View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9388A_low_186 (Length: 248)

Name: NF9388A_low_186
Description: NF9388A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9388A_low_186
NF9388A_low_186
[»] chr1 (4 HSPs)
chr1 (1-247)||(29442596-29442842)
chr1 (54-247)||(29452588-29452781)
chr1 (1-247)||(29467062-29467308)
chr1 (65-247)||(29423944-29424126)
[»] chr2 (14 HSPs)
chr2 (55-247)||(14551040-14551231)
chr2 (78-231)||(8572754-8572910)
chr2 (106-231)||(10372653-10372778)
chr2 (106-227)||(9292699-9292820)
chr2 (83-231)||(9316770-9316921)
chr2 (162-241)||(17565357-17565436)
chr2 (145-231)||(10336621-10336707)
chr2 (154-231)||(9329418-9329495)
chr2 (104-227)||(10353914-10354037)
chr2 (155-242)||(12011835-12011922)
chr2 (146-231)||(9283427-9283512)
chr2 (161-231)||(10348629-10348699)
chr2 (164-228)||(7114901-7114965)
chr2 (155-247)||(7612716-7612808)
[»] chr8 (1 HSPs)
chr8 (55-231)||(41965975-41966154)
[»] scaffold0667 (1 HSPs)
scaffold0667 (64-231)||(5185-5355)
[»] chr4 (1 HSPs)
chr4 (106-231)||(26575650-26575775)
[»] chr3 (1 HSPs)
chr3 (106-231)||(37463293-37463418)
[»] chr5 (1 HSPs)
chr5 (160-240)||(36225575-36225655)


Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-128; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 29442842 - 29442596
Alignment:
Q  1 gcagagaaggccgttacatgaacctagaagagacatgcggtagataggacctgtgaaaggaatgttgagtttaacgccggtggttaggttagagaaatca 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  29442842 gcagagaaggccgttacatgaacctagaagagacatgcggttgatgggacctgtgaaaggaatgttgagtttaacgccggtggttaggttagagaaatct 29442743  T
Q  101 tcgatttggtagaaatcaaagttgtgtcgaaggattaaggaacgattgaggaaattttggaggtgaagtttgatgaagttatgggaatcgattagggatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29442742 tcgatttggtagaaatcaaagttgtgtcgaaggattaaggaacgattgaggaaattttggaggtgaagtttgatgaagttatgggaatcgattagggatt 29442643  T
Q  201 gcagtgatttcgacgttgaacggaatcggaggagggattgtgccggt 247  Q
    | |||||||||||||||||||||||||||||||||||||||||||||    
T  29442642 gaagtgatttcgacgttgaacggaatcggaggagggattgtgccggt 29442596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 54 - 247
Target Start/End: Complemental strand, 29452781 - 29452588
Alignment:
Q  54 tgaaaggaatgttgagtttaacgccggtggttaggttagagaaatcatcgatttggtagaaatcaaagttgtgtcgaaggattaaggaacgattgaggaa 153  Q
    |||||||||  |||||||||| || ||||||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||||||| |    
T  29452781 tgaaaggaagattgagtttaatgcgggtggttaggttagagaaatcgttgatttggtagaaaacagagttgtgtcgaaggattaaggaacgattgaggga 29452682  T
Q  154 attttggaggtgaagtttgatgaagttatgggaatcgattagggattgcagtgatttcgacgttgaacggaatcggaggagggattgtgccggt 247  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| |||||    
T  29452681 attttggaggtgaagtttgatgaagttgtgagaatcgattagggattgaagtgattttgaggttgaacggaatcggaggagggattgtaccggt 29452588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 29467308 - 29467062
Alignment:
Q  1 gcagagaaggccgttacatgaacctagaagagacatgcggtagataggacctgtgaaaggaatgttgagtttaacgccggtggttaggttagagaaatca 100  Q
    |||||||||||||||||||||||| |  ||||| |||  || | | ||   | |||||||||  |||||||||| || |||||||||||||||||||||     
T  29467308 gcagagaaggccgttacatgaaccgaacagagagatgaagttgttggggattttgaaaggaagattgagtttaatgcgggtggttaggttagagaaatcg 29467209  T
Q  101 tcgatttggtagaaatcaaagttgtgtcgaaggattaaggaacgattgaggaaattttggaggtgaagtttgatgaagttatgggaatcgattagggatt 200  Q
    | |||||||||||||||  |||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||    
T  29467208 ttgatttggtagaaatcggagttgtgtcgaaggattaagaaacgattgagggaatttcggaggtgaagtttgatgaagttgtgggaatcgattagggatt 29467109  T
Q  201 gcagtgatttcgacgttgaacggaatcggaggagggattgtgccggt 247  Q
