View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9389_low_26 (Length: 287)

Name: NF9389_low_26
Description: NF9389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9389_low_26
NF9389_low_26
[»] chr6 (48 HSPs)
chr6 (185-287)||(23992078-23992180)
chr6 (185-287)||(34963021-34963123)
chr6 (187-287)||(27126606-27126706)
chr6 (188-271)||(17105242-17105325)
chr6 (232-287)||(22074567-22074622)
chr6 (187-287)||(7825392-7825489)
chr6 (234-287)||(2076944-2076997)
chr6 (222-287)||(22805442-22805507)
chr6 (234-287)||(23414377-23414430)
chr6 (224-287)||(17105344-17105407)
chr6 (187-271)||(17742764-17742845)
chr6 (234-287)||(1643982-1644035)
chr6 (234-287)||(16623826-16623879)
chr6 (222-287)||(19774060-19774125)
chr6 (234-287)||(31478565-31478618)
chr6 (234-286)||(8243305-8243357)
chr6 (234-286)||(11566334-11566386)
chr6 (234-286)||(12619424-12619476)
chr6 (234-286)||(22862418-22862470)
chr6 (234-286)||(23394540-23394592)
chr6 (234-286)||(23989392-23989444)
chr6 (187-271)||(19774109-19774190)
chr6 (187-271)||(22805377-22805458)
chr6 (234-287)||(14471685-14471738)
chr6 (222-287)||(15705936-15706001)
chr6 (234-286)||(19870062-19870114)
chr6 (232-283)||(17742872-17742923)
chr6 (232-287)||(23538247-23538302)
chr6 (187-271)||(15706018-15706099)
chr6 (187-271)||(20182325-20182407)
chr6 (187-271)||(22153584-22153666)
chr6 (237-286)||(27416508-27416557)
chr6 (235-287)||(19656621-19656673)
chr6 (202-271)||(19656695-19656761)
chr6 (211-271)||(19656762-19656819)
chr6 (242-287)||(22948563-22948608)
chr6 (242-287)||(22952519-22952564)
chr6 (242-287)||(23871007-23871052)
chr6 (242-287)||(23874963-23875008)
chr6 (187-235)||(19656821-19656869)
chr6 (216-271)||(15705985-15706040)
chr6 (234-276)||(16759742-16759784)
chr6 (187-235)||(2076875-2076923)
chr6 (248-287)||(18917990-18918029)
chr6 (234-271)||(16759709-16759746)
chr6 (222-271)||(17742829-17742878)
chr6 (234-271)||(23538216-23538253)
chr6 (258-287)||(27556159-27556188)
[»] chr3 (65 HSPs)
chr3 (185-283)||(13543630-13543728)
chr3 (185-287)||(46821872-46821974)
chr3 (185-287)||(12120173-12120275)
chr3 (185-287)||(38962291-38962393)
chr3 (187-278)||(19884816-19884907)
chr3 (187-287)||(35353317-35353414)
chr3 (187-271)||(18700918-18701002)
chr3 (232-287)||(14668279-14668334)
chr3 (232-287)||(15464572-15464627)
chr3 (187-287)||(10562435-10562532)
chr3 (187-287)||(42353679-42353776)
chr3 (222-287)||(10543014-10543079)
chr3 (222-287)||(14670533-14670598)
chr3 (234-287)||(15964419-15964472)
chr3 (234-287)||(15968343-15968396)
chr3 (234-287)||(15972267-15972320)
chr3 (222-287)||(18700869-18700934)
chr3 (232-284)||(12339173-12339225)
chr3 (232-287)||(5222795-5222850)
chr3 (232-287)||(14665123-14665178)
chr3 (222-284)||(2842664-2842726)
chr3 (234-287)||(16750922-16750975)
chr3 (234-287)||(19775042-19775095)
chr3 (234-287)||(37440218-37440271)
chr3 (234-286)||(7109171-7109223)
chr3 (234-286)||(7113106-7113158)
chr3 (235-287)||(8489768-8489820)
chr3 (234-286)||(11069543-11069595)
chr3 (234-286)||(14498800-14498852)
chr3 (234-286)||(15616849-15616901)
chr3 (234-286)||(22321139-22321191)
chr3 (234-286)||(22336194-22336246)
chr3 (234-286)||(27410226-27410278)
chr3 (234-286)||(28949197-28949249)
chr3 (234-286)||(55022340-55022392)
chr3 (232-287)||(14682065-14682120)
chr3 (187-271)||(2842710-2842791)
chr3 (233-287)||(12852891-12852945)
chr3 (234-287)||(4589494-4589547)
chr3 (234-282)||(4107985-4108033)
chr3 (234-282)||(4111837-4111885)
chr3 (234-286)||(11166111-11166163)
chr3 (236-287)||(16795985-16796036)
chr3 (237-287)||(17317709-17317759)
chr3 (234-287)||(5214723-5214776)
chr3 (222-271)||(13520978-13521027)
chr3 (222-287)||(43890179-43890244)
chr3 (189-271)||(15565259-15565338)
chr3 (187-256)||(14681990-14682056)
chr3 (211-271)||(14441047-14441104)
chr3 (222-287)||(14441088-14441153)
chr3 (242-287)||(44269408-44269453)
chr3 (187-235)||(14440997-14441045)
chr3 (187-256)||(5214657-5214723)
chr3 (187-234)||(10543097-10543144)
chr3 (244-287)||(30065432-30065475)
chr3 (187-271)||(14670468-14670549)
chr3 (187-271)||(43890261-43890342)
chr3 (222-271)||(43890228-43890277)
chr3 (234-271)||(12339142-12339179)
chr3 (222-271)||(15565322-15565371)
chr3 (187-235)||(8489839-8489887)
chr3 (187-235)||(12339107-12339154)
chr3 (187-235)||(14665056-14665104)
chr3 (187-235)||(37440292-37440340)
[»] chr8 (29 HSPs)
chr8 (185-271)||(32121394-32121480)
chr8 (232-287)||(21386803-21386858)
chr8 (232-287)||(23913741-23913796)
chr8 (234-287)||(18863251-18863304)
chr8 (234-287)||(21828620-21828673)
chr8 (234-287)||(30940683-30940736)
chr8 (232-287)||(14398429-14398484)
chr8 (232-287)||(32121474-32121529)
chr8 (234-287)||(21410397-21410450)
chr8 (234-287)||(21804889-21804942)
