
Q  349 cacca 353  Q
    |||||    
T  36750271 cacca 36750267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 158 - 353
Target Start/End: Original strand, 38922757 - 38922962
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||||||||||| ||||| ||| || ||| |||||||||||||| ||||||||| |||||||||||||| | ||||||||||     
T  38922757 tgggaaaggagagttatttcctaccatgggaaagttgatcatatccattagattaaatgagaaacatattcctatcatactctctcaaccactagattat 38922856  T
Q  256 ttttttatattatctttcatcatctctctttcatgtc--------cccacaccaccaccactaaatcacagatttagcaacccttctgaccaccactgca 347  Q
    ||||||||| |||||||||   |||||||||||||||        |||| |||||||||||||||||||| ||| | |||||  | ||||||||||||||    
T  38922857 ttttttatactatctttcacactctctctttcatgtcctcacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgca 38922956  T
Q  348 ccacca 353  Q
    ||||||    
T  38922957 ccacca 38922962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 158 - 299
Target Start/End: Complemental strand, 32490229 - 32490086
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||||||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  32490229 tgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 32490130  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||| |||||||||   || |||||||||||||||||||    
T  32490129 ttttttatactatctttcacactccctctttcatgtccccacac 32490086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 353
Target Start/End: Original strand, 3971028 - 3971211
Alignment:
Q  180 accatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatca 277  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | |||| ||||| ||||||||| |||||||||       
T  3971028 accatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccacttgattatttttttatactatctttcacac 3971127  T
Q  278 tctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    ||||||||||||||||||||        |||||||||| ||||||||| ||| | |||||  | ||||||||||||||||||||    
T  3971128 tctctctttcatgtccccacacacccataccaccaccagtaaatcacaaattcaacaaccactttgaccaccactgcaccacca 3971211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 353
Target Start/End: Complemental strand, 45242999 - 45242816
Alignment:
Q  180 accatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatca 277  Q
    ||||||| ||||| ||| || ||  |||||||||||||||||||||||| |||||||||||||| | |||||||||| |||||||||||||||||||       
T  45242999 accatgggaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctctcaaccactagattatttttttatattatctttcacac 45242900  T
Q  278 tctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    ||||||||||||||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||||||||||||||    
T  45242899 tctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgcaccacca 45242816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 182 - 353
Target Start/End: Original strand, 45242104 - 45242285
Alignment:
Q  182 catggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatcatc 279  Q
    ||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | |||||||||| ||||||||| |||||||||   ||    
T  45242104 catgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattatttttttatactatctttcacactc 45242203  T
Q  280 tctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    ||||||||||||||||||        || ||||||||||||||||| ||| | |||||  | ||||||||||||||||||||    
T  45242204 tctctttcatgtccccacacacccatacaaccaccactaaatcacaaattcaacaaccactttgaccaccactgcaccacca 45242285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 180 - 353
Target Start/End: Complemental strand, 3998853 - 3998670
Alignment:
Q  180 accatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatca 277  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | |||| ||||| ||||||||| ||||||| |       
T  3998853 accatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccacttgattatttttttatactatcttttacac 3998754  T
Q  278 tctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    ||||||||||||||||||||        |||||||||| ||||||||| ||| | |||||  | ||||||||||||||||||||    
T  3998753 tctctctttcatgtccccacacacccataccaccaccagtaaatcacaaattcaacaaccactttgaccaccactgcaccacca 3998670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 353
Target Start/End: Original strand, 44686298 - 44686473
Alignment:
Q  188 aaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatcatctctctt 285  Q
    ||||| ||| |||||| |||||||||||||| ||||||||| |||||||||||||| | |||||||||| ||||||||| |||||||||   ||||||||    
T  44686298 aaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctctcaaccactagattatttttttatactatctttcacactctctctt 44686397  T
Q  286 tcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    ||||||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||||||||||||||    
T  44686398 tcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgcaccacca 44686473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 184 - 353
Target Start/End: Original strand, 52491926 - 52492105
Alignment:
Q  184 tggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatcatctc 281  Q
    ||||||||| ||| |||||| ||||||||||| |||||||||||  |||||||||||||| | |||||||||| ||||||||| |||||||||   ||||    
T  52491926 tggaaaagttgatcatgtccattagattaaataaggaacatatttctatcatactctctcaaccactagattatttttttatactatctttcacactctc 52492025  T
Q  282 tctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    ||||||||||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||||||||||||||    
T  52492026 tctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgcaccacca 52492105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 19132577 - 19132695
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| |||||||| |||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  19132577 tgggaaaggagagttctttcctactatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 19132676  T
Q  256 ttttttatattatctttca 274  Q
    |||||||||||||||||||    
T  19132677 ttttttatattatctttca 19132695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 158 - 291
Target Start/End: Original strand, 36750059 - 36750193
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagattat 256  Q
    |||||||||  |||| ||| | ||||||||||||| ||| |||| | ||||||||||||||||| | ||||||||||||||||||| | |||||||||||    
T  36750059 tgggaaaggagagttcttttccaccatggaaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 36750158  T
Q  257 tttttatattatctttcatcatctctctttcatgt 291  Q
    |||||| | |||||| || | ||||||||||||||    
T  36750159 tttttacactatcttccaccctctctctttcatgt 36750193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 160 - 353
Target Start/End: Complemental strand, 41756464 - 41756261
Alignment:
Q  160 ggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-tt 257  Q
    |||||||  |||| ||||| | ||||| ||||| ||| |||| | |||||||||||||||||||||||| |||||||||||||| | || ||||||| ||    
T  41756464 ggaaaggagagttctttcccatcatgggaaagttgatcatgttcattagattaaatgaggaacatattcctatcatactctctcaaccattagattattt 41756365  T
Q  258 ttttatattatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcacc 349  Q
    ||||||| |||||||||   ||||||||||||||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||| |||||     
T  41756364 ttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccattgcact 41756265  T
Q  350 acca 353  Q
    ||||    
T  41756264 acca 41756261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 180 - 291
Target Start/End: Complemental strand, 52492291 - 52492179
Alignment:
Q  180 accatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagattattttttatattatctttcatcat 278  Q
    ||||||||||||| | | |||||| ||||||||||||||||| | ||||||||||||||||||| | ||||||||||||||||| | |||||| || | |    
T  52492291 accatggaaaagttgttcatgtccattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttccaccct 52492192  T
Q  279 ctctctttcatgt 291  Q
    |||||||||||||    
T  52492191 ctctctttcatgt 52492179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 343
Target Start/End: Complemental strand, 3971911 - 3971744
Alignment:
Q  183 atggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatcatct 280  Q
    |||| ||||| ||| || ||| |||||||||||||||||||||||  |||||||||||||| | |||||||||| ||||||||| |||||||||   |||    
T  3971911 atgggaaagttgatcatatccattagattaaatgaggaacatatttctatcatactctctcaaccactagattatttttttatactatctttcacactct 3971812  T
Q  281 ctctttcatgtccccacac-----caccaccactaaatcacagatttagcaacccttctgaccaccac 343  Q
    |||||||||||||||||||      ||||||||||||||||| ||| | |||||  | ||||||||||    
T  3971811 ctctttcatgtccccacacactcataccaccactaaatcacaaattcaacaaccactttgaccaccac 3971744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 343
Target Start/End: Original strand, 3997967 - 3998134
Alignment:
Q  183 atggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccac-actagattatttttt-atattatctttcatcatct 280  Q
    |||| ||||| ||| || ||| |||||||||||||||||||||||  |||||||||||||| || ||||||||||||||| ||| |||||||||   |||    
T  3997967 atgggaaagttgatcatatccattagattaaatgaggaacatatttctatcatactctctcaaccactagattatttttttatactatctttcacactct 3998066  T
Q  281 ctctttcatgtccccacacc-----accaccactaaatcacagatttagcaacccttctgaccaccac 343  Q
    |||||||||||||||||||      ||||||||||||||||| ||| | |||||  | ||||||||||    
T  3998067 ctctttcatgtccccacacacccataccaccactaaatcacaaattcaacaaccactttgaccaccac 3998134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 41755513 - 41755656
