View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9388A_low_99 (Length: 302)

Name: NF9388A_low_99
Description: NF9388A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9388A_low_99
NF9388A_low_99
[»] chr3 (58 HSPs)
chr3 (1-99)||(17653747-17653845)
chr3 (1-97)||(37508956-37509052)
chr3 (1-99)||(10298014-10298112)
chr3 (1-97)||(4238629-4238725)
chr3 (1-97)||(49823380-49823476)
chr3 (1-96)||(19557052-19557147)
chr3 (4-99)||(40690993-40691088)
chr3 (1-96)||(48340432-48340527)
chr3 (1-98)||(8817384-8817481)
chr3 (1-89)||(22721966-22722054)
chr3 (1-97)||(51406708-51406804)
chr3 (1-96)||(2787832-2787927)
chr3 (1-96)||(34080030-34080125)
chr3 (1-96)||(44785396-44785491)
chr3 (1-91)||(9111499-9111589)
chr3 (2-96)||(38964428-38964522)
chr3 (1-91)||(42507360-42507450)
chr3 (1-97)||(8437460-8437556)
chr3 (1-97)||(46208065-46208161)
chr3 (1-96)||(21295326-21295421)
chr3 (1-96)||(6013336-6013431)
chr3 (1-99)||(36095677-36095775)
chr3 (1-86)||(42170356-42170441)
chr3 (1-84)||(33942944-33943027)
chr3 (1-96)||(35513508-35513603)
chr3 (41-99)||(44785471-44785529)
chr3 (41-98)||(4238592-4238649)
chr3 (42-99)||(9027139-9027196)
chr3 (41-98)||(21295401-21295458)
chr3 (41-98)||(22721929-22721986)
chr3 (41-98)||(34080105-34080162)
chr3 (41-97)||(19557127-19557183)
chr3 (41-97)||(49823456-49823512)
chr3 (41-100)||(9111569-9111628)
chr3 (41-96)||(10297979-10298034)
chr3 (41-99)||(8817461-8817519)
chr3 (41-98)||(2787907-2787964)
chr3 (41-98)||(8437423-8437480)
chr3 (41-98)||(38964390-38964447)
chr3 (41-98)||(42170421-42170478)
chr3 (41-98)||(42507430-42507487)
chr3 (41-97)||(46208029-46208085)
chr3 (41-96)||(17653712-17653767)
chr3 (41-96)||(37508921-37508976)
chr3 (41-96)||(48340397-48340452)
chr3 (41-96)||(51406673-51406728)
chr3 (42-96)||(2131748-2131802)
chr3 (42-99)||(9213513-9213570)
chr3 (32-96)||(34988140-34988205)
chr3 (41-98)||(40691071-40691128)
chr3 (41-97)||(36095755-36095811)
chr3 (41-96)||(5323282-5323337)
chr3 (41-96)||(9213591-9213646)
chr3 (46-97)||(34988074-34988125)
chr3 (41-96)||(35513473-35513528)
chr3 (41-84)||(43323072-43323115)
chr3 (41-90)||(33128212-33128261)
chr3 (42-98)||(45652067-45652123)
[»] chr5 (39 HSPs)
chr5 (1-96)||(23359977-23360072)
chr5 (1-99)||(41989404-41989502)
chr5 (1-98)||(9395385-9395482)
chr5 (1-97)||(36563537-36563633)
chr5 (1-98)||(13103059-13103156)
chr5 (1-97)||(11795203-11795299)
chr5 (1-96)||(37148955-37149050)
chr5 (1-98)||(13033086-13033183)
chr5 (1-97)||(21575981-21576077)
chr5 (2-96)||(6126860-6126954)
chr5 (5-97)||(17025663-17025755)
chr5 (7-97)||(37641995-37642085)
chr5 (1-98)||(26350348-26350445)
chr5 (1-96)||(20848109-20848203)
chr5 (1-91)||(4443995-4444085)
chr5 (1-76)||(583024-583099)
chr5 (41-98)||(37149030-37149087)
chr5 (41-96)||(9395350-9395405)
chr5 (17-82)||(2366352-2366418)
chr5 (41-99)||(17025621-17025679)
chr5 (41-99)||(36563613-36563671)
chr5 (41-98)||(582987-583044)
chr5 (41-98)||(20848072-20848129)
chr5 (41-97)||(13033050-13033106)
chr5 (41-97)||(13103023-13103079)
chr5 (41-97)||(23359941-23359997)
chr5 (41-97)||(41989482-41989538)
chr5 (41-96)||(11795168-11795223)
chr5 (41-99)||(4443957-4444015)
chr5 (52-98)||(37641951-37641997)
chr5 (25-91)||(966206-966273)
chr5 (30-84)||(9006894-9006949)
chr5 (41-96)||(26350425-26350480)
chr5 (17-90)||(3549553-3549627)
chr5 (52-89)||(13539949-13539986)
chr5 (41-89)||(27081015-27081063)
chr5 (43-99)||(35584450-35584506)
chr5 (17-87)||(35904449-35904518)
chr5 (25-88)||(36595782-36595846)
[»] chr2 (47 HSPs)
chr2 (1-100)||(3055593-3055692)
chr2 (1-99)||(37990010-37990108)
chr2 (1-98)||(41478637-41478734)
chr2 (1-97)||(44398721-44398817)
chr2 (1-96)||(13197710-13197805)
chr2 (1-96)||(15896877-15896972)
chr2 (1-98)||(9047753-9047850)
chr2 (1-98)||(16243781-16243878)
chr2 (1-97)||(38917521-38917617)
chr2 (1-97)||(44397582-44397678)
chr2 (1-96)||(12337937-12338032)
chr2 (1-96)||(15372261-15372356)
chr2 (17-98)||(6648517-6648599)
chr2 (1-98)||(37666608-37666705)
chr2 (1-98)||(41492894-41492991)
chr2 (1-97)||(13344519-13344615)
chr2 (1-96)||(16044317-16044412)
chr2 (1-97)||(30099181-30099277)
chr2 (17-91)||(44804583-44804658)
chr2 (17-98)||(12170397-12170479)
chr2 (1-77)||(4683951-4684027)
chr2 (41-99)||(41478714-41478772)
chr2 (41-98)||(37990088-37990145)
chr2 (41-97)||(3055557-3055613)
chr2 (41-97)||(4684007-4684063)
chr2 (41-97)||(15896841-15896897)
chr2 (41-97)||(44397546-44397602)
chr2 (41-97)||(44398685-44398741)
chr2 (41-96)||(13197785-13197840)
chr2 (41-96)||(16044392-16044447)
chr2 (17-91)||(16734833-16734908)
chr2 (41-96)||(37666685-37666740)
chr2 (52-99)||(13344481-13344528)
chr2 (55-96)||(6648608-6648649)
chr2 (41-98)||(15372224-15372281)
chr2 (41-98)||(23227347-23227404)
chr2 (41-97)||(16243858-16243914)
chr2 (41-97)||(38917597-38917653)
chr2 (41-96)||(13724102-13724157)
chr2 (52-94)||(30099268-30099310)
chr2 (41-99)||(40714017-40714075)
chr2 (41-90)||(31150659-31150708)
chr2 (41-97)||(9047830-9047886)
chr2 (52-96)||(12338023-12338067)
chr2 (42-82)||(20900678-20900718)
chr2 (42-86)||(36688892-36688936)
chr2 (17-56)||(41453109-41453149)
[»] chr8 (52 HSPs)
chr8 (2-100)||(39571199-39571297)
chr8 (1-98)||(7785776-7785873)
chr8 (1-97)||(54611-54707)
chr8 (1-97)||(2890161-2890257)
chr8 (1-96)||(6552690-6552785)
chr8 (1-99)||(12763651-12763749)
chr8 (1-98)||(7805697-7805794)
chr8 (1-98)||(44498185-44498282)
chr8 (1-97)||(25600999-25601095)
chr8 (1-97)||(43199353-43199449)
chr8 (1-96)||(3304278-3304373)
chr8 (1-96)||(31654648-31654743)
chr8 (2-101)||(33289256-33289355)
chr8 (2-104)||(7012207-7012309)
chr8 (1-99)||(32114472-32114570)
chr8 (1-99)||(32211360-32211458)
chr8 (1-90)||(12343146-12343235)
chr8 (1-99)||(15888349-15888447)
chr8 (1-81)||(13578892-13578972)
chr8 (17-98)||(27422240-27422322)
chr8 (41-93)||(28463614-28463666)
chr8 (41-99)||(4245656-4245714)
chr8 (41-98)||(54687-54744)
chr8 (41-98)||(2890237-2890294)
chr8 (41-98)||(7785853-7785910)
chr8 (41-98)||(7805774-7805831)
chr8 (17-97)||(8587220-8587301)
chr8 (41-97)||(43199429-43199485)
chr8 (41-96)||(3304353-3304408)
chr8 (41-96)||(6552655-6552710)
chr8 (41-96)||(8587170-8587225)
chr8 (41-96)||(12343215-12343270)
chr8 (41-96)||(15888427-15888482)
chr8 (41-96)||(32114550-32114605)
chr8 (41-96)||(44498262-44498317)
chr8 (52-97)||(32211449-32211494)
chr8 (41-97)||(12763729-12763785)
chr8 (41-97)||(25601075-25601131)
chr8 (41-96)||(31654613-31654668)
chr8 (41-96)||(39571278-39571333)
chr8 (50-96)||(7012171-7012217)
chr8 (42-88)||(15688038-15688084)
chr8 (45-91)||(17006916-17006962)
chr8 (45-91)||(17570285-17570331)
chr8 (41-98)||(33289336-33289393)
chr8 (17-89)||(24691986-24692058)
chr8 (43-91)||(30171487-30171535)
chr8 (42-100)||(24692054-24692112)
chr8 (17-89)||(13246801-13246874)
chr8 (17-97)||(28463661-28463742)
chr8 (41-97)||(13578856-13578912)
chr8 (42-98)||(33057592-33057648)
[»] chr7 (43 HSPs)
chr7 (1-98)||(1738445-1738542)
chr7 (1-98)||(7240784-7240881)
chr7 (1-97)||(9268791-9268887)
chr7 (1-96)||(46840895-46840990)
chr7 (1-98)||(7482260-7482357)
chr7 (1-98)||(38063911-38064008)
chr7 (1-96)||(22285734-22285829)
chr7 (1-96)||(23314139-23314234)
chr7 (1-96)||(31319399-31319494)
chr7 (1-96)||(38441495-38441590)
chr7 (1-90)||(33418411-33418500)
chr7 (1-98)||(36583430-36583527)
chr7 (1-97)||(1565728-1565824)
chr7 (1-96)||(94318-94413)
chr7 (1-86)||(36016206-36016291)
chr7 (1-97)||(4790283-4790379)
chr7 (1-97)||(28536750-28536846)
chr7 (17-89)||(40840126-40840199)
chr7 (1-96)||(9575444-9575539)
chr7 (41-100)||(46840856-46840915)
chr7 (41-99)||(1565804-1565862)
chr7 (41-98)||(1738522-1738579)
chr7 (41-98)||(7240747-7240804)
chr7 (41-97)||(7482224-7482280)
chr7 (41-97)||(28536826-28536882)
chr7 (41-97)||(38063988-38064044)
chr7 (41-96)||(23314214-23314269)
chr7 (41-96)||(31319474-31319529)
chr7 (41-96)||(36583395-36583450)
chr7 (41-98)||(9268754-9268811)
chr7 (41-98)||(22285697-22285754)
chr7 (26-89)||(7269412-7269476)
chr7 (41-96)||(94393-94448)
chr7 (42-97)||(7661152-7661207)
chr7 (41-96)||(36016271-36016326)
chr7 (41-96)||(38441460-38441515)
chr7 (52-97)||(4790247-4790292)
chr7 (49-89)||(29993251-29993291)
chr7 (42-89)||(46877666-46877713)
chr7 (42-96)||(7269481-7269535)
chr7 (49-99)||(9575406-9575456)
chr7 (41-98)||(24710744-24710801)
chr7 (68-100)||(7107751-7107783)
[»] chr6 (42 HSPs)
chr6 (1-98)||(26602358-26602455)
chr6 (1-97)||(6330150-6330246)
chr6 (1-97)||(11572144-11572240)
chr6 (1-97)||(13853592-13853688)
chr6 (1-96)||(2830370-2830465)
chr6 (1-96)||(8382969-8383064)
chr6 (1-99)||(8099565-8099663)
chr6 (1-97)||(35031000-35031096)
chr6 (1-100)||(33052790-33052889)
chr6 (17-99)||(9644746-9644829)
chr6 (17-99)||(9650763-9650846)
chr6 (1-96)||(8417793-8417888)
chr6 (1-97)||(6068601-6068697)
chr6 (2-85)||(28747145-28747228)
chr6 (1-89)||(6143589-6143677)
chr6 (1-96)||(17992023-17992118)
chr6 (18-97)||(22896513-22896593)
chr6 (23-97)||(3788093-3788168)
chr6 (41-98)||(8383044-8383101)
chr6 (41-98)||(33052869-33052926)
chr6 (41-97)||(2830334-2830390)
chr6 (41-97)||(8099529-8099585)
chr6 (41-97)||(11572220-11572276)
chr6 (41-96)||(6330115-6330170)
chr6 (41-96)||(26602323-26602378)
chr6 (41-98)||(13853668-13853725)
chr6 (41-97)||(6143553-6143609)
chr6 (41-97)||(35031076-35031132)
chr6 (26-84)||(7596989-7597048)
chr6 (42-88)||(8186443-8186489)
chr6 (41-91)||(14936532-14936582)
chr6 (41-98)||(6068564-6068621)
chr6 (55-96)||(9644696-9644737)
chr6 (55-96)||(9650713-9650754)
chr6 (41-90)||(31849586-31849635)
chr6 (52-96)||(13043758-13043802)
chr6 (41-100)||(8186365-8186424)
chr6 (1-58)||(13043793-13043850)
chr6 (41-98)||(8417868-8417925)
chr6 (55-96)||(22896471-22896512)
chr6 (69-101)||(22880912-22880944)
chr6 (69-101)||(22898847-22898879)
[»] chr1 (48 HSPs)
chr1 (1-98)||(14984872-14984969)
chr1 (1-96)||(27159358-27159453)
chr1 (1-96)||(31842795-31842890)
chr1 (1-96)||(39401966-39402061)
chr1 (1-96)||(44668093-44668188)
chr1 (1-91)||(9981682-9981772)
chr1 (1-97)||(47216698-47216794)
chr1 (1-96)||(11795968-11796063)
chr1 (1-96)||(26471065-26471160)
chr1 (1-96)||(47777481-47777576)
chr1 (1-99)||(1050923-1051021)
chr1 (1-99)||(34042731-34042829)
chr1 (1-98)||(12483626-12483723)
chr1 (1-90)||(44955212-44955301)
chr1 (1-97)||(17556787-17556884)
chr1 (2-97)||(25694355-25694450)
chr1 (1-98)||(47588335-47588432)
chr1 (1-98)||(47969730-47969827)
chr1 (1-76)||(23278021-23278096)
chr1 (17-100)||(11897104-11897188)
chr1 (42-97)||(16448184-16448239)
chr1 (19-96)||(11989833-11989911)
chr1 (50-99)||(11795930-11795979)
chr1 (41-98)||(12483703-12483760)
chr1 (41-98)||(26471140-26471197)
chr1 (41-98)||(27159433-27159490)
chr1 (17-97)||(37552191-37552272)
chr1 (41-98)||(44668168-44668225)
chr1 (17-89)||(1598389-1598460)
chr1 (41-97)||(9981646-9981702)
chr1 (42-97)||(11897053-11897108)
chr1 (41-100)||(14984833-14984892)
chr1 (41-96)||(31842870-31842925)
chr1 (41-96)||(39402041-39402096)
chr1 (41-96)||(47216774-47216829)
chr1 (50-96)||(1050888-1050934)
chr1 (52-97)||(34042695-34042740)
chr1 (52-96)||(23278087-23278131)
chr1 (41-96)||(44955281-44955336)
chr1 (41-96)||(47777556-47777611)
chr1 (17-86)||(12213484-12213554)
chr1 (17-90)||(16448114-16448188)
chr1 (41-98)||(47588412-47588469)
chr1 (69-99)||(9302041-9302071)
chr1 (41-97)||(12213549-12213605)
chr1 (49-97)||(17556751-17556799)
chr1 (42-90)||(21537945-21537993)
chr1 (69-97)||(39720788-39720816)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-96)||(49540-49635)
scaffold0009 (41-99)||(49502-49560)
[»] chr4 (58 HSPs)
chr4 (1-96)||(47833646-47833741)
chr4 (2-96)||(6121893-6121987)
chr4 (1-90)||(5986911-5987000)
chr4 (1-98)||(33621831-33621928)
chr4 (1-98)||(47838615-47838712)
chr4 (1-98)||(48336298-48336395)
chr4 (1-97)||(3904682-3904778)
chr4 (1-97)||(3993011-3993107)
chr4 (1-97)||(53337405-53337501)
chr4 (1-96)||(3372156-3372251)
chr4 (1-96)||(20538686-20538781)
chr4 (1-96)||(42797767-42797862)
chr4 (1-96)||(46797760-46797855)
chr4 (1-98)||(41469764-41469861)
chr4 (1-97)||(24704405-24704501)
chr4 (1-96)||(43900584-43900679)
chr4 (1-96)||(51894582-51894677)
chr4 (17-98)||(3422110-3422192)
chr4 (4-96)||(7579348-7579440)
chr4 (1-97)||(52756710-52756806)
chr4 (2-91)||(40913194-40913283)
chr4 (1-89)||(41615683-41615771)
chr4 (1-77)||(33551236-33551312)
chr4 (41-98)||(3372119-3372176)
chr4 (41-98)||(3992974-3993031)
chr4 (41-90)||(17236863-17236912)
chr4 (1-77)||(26231612-26231688)
chr4 (41-98)||(47833609-47833666)
chr4 (41-98)||(48336261-48336318)
chr4 (41-97)||(33551200-33551256)
chr4 (41-96)||(20538761-20538816)
chr4 (41-96)||(24704370-24704425)
chr4 (41-96)||(53337370-53337425)
chr4 (42-96)||(4780371-4780425)
chr4 (51-97)||(26231576-26231622)
chr4 (41-99)||(43900546-43900604)
chr4 (41-98)||(42797730-42797787)
chr4 (41-97)||(3904758-3904814)
chr4 (41-97)||(7579309-7579365)
chr4 (41-97)||(47838692-47838748)
chr4 (50-98)||(51894666-51894714)
chr4 (41-96)||(6121968-6122023)
chr4 (17-99)||(17344263-17344346)
chr4 (19-96)||(29845697-29845769)
chr4 (41-96)||(46797725-46797780)
chr4 (17-83)||(50430431-50430498)
chr4 (26-91)||(45478151-45478217)
chr4 (1-65)||(25855118-25855182)
chr4 (41-97)||(40913264-40913320)
chr4 (41-96)||(52756675-52756730)
chr4 (42-96)||(1716301-1716355)
chr4 (41-99)||(41469841-41469899)
chr4 (46-96)||(44900080-44900130)
chr4 (41-97)||(25855082-25855138)