chr8 (185-271)||(16413809-16413884)
chr8 (234-286)||(21973163-21973215)
chr8 (234-286)||(21977254-21977306)
chr8 (234-286)||(22111403-22111455)
chr8 (234-286)||(43251283-43251335)
chr8 (232-287)||(16413760-16413815)
chr8 (187-271)||(37515157-37515238)
chr8 (187-271)||(42819156-42819237)
chr8 (233-287)||(44385227-44385281)
chr8 (222-287)||(42819107-42819172)
chr8 (189-271)||(18833039-18833118)
chr8 (222-281)||(18833102-18833161)
chr8 (211-271)||(5760180-5760237)
chr8 (187-228)||(5760131-5760172)
chr8 (196-287)||(19929978-19930066)
chr8 (196-267)||(6102856-6102924)
chr8 (234-271)||(23913710-23913747)
chr8 (187-235)||(18863325-18863373)
chr8 (187-235)||(21828694-21828742)
[»] chr7 (54 HSPs)
chr7 (185-271)||(24274740-24274826)
chr7 (185-287)||(15082324-15082425)
chr7 (185-271)||(14933118-14933201)
chr7 (185-271)||(15356553-15356636)
chr7 (185-271)||(15360667-15360750)
chr7 (187-287)||(14183819-14183916)
chr7 (187-287)||(32300761-32300858)
chr7 (232-287)||(20487266-20487321)
chr7 (222-287)||(16579267-16579332)
chr7 (222-287)||(16585166-16585231)
chr7 (222-287)||(16586330-16586395)
chr7 (234-287)||(45170612-45170665)
chr7 (234-286)||(1859406-1859458)
chr7 (234-286)||(13919077-13919129)
chr7 (232-287)||(2530735-2530790)
chr7 (232-287)||(24274820-24274875)
chr7 (236-287)||(25927822-25927873)
chr7 (187-271)||(14257837-14257918)
chr7 (233-287)||(18301772-18301826)
chr7 (234-287)||(12705240-12705293)
chr7 (234-287)||(15083643-15083696)
chr7 (222-287)||(20585214-20585279)
chr7 (234-287)||(26291844-26291897)
chr7 (234-286)||(32581-32633)
chr7 (234-286)||(71349-71401)
chr7 (234-286)||(75458-75510)
chr7 (234-286)||(12718140-12718192)
chr7 (234-286)||(12723051-12723103)
chr7 (234-286)||(16113713-16113765)
chr7 (234-286)||(16116866-16116918)
chr7 (234-286)||(16907793-16907845)
chr7 (234-286)||(18282838-18282890)
chr7 (232-287)||(2832778-2832833)
chr7 (187-271)||(16585101-16585182)
chr7 (187-271)||(20585149-20585230)
chr7 (234-287)||(18425132-18425185)
chr7 (234-287)||(39721713-39721766)
chr7 (234-286)||(18278875-18278927)
chr7 (232-283)||(14257945-14257996)
chr7 (232-287)||(15605873-15605928)
chr7 (233-287)||(16461500-16461554)
chr7 (222-287)||(12466473-12466538)
chr7 (190-271)||(12466522-12466600)
chr7 (187-271)||(16579202-16579283)
chr7 (187-235)||(20487199-20487247)
chr7 (187-235)||(25927898-25927946)
chr7 (232-271)||(14257912-14257951)
chr7 (203-271)||(16586379-16586444)
chr7 (234-271)||(20487235-20487272)
chr7 (187-235)||(7519695-7519743)
chr7 (187-235)||(12705314-12705362)
chr7 (187-235)||(13919150-13919198)
chr7 (187-235)||(15083574-15083622)
chr7 (187-235)||(39721644-39721692)
[»] scaffold0023 (2 HSPs)
scaffold0023 (185-271)||(18108-18194)
scaffold0023 (232-287)||(18059-18114)
[»] chr1 (29 HSPs)
chr1 (185-271)||(14238748-14238834)
chr1 (188-287)||(20241576-20241672)
chr1 (232-287)||(22131461-22131516)
chr1 (232-287)||(33796989-33797044)
chr1 (187-271)||(42911764-42911845)
chr1 (188-287)||(19675500-19675596)
chr1 (233-287)||(48602952-48603006)
chr1 (234-287)||(1925735-1925788)
chr1 (234-287)||(20229588-20229641)
chr1 (234-287)||(20924749-20924802)
chr1 (234-287)||(39244500-39244553)
chr1 (234-287)||(39248055-39248108)
chr1 (234-287)||(41388600-41388653)
chr1 (222-287)||(42911829-42911894)
chr1 (234-286)||(1010195-1010247)
chr1 (234-286)||(16376040-16376092)
chr1 (234-286)||(52639013-52639065)
chr1 (232-287)||(41781879-41781934)
chr1 (187-271)||(48519861-48519942)
chr1 (234-287)||(21406828-21406881)
chr1 (222-283)||(23967422-23967483)
chr1 (232-287)||(14238695-14238754)
chr1 (187-271)||(23967357-23967438)
chr1 (222-281)||(48519959-48520018)
chr1 (187-250)||(4597096-4597156)
chr1 (222-271)||(48519926-48519975)
chr1 (187-235)||(41781953-41782001)
chr1 (234-271)||(41781928-41781965)
chr1 (187-235)||(48602884-48602932)
[»] chr4 (35 HSPs)
chr4 (185-271)||(3484745-3484831)
chr4 (187-287)||(25090400-25090497)
chr4 (187-287)||(15042323-15042419)
chr4 (187-287)||(15112005-15112101)
chr4 (228-287)||(3484821-3484880)
chr4 (232-287)||(20160452-20160507)
chr4 (232-287)||(20163230-20163285)
chr4 (234-287)||(14954773-14954826)
chr4 (222-287)||(37018371-37018436)
chr4 (232-287)||(20157776-20157831)
chr4 (233-287)||(631334-631388)
chr4 (187-271)||(35812681-35812762)
chr4 (222-287)||(14548490-14548555)
chr4 (222-287)||(35812632-35812697)
chr4 (234-286)||(5757512-5757564)
chr4 (234-286)||(9556002-9556054)
chr4 (234-286)||(12487157-12487209)
chr4 (234-286)||(14758009-14758061)
chr4 (234-286)||(17809746-17809798)
chr4 (234-286)||(33741852-33741904)
chr4 (187-271)||(14548425-14548506)
chr4 (224-286)||(16997307-16997369)
chr4 (233-287)||(17048690-17048744)