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||  ||| | ||| |||| | |||||||||||||||||||||||  |||||||||||||| | ||||| ||||     
T  41755513 tgggaaaggagagttttttcccaccatgagaaaattgatcatgttcattagattaaatgaggaacatatttctatcatactctctcaaccactatattat 41755612  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||| |||||||||   ||||||||||||||||||||||    
T  41755613 ttttttatactatctttcacactctctctttcatgtccccacac 41755656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 295
Target Start/End: Complemental strand, 44687175 - 44687058
Alignment:
Q  180 accatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatca 277  Q
    ||||||||||||| ||| || | | ||||||||||||||||| |||||| |||||||||||||| | || ||||||| ||||||||| |||||||||       
T  44687175 accatggaaaagttgatcatattcattagattaaatgaggaaaatattcctatcatactctctcaaccattagattatttttttatactatctttcacac 44687076  T
Q  278 tctctctttcatgtcccc 295  Q
    ||||||||||||||||||    
T  44687075 tctctctttcatgtcccc 44687058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 8427277 - 8427326
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  8427277 ttagattaaatgaagaacatattcttatcatgctctctcaacactagatt 8427326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 32489982 - 32490078
Alignment:
Q  180 accatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttca 274  Q
    ||||||| ||||| ||| |||||| ||||||||||| |||||||||||  |||||||||||||| | ||||  |||| ||||||||| |||||||||    
T  32489982 accatgggaaagttgatcatgtccattagattaaataaggaacatatttctatcatactctctcaaccactgaattatttttttatactatctttca 32490078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 151 - 279
Target Start/End: Complemental strand, 49161849 - 49161722
Alignment:
Q  151 tttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacacta 250  Q
    ||||| ||||||||||| | |||||||| ||||||| |||||   |||||  | |||||| |  | ||||||||| | |||||||| ||| || ||||||    
T  49161849 tttagcatgggaaaggggaattgtttcccaccatgggaaagttttttatgagcattagatcatgtaaggaacataatattatcatagtctttcaacacta 49161750  T
Q  251 gattattttttatattatctttcatcatc 279  Q
    |||||| |||||||||||||| |||||||    
T  49161749 gattat-ttttatattatcttccatcatc 49161722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 8440221 - 8440127
Alignment:
Q  180 accatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattattttttatattatctttca 274  Q
    |||||| |||||| ||| |||| | || ||||||||| |||||| ||| ||||  ||||||||| ||| |||||||||||||| | |||||||||    
T  8440221 accatgaaaaagttgataatgtgcatttgattaaatgtggaacacattattatactactctctcaacattagattattttttacactatctttca 8440127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 49160988 - 49161034
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaag 191  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  49160988 gtggggtttagcatgggaaaggggagttgtttcctaccatggaaaag 49161034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 47737698 - 47737649
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||||||| ||||||| ||||||||||    
T  47737698 ttagattaagtgaagaacatattcttatcatgctctctcaacactagatt 47737649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 25025235 - 25025290
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagattattttt 260  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| |||||||||| |||||    
T  25025235 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatttttttt 25025290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 38337511 - 38337408
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattatt 257  Q
    ||||||||||||||||||||| ||||||| ||||   ||| || || |||||||||||   ||||||||| ||||||||  | ||| |||| ||||| ||    
T  38337511 tgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcatagacactcaacaccagattttt 38337412  T
Q  258 tttt 261  Q
    ||||    
T  38337411 tttt 38337408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 3944956 - 3945005
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  3944956 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 3945005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 8427768 - 8427719
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  8427768 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 8427719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 8652811 - 8652920
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcc 244  Q
    ||||| ||||| ||||||||||| | | | |||| ||||||| |||||  ||| |  || || |||||||||||||||| ||| | ||| |||||||||     
T  8652811 gtggggtttagcatgggaaaggggaatcggttcccaccatgggaaagtaaattttcaccatttgattaaatgaggaacacattttaatcctactctctca 8652910  T
Q  245 acactagatt 254  Q
    ||||||||||    
T  8652911 acactagatt 8652920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 19555948 - 19555899
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  19555948 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 19555899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 23584908 - 23584859
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  23584908 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 23584859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 23599731 - 23599682
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  23599731 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 23599682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 29342402 - 29342451
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||| ||||||||||||||    
T  29342402 ttagattaagtgaagaacatattcttaacatgctccctccacactagatt 29342451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 29343018 - 29342969
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  29343018 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 29342969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 37374876 - 37374925
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  37374876 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 37374925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 38575082 - 38575131
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||||||| ||||||||||||| |||  |||||| ||||||||||    
T  38575082 ttagattaaatgaagaacatattcttaacatgttctctcaacactagatt 38575131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 40887966 - 40887917
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  40887966 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 40887917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 41875641 - 41875592
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  41875641 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 41875592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 42356297 - 42356346
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  42356297 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 42356346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 44868643 - 44868594
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  44868643 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 44868594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 49752334 - 49752383
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  49752334 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 49752383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 50687733 - 50687684
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  50687733 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 50687684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 55281896 - 55281945
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  55281896 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 55281945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 46187023 - 46186967
Alignment:
Q  202 cctttagattaaatgaggaacatattcttatcatactctctccacactagattattt 258  Q
    ||||||||| |||| | ||||| |||||||| ||||||||||  |||||||||||||    
T  46187023 cctttagatcaaatcaagaacacattcttataatactctctcatcactagattattt 46186967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 158 - 353
Target Start/End: Complemental strand, 33002850 - 33002645
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  33002850 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 33002751  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccc--------cacaccaccaccactaaatcacagatttagcaacccttctgaccaccactgca 347  Q
    ||||||||| |||||||||   |||||||||||||||||        || |||||||||||||||||||| ||| | |||||  | ||||||||||||||    
T  33002750 ttttttatactatctttcacactctctctttcatgtccccaaacactcataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgca 33002651  T
Q  348 ccacca 353  Q
    ||||||    
T  33002650 ccacca 33002645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 158 - 299
Target Start/End: Complemental strand, 687382 - 687239
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||| | || |||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||| | ||||| ||||     
T  687382 tgggaaaggagagttcttttccactatggaaaagttgattatgtccattagattaaatgaggaacatattcctatcatactctctcaatcactaaattat 687283  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||| |||||||||   ||||||||||||||||||||||    
T  687282 ttttttatactatctttcacactctctctttcatgtccccacac 687239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 158 - 299
Target Start/End: Complemental strand, 15184051 - 15183908