chr4 (41-97)||(33621795-33621851)
chr4 (42-90)||(41594660-41594708)
chr4 (71-99)||(47866032-47866060)
chr4 (41-81)||(50430493-50430533)
[»] scaffold0482 (2 HSPs)
scaffold0482 (1-98)||(12895-12992)
scaffold0482 (41-98)||(12858-12915)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-98)||(23820-23917)
scaffold0204 (41-98)||(23783-23840)
[»] scaffold0464 (2 HSPs)
scaffold0464 (1-98)||(6129-6226)
scaffold0464 (50-96)||(6215-6261)
[»] scaffold1707 (2 HSPs)
scaffold1707 (1-84)||(1370-1453)
scaffold1707 (41-97)||(1334-1390)
[»] scaffold0011 (1 HSPs)
scaffold0011 (17-100)||(231299-231383)
[»] scaffold0415 (1 HSPs)
scaffold0415 (19-96)||(13731-13804)
[»] scaffold0650 (1 HSPs)
scaffold0650 (17-80)||(1-65)


Alignment Details
Target: chr3 (Bit Score: 84; Significance: 6e-40; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 17653747 - 17653845
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17653747 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 17653845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 37508956 - 37509052
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37508956 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 37509052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 10298014 - 10298112
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10298014 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 10298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 4238629 - 4238725
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4238629 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 49823476 - 49823380
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49823476 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 49823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19557147 - 19557052
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19557147 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 40691088 - 40690993
Alignment:
Q  4 aacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40691088 aacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 40690993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 48340432 - 48340527
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  48340432 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8817481 - 8817384
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  8817481 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaaggagtatt 8817384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22721966 - 22722054
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccgga 89  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22721966 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccgga 22722054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 51406708 - 51406804
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  51406708 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 51406804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 2787927 - 2787832
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  2787927 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 34080125 - 34080030
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34080125 gtcaacaaaagtgaat-gtatttggactgaatttttaacaagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 44785491 - 44785396
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  44785491 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaaccggaggaagta 44785396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 9111589 - 9111499
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggagg 91  Q
    |||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9111589 gtcaacaaaagtgaat-gtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagg 9111499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 38964428 - 38964522
Alignment:
Q  2 tcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  38964428 tcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 42507450 - 42507360
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggagg 91  Q
    |||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42507450 gtcaacaaaagtgaat-gtatttggactgaattttgaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagg 42507360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 8437460 - 8437556
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  8437460 gtcaataaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagtat 8437556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 46208065 - 46208161
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  46208065 gtcaacaaaagtgaat-gtatttggactgaatttttaaatagatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 21295421 - 21295326
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  21295421 gtcaacaaaagtgaat-gtatttggactgaatttttaattagatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 6013431 - 6013336
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  6013431 gtcaacaaaagtgaat-gtatttggactgaatttttaactagataaatttacttttgttgacccaaaattctcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 36095775 - 36095677
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| ||||||||  |||||||    
T  36095775 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttgtaaataagaccggagtgagtattt 36095677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 42170441 - 42170356
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggacc 86  Q
    |||||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  42170441 gtcaacaaaagtgaat-gtatttggagtgaatttttaaccagatacatcaacttttgttgacccaaaattctcttataaataggacc 42170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 33943027 - 33942944
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaatagga 84  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  33943027 gtcaacaaaagttaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctcttataaatagga 33942944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 35513508 - 35513603
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||| ||||| |||| ||| |||||| |||||||||||| |||||| ||||    
T  35513508 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaccttttattgatccagaattcttttataaataggatcggagggagta 35513603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 44785471 - 44785529
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  44785471 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 44785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 4238649 - 4238592
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  4238649 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 4238592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 9027196 - 9027139
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||||| |||||||    
T  9027196 atacatcaacttttgttgacccaactttatcttataaataggaccggagggagtattt 9027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 21295401 - 21295458
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  21295401 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 21295458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 22721986 - 22721929
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  22721986 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 22721929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 34080105 - 34080162
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  34080105 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 34080162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 19557127 - 19557183
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  19557127 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 19557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 49823456 - 49823512
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  49823456 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 49823512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 100
Target Start/End: Original strand, 9111569 - 9111628
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatttg 100  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  9111569 aatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtatttg 9111628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 10298034 - 10297979
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  10298034 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 8817461 - 8817519
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||| |||||||||||    
T  8817461 aatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtattt 8817519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 2787907 - 2787964
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  2787907 aatacattcacttttgttgacctaaatttctcttataaataggaccggagatagtatt 2787964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 8437480 - 8437423
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  |||||| |||||| ||| |||||||||||||||||||||||||||||||    
T  8437480 aatacattcacttttattgacctaaatttctcttataaataggaccggaggtagtatt 8437423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 38964447 - 38964390
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||| | ||| |||||||||||||||||||||||||||||||    
T  38964447 aatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagtatt 38964390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 42170421 - 42170478
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  42170421 aatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatt 42170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 42507430 - 42507487
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  42507430 aatacattcacttttgttgacctaaatttctattataaataggaccggaggtagtatt 42507487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 46208085 - 46208029
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  46208085 aatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 17653767 - 17653712
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  17653767 aatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 37508976 - 37508921
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  37508976 aatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 48340452 - 48340397
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  48340452 aatacattcacttttgttgacctaaatttctcttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 51406728 - 51406673
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||| ||||||||||||||    
T  51406728 aatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 2131748 - 2131802
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||||||||||||  ||||| |||| |||||||||||| ||||    
T  2131748 atacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagta 2131802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 9213570 - 9213513
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    ||||||||||||||||||||  |||  ||| ||||||||||||||||||| |||||||    
T  9213570 atacatcaacttttgttgactaaaatgtcttttataaataggaccggagggagtattt 9213513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 34988140 - 34988205
Alignment:
Q  32 tttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||| ||||||||||| |||||||| ||||  | ||||||||||||||||||||| ||||    
T  34988140 tttttaactagatacatcaactattgttgactcaaatatttcttataaataggaccggagggagta 34988205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 40691071 - 40691128
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||| ||| ||| ||||||||||||||||||||||| |||||||    
T  40691071 aatacattcacttttgttaacctaaatttctcttataaataggaccggagttagtatt 40691128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 36095755 - 36095811
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| || ||||||||||||||||||||| |||||    
T  36095755 aatacattcacttttgttgacctaaatttatcttataaataggaccggagggagtat 36095811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 5323282 - 5323337
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||||||||||||| ||  ||||||||||| | |||||| ||||    
T  5323282 aatacatcaacttttgttgacccaaattttacttataaatagtatcggagggagta 5323337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 9213591 - 9213646
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||| ||||||||||| ||| |||||| ||||||||||| ||||| ||||    
T  9213591 aatacatcaatttttgttgacctaaatttctctaataaataggacgggagggagta 9213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 34988125 - 34988074
Alignment:
Q  46 atcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||||||||  ||||| ||||||||||||| ||| |||||    
T  34988125 atcaacttttgttgacccaaatgtctctaataaataggaccgaagggagtat 34988074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 35513528 - 35513473
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||| ||| ||||    
T  35513528 aatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 43323115 - 43323072
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaatagga 84  Q
    |||||||||||||||||||||||||  || ||||||||||||||    
T  43323115 aatacatcaacttttgttgacccaattttttcttataaatagga 43323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 33128261 - 33128212
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggag 90  Q
    ||||||| |||||||||||||| ||| ||||||||||| |||||| ||||    
T  33128261 aatacattaacttttgttgacctaaatttctcttataattaggactggag 33128212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 45652123 - 45652067