chr4 (234-287)||(10712327-10712380)
chr4 (234-287)||(10926097-10926150)
chr4 (222-287)||(13592535-13592600)
chr4 (234-287)||(15224514-15224567)
chr4 (234-286)||(4561907-4561959)
chr4 (187-271)||(16997240-16997321)
chr4 (196-271)||(13592584-13592656)
chr4 (242-285)||(27533457-27533500)
chr4 (192-287)||(14650373-14650465)
chr4 (242-287)||(25689349-25689394)
chr4 (187-235)||(37018314-37018362)
chr4 (234-287)||(42874589-42874642)
[»] chr2 (22 HSPs)
chr2 (185-287)||(24367391-24367493)
chr2 (185-271)||(32215445-32215531)
chr2 (185-287)||(38967029-38967131)
chr2 (187-286)||(24514933-24515029)
chr2 (187-287)||(28653710-28653807)
chr2 (232-287)||(9784480-9784535)
chr2 (232-287)||(32215396-32215451)
chr2 (234-287)||(1282860-1282913)
chr2 (222-287)||(17306266-17306331)
chr2 (234-287)||(31344609-31344662)
chr2 (234-287)||(41531586-41531639)
chr2 (234-287)||(12902097-12902150)
chr2 (234-287)||(30345597-30345650)
chr2 (234-286)||(10102235-10102287)
chr2 (234-286)||(24629061-24629113)
chr2 (234-286)||(24648827-24648879)
chr2 (234-286)||(27380014-27380066)
chr2 (234-286)||(27384060-27384112)
chr2 (234-286)||(27601264-27601316)
chr2 (222-281)||(36838983-36839042)
chr2 (187-271)||(17306201-17306282)
chr2 (187-271)||(36838918-36838999)
[»] scaffold0546 (2 HSPs)
scaffold0546 (185-271)||(10607-10693)
scaffold0546 (232-283)||(10687-10738)
[»] scaffold0109 (3 HSPs)
scaffold0109 (185-271)||(1108-1194)
scaffold0109 (234-287)||(36570-36623)
scaffold0109 (232-283)||(1063-1114)
[»] scaffold0019 (1 HSPs)
scaffold0019 (187-287)||(28755-28852)
[»] scaffold0494 (2 HSPs)
scaffold0494 (196-271)||(12754-12829)
scaffold0494 (232-287)||(12705-12760)
[»] scaffold0040 (1 HSPs)
scaffold0040 (185-287)||(102305-102404)
[»] scaffold0301 (1 HSPs)
scaffold0301 (187-287)||(10663-10760)
[»] scaffold0205 (2 HSPs)
scaffold0205 (185-271)||(29205-29288)
scaffold0205 (232-287)||(29282-29337)
[»] scaffold0032 (2 HSPs)
scaffold0032 (187-267)||(63503-63583)
scaffold0032 (222-287)||(63450-63515)
[»] scaffold0034 (1 HSPs)
scaffold0034 (196-287)||(116585-116673)
[»] scaffold0203 (2 HSPs)
scaffold0203 (187-271)||(19319-19403)
scaffold0203 (222-287)||(19270-19335)
[»] scaffold0575 (3 HSPs)
scaffold0575 (232-287)||(6472-6527)
scaffold0575 (187-235)||(6546-6594)
scaffold0575 (234-271)||(6521-6558)
[»] scaffold0486 (3 HSPs)
scaffold0486 (232-287)||(9322-9377)
scaffold0486 (222-287)||(8195-8260)
scaffold0486 (187-271)||(8130-8211)
[»] scaffold0031 (3 HSPs)
scaffold0031 (232-287)||(36692-36747)
scaffold0031 (187-235)||(36766-36814)
scaffold0031 (234-271)||(36741-36778)
[»] scaffold1662 (2 HSPs)
scaffold1662 (222-287)||(629-694)
scaffold1662 (196-271)||(678-750)
[»] scaffold0452 (2 HSPs)
scaffold0452 (222-287)||(13913-13978)
scaffold0452 (187-271)||(13962-14043)
[»] scaffold0141 (2 HSPs)
scaffold0141 (234-287)||(14693-14746)
scaffold0141 (187-235)||(14767-14815)
[»] scaffold0601 (3 HSPs)
scaffold0601 (236-287)||(8037-8088)
scaffold0601 (216-267)||(8090-8141)
scaffold0601 (187-235)||(8144-8192)
[»] scaffold0016 (1 HSPs)
scaffold0016 (232-287)||(208194-208249)
[»] scaffold0013 (1 HSPs)
scaffold0013 (232-287)||(73900-73955)
[»] scaffold0012 (1 HSPs)
scaffold0012 (232-287)||(189983-190038)
[»] chr5 (19 HSPs)
chr5 (232-287)||(18355687-18355742)
chr5 (187-287)||(33896117-33896214)
chr5 (234-287)||(10752662-10752715)
chr5 (234-287)||(11220195-11220248)
chr5 (234-287)||(11228604-11228657)
chr5 (234-287)||(11230593-11230646)
chr5 (234-286)||(20295319-20295371)
chr5 (234-286)||(40724198-40724250)
chr5 (234-287)||(11224781-11224834)
chr5 (234-287)||(11226614-11226667)
chr5 (234-287)||(22107993-22108046)
chr5 (234-287)||(15237416-15237468)
chr5 (242-287)||(19473299-19473344)
chr5 (243-287)||(20911515-20911559)
chr5 (187-235)||(22108034-22108082)
chr5 (242-282)||(24767887-24767927)
chr5 (187-235)||(11224712-11224760)
chr5 (187-235)||(11230524-11230572)
chr5 (187-235)||(18355620-18355668)
[»] scaffold0142 (1 HSPs)
scaffold0142 (233-287)||(8171-8225)
[»] scaffold0124 (1 HSPs)
scaffold0124 (233-287)||(25177-25231)
[»] scaffold0111 (6 HSPs)
scaffold0111 (187-271)||(20059-20140)
scaffold0111 (222-287)||(20010-20075)
scaffold0111 (187-230)||(7057-7100)
scaffold0111 (187-230)||(14176-14219)
scaffold0111 (242-283)||(7093-7134)
scaffold0111 (242-283)||(14212-14253)
[»] scaffold1852 (1 HSPs)
scaffold1852 (234-287)||(97-150)
[»] scaffold0525 (1 HSPs)
scaffold0525 (234-287)||(4450-4503)
[»] scaffold0029 (3 HSPs)
scaffold0029 (234-287)||(62189-62242)
scaffold0029 (234-287)||(66105-66158)
scaffold0029 (234-286)||(80014-80066)
[»] scaffold0372 (1 HSPs)
scaffold0372 (234-286)||(5681-5733)
[»] scaffold0349 (1 HSPs)
scaffold0349 (234-286)||(11894-11946)
