View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9387_high_4 (Length: 290)
Name: NF9387_high_4
Description: NF9387
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9387_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 34110656 - 34110928
Alignment:
| Q |
1 |
gcataaccagtttatgattttggttactacttcaacagctcaactagtgttatttactacctaactggttaatgaagctcttctttttgtttgtaacaac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34110656 |
gcataaccagtttatgattttggttactacttcaacagctcaactagtgttatttactacctaactggttaatgaagctcttctttttgtttgtaacaac |
34110755 |
T |
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| Q |
101 |
aattagtgctaattgaaaaaacattaggaatatatatctgctctactctacctatattagtgctcatcatatgatcctttaacggatgatctatatgtta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
34110756 |
aattagtgctaattgaaaaaacattaggaatatatatctgctctactctacctatattactgctcatcatatgatcctttaacggatgatctatatgtta |
34110855 |
T |
|
| Q |
201 |
agcaactttttgttatgcaagatgaaagataactacgagtgcatactgcatgcttatgacaaatgaagtttgt |
273 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34110856 |
agcaactttttgttatgcaaaatgaaagataactacgagtgcatactgcatgcttatgacaaatgaagtttgt |
34110928 |
T |
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