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    ||||||| | |||||||||| ||||  ||||||||||||||||| ||||| ||||||    
T  45652123 atacatccatttttgttgactcaaatgtctcttataaataggactggagggagtatt 45652067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 4e-38; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 23359977 - 23360072
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23359977 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 41989502 - 41989404
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41989502 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 41989404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 9395385 - 9395482
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9395385 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 9395482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 36563633 - 36563537
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36563633 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 36563537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 13103059 - 13103156
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13103059 gtcaacaaaagtgaat-gtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 13103156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 11795203 - 11795299
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  11795203 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggactggagggagtat 11795299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 37149050 - 37148955
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  37149050 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 13033086 - 13033183
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  13033086 gtcaacaaaagtgaat-gtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagtatt 13033183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 21575981 - 21576077
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  21575981 gtcaacaaaagtgaat-gtatttggactgaatttttaattagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagtat 21576077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 6126860 - 6126954
Alignment:
Q  2 tcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    ||||||||| ||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6126860 tcaacaaaaatgaat-gtatttggactaaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 17025663 - 17025755
Alignment:
Q  5 acaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||| ||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17025663 acaaaagtgaat-gtatttaaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 17025755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 37641995 - 37642085
Alignment:
Q  7 aaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||| |||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  37641995 aaaagtgaat-gtatgtggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtat 37642085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 26350445 - 26350348
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||  ||||||||| ||||||||||||||||||| ||||||    
T  26350445 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttattgattcaaaattcttttataaataggaccggagggagtatt 26350348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 20848109 - 20848203
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    ||||| |||||||||| |||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||    
T  20848109 gtcaataaaagtgaat-gtatttggactgaatttttaactagatacatcaatttttgttg-cccaaaattctcttataaataggaccggagggagta 20848203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 4443995 - 4444085
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggagg 91  Q
    |||||||||||||||| |||||| |||||||||||||| || ||||||||||||||||||| | |||||||||||||||||| |||||||||    
T  4443995 gtcaacaaaagtgaat-gtatttagactgaatttttaaatagatacatcaacttttgttgatctaaaattctcttataaataagaccggagg 4444085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 583024 - 583099
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttat 76  Q
    ||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  583024 gtcaacataagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattcttttat 583099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 37149030 - 37149087
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  37149030 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37149087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 9395405 - 9395350
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  9395405 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 2366418 - 2366352
Alignment:
Q  17 tgtatttggactgaatttttaactaa-tacatcaacttttgttgacccaaaattctcttataaatag 82  Q
    ||||||||||||||| ||||||| || ||||| |||| ||||||||||||| |||||||||||||||    
T  2366418 tgtatttggactgaaattttaaccaaatacatgaactcttgttgacccaaatttctcttataaatag 2366352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 17025679 - 17025621
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||  |||||||| |||| ||| ||||||||||||||||||||||||||||||||    
T  17025679 aatacattcacttttgtggacctaaatttctcttataaataggaccggaggtagtattt 17025621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 36563613 - 36563671
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  36563613 aatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtattt 36563671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 583044 - 582987
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  |||| |||||||| ||| |||||||||||||||||||||||||||||||    
T  583044 aatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagtatt 582987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 20848129 - 20848072
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  |||||| |||||| ||| |||||||||||||||||||||||||||||||    
T  20848129 aatacattcacttttattgacctaaatttctcttataaataggaccggaggtagtatt 20848072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 13033106 - 13033050
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  13033106 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagtat 13033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 13103079 - 13103023
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  13103079 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagtat 13103023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 23359997 - 23359941
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  23359997 aatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagtat 23359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 41989482 - 41989538
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| |||||||| |||||||||||||||||||||    
T  41989482 aatacattcacttttgttgacctaaatttctcttacaaataggaccggaggtagtat 41989538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 11795223 - 11795168
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||| |||||||||||    
T  11795223 aatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 4444015 - 4443957
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||| ||| |||||||    
T  4444015 aatacattcacttttgttgacctaaatttctcttataaataggaccgaaggaagtattt 4443957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 37641997 - 37641951
Alignment:
Q  52 ttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||| |||||| ||| |||||||||||||||||||||||||||||||    
T  37641997 ttttattgacctaaatttctcttataaataggaccggaggtagtatt 37641951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 966206 - 966273
Alignment:
Q  25 gactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggagg 91  Q
    ||||||||||||||| | ||||||  | ||||||||| ||||| |||||||||||||||||| |||||    
T  966206 gactgaatttttaaccagatacattcatttttgttgatccaaatttctcttataaataggactggagg 966273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 9006949 - 9006894
Alignment:
Q  30 aatttttaacta-atacatcaacttttgttgacccaaaattctcttataaatagga 84  Q
    |||||| ||||| ||||||||||||||||||||| |||| ||| ||||||||||||    
T  9006949 aattttgaactagatacatcaacttttgttgacctaaaagtctgttataaatagga 9006894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 26350425 - 26350480
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  26350425 aatacattcacttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 3549627 - 3549553
Alignment:
Q  17 tgtatttggactgaatttttaact-aatacatcaacttttgttgacccaaaattctcttataaataggaccggag 90  Q
    ||||| ||| || ||||||||||  |||||||||||||||||| |   ||| |||||||||||||||||||||||    
T  3549627 tgtatctggtctaaatttttaaccgaatacatcaacttttgttaatataaatttctcttataaataggaccggag 3549553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 13539949 - 13539986
Alignment:
Q  52 ttttgttgacccaaaattctcttataaataggaccgga 89  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  13539949 ttttgttgacctaaatttctcttataaataggaccgga 13539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 27081015 - 27081063
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccgga 89  Q
    |||||||||||||||||||||| |||  |||||| ||||||||| ||||    
T  27081015 aatacatcaacttttgttgacctaaatgtctcttgtaaataggatcgga 27081063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 35584450 - 35584506
Alignment:
Q  43 tacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    ||||||||||||||||||| |||  ||||||||||||||| |  ||||| |||||||    
T  35584450 tacatcaacttttgttgactcaattttctcttataaatagaattggaggaagtattt 35584506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 35904449 - 35904518
Alignment:
Q  17 tgtatttggactgaatttttaact-aatacatcaacttttgttgacccaaaattctcttataaataggaccg 87  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||  ||  |||||| ||||||| |||||    
T  35904449 tgtatttggactgaatttttaactaaatacat--acttttgttgactaaattttctctaataaataagaccg 35904518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 36595846 - 36595782
Alignment:
Q  25 gactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccgg 88  Q
    ||||||||||||||  | ||||||||| ||||||||||| ||  |||||||||||||| ||||||    
T  36595846 gactgaatttttaatcagatacatcaatttttgttgacctaactttctcttataaataagaccgg 36595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 4e-38; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3055593 - 3055692
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3055593 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 3055691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 37990108 - 37990010
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37990108 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 37990010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 41478734 - 41478637
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41478734 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 41478637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 44398721 - 44398817
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44398721 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 44398817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 13197805 - 13197710
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13197805 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 15896877 - 15896972
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15896877 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 9047850 - 9047753
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9047850 gtcaaaaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 9047753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 16243878 - 16243781
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  16243878 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggatggagtatt 16243781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 38917617 - 38917521
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38917617 gtcaataaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 38917521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 44397582 - 44397678
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  44397582 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggggggagtat 44397678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 12338032 - 12337937
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12338032 gtcaacaaaaatgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 15372261 - 15372356
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15372261 gtcaacaaaagtgaat-gtatttggactgaatttttaacgagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 6648599 - 6648517
Alignment:
Q  17 tgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6648599 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 6648517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 37666705 - 37666608
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| ||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  37666705 gtcaacaaaagtgaat-gtatttgaactgaatttttaactagatacatcaactttagttgacccaaaattctcttataaataggaccggagggagtatt 37666608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 41492991 - 41492894
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  41492991 gtcaacaaaagtgaat-gtatttggacagaatttttaactagatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagtatt 41492894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 13344519 - 13344615
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  13344519 gtcaacaaaaatgaat-gtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagtat 13344615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 16044412 - 16044317
