View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9388A_low_162 (Length: 253)
Name: NF9388A_low_162
Description: NF9388A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9388A_low_162 |
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Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 4 - 233
Target Start/End: Complemental strand, 45929717 - 45929488
Alignment:
| Q |
4 |
aagaaacaaagagtagaaaactgcttgctcaaaaagataggacaattttttatctcacagcagaaggacaagagcactattatgagtgaagcattggcat |
103 |
Q |
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| T |
45929717 |
aagaaataaagagtagaaaactgcttgctcaaaaagataggactattttttatctcacagcagaaggacaagagcactattatgagtgaagcattggcat |
45929618 |
T |
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| Q |
104 |
aaaataaatacatatcatatcaccaattcagacaagtgtgttttcaatgacctaacctcaaacataagattgtactttccatcccggtttctcattctca |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45929617 |
aaaataaatacatatcatatcaccaattcagacaagtgtgttttcaatgacctaacctcaaacataagattgtactttccatcccggtttctcattctca |
45929518 |
T |
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| Q |
204 |
aatatgattgacatgcttcagggtcttctc |
233 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
45929517 |
aatatgattgacatgcttcagggtcttctc |
45929488 |
T |
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