    | |||||||| || ||||||||||||||||||||||||||| |||||    
T  29467108 gaagtgattttgaggttgaacggaatcggaggagggattgtaccggt 29467062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 65 - 247
Target Start/End: Original strand, 29423944 - 29424126
Alignment:
Q  65 ttgagtttaacgccggtggttaggttagagaaatcatcgatttggtagaaatcaaagttgtgtcgaaggattaaggaacgattgaggaaattttggaggt 164  Q
    |||||||||||| |||| ||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||| | |||| |||||||    
T  29423944 ttgagtttaacggcggtagttaggttagagaaatcgttgatttggtagaaatcagagttgtgtcgaaggattaaggaacgattgaaggaattatggaggt 29424043  T
Q  165 gaagtttgatgaagttatgggaatcgattagggattgcagtgatttcgacgttgaacggaatcggaggagggattgtgccggt 247  Q
    |||| ||||||||| | |||||||||||||| ||||| |||||||| || ||||||||||||||||||||||||||| |||||    
T  29424044 gaagcttgatgaagctgtgggaatcgattagagattgaagtgattttgaggttgaacggaatcggaggagggattgtaccggt 29424126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 4e-50; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 247
Target Start/End: Original strand, 14551040 - 14551231
Alignment:
Q  55 gaaaggaatgttgagtttaacgccggtggttaggttagagaaatcatcgatttggtagaaatcaaagttgtgtcgaaggattaaggaacgattgaggaaa 154  Q
    ||||||||  |||||||||| || ||||||||||||||||||||| | ||||||||||| ||   | |||||||||||||||||||||| ||||||| ||    
T  14551040 gaaaggaagattgagtttaatgcgggtggttaggttagagaaatcgttgatttggtagagattggacttgtgtcgaaggattaaggaacaattgagggaa 14551139  T
Q  155 ttttggaggtgaagtttgatgaagttatgggaatcgattagggattgcagtgatttcgacgttgaacggaatcggaggagggattgtgccggt 247  Q
    ||||  |||||||||||||||||||| |||||||||||||||||||| |||||||| || ||||| |||||| ||||||||||||||| ||||    
T  14551140 ttttt-aggtgaagtttgatgaagttgtgggaatcgattagggattgaagtgattttgaagttgatcggaattggaggagggattgtggcggt 14551231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 78 - 231
Target Start/End: Complemental strand, 8572910 - 8572754
Alignment:
Q  78 cggtggttaggttagagaaat---catcgatttggtagaaatcaaagttgtgtcgaaggattaaggaacgattgaggaaattttggaggtgaagtttgat 174  Q
    |||||||||| | ||||||||   ||||||||||||||| |||  ||||| |||||| ||||||||||||||||||| |||||| ||||||||| ||| |    
T  8572910 cggtggttagatcagagaaatcatcatcgatttggtagatatcgtagttgcgtcgaatgattaaggaacgattgagggaatttttgaggtgaaggttggt 8572811  T
Q  175 gaagttatgggaatcgattagggattgcagtgatttcgacgttgaacggaatcggag 231  Q
    |||||| |||||||||||||  ||||  |||||||| || ||||| |||||||||||    
T  8572810 gaagttgtgggaatcgattatagatttaagtgattttgaagttgatcggaatcggag 8572754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 10372653 - 10372778
Alignment:
Q  106 ttggtagaaatcaaagttgtgtcgaaggattaaggaacgattgaggaaattttggaggtgaagtttgatgaagttatgggaatcgattagggattgcagt 205  Q
    |||||||| ||| || ||| || ||||||||||||| ||||||||| |||||||||||||||| |||||||| || |||||||||||||  ||||  | |    
T  10372653 ttggtagagatcgaatttgcgttgaaggattaaggatcgattgagggaattttggaggtgaaggttgatgaatttgtgggaatcgattaatgatttaaat 10372752  T
Q  206 gatttcgacgttgaacggaatcggag 231  Q
    ||||| || ||||| |||||||||||    
T  10372753 gattttgaagttgatcggaatcggag 10372778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 227
Target Start/End: Original strand, 9292699 - 9292820
Alignment:
Q  106 ttggtagaaatcaaagttgtgtcgaaggattaaggaacgattgaggaaattttggaggtgaagtttgatgaagttatgggaatcgattagggattgcagt 205  Q
    |||||||| ||| || |||||||||||||||||||| || |||||| |||||| ||||||||| ||  ||||| | || ||||||||||||||||  |||    
T  9292699 ttggtagagatcgaatttgtgtcgaaggattaaggatcggttgagggaatttttgaggtgaaggttagtgaagctgtgagaatcgattagggatttaagt 9292798  T
Q  206 gatttcgacgttgaacggaatc 227  Q
    ||||| ||  |||| |||||||    
T  9292799 gattttgaaattgatcggaatc 9292820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 9316770 - 9316921
Alignment:
