View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9388A_low_185 (Length: 248)
Name: NF9388A_low_185
Description: NF9388A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9388A_low_185 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 9698915 - 9699138
Alignment:
| Q |
6 |
agtatcatagagaaaatggttccaagactaatttattttcgatcagaaggtaactaaagtttgactgcgaattgtttcatcatcagaaactaaccatcct |
105 |
Q |
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| T |
9698915 |
agtatcatagagaaaatggttttaagactaatttattttcgatcagaaggtaactaaagtttgactgcgaattgtttcatcatcagaaactaaccattct |
9699014 |
T |
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| Q |
106 |
tttagatgatgcacattaaccactcgcgtctagcgaattcagattcactactgtaactacattatgtagttgcacacagtaaataattttgaccatgaga |
205 |
Q |
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| T |
9699015 |
tttagatgatgcacattaaccactcgcgtctagcgaattcagattcactactgtaactacattatgtagttgcacacagtaaataattttgaccatgaga |
9699114 |
T |
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| Q |
206 |
tctttagacaacttagattgcatc |
229 |
Q |
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| T |
9699115 |
tcattagacaacttagattgcatc |
9699138 |
T |
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