View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9388A_low_156 (Length: 256)
Name: NF9388A_low_156
Description: NF9388A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9388A_low_156 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 38243753 - 38244002
Alignment:
| Q |
1 |
attcaactatacaaacatcattcatcatcaatttcttcttctatnnnnnnnnngtaacaaacaataaatgaaattaaagaagagaaatgagtttgatgat |
100 |
Q |
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| T |
38243753 |
attcaactataaaaacatcattcatcatcaatttcttcttctataaaaaaaaagtaacaaacaataaatgaaattaaagaagagaaatgagtttgatgat |
38243852 |
T |
|
| Q |
101 |
aggaactgacgggtttttgatagaaatggaacaaggaaggaccaaggaactgtttacgcttggcgaaaacttcatcggcggatggtccataatacggatg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
38243853 |
aggaactgacgggtttttgatagaaatggaacaaggaaggaccaaggaactgtttacgcttggagaaaacttcatcggcggatggtccataatacggatg |
38243952 |
T |
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| Q |
201 |
aggttggtgatcgaaaggcggtatctgcggcggtggcgtagtaatggttt |
250 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
38243953 |
aggttggtgatcgaacggcggtatctgcggcggtggcgtagtaatggttt |
38244002 |
T |
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