[»] scaffold0157 (1 HSPs)
scaffold0157 (234-286)||(33268-33320)
[»] scaffold0061 (3 HSPs)
scaffold0061 (234-286)||(67883-67935)
scaffold0061 (187-270)||(19663-19743)
scaffold0061 (222-287)||(19613-19678)
[»] scaffold0028 (1 HSPs)
scaffold0028 (234-286)||(59301-59353)
[»] scaffold0293 (1 HSPs)
scaffold0293 (236-287)||(20785-20836)
[»] scaffold0200 (1 HSPs)
scaffold0200 (232-287)||(11440-11495)
[»] scaffold0207 (7 HSPs)
scaffold0207 (222-284)||(15544-15606)
scaffold0207 (222-271)||(15689-15738)
scaffold0207 (208-271)||(15755-15815)
scaffold0207 (233-271)||(15590-15628)
scaffold0207 (222-271)||(15656-15705)
scaffold0207 (222-271)||(15722-15771)
scaffold0207 (223-271)||(15623-15671)
[»] scaffold0165 (2 HSPs)
scaffold0165 (233-287)||(3202-3256)
scaffold0165 (233-287)||(7265-7319)
[»] scaffold0292 (3 HSPs)
scaffold0292 (222-287)||(4433-4498)
scaffold0292 (222-271)||(4400-4449)
scaffold0292 (187-228)||(4343-4384)
[»] scaffold0073 (1 HSPs)
scaffold0073 (192-287)||(56574-56666)
[»] scaffold1633 (2 HSPs)
scaffold1633 (222-284)||(47-109)
scaffold1633 (226-271)||(18-63)
[»] scaffold0484 (1 HSPs)
scaffold0484 (233-287)||(331-385)
[»] scaffold0003 (1 HSPs)
scaffold0003 (237-287)||(70804-70854)
[»] scaffold0058 (2 HSPs)
scaffold0058 (185-256)||(925-993)
scaffold0058 (236-283)||(832-879)
[»] scaffold0278 (3 HSPs)
scaffold0278 (244-284)||(7277-7317)
scaffold0278 (187-271)||(7160-7241)
scaffold0278 (216-271)||(7219-7274)
[»] scaffold0359 (1 HSPs)
scaffold0359 (192-284)||(15118-15207)
[»] scaffold0750 (1 HSPs)
scaffold0750 (185-226)||(3649-3690)
[»] scaffold0005 (1 HSPs)
scaffold0005 (192-287)||(166827-166919)
[»] scaffold0299 (1 HSPs)
scaffold0299 (247-287)||(6426-6466)
[»] scaffold0166 (1 HSPs)
scaffold0166 (242-282)||(10384-10424)
[»] scaffold0077 (1 HSPs)
scaffold0077 (222-256)||(20953-20987)


Alignment Details
Target: chr6 (Bit Score: 99; Significance: 7e-49; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 23992078 - 23992180
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 284  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23992078 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgaatcga 23992177  T
Q  285 caa 287  Q
    |||    
T  23992178 caa 23992180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 34963021 - 34963123
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 284  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34963021 tattcataagtacttcattaacaacatatggatagaatacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 34963120  T
Q  285 caa 287  Q
    |||    
T  34963121 caa 34963123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 187 - 287
Target Start/End: Complemental strand, 27126706 - 27126606
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  27126706 ttcataagcacttcattaacaacacgtggatagaagacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgaca 27126607  T
Q  287 a 287  Q
    |    
T  27126606 a 27126606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 17105242 - 17105325
Alignment:
Q  188 tcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||  | |||||||||||    
T  17105242 tcataagcacttcattaacaacacatggatagaagacaactcaataacaacttaacaactcgtggatgacgactcatcaacaac 17105325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 22074622 - 22074567
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22074622 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 22074567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 7825392 - 7825489
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||| ||||||||||| || | ||||||||||||||||||||   ||||||||||||| ||||||| || ||||||||||||||||||| ||||||    
T  7825392 ttcataagcacttcattaacaactcgtggatagaagacaactcaac---aacttaacaactcgtggatgacaactcatcaacaacgactttgattcgaca 7825488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 2076944 - 2076997
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2076944 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 2076997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 22805442 - 22805507
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  22805442 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 22805507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 23414377 - 23414430
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23414377 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 23414430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 17105344 - 17105407
Alignment:
Q  224 caactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17105344 caactcatcgacaacttaacaactcatggatgacaattcatcaacaacgactttgactcgacaa 17105407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 17742764 - 17742845
