View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9388A_low_97 (Length: 305)
Name: NF9388A_low_97
Description: NF9388A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9388A_low_97 |
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Alignment Details
Target: chr8 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 7 - 290
Target Start/End: Original strand, 44891010 - 44891293
Alignment:
| Q |
7 |
caaactactgcttcctcaaaaaactagtttaatttcttgatattaaacagataaaaacgtacactacactttgatcttagccaaaagaccaagaaaaggt |
106 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44891010 |
caaactgctgcttcctcaaaaaactagtttaatttcttgatattaaacagataaaaacgtacactacactttgatcttagccaaaagaccaagaaaaggt |
44891109 |
T |
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| Q |
107 |
ggagaaaggtatgaattacatgtggtactcacttccacttttatatcatacatccatttactcactctcttgactacacgatgtaggactaactagtatt |
206 |
Q |
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|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44891110 |
ggagaaaggtatgaattatatgtggtactcacttctacttttatatcatacatccatttactcactctcttgactacacgatgtaggactaactagtatt |
44891209 |
T |
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| Q |
207 |
gttcagcaccaatttgcttcgtggactcacttggtagactatattcagtctttcttctcttatctatattcgttttcttccaat |
290 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44891210 |
gttcagcaccaacttgcttcgtggactcacttggtagactatattcagtctttcttctcttatctatattcgttttcttccaat |
44891293 |
T |
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