View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9388A_low_215 (Length: 243)
Name: NF9388A_low_215
Description: NF9388A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9388A_low_215 |
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Alignment Details
Target: chr1 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 32 - 197
Target Start/End: Complemental strand, 21075132 - 21074967
Alignment:
| Q |
32 |
atgactacacttggttaccttgttatcgatgattcctagcataattctattacttcatccaagatcctagcgtttatactatcaccttactatatagtga |
131 |
Q |
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| T |
21075132 |
atgactacacatggttaccttgttatcaatgattcctagcataattctattacttcatcgatgatcctagcatgtatactatcactttactatatagtga |
21075033 |
T |
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| Q |
132 |
atgaatttttataattttcaattgcagttcagacactttactataccaaaacctaacattatcatt |
197 |
Q |
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| T |
21075032 |
aggaatttttataactttcgattgtagttcagacactttactataccaaaacctaacattttcatt |
21074967 |
T |
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