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| |||| ||||||||||||||||   |||||||||||||||||||||| || ||||||||||||||    
T  17742764 ttcataagcacttcattaacaacacgtggatagaagacaact---caacaacttaacaactcatggaggacaattcatcaacaac 17742845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 1643982 - 1644035
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1643982 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 1644035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 16623826 - 16623879
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16623826 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 16623879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 19774125 - 19774060
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||  ||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  19774125 gacaactcgtcaacaacttaacaactcatggatgacaagtcatcaacaacgactttgactcgacaa 19774060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 31478618 - 31478565
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31478618 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 31478565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 8243305 - 8243357
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8243305 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 8243357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 11566334 - 11566386
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11566334 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 11566386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 12619476 - 12619424
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12619476 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 12619424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 22862418 - 22862470
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22862418 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 22862470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 23394540 - 23394592
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23394540 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 23394592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 23989392 - 23989444
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23989392 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 23989444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 19774190 - 19774109
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| |||||||| |||||||||||||||   |||||||||||||||||||||| || || ||||||||    
T  19774190 ttcataagcacttcattaacaacacatgggtagaagacaactcaa---caacttaacaactcatggatgacaactcgtcaacaac 19774109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 22805377 - 22805458
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| |||||||| ||||||||||||   |||||||||||| |||||||||||| || |||||||||||    
T  22805377 ttcataagcacttcattaacaacacatgggtagaagacaact---caacaacttaacgactcatggatgacaactcatcaacaac 22805458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 14471685 - 14471738
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  14471685 acaacttaacaactcatagatgatagttcatcaacaacgactttgactcgacaa 14471738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 15706001 - 15705936
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||||||||| ||||||| |||||    
T  15706001 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgaatttgacttgacaa 15705936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 19870062 - 19870114
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  19870062 acaacttaacaactcgtggatgataattcatcaacaacgaccttgactcgaca 19870114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 17742872 - 17742923
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcg 283  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  17742872 caacaacttaacaactcatggatgacaactcatcaacaacgactttgactcg 17742923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 23538247 - 23538302
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||    
T  23538247 caacaacttaacaactcttggatgataattcatcaacaacgaatttgactagacaa 23538302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 15706099 - 15706018
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| |||||||| |||||||||||||||   ||||||||| |||||| ||||| || |||||||||||    
T  15706099 ttcataagcacttcattaacaacacatgggtagaagacaactcaa---caacttaacgactcatagatgacaactcatcaacaac 15706018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 20182325 - 20182407
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| |||||||| || |||||||| |||||||||||||||||||   ||||||||||||| |||| |||||||| |||||    
T  20182325 ttcataagcacttcatttacaacacatgggtagaagacaactcaacaac--tttaacaactcatgtatgacaattcatcgacaac 20182407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 22153666 - 22153584