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| ||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  16044412 gtcaacaaaagtgaat-gtatttgaactgaatttttaactagatacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 30099277 - 30099181
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||| ||||| ||||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  30099277 gtcaacaaaaatgaat-gtatttggattgaatttttaattagatacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtat 30099181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 44804658 - 44804583
Alignment:
Q  17 tgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggagg 91  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||||||||||||||    
T  44804658 tgtatttggactgaatttttaactagatacatcaacttttgttaacttaaaattctcttataaataggaccggagg 44804583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 12170479 - 12170397
Alignment:
Q  17 tgtatttggactgaatttttaactaa-tacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||| || |||| | ||||||    
T  12170479 tgtatttggactgaatttttaactaaatacatcaacttttgttgacccaagtttctcttataaataagatcggatgaagtatt 12170397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 4684027 - 4683951
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttata 77  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||  ||| ||||||||||||||    
T  4684027 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgtaaaccgaaaattctcttata 4683951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 41478714 - 41478772
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  41478714 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 41478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 37990088 - 37990145
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  37990088 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 3055613 - 3055557
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  3055613 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 3055557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 4684007 - 4684063
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  4684007 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 4684063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 15896897 - 15896841
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  15896897 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 15896841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 44397602 - 44397546
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  44397602 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 44397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 44398741 - 44398685
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  44398741 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 44398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 13197785 - 13197840
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  13197785 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 16044392 - 16044447
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  16044392 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 16734833 - 16734908
Alignment:
Q  17 tgtatttggactgaatttttaactaa-tacatcaacttttgttgacccaaaattctcttataaataggaccggagg 91  Q
    ||||| ||||||||||||||||| || |||||||||||||||| || |||  |||||||||||||||||| |||||    
T  16734833 tgtatctggactgaatttttaaccaaatacatcaacttttgtttactcaactttctcttataaataggactggagg 16734908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 37666685 - 37666740
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  37666685 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 13344528 - 13344481
Alignment:
Q  52 ttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||||||||    
T  13344528 ttttgttgacctaaatttctcttataaatagaaccggaggtagtattt 13344481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 6648608 - 6648649
Alignment:
Q  55 tgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||| ||| |||||||||||||||||||||||||||||    
T  6648608 tgttgacctaaatttctcttataaataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 15372281 - 15372224
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||| ||||| ||||||    
T  15372281 aatacattcacttttgttgacctaaatttctcttataaataggactggagggagtatt 15372224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 23227347 - 23227404
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||||||||| |||  ||||||||||||||||| | ||| ||||||    
T  23227347 aatacatcaacttttgttgaccaaaatgtctcttataaataggactgaaggaagtatt 23227404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 16243858 - 16243914
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| || |||||||||||||||||||| ||||||    
T  16243858 aatacattcacttttgttgacctaaatttttcttataaataggaccggagatagtat 16243914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 38917597 - 38917653
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  |||||| |||||| ||| || |||||||||||||||||||||||||||    
T  38917597 aatacattcacttttattgacctaaatttatcttataaataggaccggaggtagtat 38917653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 13724157 - 13724102
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||||||||| | |  |||||| |||||||||||||||| ||||    
T  13724157 aatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 30099268 - 30099310
Alignment:
Q  52 ttttgttgacccaaaattctcttataaataggaccggaggtag 94  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||    
T  30099268 ttttgttgacctaaatttctcttataaataggatcggaggtag 30099310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 40714017 - 40714075
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||||||||||||||||| | || ||||||||||  |||||| |||| |||||||    
T  40714017 aatacatcaacttttgttgacctacaagtctcttataagaaggaccagaggcagtattt 40714075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 31150708 - 31150659
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggag 90  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||| |||||    
T  31150708 aatacataaacttttgttgacgcaactttctcttataaataggatcggag 31150659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 9047830 - 9047886
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  |||||| |||||| ||| |||||||||||||| |||||||| ||||||    
T  9047830 aatacattcactttttttgacctaaatttctcttataaatatgaccggagatagtat 9047886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 12338023 - 12338067
Alignment:
Q  52 ttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    ||||||||||| ||| || |||||||||||| |||||||||||||    
T  12338023 ttttgttgacctaaatttttcttataaatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 20900718 - 20900678
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaatag 82  Q
    ||||||||||||||| |||||||||  ||||||||||||||    
T  20900718 atacatcaacttttgctgacccaaatgtctcttataaatag 20900678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 36688936 - 36688892
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggacc 86  Q
    |||||||||| |||||||||| ||  |||||||||||||||||||    
T  36688936 atacatcaacgtttgttgaccaaactttctcttataaataggacc 36688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 41453109 - 41453149
Alignment:
Q  17 tgtatttggactgaatttttaac-taatacatcaacttttg 56  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  41453109 tgtatttggactgaatttttaacaaaatacatcaacttttg 41453149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 39571297 - 39571199
Alignment:
Q  2 tcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatttg 100  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39571297 tcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatttg 39571199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 7785873 - 7785776
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7785873 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 7785776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 54707 - 54611
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  54707 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 54611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 2890257 - 2890161
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2890257 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 2890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6552690 - 6552785
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6552690 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12763749 - 12763651
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  12763749 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagtattt 12763651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 7805794 - 7805697
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  7805794 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagtatt 7805697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 44498282 - 44498185
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  44498282 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtatt 44498185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 25601095 - 25600999
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25601095 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacattaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 43199449 - 43199353
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  43199449 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 3304373 - 3304278
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  3304373 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31654648 - 31654743
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  31654648 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattcttttataaataggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 33289355 - 33289256
Alignment:
Q  2 tcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatttg 100  Q
    |||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  33289355 tcaacataagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtacttg 33289257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 7012207 - 7012309
Alignment:
Q  2 tcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatttg 100  Q
    |||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||     
T  7012207 tcaacaaaagtgaata-tatttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggaccggaggaagtatttt 7012305  T
Q  101 gttt 104  Q
    ||||    
T  7012306 gttt 7012309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 32114570 - 32114472
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||    
T  32114570 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattttcttataaataggaccggagggagtattt 32114472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 32211458 - 32211360
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  32211458 gtcaacaaaaatgaat-gtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtattt 32211360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 12343235 - 12343146
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggag 90  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12343235 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 15888447 - 15888349
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||    
T  15888447 gtcaacaaaagtgaat-gtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaactggagggagtattt 15888349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13578892 - 13578972
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaata 81  Q
    ||||| |||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13578892 gtcaataaaagtgaat-gtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaata 13578972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 27422240 - 27422322
Alignment:
Q  17 tgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    ||||||||||||||||||||||| | ||||||  | ||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  27422240 tgtatttggactgaatttttaaccagatacattcatttttgttgacccaaatttctcttataaataggaccgaagggagtatt 27422322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 28463666 - 28463614
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggta 93  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  28463666 aatacatcaacttttgttgacccaactttctcttataaataggaccggaggta 28463614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 4245656 - 4245714
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  4245656 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 4245714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 54687 - 54744
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  54687 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 54744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 2890237 - 2890294
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  2890237 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 2890294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 7785853 - 7785910
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  7785853 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 7805774 - 7805831
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  7805774 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 8587220 - 8587301
Alignment:
Q  17 tgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    ||||||| |||| |||||||||||| |||||||||||||| ||||| |||  |||||||||||||| ||||||||| |||||    