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  15184051 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 15183952  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||  |||||||||   ||||||||||||||||||||||    
T  15183951 ttttttatgctatctttcacactctctctttcatgtccccacac 15183908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 353
Target Start/End: Original strand, 15183133 - 15183308
Alignment:
Q  188 aaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatcatctctctt 285  Q
    ||||| ||| |||||| |||||||||||||||||||||||  |||||||||||||| | |||||||||| ||||||||| |||||||||   |||| |||    
T  15183133 aaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaaccactagattatttttttatactatctttcacactctcactt 15183232  T
Q  286 tcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    ||||||||||||        |||||||||||||||||||| ||| | ||||| || ||||||||||||||||||||    
T  15183233 tcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccattttgaccaccactgcaccacca 15183308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 158 - 291
Target Start/End: Original strand, 33001946 - 33002079
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattatt 257  Q
    |||||||||  |||| ||||| ||||||||||||| ||| |||||| ||||||||||||||||| | |||||||||||| |||||| |||||| ||||||    
T  33001946 tgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaatacattcttatcatattctctcaacactaaattatt 33002045  T
Q  258 ttttatattatctttcatcatctctctttcatgt 291  Q
    ||||| | |||||| || | ||||||||||||||    
T  33002046 ttttacactatcttccaccctctctctttcatgt 33002079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 686446 - 686573
Alignment:
Q  174 tttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctt 271  Q
    ||||| ||||||| ||||| ||| |||||| ||||||||||||||||| |||||| ||||||| |||||| | |||||||||| ||||||||| ||||||    
T  686446 tttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcctatcatattctctcaaccactagattatttttttatactatctt 686545  T
Q  272 tcatcatctctctttcatgtccccacac 299  Q
    |||   ||||||||||||||||||||||    
T  686546 tcacactctctctttcatgtccccacac 686573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 169 - 274
Target Start/End: Complemental strand, 12190181 - 12190075
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagattattttttatatta 267  Q
    |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||  |||||||||||||| | || |||||||||||||||||||    
T  12190181 agttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaatcattagattattttttatatta 12190082  T
Q  268 tctttca 274  Q
    |||||||    
T  12190081 tctttca 12190075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 289
Target Start/End: Original strand, 8204134 - 8204267
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||| ||||||||| |||| | ||||||||||     
T  8204134 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactatctcaaccactagattat 8204233  T
Q  256 ttttttatattatctttcatcatctctctttcat 289  Q
    ||||||||| |||||||||   ||||||||||||    
T  8204234 ttttttatactatctttcacactctctctttcat 8204267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 8040209 - 8040352
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| | | ||| ||||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||| | ||||| ||||     
T  8040209 tgggaaaggacagttctttcccatcgtgggaaagttgatcatgtccattagattaaatgaggaatatattcttatcatactctctcaaccactacattat 8040308  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||| |||||||||   ||||||||||||||||| ||||    
T  8040309 ttttttatactatctttcacactctctctttcatgtccctacac 8040352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 274
Target Start/End: Complemental strand, 36626653 - 36626546
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagattat-tttttatatt 266  Q
    |||| ||||| ||||||| ||||| ||| |||||| ||| ||||||| ||||| ||||||||||||||||||||| | ||||||||||| ||||||||||    
T  36626653 agttctttcccaccatgggaaagttgatcatgtccgttatattaaataaggaatatattcttatcatactctctcaaccactagattatatttttatatt 36626554  T
Q  267 atctttca 274  Q
    ||||||||    
T  36626553 atctttca 36626546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 8040478 - 8040360
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    ||||||||| || || ||||| ||| ||| |||||  || |||||| |||||||||||  ||||||||||  |||||||||||||| | ||||||||||     
T  8040478 tgggaaaggaaatttctttcccaccgtgggaaagttaatcatgtccattagattaaatagggaacatatttctatcatactctctcaaccactagattat 8040379  T
Q  256 ttttttatattatctttca 274  Q
    |||||||||||||||||||    
T  8040378 ttttttatattatctttca 8040360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 4555436 - 4555390
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaag 191  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||    
T  4555436 gtggcatttagtatgggaaagggaagttgtttcctaccatgggaaag 4555390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 6803949 - 6803988
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccat 184  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  6803949 gtggggtttagtatgggaaagggaagttgtttcctaccat 6803988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 16689594 - 16689641
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagt 192  Q
    ||||| |||||||||||||||||||||| ||||| |||||||||||||    
T  16689594 gtggggtttagtatgggaaagggaagttctttcccaccatggaaaagt 16689641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 9142048 - 9142094
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaag 191  Q
    |||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  9142048 gtggcatttagtatgggaaagggaagttgtttcccaccatgggaaag 9142094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 292
Target Start/End: Original strand, 42518813 - 42518899
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagattatt-ttttatattatctttcatcatctctctttcatgtc 292  Q
    |||||||||||||| |||| ||||||||| |||| |||| |||||| |||||| ||||||| ||| ||||| |  ||||||||||||||    
T  42518813 ttagattaaatgagaaacaaattcttatcgtactatctcaacactaaattattgttttatactatttttcacc--ctctctttcatgtc 42518899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 17767638 - 17767547
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcata 236  Q
    |||||||||| |||||||||||   ||||||||| ||||||| ||||| ||||  | || ||||||||| | | ||||||||| ||||||||    
T  17767638 gtgggatttaatatgggaaaggatcgttgtttcccaccatgggaaagtagatttagaccattagattaactaaagaacatatttttatcata 17767547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 33283226 - 33283276
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatta 255  Q
    |||||| |||||||||||| ||| |||||||||||||||  ||||||||||    
T  33283226 ttagatcaaatgaggaacacatttttatcatactctctcatcactagatta 33283276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 3739688 - 3739639
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  3739688 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 3739639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 33430103 - 33430152
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  33430103 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 33430152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 33685775 - 33685836
Alignment:
Q  174 tttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcat 235  Q
    ||||| |||||| |||||| |||||||||| ||||||||||||| ||| ||| | |||||||    
T  33685775 tttcccaccatgtaaaagttgattatgtccattagattaaatgaagaatatagtattatcat 33685836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 42408590 - 42408541
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  42408590 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 42408541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 6912217 - 6912268
Alignment:
Q  245 acactagattattttttatattatctttcatcatctctctttcatgtccccac 297  Q
    ||||||||||| |||| | ||||| ||||||| ||||||||||||||||||||    
T  6912217 acactagattaatttt-acattatatttcatcctctctctttcatgtccccac 6912268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 12201378 - 12201418
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatg 185  Q
    ||||| ||||||||||||||||  |||||||||||||||||    
T  12201378 gtggggtttagtatgggaaaggagagttgtttcctaccatg 12201418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 26712429 - 26712389
Alignment:
Q  151 tttagtatgggaaagggaagttgtttcctaccatggaaaag 191  Q
    ||||| |||||||||||||||||||||| ||||||| ||||    
T  26712429 tttagcatgggaaagggaagttgtttcccaccatgggaaag 26712389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 26982167 - 26982127
Alignment:
Q  151 tttagtatgggaaagggaagttgtttcctaccatggaaaag 191  Q
    ||||| |||||||||||||||||||||| ||||||| ||||    
T  26982167 tttagcatgggaaagggaagttgtttcccaccatgggaaag 26982127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 158 - 353
Target Start/End: Complemental strand, 26611317 - 26611112
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  26611317 tgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 26611218  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgca 347  Q
    ||||||||| ||||||| |   ||||||||||||||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||||||||    
T  26611217 ttttttatactatcttttacactctctctttcatgtccccacacactcataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgca 26611118  T
Q  348 ccacca 353  Q
    ||||||    
T  26611117 ccacca 26611112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 298