Q  83 gttaggttagagaaatcatcgatttggtagaaatcaaagttgtgtcgaaggattaaggaacgattgaggaaatt---ttggaggtgaagtttgatgaagt 179  Q
    ||||||| || ||||||||||||||||||||  ||  | ||||   ||||||||||||| ||||||||| ||||   || ||||||||| ||||||||||    
T  9316770 gttaggtcagggaaatcatcgatttggtagagttcggatttgtaatgaaggattaaggatcgattgagggaattatttttgaggtgaaggttgatgaagt 9316869  T
Q  180 tatgggaatcgattagggattgcagtgatttcgacgttgaacggaatcggag 231  Q
    | || ||||| ||||  ||||  |||||||| || ||||| |||||||||||    
T  9316870 tgtgagaatctattaaagatttaagtgattttgaagttgatcggaatcggag 9316921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 17565436 - 17565357
Alignment:
Q  162 ggtgaagtttgatgaagttatgggaatcgattagggattgcagtgatttcgacgttgaacggaatcggaggagggattgt 241  Q
    ||||||| ||| |||||||||||||||| ||||   |||  ||||||||||||||||| |||| ||||||||||||||||    
T  17565436 ggtgaaggttggtgaagttatgggaatcaattaaaaatttaagtgatttcgacgttgatcggagtcggaggagggattgt 17565357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 10336621 - 10336707
Alignment:
Q  145 attgaggaaattttggaggtgaagtttgatgaagttatgggaatcgattagggattgcagtgatttcgacgttgaacggaatcggag 231  Q
    ||||||| ||||||| |||||||| |||||||| || || |||||||||| |||||  |||||||| || ||||| |||||||||||    
T  10336621 attgagggaattttgaaggtgaaggttgatgaatttgtgagaatcgattaaggatttaagtgattttgaggttgatcggaatcggag 10336707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 9329418 - 9329495
Alignment:
Q  154 attttggaggtgaagtttgatgaagttatgggaatcgattagggattgcagtgatttcgacgttgaacggaatcggag 231  Q
    ||||| ||||||||| ||  ||||||| ||||||||||||| |||||  |||||||| || |||||||||||||||||    
T  9329418 atttttgaggtgaaggttagtgaagttgtgggaatcgattatggatttaagtgattttgaagttgaacggaatcggag 9329495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 227
Target Start/End: Original strand, 10353914 - 10354037
Alignment:
Q  104 atttggtagaaatcaaagttgtgtcgaaggattaaggaacgattgaggaaattttggaggtgaagtttgatgaagttatgggaatcgattagggattgca 203  Q
    |||||||||| ||| || |||  |||||| ||||||||  ||||| || |||||  ||||||||| |||||||| || | |||||||||||||||||  |    
T  10353914 atttggtagatatcgaatttgaatcgaagaattaaggattgattgggggaatttctgaggtgaaggttgatgaatttgttggaatcgattagggatttaa 10354013  T
Q  204 gtgatttcgacgttgaacggaatc 227  Q
     |||||| || ||||| |||||||    
T  10354014 atgattttgaagttgatcggaatc 10354037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 12011922 - 12011835
Alignment:
Q  155 ttttggaggtgaagtttgatgaagttatgggaatcgattagggattgcagtgatttcgacgttgaacggaatcggaggagggattgtg 242  Q
    |||| ||||||||| ||| ||||||| || |||||||||| |||||  |||||||| || ||||| ||||||||||| || |||||||    
T  12011922 tttttgaggtgaagattggtgaagttgtgagaatcgattatggatttaagtgattttgaagttgagcggaatcggagaagtgattgtg 12011835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 9283512 - 9283427
Alignment:
Q  146 ttgaggaaattttggaggtgaagtttgatgaagttatgggaatcgattagggattgcagtgatttcgacgttgaacggaatcggag 231  Q
    |||||| || ||| ||||||||| |||||||| || || ||||| ||||||||| | |||||||| || ||||| |||||||||||    
T  9283512 ttgagggaacttttgaggtgaaggttgatgaatttgtgagaatctattagggatcgaagtgatttagaagttgatcggaatcggag 9283427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 10348629 - 10348699
Alignment:
Q  161 aggtgaagtttgatgaagttatgggaatcgattagggattgcagtgatttcgacgttgaacggaatcggag 231  Q
    |||||||| |||||||| ||  |||||||||||| |||||  |||||||| || ||||| |||||||||||    
T  10348629 aggtgaaggttgatgaatttgagggaatcgattaaggatttaagtgattttgaggttgatcggaatcggag 10348699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 7114965 - 7114901
Alignment:
Q  164 tgaagtttgatgaagttatgggaatcgattagggattgcagtgatttcgacgttgaacggaatcg 228  Q
    ||||| |||||||| || ||||||||||||| |||||  |||||||| || ||||| ||||||||    