T  8587220 tgtattttgactaaatttttaactagatacatcaacttttattgactcaagtttctcttataaataagaccggaggaagtat 8587301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 43199429 - 43199485
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  43199429 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 43199485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 3304353 - 3304408
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  3304353 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 6552710 - 6552655
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  6552710 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 8587225 - 8587170
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||||||| ||||    
T  8587225 aatacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 12343215 - 12343270
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  12343215 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 15888427 - 15888482
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  15888427 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 32114550 - 32114605
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  32114550 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 44498262 - 44498317
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  44498262 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 32211449 - 32211494
Alignment:
Q  52 ttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  32211449 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 12763729 - 12763785
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  12763729 aatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 25601075 - 25601131
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  25601075 aatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtat 25601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 31654668 - 31654613
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  31654668 aatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 39571278 - 39571333
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||| | ||| |||||||||||||||||||||||||||||    
T  39571278 aatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 7012217 - 7012171
Alignment:
Q  50 acttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    ||||||||||| | ||| |||||||||||||||||||||||||||||    
T  7012217 acttttgttgatctaaatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 15688084 - 15688038
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 88  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  15688084 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 15688038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 17006962 - 17006916
Alignment:
Q  45 catcaacttttgttgacccaaaattctcttataaataggaccggagg 91  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||    
T  17006962 catcaacttttgttgacccaactttctcttataaataggatcggagg 17006916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 17570285 - 17570331
Alignment:
Q  45 catcaacttttgttgacccaaaattctcttataaataggaccggagg 91  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||    
T  17570285 catcaacttttgttgacccaactttctcttataaataggatcggagg 17570331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 33289336 - 33289393
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  |||| |||||| | ||| |||||||||||||||||||||||||||||||    
T  33289336 aatacattcacttatgttgatctaaatttctcttataaataggaccggaggtagtatt 33289393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 24692058 - 24691986
Alignment:
Q  17 tgtatttggactgaatttttaactaatacatcaacttttgttgacccaaaattctcttataaataggaccgga 89  Q
    ||||| || |||||||||| | |  ||| ||||||||||||||||||||| |||| ||| |||||||||||||    
T  24692058 tgtatctgaactgaattttaaccagatatatcaacttttgttgacccaaatttcttttaaaaataggaccgga 24691986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 30171535 - 30171487
Alignment:
Q  43 tacatcaacttttgttgacccaaaattctcttataaataggaccggagg 91  Q
    ||||| ||||||||||||| |||||||||||| ||||||||| ||||||    
T  30171535 tacattaacttttgttgactcaaaattctcttgtaaataggatcggagg 30171487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 24692054 - 24692112
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatttg 100  Q
    ||||||||||||||||||||| ||  || |||||||||||||| || ||| ||||||||    
T  24692054 atacatcaacttttgttgacctaactttttcttataaataggatcgaagggagtatttg 24692112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 13246874 - 13246801
Alignment:
Q  17 tgtatttggactgaatttttaa-ctaatacatcaacttttgttgacccaaaattctcttataaataggaccgga 89  Q
    ||||| |||||||||||||||  | |||||||  | ||||||||| ||||| ||||||||||||||||| ||||    
T  13246874 tgtatctggactgaatttttagtcaaatacattcatttttgttgatccaaatttctcttataaataggatcgga 13246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 28463661 - 28463742
Alignment:
Q  17 tgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    ||||||||||||||||||| ||| | ||| ||||||||| | |||||||| |||||   |||||||||| |||||| |||||    
T  28463661 tgtatttggactgaattttgaaccagatatatcaactttcggtgacccaatattctgcaataaataggatcggagggagtat 28463742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 13578912 - 13578856
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  |||||| |||||| ||| ||||||||||||||| || |||||||||||    
T  13578912 aatacattcacttttattgacctaaatttctcttataaatagaactggaggtagtat 13578856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 33057648 - 33057592
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    ||||| ||| ||||||||| ||||  || ||||||||||||||||||||| ||||||    
T  33057648 atacaacaatttttgttgatccaactttgtcttataaataggaccggagggagtatt 33057592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 6e-37; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 1738542 - 1738445
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1738542 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 1738445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 7240784 - 7240881
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7240784 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 7240881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 9268791 - 9268887
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9268791 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 9268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 46840895 - 46840990
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46840895 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 7482260 - 7482357
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7482260 gtcaacaaaagtgaat-gtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 7482357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 38064008 - 38063911
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  38064008 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccagagggagtatt 38063911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 22285734 - 22285829
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22285734 gtcaacaaaagtgaat-gtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 23314234 - 23314139
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23314234 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 31319494 - 31319399
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  31319494 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 38441495 - 38441590
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38441495 gtcaacaaaagtgaat-gtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 33418411 - 33418500
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggag 90  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33418411 gtcaacaaaagtgaat-gtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 36583430 - 36583527
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  36583430 gtcaacaaaagtgaat-gtatttggacttaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagtatt 36583527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 1565824 - 1565728
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||    
T  1565824 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaaccgaagggagtat 1565728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 94413 - 94318
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  94413 gtcaacaaaagtgaat-gtatttggacagaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 36016291 - 36016206
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggacc 86  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  36016291 gtcaacaaaagtgaat-gtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaataggacc 36016206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 4790283 - 4790379
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||| ||||| ||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  4790283 gtcaacaaaaatgaat-gtatttggactaaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggaggaagtat 4790379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 28536846 - 28536750
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||| |||||    
T  28536846 gtcaacaaaagtgaat-gtatttggaatgaatttttaactagatacatcaacttttattgatccaaaattctcttataaataggaccggagggagtat 28536750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 40840199 - 40840126
Alignment:
Q  17 tgtatttggactgaatttttaactaa-tacatcaacttttgttgacccaaaattctcttataaataggaccgga 89  Q
    |||||||||||||||||||||||||| |||||||||||||||||||  ||| ||||||||||||||||||||||    
T  40840199 tgtatttggactgaatttttaactaagtacatcaacttttgttgacaaaaatttctcttataaataggaccgga 40840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9575444 - 9575539
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||| ||  |||||| ||||||||||||||||| ||||||||| ||||||||||| ||  |||||||||||||||||||| ||| ||||    
T  9575444 gtcaacaaaagttaac-gtatttagactgaatttttaactagatacatcaagttttgttgaccaaactttctcttataaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 46840915 - 46840856
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatttg 100  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  46840915 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttg 46840856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 1565804 - 1565862
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  1565804 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 1565862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 1738522 - 1738579
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  1738522 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 1738579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 7240804 - 7240747
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  7240804 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7240747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 7482280 - 7482224
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  7482280 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 7482224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 28536826 - 28536882
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  28536826 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 38063988 - 38064044
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  38063988 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 38064044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 23314214 - 23314269
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  23314214 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 31319474 - 31319529
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  31319474 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 36583450 - 36583395
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  36583450 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 9268811 - 9268754
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||| |||||||||||    
T  9268811 aatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagtatt 9268754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 22285754 - 22285697
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  22285754 aatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtatt 22285697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 7269476 - 7269412
Alignment:
Q  26 actgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccgga 89  Q
    |||||||||||||| | || |||||||||||||| ||||||  ||||||||||||||||||||||    
T  7269476 actgaatttttaaccagatgcatcaacttttgttaacccaactttctcttataaataggaccgga 7269412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 94393 - 94448
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||| |||||    
T  94393 aatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 7661152 - 7661207
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||||||||||||  |||| ||||||||||||| |||| |||||    
T  7661152 atacatcaacttttgttgacccaaatgtctcatataaataggaccagagggagtat 7661207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 36016271 - 36016326
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  36016271 aatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 38441515 - 38441460
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||  ||| |||||||||||||||||||||||||||||    
T  38441515 aatacattcacttttgttgacataaatttctcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 4790292 - 4790247
Alignment:
Q  52 ttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    ||||||||||| ||| || |||||||||||||||||||||||||||    
T  4790292 ttttgttgacctaaatttttcttataaataggaccggaggtagtat 4790247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 29993291 - 29993251
Alignment:
Q  49 aacttttgttgacccaaaattctcttataaataggaccgga 89  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  29993291 aacttttgttgacccaacattctcttacaaataggaccgga 29993251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 46877666 - 46877713
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggaccgga 89  Q
    |||||| |||||||||||||||||  |||||||||| |||||||||||    
T  46877666 atacattaacttttgttgacccaactttctcttatatataggaccgga 46877713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 7269481 - 7269535
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    ||||||||| ||||||||||||||  || ||||||||||| ||||||||| ||||    
T  7269481 atacatcaatttttgttgacccaactttttcttataaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 9575456 - 9575406
Alignment:
Q  49 aacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||||||||||||  |||||||| |||||||||| |||| |||||||    
T  9575456 aacttttgttgacccaactttctcttacaaataggaccagagggagtattt 9575406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 24710744 - 24710801
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    ||||||||||||||||||||||||    ||| ||||||| ||||||||||| ||||||    
T  24710744 aatacatcaacttttgttgacccagttgtcttttataaaaaggaccggagggagtatt 24710801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 7107751 - 7107783
Alignment:
Q  68 ttctcttataaataggaccggaggtagtatttg 100  Q
    ||||||| |||||||||||||||||||||||||    
T  7107751 ttctcttgtaaataggaccggaggtagtatttg 7107783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 6e-37; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 26602358 - 26602455
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26602358 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 26602455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 6330150 - 6330246
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6330150 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 6330246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 11572240 - 11572144
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11572240 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 11572144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 13853688 - 13853592
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13853688 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 13853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 2830370 - 2830465
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2830370 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 8383064 - 8382969
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8383064 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8099565 - 8099663
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8099565 gtcaacaaaagtgaat-gtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 8099663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 35031096 - 35031000
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  35031096 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggaggaagtat 35031000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 33052889 - 33052790
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||    
T  33052889 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggatggagtattt 33052791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 9644746 - 9644829
Alignment:
Q  17 tgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9644746 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 9644829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 9650763 - 9650846
Alignment:
Q  17 tgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9650763 tgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattt 9650846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 8417888 - 8417793
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  8417888 gtcaacaaaagtgaat-gtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 6068601 - 6068697
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    ||||| |||||||||| ||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  6068601 gtcaataaaagtgaat-gtatttggattgaatttttaactagatacatcaacttttgttgactcaaaattctcttataaataggaccggagggagtat 6068697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 28747228 - 28747145
Alignment:
Q  2 tcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggac 85  Q
    ||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  28747228 tcaacaaaagtgaat-gtatttggactgaatttttaattagatacatcaacttttgttgacccaaaattctcttataaataggac 28747145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6143589 - 6143677
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccgga 89  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||    
T  6143589 gtcaacaaaagtgaat-gtatttggattgaatttttaactagatacatcaacttttgttgtcccaaaattctcttataaatagaaccgga 6143677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17992023 - 17992118
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    ||||| |||||||||| ||||||||| |||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||| ||||    
T  17992023 gtcaataaaagtgaat-gtatttggattgaatttttaactagatacatcgatttttgttgacccaaaattctcttataaataggaccgaagggagta 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 22896513 - 22896593
Alignment:
Q  18 gtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||| || |||||    
T  22896513 gtatttggactgaatttttaactagatacatcaacttttgttgacaaaaaattctcttataaataggaccggcgggagtat 22896593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 3788093 - 3788168
Alignment:
Q  23 tggactgaatttttaactaa-tacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    ||||||||||| |||||||| |||||||||||||||||||| ||| || ||||||||||| ||||||||| |||||    
T  3788093 tggactgaattgttaactaaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagtat 3788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 8383044 - 8383101
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  8383044 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 8383101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 33052869 - 33052926
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  33052869 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 2830390 - 2830334
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  2830390 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 2830334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 8099585 - 8099529
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  8099585 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 8099529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 11572220 - 11572276
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  11572220 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 11572276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 6330170 - 6330115
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  6330170 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 26602378 - 26602323
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  26602378 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 13853668 - 13853725
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  13853668 aatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtatt 13853725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 6143609 - 6143553
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  6143609 aatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 35031076 - 35031132
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| || |||||||||||||||||||||||||||    
T  35031076 aatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtat 35031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 7597048 - 7596989
Alignment:
Q  26 actgaatttttaactaa-tacatcaacttttgttgacccaaaattctcttataaatagga 84  Q
    ||||||||||||||||| ||||||||||||| ||||| |||| ||||| |||||||||||    
T  7597048 actgaatttttaactaaatacatcaacttttattgactcaaatttctcctataaatagga 7596989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 8186443 - 8186489
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 88  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||||||    
T  8186443 atacatcaacttttgttgatccaaatttcttttataaataggaccgg 8186489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 14936532 - 14936582
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggagg 91  Q
    |||||||||||| |||||||||||||  |||||||||||||||||| ||||    
T  14936532 aatacatcaactattgttgacccaaatatctcttataaataggaccagagg 14936582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 6068621 - 6068564
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  |||||| |||||| ||| || ||||||||||||||||||||||||||||    
T  6068621 aatacattcacttttattgacctaaatttttcttataaataggaccggaggtagtatt 6068564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 9644737 - 9644696
Alignment:
Q  55 tgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||| ||| |||||||||||||||||||||||||||||    
T  9644737 tgttgacctaaatttctcttataaataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 9650754 - 9650713
Alignment:
Q  55 tgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||| ||| |||||||||||||||||||||||||||||    
T  9650754 tgttgacctaaatttctcttataaataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 31849635 - 31849586
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggag 90  Q
    |||||||||||||||||||||||| |  ||||||||||||| ||||||||    
T  31849635 aatacatcaacttttgttgacccatatgtctcttataaatatgaccggag 31849586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 13043802 - 13043758
Alignment:
Q  52 ttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    ||||||||||| ||| ||||||||||||||| |||||||||||||    
T  13043802 ttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 8186424 - 8186365
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatttg 100  Q
    ||||||||||||||| ||||||||||  |||||| || |||||| |||||| ||||||||    
T  8186424 aatacatcaacttttattgacccaaatgtctcttgtatataggagcggaggaagtatttg 8186365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13043793 - 13043850
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgtt 58  Q
    |||||||||| ||||| ||||||| | |||||||||||||| |||||||||||||||||    
T  13043793 gtcaacaaaaatgaat-gtatttgaattgaatttttaactagatacatcaacttttgtt 13043850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 8417868 - 8417925
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||| |||| |||| ||||||    
T  8417868 aatacattcacttttgttgacctaaatttctcttataaataagaccagagggagtatt 8417925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 22896512 - 22896471
Alignment:
Q  55 tgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||| ||| |||||||||||||||||||||||| ||||    
T  22896512 tgttgacctaaacttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 22880944 - 22880912
Alignment:
Q  69 tctcttataaataggaccggaggtagtatttgg 101  Q
    |||||| ||||||||||||||||||||||||||    
T  22880944 tctcttgtaaataggaccggaggtagtatttgg 22880912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 22898879 - 22898847
Alignment:
Q  69 tctcttataaataggaccggaggtagtatttgg 101  Q
    |||||| ||||||||||||||||||||||||||    
T  22898879 tctcttgtaaataggaccggaggtagtatttgg 22898847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 6e-37; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 14984872 - 14984969
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14984872 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 14984969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 27159453 - 27159358
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27159453 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 31842890 - 31842795
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31842890 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 39402061 - 39401966
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39402061 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 44668188 - 44668093
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44668188 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 9981682 - 9981772
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggagg 91  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9981682 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagg 9981772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 47216794 - 47216698
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  47216794 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagtaccggagggagtat 47216698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 11795968 - 11796063
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11795968 gtcaacaaaagtgaat-gcatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26471160 - 26471065
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  26471160 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 47777576 - 47777481
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47777576 gtcaacaaaagtgaat-gtatttggactgaattttgaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1050923 - 1051021