Target Start/End: Complemental strand, 36451474 - 36451320
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcc 244  Q
    ||||| ||||| ||||||||| | |||||||||  ||||||||||||| |||||||||| |||||||||||||  |||| || |||||| |||||||||     
T  36451474 gtggggtttagcatgggaaagaggagttgtttctcaccatggaaaagttgattatgtccattagattaaatgaaaaacaaatccttatcctactctctca 36451375  T
Q  245 acactagattatt-ttttatattatctttcatcatctctctttcatgtccccaca 298  Q
    ||||||||||||| ||||| | |||||| || |||||||||||||||||||||||    
T  36451374 acactagattattgttttacactatcttccaccatctctctttcatgtccccaca 36451320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 158 - 353
Target Start/End: Original strand, 10424137 - 10424342
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||| | ||||| ||| |||||| |||||||||||||||||||||||  |||||||||||||| | ||||||||||     
T  10424137 tgggaaaggagagttctttcccaccataggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaaccactagattat 10424236  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgca 347  Q
    ||||||||| |||||||||   ||||||||||||||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||||||||    
T  10424237 ttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgca 10424336  T
Q  348 ccacca 353  Q
    ||||||    
T  10424337 ccacca 10424342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 158 - 353
Target Start/End: Complemental strand, 29651366 - 29651161
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| || ||  |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  29651366 tgggaaaggagagttctttcccaccatgggaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 29651267  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgca 347  Q
    ||||||||| |||||||||   ||||||||||||||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||||||||    
T  29651266 ttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgca 29651167  T
Q  348 ccacca 353  Q
    ||||||    
T  29651166 ccacca 29651161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 11417701 - 11417844
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagattat 256  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | |||||||||||    
T  11417701 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 11417800  T
Q  257 -tttttatattatctttcatcatctctctttcatgtccccacac 299  Q
     |||||||| |||||||||   ||||||||||||||||||||||    
T  11417801 atttttatactatctttcacactctctctttcatgtccccacac 11417844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 158 - 353
Target Start/End: Complemental strand, 36865751 - 36865547
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| || ||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  36865751 tgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 36865652  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccac-------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcac 348  Q
    ||||||||| ||||||| |   ||||||||||||||||||||       |||||||| ||||||||||| ||| | |||||  | |||||||||||||||    
T  36865651 ttttttatactatcttttacactctctctttcatgtccccacacaccataccaccacaactaaatcacaaattcaacaaccactttgaccaccactgcac 36865552  T
Q  349 cacca 353  Q
    |||||    
T  36865551 cacca 36865547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 169 - 353
Target Start/End: Original strand, 26610370 - 26610565
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta--ttttttatat 265  Q
    |||| ||||| ||||||| ||| | ||| |||||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||  |||||||||     
T  26610370 agttctttcccaccatgggaaaattgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattattttttttatac 26610469  T
Q  266 tatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    |||||||||   ||||||||||||||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||| ||||||||||    
T  26610470 tatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccattgcaccacca 26610565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 169 - 353
Target Start/End: Complemental strand, 31836483 - 31836288
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta--ttttttatat 265  Q
    |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||  |||||||||||||| | ||||||||||  ||||||||||    
T  31836483 agttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaaccactagattattttttttatat 31836384  T
Q  266 tatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    |||||||||   ||||||||| ||| ||||||        |||||||||||||||||||| ||| | |||||  | ||||||||||||||||||||    
T  31836383 tatctttcacactctctcttttatgcccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgcaccacca 31836288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 160 - 353
Target Start/End: Complemental strand, 10425091 - 10424888
Alignment:
Q  160 ggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-tt 257  Q
    |||||||  |||| ||||| ||||||| ||||| ||| || ||| ||||||||||||||||| |||||| |||||||||||||| | |||||||||| ||    
T  10425091 ggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaatatattcctatcatactctctcaaccactagattattt 10424992  T
Q  258 ttttatattatctttcatcatctctctttcatgtc--------cccacaccaccaccactaaatcacagatttagcaacccttctgaccaccactgcacc 349  Q
    |||||||||||||||||   |||||||||||||||        |||| |||||||||||||||||| | ||| | |||||  | ||||||||||||||||    
T  10424991 ttttatattatctttcacactctctctttcatgtcccctcacacccataccaccaccactaaatcataaattcaacaaccactttgaccaccactgcacc 10424892  T
Q  350 acca 353  Q
    ||||    
T  10424891 acca 10424888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 169 - 353
Target Start/End: Original strand, 21165472 - 21165666
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatt-attttttatatt 266  Q
    |||| ||||| ||||||  ||||| ||| |||||| || ||||||||||||||||||||  |||||||||||||| | ||||||||| |||||||||| |    
T  21165472 agttctttcccaccatgagaaagttgatcatgtccatttgattaaatgaggaacatatttctatcatactctctcaaccactagattaattttttatact 21165571  T
Q  267 atctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    ||||||||   ||||||||||||||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||||||||||||||    
T  21165572 atctttcacagtctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgcaccacca 21165666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 169 - 299
Target Start/End: Complemental strand, 21166398 - 21166266
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatatt 266  Q
    |||| ||||| | ||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | |||||||||| ||||||||| |    
T  21166398 agttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattatttttttatact 21166299  T
Q  267 atctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||   ||||||||||||||||||||||    
T  21166298 atctttcacactctctctttcatgtccccacac 21166266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 169 - 299
Target Start/End: Original strand, 31835173 - 31835305
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagattat-tttttatatt 266  Q
    |||| ||||| ||||| | ||||| |||||||||| |||||||||| ||||||||||||| |||||||||||||| | ||||||||||| |||||||| |    
T  31835173 agttctttcccaccataggaaagttgattatgtccattagattaaacgaggaacatattcctatcatactctctcaaccactagattatctttttatact 31835272  T
Q  267 atctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||   ||||||||||||||||||||||    
T  31835273 atctttcacactctctctttcatgtccccacac 31835305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 9939402 - 9939287
Alignment:
Q  161 gaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttt 258  Q
    ||||||| |||| ||||| ||||||||||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | ||||| |||| |||    
T  9939402 gaaaggggagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactatattatttt 9939303  T
Q  259 tttatattatctttca 274  Q
    ||||||||||||||||    
T  9939302 tttatattatctttca 9939287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 169 - 349
Target Start/End: Original strand, 45230390 - 45230580
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatatt 266  Q
    |||| ||||| ||||||| ||||| ||| || | | |||||||||||||||||||||||| |||||||||||||| | |||||||||| ||||||||| |    
T  45230390 agttctttcccaccatgggaaagttgatcatattcattagattaaatgaggaacatattcctatcatactctctcaaccactagattatttttttatact 45230489  T
Q  267 atctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcacc 349  Q
    ||||||||   ||||||||||||||||||||        || ||||||||||||||||| ||| | |||||  | ||||||||||||||||    
T  45230490 atctttcacactctctctttcatgtccccacacacccatacgaccaccactaaatcacaaattcaacaaccactttgaccaccactgcacc 45230580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 11417971 - 11417852
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  11417971 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 11417872  T
Q  256 -ttttttatattatctttca 274  Q
     |||||||||||||||||||    
T  11417871 tttttttatattatctttca 11417852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 145 - 294
Target Start/End: Original strand, 25970107 - 25970253
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcc 244  Q
    ||||| ||||| ||||||||||| |||||||||| ||||||| ||||| || ||||||| |||||||||||||| |||| ||  ||||||||||||||      
T  25970107 gtggggtttagcatgggaaaggggagttgtttcccaccatgggaaagttga-tatgtccattagattaaatgagaaacaaatctttatcatactctct-- 25970203  T
Q  245 acactagattatt-ttttatattatctttcatcatctctctttcatgtccc 294  Q