T  7114965 tgaaggttgatgaatttgtgggaatcgattaaggatttaagtgattttgaagttgatcggaatcg 7114901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 247
Target Start/End: Original strand, 7612716 - 7612808
Alignment:
Q  155 ttttggaggtgaagtttgatgaagttatgggaatcgattagggattgcagtgatttcgacgttgaacggaatcggaggagggattgtgccggt 247  Q
    |||| ||||||||| ||  ||||||| |||||||| |||| |||||  || ||||| ||  |||| |||||||||||||||| |||| |||||    
T  7612716 tttttgaggtgaaggtttgtgaagttgtgggaatcaattaaggatttaagcgatttagaaattgatcggaatcggaggagggtttgtaccggt 7612808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 55 - 231
Target Start/End: Complemental strand, 41966154 - 41965975
Alignment:
Q  55 gaaaggaatgttgagtttaacgccggtggttaggttagagaaatc---atcgatttggtagaaatcaaagttgtgtcgaaggattaaggaacgattgagg 151  Q
    |||||||  |||||||  |||| ||||||||||||||||||||||   |||||  ||||||| ||||  |||| |||||||||||||||| |||||||||    
T  41966154 gaaaggatggttgagtggaacggcggtggttaggttagagaaatcctcatcgaactggtagagatcagtgttgagtcgaaggattaaggatcgattgagg 41966055  T
Q  152 aaattttggaggtgaagtttgatgaagttatgggaatcgattagggattgcagtgatttcgacgttgaacggaatcggag 231  Q
     | |||  ||||||||| ||||||||||| ||||||||||||| |||| | ||||||||||| ||||| |||||||||||    
T  41966054 gattttctgaggtgaaggttgatgaagttgtgggaatcgattaaggatcgaagtgatttcgaggttgatcggaatcggag 41965975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0667 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 231
Target Start/End: Original strand, 5185 - 5355
Alignment:
Q  64 gttgagtttaacgccggtggttaggttagagaaatcatc---gatttggtagaaatcaaagttgtgtcgaaggattaaggaacgattgaggaaattttgg 160  Q
    |||||||  |||| ||||||| ||||| |||||||||||   ||||||||||| ||   |  || |||||||||| ||||| | ||||||| |||||| |    
T  5185 gttgagtggaacggcggtggtgaggtttgagaaatcatcttcgatttggtagatattggatctgagtcgaaggatgaaggatctattgagggaatttttg 5284  T
Q  161 aggtgaagtttgatgaagttatgggaatcgattagggattgcagtgatttcgacgttgaacggaatcggag 231  Q
     ||||||| ||||||||||| || |||||||||| |||||  |||||||| || ||||| |||||||||||    
T  5285 cggtgaaggttgatgaagttgtgagaatcgattatggatttaagtgattttgaagttgatcggaatcggag 5355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 26575650 - 26575775
Alignment:
Q  106 ttggtagaaatcaaagttgtgtcgaaggattaaggaacgattgaggaaattttggaggtgaagtttgatgaagttatgggaatcgattagggattgcagt 205  Q
    |||||||| ||| || |||  ||||||||||||||| |||||| || |||||  ||||||||| |||||||| || | ||||||||||| | |||  |||    
T  26575650 ttggtagatatcgaatttgaatcgaaggattaaggatcgattgggggaatttctgaggtgaaggttgatgaatttgtaggaatcgattaagaatttaagt 26575749  T
Q  206 gatttcgacgttgaacggaatcggag 231  Q
    ||||| || ||||| |||||||||||    
T  26575750 gattttgaagttgatcggaatcggag 26575775  T

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Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 37463293 - 37463418
Alignment:
Q  106 ttggtagaaatcaaagttgtgtcgaaggattaaggaacgattgaggaaattttggaggtgaagtttgatgaagttatgggaatcgattagggattgcagt 205  Q
    |||||||| |||  |||||| ||||| ||||| |||  ||||||||  ||||| ||| ||||| ||||||||||| || ||||||||||  ||||  |||    
T  37463293 ttggtagatatcggagttgtttcgaatgattacggattgattgaggggatttttgagatgaaggttgatgaagttgtgagaatcgattaaagatttaagt 37463392  T
Q  206 gatttcgacgttgaacggaatcggag 231  Q
    ||||| || ||||| |||||||||||    
T  37463393 gattttgaagttgatcggaatcggag 37463418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 36225575 - 36225655
Alignment:
Q  160 gaggtgaagtttgatgaagttatgggaatcgattagggattgcagtgatttcgacgttgaacggaatcggaggagggattg 240  Q
    ||||||||| ||  ||||||| || ||||||||||  ||||  |||||||| || ||||| ||||||||||||||||||||    
T  36225575 gaggtgaagattagtgaagttgtgcgaatcgattaacgatttaagtgattttgaagttgatcggaatcggaggagggattg 36225655  T

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