View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9388_low_94 (Length: 237)
Name: NF9388_low_94
Description: NF9388
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9388_low_94 |
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Alignment Details
Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 39977217 - 39977416
Alignment:
| Q |
20 |
tgtcacaaacaattgtttgtgacattctaccttgtaaatcacattttgttatactaggaaaagaacaaggttgatgaggtggtttagatgaaagataagc |
119 |
Q |
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| T |
39977217 |
tgtcacaaacaattgtttgtgacattctaccttgtaaatcacattttgttatactaggaaaagaacaaggttgatgaggtggtttagatgaaagataagc |
39977316 |
T |
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| Q |
120 |
taaattaaaaccataacttttcatttttcttgcagctctatagtatgaatttgcaagtagttggtacaaaaccaaatctacaagccttagaagaaccatt |
219 |
Q |
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| T |
39977317 |
taaattaaaaccataacttttcatttttcttgcagctctatagtatgaatttgcaagtagttggtacaaaaccaaatctacaagccttagaagaaccatt |
39977416 |
T |
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