     |||||||||||| ||||| | |||||| || |||||||||||||||||||    
T  25970204 -cactagattattgttttacactatcttccaccatctctctttcatgtccc 25970253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 188 - 353
Target Start/End: Original strand, 29650459 - 29650633
Alignment:
Q  188 aaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatcatctctctt 285  Q
    ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | |||||||||| ||||||||| |||||||||   ||||| ||    
T  29650459 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattatttttttatactatctttcacactctctttt 29650558  T
Q  286 tcatgtccccac-------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    ||||||||||||       || ||||||||||||||||| ||| | |||||  | || |||||||||||||||||    
T  29650559 tcatgtccccacacaccatacaaccaccactaaatcacaaattcaacaaccactttggccaccactgcaccacca 29650633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 169 - 299
Target Start/End: Complemental strand, 38143760 - 38143628
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatatt 266  Q
    |||| ||||| ||||||| ||||| | | |||||| |||||||||||||||||||||||| |||||||||||||| | |||||||||| ||||||||| |    
T  38143760 agttctttcccaccatgggaaagttggtcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattatttttttatact 38143661  T
Q  267 atctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||   |||||||||||||||| |||||    
T  38143660 atctttcacactctctctttcatgtcctcacac 38143628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 183 - 299
Target Start/End: Original strand, 9939161 - 9939279
Alignment:
Q  183 atggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatcatct 280  Q
    |||| ||||| ||| |||||| |||||||||||||| |||||||||||||||||||||||| | |||||||||| ||||||||| |||||||||   |||    
T  9939161 atgggaaagttgatcatgtccattagattaaatgagaaacatattcttatcatactctctcaaccactagattatttttttatactatctttcacattct 9939260  T
Q  281 ctctttcatgtccccacac 299  Q
    ||||||||| |||||||||    
T  9939261 ctctttcatatccccacac 9939279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 180 - 353
Target Start/End: Original strand, 39522411 - 39522594
Alignment:
Q  180 accatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatca 277  Q
    ||||||| ||||| ||| || ||| |||||||||||||||||||||||| |||||||||||||| | |||||||||| ||||||||| ||||||||        
T  39522411 accatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctcaaccactagattatttttttatactatctttcgcac 39522510  T
Q  278 tctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    || |||||||||||||||||        |||||||||||||||||||| ||| | |||||  | | ||||||||||||||||||    
T  39522511 tccctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccacttttaccaccactgcaccacca 39522594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 36864831 - 36864972
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||  ||||||  ||||| ||| |||||| |||||||||||||| ||||||||| |||||||||||||| | ||||||||||     
T  36864831 tgggaaaggagagttctttctcaccatgagaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctctcaaccactagattat 36864930  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||| ||||||||||   |||||||||||||||||||||    
T  36864931 ttttttatactatctttcat--actctctttcatgtccccacac 36864972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 169 - 299
Target Start/End: Complemental strand, 45235983 - 45235851
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatatt 266  Q
    |||| ||||| ||||||| |||||  || |||||| |||||||||||||||||||||||  ||||||| |||||| | |||||||||| ||||||||| |    
T  45235983 agttctttcccaccatgggaaagttaatcatgtccattagattaaatgaggaacatatttctatcatattctctcaaccactagattatttttttatact 45235884  T
Q  267 atctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||   ||||||||||||||||||||||    
T  45235883 atctttcacactctctctttcatgtccccacac 45235851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 38143532 - 38143620
Alignment:
Q  188 aaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttca 274  Q
    ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | |||||||||| |||||||||||||||||||    
T  38143532 aaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattatttttttatattatctttca 38143620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 274
Target Start/End: Original strand, 38694727 - 38694834
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatatt 266  Q
    |||| ||||| | ||||||||||| ||| || | | |||||||||||||||||||||||| |||||||||||||| | |||||||||| |||||||||||    
T  38694727 agttctttcccagcatggaaaagttgatcatattcattagattaaatgaggaacatattcctatcatactctctcaaccactagattatttttttatatt 38694826  T
Q  267 atctttca 274  Q
    ||||||||    
T  38694827 atctttca 38694834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 299
Target Start/End: Complemental strand, 38694988 - 38694842
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccac-actagattat 256  Q
    |||||||||  |||| ||||| ||||||  ||||| ||| |||||  ||||||||||||||||| |||||| |||||||||||||| || ||||||||||    
T  38694988 tgggaaaggagagttctttcccaccatgagaaagttgatcatgtctattagattaaatgaggaaaatattcatatcatactctctcaaccactagattat 38694889  T
Q  257 ttttta----tattatctttcatcatctctctttcatgtccccacac 299  Q
    |||||     || |||||||||   ||||||||||||||||||||||    
T  38694888 ttttttatactactatctttcacactctctctttcatgtccccacac 38694842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 291
Target Start/End: Complemental strand, 39523305 - 39523172
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattatt 257  Q
    |||||||||  |||| ||| | ||||||| ||||| ||| |||||| ||||||||||||||||| | ||  ||| ||||||||||| |||||| ||||||    
T  39523305 tgggaaaggagagttcttttccaccatgggaaagttgatcatgtccattagattaaatgaggaatacatctttaccatactctctcaacactaaattatt 39523206  T
Q  258 ttttatattatctttcatcatctctctttcatgt 291  Q
    ||||| | |||||| || | ||||||||||||||    
T  39523205 ttttacactatcttccaccctctctctttcatgt 39523172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 188 - 299
Target Start/End: Complemental strand, 17648148 - 17648036
Alignment:
Q  188 aaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattatt-ttttatattatctttcatcatctctcttt 286  Q
    ||||| |||||| ||| ||||||||||| || || | ||||||||| ||||||||| |||||| |||||| ||||| | |||||| |||| |||||||||    
T  17648148 aaagttgattatatccattagattaaataagaaataaattcttatcttactctctcaacactatattattgttttacactatcttccatcctctctcttt 17648049  T
Q  287 catgtccccacac 299  Q
    |||||||||||||    
T  17648048 catgtccccacac 17648036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 145 - 285
Target Start/End: Original strand, 36450729 - 36450871
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctc- 243  Q
    |||| |||||| ||||||||||| |||||||| | ||||||| ||||| |||||||||| || ||||||||||| |||| ||  ||||| |||||||||     
T  36450729 gtggtatttagcatgggaaaggggagttgttttccaccatgggaaagttgattatgtccattggattaaatgagtaacaaatctttatcctactctctca 36450828  T
Q  244 cacactagattatt-ttttatattatctttcatcatctctctt 285  Q
     |||||||||| || ||||| | |||||| || ||||||||||    
T  36450829 tacactagattgttgttttacactatcttccaccatctctctt 36450871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 287
Target Start/End: Complemental strand, 25970850 - 25970706
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctc- 243  Q
    |||| ||||||||||||||| || |||||||||| ||||||  ||||| |||||||||| ||  |||||||||| |||| ||  ||||| |||||||||     
T  25970850 gtggcatttagtatgggaaaagggagttgtttcccaccatgagaaagttgattatgtccattgaattaaatgagtaacaaatctttatcctactctctca 25970751  T
Q  244 cacactagattatt-ttttatattatctttcatcatctctctttc 287  Q
     |||||||||| || ||||| | |||||| || ||||||||||||    
T  25970750 tacactagattgttgttttacactatcttccaccatctctctttc 25970706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 250
Target Start/End: Complemental strand, 232096 - 231991
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaaca-tattcttatcatactctctc 243  Q
    ||||| |||||||||||||||||||||||||||| ||||||| |||||  ||| |  || ||||| ||||||||||||| |  |||||||||| ||||||    
T  232096 gtggggtttagtatgggaaagggaagttgtttcccaccatgggaaagtaaattttaaccattaga-taaatgaggaacattgatcttatcatagtctctc 231998  T
Q  244 cacacta 250  Q
    |||||||    
T  231997 cacacta 231991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 268
Target Start/End: Original strand, 11806145 - 11806215
Alignment:
Q  198 atgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattattttttatattat 268  Q
    |||||| ||||||||||||||||||| ||| ||||| ||||||||| ||||||| |||||||||| |||||    
T  11806145 atgtccattagattaaatgaggaacacatttttatcctactctctcaacactagtttattttttacattat 11806215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 297
Target Start/End: Original strand, 23383311 - 23383463
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcc 244  Q
    ||||| ||||| ||| ||||||  |||||||||| ||||||| |||||  ||| | ||| || ||| |||||| ||||| | |||||||||||||  ||     
T  23383311 gtggggtttagaatgagaaaggagagttgtttcccaccatgggaaagttaattttatccattcgatcaaatgaagaacacactcttatcatactccatca 23383410  T
Q  245 acactagattattttttatattatctttcatcatctctctttcatgtccccac 297  Q
    | ||||||||| |||||| | |||||| || | |||||||| |||||||||||    
T  23383411 atactagattaatttttacactatcttccaccctctctcttccatgtccccac 23383463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 3220575 - 3220631
Alignment:
Q  202 cctttagattaaatgaggaacatattcttatcatactctctccacactagattattt 258  Q
