View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9388A_low_305 (Length: 204)
Name: NF9388A_low_305
Description: NF9388A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9388A_low_305 |
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Alignment Details
Target: chr2 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 22 - 183
Target Start/End: Original strand, 25931947 - 25932108
Alignment:
| Q |
22 |
tccaagaatatcgtaacactggttatcactatcatccacactgtccaatataacttgttcattgctatctccatcatatcacccctctctctttttgtgc |
121 |
Q |
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| T |
25931947 |
tccaacaatattataacactggttatcactatcatccacactgtccaatataacttgttcattgctatctccatgatatcacccctctctctttttgtgc |
25932046 |
T |
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| Q |
122 |
tcacactgaaatgtttgatttatactcccgagttttatacacttttactatttgacaagtgt |
183 |
Q |
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| T |
25932047 |
tcacactgaaatgtttgatttatactctcaaattttatacactttttctatttgacaagtgt |
25932108 |
T |
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