View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9381_low_32 (Length: 325)
Name: NF9381_low_32
Description: NF9381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9381_low_32 |
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Alignment Details
Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 35 - 295
Target Start/End: Original strand, 10842969 - 10843231
Alignment:
| Q |
35 |
tttatttagtgactattagattagataaaactcatcttcaagcactcatcttcactaaccaaaa-actttatggtctgcaatcttttacatacacaagaa |
133 |
Q |
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| T |
10842969 |
tttatttagtgactattagattagataaaactcatcttcaagcactcatcttcactaaccaaaaaactttatggtctgcaatctttttcatacacaagaa |
10843068 |
T |
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| Q |
134 |
agaggcattgacagtgataagtatacttcaccttcaatatacatccacataataattcataattaaaatcctcaaacgaaaacgatttcgt-gaaggaaa |
232 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
10843069 |
agaggcattgacagtgataagtatacttcaccttcaatatacatccacataataattcataattaaaatcctcaaacgaaaacgatttcgtcgaaggaaa |
10843168 |
T |
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| Q |
233 |
gaatccaaaacaataaaaacaagttcttcaacatctatgtggacatgaaatttcagagaacaa |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
10843169 |
gaatccaaaacaataaaaacaagttcttcaacatctatgtggacatgaaatctcagagaacaa |
10843231 |
T |
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