    ||||||||| |||| | ||||| |||||||| |||||||||||||||||||||||||    
T  3220575 cctttagatcaaatcaagaacacattcttataatactctctccacactagattattt 3220631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 231437 - 231484
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagt 192  Q
    ||||| |||||||||||||||||||||||||| ||||||||| |||||    
T  231437 gtggggtttagtatgggaaagggaagttgttttctaccatgggaaagt 231484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 3221414 - 3221358
Alignment:
Q  202 cctttagattaaatgaggaacatattcttatcatactctctccacactagattattt 258  Q
    ||||||||| |||| | ||||| |||||||| ||||||||||| |||||||||||||    
T  3221414 cctttagatcaaatcaagaacacattcttatgatactctctcctcactagattattt 3221358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 199060 - 199109
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  199060 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 199109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 5825395 - 5825444
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    |||||| |||||||||||| ||| ||||| ||||||||| ||||||||||    
T  5825395 ttagatcaaatgaggaacacattattatcctactctctcaacactagatt 5825444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 12640026 - 12640075
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  12640026 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 12640075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 20075586 - 20075635
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  20075586 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 20075635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 20422756 - 20422707
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  20422756 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 20422707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 25369844 - 25369893
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  25369844 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 25369893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 31876849 - 31876898
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  31876849 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 31876898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 32291076 - 32291125
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  32291076 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 32291125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 32449318 - 32449363
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaa 190  Q
    ||||||||||||||||||||||  | |||||||| |||||||||||    
T  32449318 gtgggatttagtatgggaaaggatacttgtttcccaccatggaaaa 32449363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 44932352 - 44932393
Alignment:
Q  151 tttagtatgggaaagggaagttgtttcctaccatggaaaagt 192  Q
    ||||| |||||||||||||||||||| |||||||| ||||||    
T  44932352 tttagcatgggaaagggaagttgttttctaccatgaaaaagt 44932393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 48091120 - 48091071
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  48091120 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 48091071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 52597736 - 52597687
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  52597736 ttagattaagtgaagaacatattcttaccatgctctctcaacactagatt 52597687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 55815886 - 55815935
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||||||| ||||||  ||||||||||    
T  55815886 ttagattaagtgaagaacatattcttatcatgctctcttaacactagatt 55815935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 297
Target Start/End: Complemental strand, 54453548 - 54453461
Alignment:
Q  209 attaaatgaggaacatattcttatcatactctctccacactagattattttttatattatctttcatcatctctctttcatgtccccac 297  Q
    ||||||| | |||||  ||||||||||||||  || ||||||||||| |||| | | ||||||| ||  ||||||||||||||||||||    
T  54453548 attaaataaagaacactttcttatcatactccttcaacactagattaatttt-acactatcttttattctctctctttcatgtccccac 54453461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 4e-35; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 169 - 353
Target Start/End: Original strand, 32536733 - 32536924
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccac-actagattatttttt-atatt 266  Q
    |||| ||||| ||||||| ||||| ||| |||||| |||||||||||| ||||||||||| |||||||||||||| || ||||||||||||||| ||| |    
T  32536733 agttctttcccaccatgggaaagttgatcatgtccattagattaaatggggaacatattcctatcatactctctcaaccactagattatttttttatact 32536832  T
Q  267 atctttcatcatctctctttcatgtccccacacc-----accaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    ||||||||   ||||||||||||||||||||||      ||||||||||||||||| ||| | |||||  | ||||||||||||||||||||    
T  32536833 atctttcacactctctctttcatgtccccacacacccataccaccactaaatcacaaattcaacaaccactttgaccaccactgcaccacca 32536924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 158 - 299
Target Start/End: Complemental strand, 34992298 - 34992155
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | ||||| ||||     
T  34992298 tgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactaaattat 34992199  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||| |||||||||   ||||||||||||||||||||||    
T  34992198 ttttttatactatctttcacactctctctttcatgtccccacac 34992155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 351
Target Start/End: Original strand, 38023662 - 38023841
Alignment:
Q  182 catggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatcatc 279  Q
    ||||||||||| ||| |||| | |||||||||||||||||||||||  |||||||||||||| | |||||||||| ||||||||| |||||||||   ||    
T  38023662 catggaaaagttgatcatgttcattagattaaatgaggaacatatttctatcatactctctcaaccactagattatttttttatactatctttcacactc 38023761  T
Q  280 tctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccac 351  Q
    ||||||||||||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||||||||||||    
T  38023762 tctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgcaccac 38023841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 353
Target Start/End: Original strand, 37639725 - 37639930
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| || | | |||||||||||||||||||||||| ||| |||||||||| | ||||||||||     
T  37639725 tgggaaaggagagttctttcccaccatgggaaagttgatcatattcattagattaaatgaggaacatattcctatgatactctctcaaccactagattat 37639824  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgca 347  Q
    ||||||||| |||||||||   ||||||||||||||||||||        ||||||||||||||||| || ||| | |||||  | ||||||||||||||    
T  37639825 ttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcgcaaattcaacaaccactttgaccaccactgca 37639924  T
Q  348 ccacca 353  Q
    ||||||    
T  37639925 ccacca 37639930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 41859324 - 41859467
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| ||||||||||||| |||||||||| |||||||||||||| | ||||||||||     
T  41859324 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccgttagattaaatgaagaacatattcatatcatactctctcaaccactagattat 41859423  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||| |||||||||   |||||||||||| |||||||||    
T  41859424 ttttttatactatctttcacactctctctttcatatccccacac 41859467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 198 - 353
Target Start/End: Complemental strand, 32537482 - 32537317
Alignment:
Q  198 atgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatcatctctctttcatgtcccc 295  Q
    |||||| ||| ||||||| ||||||||||||||||||||||||||| | |||||||||| ||||||||| ||||||||    ||||||||||||||||||    
T  32537482 atgtccattatattaaataaggaacatattcttatcatactctctcaaccactagattatttttttatactatctttcgcactctctctttcatgtcccc 32537383  T
Q  296 ac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    ||        |||||||||||||||||||| ||| | |||||  | ||||||||||||||||||||    
T  32537382 acacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgcaccacca 32537317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 183 - 299
Target Start/End: Complemental strand, 41860105 - 41859987
Alignment:
Q  183 atggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatcatct 280  Q
    |||||||||| ||| |||||| |||||||||||||||||||||||  ||||||||| |||| | ||||| |||| ||||||||| |||||||||   |||    
T  41860105 atggaaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactttctcaaccactatattatttttttatactatctttcacactct 41860006  T
Q  281 ctctttcatgtccccacac 299  Q
    |||||||||||||||||||    
T  41860005 ctctttcatgtccccacac 41859987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 158 - 291
Target Start/End: Complemental strand, 5035310 - 5035177
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattatt 257  Q
    |||||||||  |||| ||| | ||||| | ||||| ||| |||||| ||||||||||||||||| | ||||||||||||||||||| |||||| |||||     
T  5035310 tgggaaaggagagttcttttccaccataggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacactaaattatg 5035211  T
Q  258 ttttatattatctttcatcatctctctttcatgt 291  Q
    ||||| | |||||| || | ||||||||||||||    
T  5035210 ttttacactatcttccaccctctctctttcatgt 5035177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 34992051 - 34992147
Alignment:
Q  180 accatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttca 274  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||||  |||||||||||||| | ||||| |||| |||||||||||||||||||    