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||||||||||| | |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  1050923 gtcaacaaaagtgaat-gcatttggactgaatttttaactagatacatcaactttagttgacccaaaattctcttataaataggaccggagggagtattt 1051021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 34042731 - 34042829
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  34042731 gtcaacaaaaatgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagtattt 34042829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 12483723 - 12483626
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaactaa-tacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12483723 gtcaacaaaagtgaat-gtatttagactgaattttgaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 12483626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 44955301 - 44955212
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggag 90  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44955301 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 17556787 - 17556884
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||| |||||    
T  17556787 gtcaacaaaagttaaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctcttataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 25694355 - 25694450
Alignment:
Q  2 tcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||| |||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25694355 tcaataaaagtgaat-gtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 47588432 - 47588335
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||  |||| ||| ||||||    
T  47588432 gtcaacaaaagtgaat-gtatttggactgaatttttaattagatacatcaacttttgttgacccaaaattctcttataaataaaaccgaagggagtatt 47588335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 47969730 - 47969827
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||| ||| |||||| ||||||||||||||||| ||||||||||||||||||| |||||||| | ||||||||||||||||||| ||||||    
T  47969730 gtcaacaaaagtaaat-gtatttagactgaatttttaactagatacatcaacttttgttgatccaaaattattttataaataggaccggagggagtatt 47969827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 23278096 - 23278021
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttat 76  Q
    |||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23278096 gtcaacaaaaatgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttat 23278021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 11897104 - 11897188
Alignment:
Q  17 tgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatttg 100  Q
    ||||| || ||||||||||||||   ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  11897104 tgtatctgaactgaatttttaaccggatacatcaacttttgttgacccaaatttctcttataaataggaccggagggagtatttg 11897188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 16448184 - 16448239
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||| |||||    
T  16448184 atacatcaacttttgttgacccaactttctcttataaataggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 11989833 - 11989911
Alignment:
Q  19 tatttggactgaatttttaactaa-tacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    ||||||||||||||||||||| || |||||||| |||| ||||| |||| |||| ||||||||||||||||||| ||||    
T  11989833 tatttggactgaatttttaaccaaatacatcaatttttattgactcaaatttcttttataaataggaccggagggagta 11989911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 11795979 - 11795930
Alignment:
Q  50 acttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  11795979 acttttgttgacctaaatttctcttataaataggaccggaggtagtattt 11795930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 12483703 - 12483760
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  12483703 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 12483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 26471140 - 26471197
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  26471140 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 26471197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 27159433 - 27159490
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  27159433 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 27159490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 37552191 - 37552272
Alignment:
Q  17 tgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    ||||| ||||||||||||||||| | ||||||  | ||||||||||||||| ||||||||||||||||||||| || |||||    
T  37552191 tgtatctggactgaatttttaaccagatacattcatttttgttgacccaaatttctcttataaataggaccggggggagtat 37552272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 44668168 - 44668225
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  44668168 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 44668225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 1598460 - 1598389
Alignment:
Q  17 tgtatttggactgaatttttaactaatacatcaacttttgttgacccaaaattctcttataaataggaccgga 89  Q
    |||||||||||||||||||||||  ||||||||| ||||||||| ||| | ||||||||||||||||| ||||    
T  1598460 tgtatttggactgaatttttaacatatacatcaatttttgttga-ccatatttctcttataaataggatcgga 1598389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 9981702 - 9981646
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  9981702 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 9981646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 11897108 - 11897053
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||||| |||||    
T  11897108 atacatcaacttttgttgacctaactttctcttataaataggaccggagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 14984892 - 14984833
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatttg 100  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||| |||||||||    
T  14984892 aatacattcacttttgttgacctaaatttctcttataaataggaccggagatagtatttg 14984833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 31842870 - 31842925
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  31842870 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 39402041 - 39402096
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  39402041 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 47216774 - 47216829
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  47216774 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 1050934 - 1050888
Alignment:
Q  50 acttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  1050934 acttttgttgacctaaatttctcttataaataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 34042740 - 34042695
Alignment:
Q  52 ttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  34042740 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 34042695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 23278087 - 23278131
Alignment:
Q  52 ttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||    
T  23278087 ttttgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 44955281 - 44955336
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| || ||||||||||||||||||||||||||    
T  44955281 aatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 47777556 - 47777611
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||| |||||||    
T  47777556 aatacattcacttttgttgacctaaatttctcttataaataggaccgggggtagta 47777611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 12213554 - 12213484
Alignment:
Q  17 tgtatttggactgaatttttaactaa-tacatcaacttttgttgacccaaaattctcttataaataggacc 86  Q
    ||||||| || ||||||||||||||| || ||||| ||||||||||||||  |||||| ||||||||||||    
T  12213554 tgtatttagattgaatttttaactaaataaatcaatttttgttgacccaagtttctctaataaataggacc 12213484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 16448188 - 16448114
Alignment:
Q  17 tgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggag 90  Q
    ||||| ||||||||||||| ||| | |||||| ||||||||||||||||| |||| | |||||||| ||||||||    
T  16448188 tgtatctggactgaattttgaaccagatacataaacttttgttgacccaatattcccctataaataagaccggag 16448114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 47588412 - 47588469
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||| |||| |||||||||||    
T  47588412 aatacattcacttttgttgacctaaatttctcttataaataagaccagaggtagtatt 47588469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 99
Target Start/End: Original strand, 9302041 - 9302071
Alignment:
Q  69 tctcttataaataggaccggaggtagtattt 99  Q
    |||||||||||||||||||||||||||||||    
T  9302041 tctcttataaataggaccggaggtagtattt 9302071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 12213549 - 12213605
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    ||||||| || ||||||||||| || ||||||||||||||| ||| ||||| |||||    
T  12213549 aatacattaatttttgttgacctaacattctcttataaataagactggagggagtat 12213605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 17556799 - 17556751
Alignment:
Q  49 aacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||| ||  ||||||||||||||||||| |||| |||||    
T  17556799 aacttttgttgacctaactttctcttataaataggaccagagggagtat 17556751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 21537945 - 21537993
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 90  Q
    |||||||||||||||||||| |||  |||||||||||||| || |||||    
T  21537945 atacatcaacttttgttgactcaattttctcttataaataagatcggag 21537993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 97
Target Start/End: Original strand, 39720788 - 39720816
Alignment:
Q  69 tctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||||||||||||||||    
T  39720788 tctcttataaataggaccggaggtagtat 39720816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 77; Significance: 9e-36; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 49540 - 49635
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaactaa-tacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  49540 gtcaacaaaagtgaat-gtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 49560 - 49502
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  49560 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattt 49502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 9e-36; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 47833646 - 47833741
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47833646 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 6121987 - 6121893
Alignment:
Q  2 tcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6121987 tcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 5986911 - 5987000
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaactaa-tacatcaacttttgttgacccaaaattctcttataaataggaccggag 90  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5986911 gtcaacaaaagtgaat-gtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 5987000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 33621831 - 33621928
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  33621831 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagtatt 33621928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 47838712 - 47838615
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  47838712 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtatt 47838615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 48336298 - 48336395
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  48336298 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtatt 48336395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 3904778 - 3904682
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaactaa-tacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  3904778 gtcaacaaaagtgaat-gtatttggactgaatttttaactaaatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 3904682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 3993011 - 3993107
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  3993011 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataagaccggagggagtat 3993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 53337405 - 53337501
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  53337405 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttattgacccaaaattctcttataaataggaccggagggagtat 53337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 3372156 - 3372251
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  3372156 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 20538781 - 20538686
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  20538781 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaaattttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 42797767 - 42797862
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  42797767 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 46797760 - 46797855
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46797760 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatatatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 41469861 - 41469764
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  41469861 gtcaacaaaagtgaat-gtatttggactgaatttttaaatagatacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtatt 41469764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 24704405 - 24704501
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  24704405 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacattaacttttgttgacccaaaattctcttataaataggatcggagggagtat 24704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 43900584 - 43900679
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  43900584 gtcaacaaaagtaaat-gtatttggactgaatttttaactagatacatcaacttttgttaacccaaaattctcttataaataggaccggaggaagta 43900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 51894677 - 51894582
