View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9383_low_14 (Length: 241)
Name: NF9383_low_14
Description: NF9383
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9383_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 12 - 223
Target Start/End: Complemental strand, 30008393 - 30008182
Alignment:
| Q |
12 |
cagagaccaaatttggaagcgaatttatcggtacggtcgaagaagaatttgtagcatcaaatacttcatcaaccttttgatcagacttcaagcaactact |
111 |
Q |
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|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30008393 |
cagaaaccaaatttggaagcgaatttatcggtaccgtcgaagaagaatttgtagcatcaaatacttcatcaaccttttgatcagacttcaagcaactact |
30008294 |
T |
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| Q |
112 |
actattgctgctgccaccattatccataaactgatatccattgcttaaaacttgttgcatctgaggtacttgaaagctttgaaagttgcactgattttga |
211 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30008293 |
actgttgctgctgccaccattatccataaactgatatccattgcttaaaacttgttgcatctgaggtacttgaaagctttgaaagttgcactgattttga |
30008194 |
T |
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| Q |
212 |
gaagcaaagttg |
223 |
Q |
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|||||||||||| |
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| T |
30008193 |
gaagcaaagttg |
30008182 |
T |
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