T  34992051 accatggaaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaaccactaaattatttttttatattatctttca 34992147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 5034912 - 5035031
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||| | ||||||| ||||| ||| |||||| ||||||| |||||||||||||||| |||||||||||||| | ||||||||||     
T  5034912 tgggaaaggagagttcttttccaccatgggaaagttgatcatgtccattagattgaatgaggaacatattcatatcatactctctcaaccactagattat 5035011  T
Q  256 ttttttatattatctttcat 275  Q
    ||||||||| ||||||||||    
T  5035012 ttttttatactatctttcat 5035031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 353
Target Start/End: Complemental strand, 38024502 - 38024360
Alignment:
Q  220 aacatattcttatcatactctctccac-actagattattttttatattatctttcatcatctctctttcatgtccccac--------accaccaccacta 310  Q
    ||||||||  |||||||||||||| || |||||||||||||||||| |||||||||   ||||||||||||||||||||        |||||||||| ||    
T  38024502 aacatatttctatcatactctctcaaccactagattattttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccatta 38024403  T
Q  311 aatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    ||||||| ||| | |||||  | ||||||||||||||||||||    
T  38024402 aatcacaaattcaacaaccactttgaccaccactgcaccacca 38024360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 7818535 - 7818584
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||||||| ||||||| ||||||||||    
T  7818535 ttagattaagtgaagaacatattcttatcatgctctctcaacactagatt 7818584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 10806009 - 10806058
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||||||| ||||||||||||| ||| ||||||| ||||||||||    
T  10806009 ttagattaaatgaagaacatattcttaacatgctctctcaacactagatt 10806058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 258
Target Start/End: Original strand, 40449480 - 40449585
Alignment:
Q  153 tagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactaga 252  Q
    |||||||||||||   ||||||||||||||||||||||||  ||| |  || ||| ||||||||||||||  | ||||||  || || ||| ||||||||    
T  40449480 tagtatgggaaagcagagttgtttcctaccatggaaaagtaaattttaaccattaaattaaatgaggaacgcactcttattttattccctcaacactaga 40449579  T
Q  253 ttattt 258  Q
    ||||||    
T  40449580 ttattt 40449585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 261
Target Start/End: Original strand, 35943077 - 35943193
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcc 244  Q
    ||||| ||||| |||||||||||||||||||||| |||||||  ||||   || ||||| ||  || ||||||| |||| | |||||||||  ||| ||     
T  35943077 gtggggtttagcatgggaaagggaagttgtttcccaccatggggaagttttttttgtccattgaatcaaatgagaaacacaatcttatcatggtctatca 35943176  T
Q  245 acactagattatttttt 261  Q
    ||||| |||||||||||    
T  35943177 acacttgattatttttt 35943193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 43924491 - 43924582
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcata 236  Q
    |||| ||||| | ||||||||||||||||||||| ||||||| ||||   ||| || || |||||||||||   ||||||||| ||||||||    
T  43924491 gtggcatttaatttgggaaagggaagttgtttcccaccatgggaaagctaattttgaccgttagattaaatagagaacatatttttatcata 43924582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 43925052 - 43924949
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattatt 257  Q
    ||||||||||||||||||||| ||||||  |||||  ||| || || |||||||||||   ||||||||| ||||||||  | ||| |||| ||||| ||    
T  43925052 tgggaaagggaagttgtttcccaccatgagaaagttaattttgaccgttagattaaatagagaacatatttttatcatagacactcaacaccagattttt 43924953  T
Q  258 tttt 261  Q
    ||||    
T  43924952 tttt 43924949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 40451033 - 40450955
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaaca 223  Q
    ||||| |||||||||||||| | ||||||||||| ||||||| |||||  ||| |  || |||||| ||||||||||||    
T  40451033 gtggggtttagtatgggaaatgtaagttgtttcccaccatgggaaagtaaattttaaccattagatcaaatgaggaaca 40450955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 16880543 - 16880494
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  16880543 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 16880494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 16889256 - 16889305
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||||||| |||| || ||||||||||    
T  16889256 ttagattaagtgaagaacatattcttatcatgctctttcaacactagatt 16889305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 16889853 - 16889804
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  16889853 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 16889804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 33114213 - 33114164
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  33114213 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 33114164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 40309525 - 40309476
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  40309525 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 40309476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 43591068 - 43591117
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||||||| ||||||||||||| |||  |||||| ||||||||||    
T  43591068 ttagattaaatgaagaacatattcttaacatgatctctcaacactagatt 43591117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 44062046 - 44062095
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  44062046 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 44062095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 12349981 - 12350013
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaa 190  Q
    ||||||||||||||||||||| |||||||||||    
T  12349981 tgggaaagggaagttgtttcccaccatggaaaa 12350013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 158 - 353
Target Start/End: Original strand, 33479710 - 33479916
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||  |||||||||||||| | ||||||||||     
T  33479710 tgggaaaggagagttatttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaaccactagattat 33479809  T
Q  256 -ttttttatattatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgc 346  Q
     ||||||||| |||||||||   ||||| ||||||||||||||        |||||||||||||||||||| ||| | |||||  | |||||||||||||    
T  33479810 tttttttatactatctttcacactctctatttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgc 33479909  T
Q  347 accacca 353  Q
    |||||||    
T  33479910 accacca 33479916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 158 - 353
Target Start/End: Complemental strand, 15083352 - 15083147
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||  ||||| ||| || ||  |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  15083352 tgggaaaggagagttctttcccaccatgagaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 15083253  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgca 347  Q
    ||||||||| |||||||||   ||||||||||||||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||||||||    
T  15083252 ttttttatactatctttcacactctctctttcatgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgca 15083153  T
Q  348 ccacca 353  Q
    ||||||    
T  15083152 ccacca 15083147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 158 - 299
Target Start/End: Complemental strand, 33480662 - 33480519
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  33480662 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 33480563  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||| |||||||||   |||||||||||||| |||||||    
T  33480562 ttttttatactatctttcacactctctctttcatgttcccacac 33480519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 353
Target Start/End: Original strand, 22579949 - 22580154
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||| | ||||||| ||||| ||| || ||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  22579949 tgggaaaggagagttcttttccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctcaatcactagattat 22580048  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccacac--------caccaccactaaatcacagatttagcaacccttctgaccaccactgca 347  Q
    ||||||||| |||||||||   ||||||||||||||||| ||||        |||||||||||||||||| ||| | ||||   | ||||||||||||||    
T  22580049 ttttttatactatctttcacactctctctttcatgtccctacacacccatatcaccaccactaaatcacaaattcaacaactactttgaccaccactgca 22580148  T
Q  348 ccacca 353  Q
    ||||||    
T  22580149 ccacca 22580154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 353
Target Start/End: Complemental strand, 22587344 - 22587139
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||  ||| |||||| ||| | ||||||||||     
T  22587344 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctattatactcactcaatcactagattat 22587245  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccac--------accaccaccactaaatcacagatttagcaacccttctgaccaccactgca 347  Q
    ||||||||| |||||||||   |||||||||| |||||||||        |||||||||||||||||||| ||| | |||||  | ||||||||||||||    
T  22587244 ttttttatactatctttcacactctctctttcctgtccccacacacccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgca 22587145  T
Q  348 ccacca 353  Q
    ||||||    
T  22587144 ccacca 22587139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 3542828 - 3542971
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||| | |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  3542828 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 3542927  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccacac 299  Q