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| |||||||| || |||||||| |||||||||||||||||||   ||||||||||||| |||| |||||||| |||||    
T  22153666 ttcataagcacttcatttacaacacatgggtagaagacaactcaacaac--tttaacaactcatgtatgacaattcatcgacaac 22153584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 27416557 - 27416508
Alignment:
Q  237 acttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  27416557 acttaacaactcatagatgataattcatcaacaacgacttcgactcgaca 27416508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 19656673 - 19656621
Alignment:
Q  235 caacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  19656673 caacttaacaactcatggatgacaactcatcgacaacgactttgactcgacaa 19656621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 271
Target Start/End: Complemental strand, 19656761 - 19656695
Alignment:
Q  202 ttaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||| || |||||||||||||||||||||||||   |||||||||||||||||| |||| |||||||||    
T  19656761 ttaacaactcatggatagaagacaactcaacaac---ttaacaactcatggatgacaatttatcaacaac 19656695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 19656819 - 19656762
Alignment:
Q  211 catggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||||||||||||||||||||   ||| |||||||||||||| ||||||||||||||    
T  19656819 catggatagaagacaactcaacaac---ttagcaactcatggatgacaattcatcaacaac 19656762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 287
Target Start/End: Original strand, 22948563 - 22948608
Alignment:
Q  242 acaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||    
T  22948563 acaactcatagatgataattcatcaacaacgaccttgactcgacaa 22948608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 287
Target Start/End: Original strand, 22952519 - 22952564
Alignment:
Q  242 acaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||    
T  22952519 acaactcatagatgataattcatcaacaacgaccttgactcgacaa 22952564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 287
Target Start/End: Original strand, 23871007 - 23871052
Alignment:
Q  242 acaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||    
T  23871007 acaactcatagatgataattcatcaacaacgaccttgactcgacaa 23871052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 287
Target Start/End: Original strand, 23874963 - 23875008
Alignment:
Q  242 acaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||    
T  23874963 acaactcatagatgataattcatcaacaacgaccttgactcgacaa 23875008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 19656869 - 19656821
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  19656869 ttcataagcacttcattaacaacacatagatagaagacaactcaacaac 19656821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 271
Target Start/End: Complemental strand, 15706040 - 15705985
Alignment:
Q  216 atagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||| ||||||||| |||||||||||| |||||||||||| || |||||||||||    
T  15706040 atagatgacaactcatcaacaacttaaccactcatggatgacaactcatcaacaac 15705985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 276
Target Start/End: Original strand, 16759742 - 16759784
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactt 276  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  16759742 acaacttaacagctaatggatgataattcatcaacaacgactt 16759784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 2076875 - 2076923
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| |||||||||||||||||||    
T  2076875 ttcataggtacttctttaacaacacatgggtagaagacaactcaacaac 2076923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 248 - 287
Target Start/End: Complemental strand, 18918029 - 18917990
Alignment:
Q  248 catggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||| ||||||||||||||| ||||    
T  18918029 catggatgataattcatcaccaacgactttgactcaacaa 18917990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 271
Target Start/End: Original strand, 16759709 - 16759746
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  16759709 acaacttaacaactaatggatgataattcatcgacaac 16759746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 17742829 - 17742878
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||| ||| ||||||||| ||||||||||||||  ||||||||||||||    
T  17742829 gacaattcatcaacaactttacaactcatggatgtcaattcatcaacaac 17742878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 271
Target Start/End: Original strand, 23538216 - 23538253
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||||||||||||| || |||||||||||||||||||    
T  23538216 acaacttaacaactcttgaatgataattcatcaacaac 23538253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 287
Target Start/End: Original strand, 27556159 - 27556188
Alignment:
Q  258 aattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||    