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||| || ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  51894677 gtcaacaaaagtgaat-gtttttggactgaatttttaaccagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 3422110 - 3422192
Alignment:
Q  17 tgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3422110 tgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 3422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 7579348 - 7579440
Alignment:
Q  4 aacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  7579348 aacaaaagtgaat-gtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 52756710 - 52756806
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    ||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||    
T  52756710 gtcaacataagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattcttttataaataggaccgaagggagtat 52756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 40913283 - 40913194
Alignment:
Q  2 tcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggagg 91  Q
    ||||||||||||||| |||||||||||||||||||||||  ||| ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  40913283 tcaacaaaagtgaat-gtatttggactgaatttttaactggatatatcaacttttgttgatccaaatttctcttataaataggaccggagg 40913194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 41615771 - 41615683
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaactaa-tacatcaacttttgttgacccaaaattctcttataaataggaccgga 89  Q
    |||||||||||| ||| ||||||||||| ||||||||||||| |||||||||||||||||| ||||  ||||||||||||||||||||||    
T  41615771 gtcaacaaaagttaat-gtatttggacttaatttttaactaaatacatcaacttttgttgatccaattttctcttataaataggaccgga 41615683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33551236 - 33551312
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttata 77  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  33551236 gtcaacaaaagtgaat-gtattttgactgaatttttaactagatacatcaacttttgtaaacccaaaattctcttata 33551312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 3372176 - 3372119
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  3372176 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 3372119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 3993031 - 3992974
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  3993031 aatacattcacttttgttgaccgaaatttctcttataaataggaccggaggtagtatt 3992974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 17236863 - 17236912
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggag 90  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||    
T  17236863 aatacatcaacttttgttgacccaaatttttcttataaataggaccggag 17236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26231612 - 26231688
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttata 77  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||| ||||||||||||  ||| ||||||||||||||    
T  26231612 gtcaacaaaagcgaat-gtatttggactgaatttttaactagatatatcaacttttgtaaaccgaaaattctcttata 26231688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 47833666 - 47833609
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  47833666 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 47833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 48336318 - 48336261
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  48336318 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 48336261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 33551256 - 33551200
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  33551256 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 33551200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 20538761 - 20538816
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  20538761 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 24704425 - 24704370
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  24704425 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 53337425 - 53337370
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  53337425 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 4780371 - 4780425
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 26231622 - 26231576
Alignment:
Q  51 cttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||    
T  26231622 cttttgttgacctaaatttctcttataaataggaccggaggtagtat 26231576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 43900604 - 43900546
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  43900604 aatacatttacttttgttgacctaaatttctcttataaataggaccggagggagtattt 43900546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 42797787 - 42797730
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  42797787 aatacattcacttttgttgacctaaatttctcttatatataggaccggaggtagtatt 42797730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 3904758 - 3904814
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| |||| |||||||||||||||||||||||||    
T  3904758 aatacattcacttttgttgacctaaatttcttttataaataggaccggaggtagtat 3904814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 7579365 - 7579309
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||| ||| ||| ||||||||||||||||||||||||||||||    
T  7579365 aatacattcacttttgttaacctaaatttctcttataaataggaccggaggtagtat 7579309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 47838692 - 47838748
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  47838692 aatacattcacttttgttgaccgaaatttctcttataaataggatcggaggtagtat 47838748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 51894666 - 51894714
Alignment:
Q  50 acttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  51894666 acttttgttgacctaaatttttcttataaataggaccggaggtagtatt 51894714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 6121968 - 6122023
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||| | ||| |||||||||||||||||||||||||||||    
T  6121968 aatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 17344263 - 17344346
Alignment:
Q  17 tgtatttggactgaatttttaa-ctaatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    ||||| || ||||||||||||| |  ||||||||||||||||||| ||||| |||||||||||||| ||  ||||| |||||||    
T  17344263 tgtatctgaactgaatttttaatcggatacatcaacttttgttgatccaaatttctcttataaataagattggagggagtattt 17344346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 29845697 - 29845769
Alignment:
Q  19 tatttggactgaatttttaactaatacatc-aacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||| ||||||||||||||||||||||| |||||||||||| ||      |||||||||||||||||||||| ||||    
T  29845697 tatttgaactgaatttttaactaatacatcaaacttttgttgatcc------ctcttataaataggaccggagggagta 29845769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 46797780 - 46797725
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  ||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  46797780 aatacattcacttttgttgacctaaatttctcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 50430498 - 50430431
Alignment:
Q  17 tgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaatagg 83  Q
    |||||||||| |||||||||||| | ||||||||| |||||||||||||||  | |||||||||||||    
T  50430498 tgtatttggattgaatttttaaccagatacatcaatttttgttgacccaaatatatcttataaatagg 50430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 45478151 - 45478217
Alignment:
Q  26 actgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggagg 91  Q
    ||||||||||||||   |||||||||||||| |||||||| | ||||||||||||||||| ||||||    
T  45478151 actgaatttttaaccggatacatcaacttttattgacccacatttctcttataaataggatcggagg 45478217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25855118 - 25855182
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaa-ctaatacatcaacttttgttgacccaa 65  Q
    |||||||||||| ||| ||||||||||||||||||||| | |||||||| |||||||| |||||||    
T  25855118 gtcaacaaaagttaat-gtatttggactgaatttttaaccaaatacatcgacttttgtagacccaa 25855182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 40913264 - 40913320
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  40913264 aatacattcacttttgttgatctaaatttctcttataaataggaccggagggagtat 40913320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 52756730 - 52756675
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||  |||| |||||||| ||| ||||||||||||||||||||||| |||||    
T  52756730 aatacattcacttatgttgacctaaatttctcttataaataggaccggagatagta 52756675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 1716355 - 1716301
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    ||||||||||||||||||||| ||   ||||||||||||| ||||||||| ||||    
T  1716355 atacatcaacttttgttgaccaaattatctcttataaataagaccggagggagta 1716301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 41469841 - 41469899
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtattt 99  Q
    |||||||  ||||||||||||| ||| |||| ||||||||||||||| ||| |||||||    
T  41469841 aatacattcacttttgttgacctaaatttcttttataaataggaccgaaggaagtattt 41469899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 44900130 - 44900080
Alignment:
Q  46 atcaacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||||||||||||||  ||  ||||||||||||||||||||||| ||||    
T  44900130 atcaacttttgttgaccagaatatctcttataaataggaccggagggagta 44900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 25855138 - 25855082
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    ||||||| ||||||||||||| |||  |||||| |||||||||||| |||| |||||    
T  25855138 aatacattaacttttgttgactcaactttctctcataaataggacctgagggagtat 25855082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 33621851 - 33621795
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| ||||||||||||||| |||| | |||||||    
T  33621851 aatacattcacttttgttgacctaaatttctcttataaatagaaccgaaagtagtat 33621795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 41594708 - 41594660
Alignment:
Q  42 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 90  Q
    ||||||||||||||||||||||||  ||||||||||  | |||||||||    
T  41594708 atacatcaacttttgttgacccaactttctcttatatgtgggaccggag 41594660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 99
Target Start/End: Complemental strand, 47866060 - 47866032
Alignment:
Q  71 tcttataaataggaccggaggtagtattt 99  Q
    |||||||||||||||||||||||||||||    
T  47866060 tcttataaataggaccggaggtagtattt 47866032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 50430493 - 50430533
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaata 81  Q
    |||||||||||||||||||||||||  | ||||||||||||    
T  50430493 aatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 12895 - 12992
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  12895 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattctcttataaataggaccggagggagtatt 12992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 12915 - 12858
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  12915 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 12858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 23820 - 23917
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  23820 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtatt 23917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 23840 - 23783
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  23840 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 23783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 6226 - 6129
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatt 98  Q
    |||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  6226 gtcaacaaaagtgaat-gtatgtggactgaatttttaactagatacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtatt 6129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 6215 - 6261
Alignment:
Q  50 acttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  6215 acttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1370 - 1453
Alignment:
Q  1 gtcaacaaaagtgaattgtatttggactgaatttttaacta-atacatcaacttttgttgacccaaaattctcttataaatagga 84  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1370 gtcaacaaaagtgaat-gtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattctcttataaatagga 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 1390 - 1334
Alignment:
Q  41 aatacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtat 97  Q
    |||||||  ||||||||||||| ||| |||||||||||||||||||||| |||||||    
T  1390 aatacattcacttttgttgacctaaatttctcttataaataggaccggatgtagtat 1334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 231383 - 231299
Alignment:
Q  17 tgtatttggactgaatttttaactaa-tacatcaacttttgttgacccaaaattctcttataaataggaccggaggtagtatttg 100  Q
    ||||| ||||||||||||| |||||  || ||||||||||||||||| || |||||| |||||||||||||||||| ||||||||    
T  231383 tgtatctggactgaattttgaactaggtatatcaacttttgttgacctaatattctcctataaataggaccggagggagtatttg 231299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 13804 - 13731
Alignment:
Q  19 tatttggactgaatttttaactaatacatc--aacttttgttgacccaaaattctcttataaataggaccggaggtagta 96  Q
    |||||| |||||||||||||||||||||||  |||||||||||| ||      |||||||||||||||||||||| ||||    
T  13804 tatttgaactgaatttttaactaatacatcaaaacttttgttgatcc------ctcttataaataggaccggagggagta 13731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 65 - 1
Alignment:
Q  17 tgtatttggactgaatttttaactaa-tacatcaacttttgttgacccaaaattctcttataaat 80  Q
    |||||||||||| |||||||||| || ||||||||||||||||||| | |  |||||||||||||    
T  65 tgtatttggactaaatttttaaccaaatacatcaacttttgttgactcgactttctcttataaat 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University