View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9382_high_1 (Length: 269)
Name: NF9382_high_1
Description: NF9382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9382_high_1 |
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Alignment Details
Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 34 - 252
Target Start/End: Original strand, 42454501 - 42454718
Alignment:
| Q |
34 |
gagagggtcatcttttttatactcgcaattttacttctgttgtatatatggtatacaattttcaagtgggtgggaatggggtgattttttccagaacata |
133 |
Q |
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| T |
42454501 |
gagagggtcatcttttttatactcgcaattttacttctgttgtatatatggtatacaattttcaagtgggtgggaatggggtgatttttcccagaacata |
42454600 |
T |
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| Q |
134 |
ctttctcttttcgattactttgtatcctcttccttcggtaagaaacattggaaatgcttaattcttatttgacacacaattgttttgaaaattttgtgac |
233 |
Q |
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| T |
42454601 |
ctttcccttttcgattactttgtatcctcctccttcggtaagaaacattggaaatgcttaattcttctttgacacacaatt-ctttgaaaaatttgtgac |
42454699 |
T |
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| Q |
234 |
gcaagaaattccaaggatg |
252 |
Q |
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| T |
42454700 |
gcaagaaattccaaggatg |
42454718 |
T |
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