T  27556159 aattcatcaacaacgactttgactcgacaa 27556188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 7e-49; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 185 - 283
Target Start/End: Original strand, 13543630 - 13543728
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13543630 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcg 13543728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 46821872 - 46821974
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 284  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46821872 tattcataagtacttcattaactacacatggatagaagataactcaataacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 46821971  T
Q  285 caa 287  Q
    |||    
T  46821972 caa 46821974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 185 - 287
Target Start/End: Complemental strand, 12120275 - 12120173
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 284  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||| |    
T  12120275 tattcataagtacttcattaacgacacatggatagaaaacaactcaacaacttcataacaactcatggatgataattcatcaacaacgactttgactcaa 12120176  T
Q  285 caa 287  Q
    |||    
T  12120175 caa 12120173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 185 - 287
Target Start/End: Complemental strand, 38962393 - 38962291
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 284  Q
    |||||||||||||||||||||| |||| ||||||||||||| |||||||||  | |||||||||||| ||||||||||||||||||||||||||||||||    
T  38962393 tattcataagtacttcattaacaacacgtggatagaagacatctcaacaacttcataacaactcatgaatgataattcatcaacaacgactttgactcga 38962294  T
Q  285 caa 287  Q
    |||    
T  38962293 caa 38962291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 187 - 278
Target Start/End: Complemental strand, 19884907 - 19884816
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttg 278  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  19884907 ttcataagcacttcattaacaacacgtggatagaagacaactcaacaacaacttaacaactcatggatgacaactcatcaacaacgactttg 19884816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 35353317 - 35353414
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||||   ||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  35353317 ttcataagcacttcattaacaacacgtggatagaagacaactcaac---aacttaacaactcatggatgacaactcatcaacaacgactttgactcgaca 35353413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 18701002 - 18700918
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||| || ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  18701002 ttcatgagcacttcattaacaacacatgggtagaagacaactcaacaacaacttaacaactcatggatgacaactcatcaacaac 18700918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 14668279 - 14668334
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14668279 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 14668334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 15464572 - 15464627
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15464572 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 15464627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 10562435 - 10562532
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||| |||||||| || |||  ||||||||||||||||||||   ||||||| ||||||||||||| || ||||||||||||||||||||||||||    
T  10562435 ttcataagcacttcatttacaacatgtggatagaagacaactcaac---aacttaataactcatggatgacaactcatcaacaacgactttgactcgaca 10562531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 287
Target Start/End: Complemental strand, 42353776 - 42353679
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||| ||||||| ||| |||| ||||||||| |||||||| ||||   |||||||||||||||||| || ||||||||||||||||||||||||||    
T  42353776 ttcataagcacttcatcaacaacacgtggatagaaaacaactcatcaac---ttaacaactcatggatgacaactcatcaacaacgactttgactcgaca 42353680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 10543079 - 10543014
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  10543079 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 10543014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 14670533 - 14670598
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14670533 gacaactcgtcaacaacttaacaactcatggatgacaattcatcaacaacgactttgactcgacaa 14670598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 15964419 - 15964472
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15964419 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 15964472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 15968343 - 15968396
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15968343 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 15968396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 15972267 - 15972320
