View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9388_high_12 (Length: 350)
Name: NF9388_high_12
Description: NF9388
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9388_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 18 - 339
Target Start/End: Complemental strand, 38928585 - 38928264
Alignment:
| Q |
18 |
gtatgcaagacaaggttttccttataagccatggcaggttaagactttggtgatgcaaggttttgtttctgaggttgctgctgcttctcaagccaaacat |
117 |
Q |
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| T |
38928585 |
gtatgcaagacaaggttttccttataagccatggcaggttaagactttggtgatgcaaggttttgtttctgaggttgctgctgcttctcaagccaaacat |
38928486 |
T |
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| Q |
118 |
ttctccttggctaatcatgcttgctcctaaatctgtattagtatttataatgtcatgtcttttttaatactattgtatagaatggaaatggaaatcactg |
217 |
Q |
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| T |
38928485 |
ttctccttggctaatcatgcttgctcctaaatctgtattagtatttataatgtcatgtcttttttaatactattgtatagaatggaaatggaaatcacta |
38928386 |
T |
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| Q |
218 |
ctgtgtgatgttaatttaatttggaaagatgatgatggtgtgaactatatgaagaatttgaaaagtattaataagtttttgtattacttgccccactttt |
317 |
Q |
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| T |
38928385 |
ctgtgtgatgttaatttaatttggaaagatgatgatggtgtgaactatatgaagaatttgaaaagtattaataagtttttgtattacttgccccactttt |
38928286 |
T |
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| Q |
318 |
cttttctactaatcgttgatgt |
339 |
Q |
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|||||||||||||||||||||| |
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| T |
38928285 |
cttttctactaatcgttgatgt |
38928264 |
T |
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