    ||||||| | |||||||||   ||||||||||||||||||||||    
T  3542928 ttttttaaactatctttcacactctctctttcatgtccccacac 3542971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 182 - 353
Target Start/End: Original strand, 15082435 - 15082616
Alignment:
Q  182 catggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttcatcatc 279  Q
    ||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | |||||||||| ||||||||| |||||||||   ||    
T  15082435 catgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattatttttttatactatctttcacactc 15082534  T
Q  280 tctctttcatgtccc--cacacc------accaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    |||||||||||||||  ||||||      ||||||||||||||||| ||| | ||||   | ||||||||||||||||||||    
T  15082535 tctctttcatgtccctacacacccatacaaccaccactaaatcacaaattcaacaactactttgaccaccactgcaccacca 15082616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 3543097 - 3542979
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  3543097 tgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 3542998  T
Q  256 ttttttatattatctttca 274  Q
    |||||||||||||||||||    
T  3542997 ttttttatattatctttca 3542979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 33018181 - 33018324
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| | ||| | ||||| ||| |||||| ||||||||||||||||||||||| ||||||||||||||| | || |||||||     
T  33018181 tgggaaaggagagttctttcccatcattggaaagttgatcatgtccattagattaaatgaggaacatatttttatcatactctctcaaccattagattat 33018280  T
Q  256 ttttttatattatctttcatcatctctctttcatgtccccacac 299  Q
    ||||||||| |||||||||   ||||||||||||||||||||||    
T  33018281 ttttttatactatctttcacactctctctttcatgtccccacac 33018324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 274
Target Start/End: Complemental strand, 33018450 - 33018332
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||  |||||||||||||| | ||||||||||     
T  33018450 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaaccactagattat 33018351  T
Q  256 ttttttatattatctttca 274  Q
    ||||||||| |||||||||    
T  33018350 ttttttatactatctttca 33018332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 7193352 - 7193467
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagatta-t 256  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| || ||| |||||||||||||||||||||||||||||||||||||||   || |||||| |    
T  7193352 tgggaaaggagagttctttcccaccatgggaaagttgatcatctccattagattaaatgaggaacatattcttatcatactctctc--aaccagattatt 7193449  T
Q  257 tttttatattatctttca 274  Q
    |||||||| |||||||||    
T  7193450 tttttatactatctttca 7193467  T

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Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 7193588 - 7193494
Alignment:
Q  182 catggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttca 274  Q
    ||||| ||||| ||| || ||| ||||||||||||||||| |||||  |||||||||||||| | |||||||||| |||||||||||||||||||    
T  7193588 catgggaaagttgatcatatccattagattaaatgaggaatatatttctatcatactctctcaaccactagattatttttttatattatctttca 7193494  T

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Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 22582513 - 22582444
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatatt 227  Q
    |||||||||  |||| ||||| ||||||| ||||| ||| |||||| |||||||||||||||||||||||    
T  22582513 tgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatt 22582444  T

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Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 353
Target Start/End: Complemental strand, 22580713 - 22580653
Alignment:
Q  293 cccacaccaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    |||| |||||||||||||||||||| ||| | |||||  | ||||||||||||||||||||    
T  22580713 cccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgcaccacca 22580653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 6032778 - 6032729
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  6032778 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 6032729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 13944351 - 13944400
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||||||| ||||||||||||| |||  |||||| ||||||||||    
T  13944351 ttagattaaatgaagaacatattcttaacatgatctctcaacactagatt 13944400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 30610772 - 30610821
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  30610772 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 30610821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 30611370 - 30611321
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  30611370 ttagattaactgaagaacatattcttaacatgctctctcaacactagatt 30611321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 158 - 299
Target Start/End: Complemental strand, 194 - 50
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta- 255  Q
    |||||||||  |||| ||||| ||||||| ||||| |||||||| | |||||||||||||||||||||||| |||||||||||||| | ||||||||||     
T  194 tgggaaaggagagttctttcccaccatgggaaagttgattatgttcattagattaaatgaggaacatattcctatcatactctctcaaccactagattat 95  T
Q  256 -ttttttatattatctttcatcatctctctttcatgtccccacac 299  Q
     ||||||||| |||||||||   ||||||||||||||||||||||    
T  94 tttttttatactatctttcacactctctctttcatgtccccacac 50  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 66; Significance: 4e-29; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 158 - 291
Target Start/End: Original strand, 27235 - 27368
Alignment:
Q  158 tgggaaagggaagttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattatt 257  Q
    |||||||||  |||| ||||| | ||||| ||||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||| |||||| ||||||    
T  27235 tgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacacattcttatcatactctctcaacactaaattatt 27334  T
Q  258 ttttatattatctttcatcatctctctttcatgt 291  Q
    ||||| | |||||| || | ||||||||||||||    
T  27335 ttttacactatcttccaccctctctctttcatgt 27368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 353
Target Start/End: Complemental strand, 27502 - 27442
Alignment:
Q  293 cccacaccaccaccactaaatcacagatttagcaacccttctgaccaccactgcaccacca 353  Q
    |||| |||||||||||||||||||| ||| | |||||  | ||||||||||||||||||||    
T  27502 cccataccaccaccactaaatcacaaattcaacaaccactttgaccaccactgcaccacca 27442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 27598 - 27534
Alignment:
Q  169 agttgtttcctaccatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatc 233  Q
    |||| ||||| ||||||| ||||| ||| || ||| |||||||||||||||||||||||| ||||    
T  27598 agttttttcccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatc 27534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 9270 - 9174
Alignment:
Q  180 accatggaaaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctcca-cactagatta-ttttttatattatctttca 274  Q
    |||||||||||||  || |||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||| ||||||||| |||||||||    
T  9270 accatggaaaagttcatcatgtccattagattaaatgatgaacatattcttatcatactctctcaaccactagattatttttttatactatctttca 9174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 188 - 299
Target Start/End: Original strand, 5363 - 5472
Alignment:
Q  188 aaagtcgattatgtcctttagattaaatgaggaacatattcttatcatactctctccacactagattattttttatattatctttcatcatctctctttc 287  Q
    ||||| |||||| ||| |||||||||||||| |||| ||||||||| |||||| |||| |||||||||||||||||  |||||| || || |||||||||    
T  5363 aaagtagattatatccattagattaaatgagaaacacattcttatcctactctttccatactagattattttttatgatatcttcca-ca-ctctctttc 5460  T
Q  288 atgtccccacac 299  Q
    ||||||||||||    
T  5461 atgtccccacac 5472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 14013 - 14058
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaa 190  Q
    ||||||||||| ||||||||||| |||||||||| |||||||||||    
T  14013 gtgggatttagcatgggaaaggggagttgtttcccaccatggaaaa 14058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 90673 - 90729
Alignment:
Q  202 cctttagattaaatgaggaacatattcttatcatactctctccacactagattattt 258  Q
    ||||||||| |||| |  |||| |||||||| |||||||||||||||||||||||||    
T  90673 cctttagatcaaatcaaaaacacattcttataatactctctccacactagattattt 90729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2003 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold2003
Description:

Target: scaffold2003; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 578 - 531
Alignment:
Q  145 gtgggatttagtatgggaaagggaagttgtttcctaccatggaaaagt 192  Q
    |||||||| || ||||||||||| |||||||||| |||||||||||||    
T  578 gtgggattaagcatgggaaaggggagttgtttcccaccatggaaaagt 531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 11326 - 11375
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagatt 254  Q
    ||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||    
T  11326 ttagattaagtgaagaacatattcttaacatgctctctcaacactagatt 11375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 94311 - 94367
Alignment:
Q  205 ttagattaaatgaggaacatattcttatcatactctctccacactagattatttttt 261  Q
    ||||||||  ||||||||| ||||||||| ||||| || || |||||||||||||||    
T  94311 ttagattaggtgaggaacacattcttatcctactcacttcatactagattatttttt 94367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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