View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9388A_low_79 (Length: 321)
Name: NF9388A_low_79
Description: NF9388A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9388A_low_79 |
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Alignment Details
Target: chr6 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 10 - 298
Target Start/End: Original strand, 3238964 - 3239250
Alignment:
| Q |
10 |
atatgaatgattgaagattggtatttgattataagaatacaaagatgattaattaatttgttgtcatattaatgtggagattaagaaaattgttaagggt |
109 |
Q |
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| T |
3238964 |
atatgaatgattgaagattggtatttgattataagaatacaaagatgattaattaatttgttgtcatattaatgtggagattaagaaaattgttaagggt |
3239063 |
T |
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| Q |
110 |
aaacatgatcagagaaaaaataaataaaacaataggagtacctttgaagagaattaagatgttgaaggagctataaaaacattgaaatgaggaagatggt |
209 |
Q |
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| T |
3239064 |
aaacatgatcagagataaaataaataaaacaataggagtacctttgaagagaattaagacgttgaaggagctataaaaacattgaaatgaggaagatggt |
3239163 |
T |
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| Q |
210 |
tattccttcaaatccagaagccattgattttggatccatttctcatcattatatgaaacttcttttgatatagggaatgttattgatca |
298 |
Q |
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| T |
3239164 |
tattccttcaaatccagaagccattgattttggatccatttctcatcat--tatgaaacttcttttgatatagggaatgttattgatca |
3239250 |
T |
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