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15972267 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 15972320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 18700934 - 18700869
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  18700934 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 18700869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 12339173 - 12339225
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12339173 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 12339225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 5222795 - 5222850
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5222795 caacaacttaacaactcatggatgataatttatcaacaacgactttgactcgacaa 5222850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 14665123 - 14665178
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14665123 caacaacttaacaactcatgaatgataattcatcaacaacgactttgactcgacaa 14665178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 2842726 - 2842664
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 284  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  2842726 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcga 2842664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 16750975 - 16750922
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16750975 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 16750922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 19775042 - 19775095
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19775042 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 19775095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 37440271 - 37440218
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37440271 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 37440218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 7109171 - 7109223
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7109171 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 7109223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 7113106 - 7113158
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7113106 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 7113158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 8489820 - 8489768
Alignment:
Q  235 caacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8489820 caacttaacaactcatggatgaaaattcatcaacaacgactttgactcgacaa 8489768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 11069543 - 11069595
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11069543 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 11069595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 14498800 - 14498852
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14498800 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 14498852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 15616849 - 15616901
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15616849 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 15616901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 22321139 - 22321191
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22321139 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 22321191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 22336194 - 22336246
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22336194 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 22336246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 27410278 - 27410226
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27410278 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 27410226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 28949197 - 28949249
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28949197 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 28949249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 55022340 - 55022392
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  55022340 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 55022392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 14682065 - 14682120
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  14682065 caacaacttaacaactcatgcatgacaattcatcaacaacgactttgactcgacaa 14682120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 2842791 - 2842710
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||   |||||| ||||||||||||||| || |||||||||||    
T  2842791 ttcataagcacttcattaacaacacgtggatagaagacaactcaa---caactttacaactcatggatgacaactcatcaacaac 2842710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 233 - 287
Target Start/End: Complemental strand, 12852945 - 12852891
Alignment:
Q  233 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  12852945 aacaacttaacaactcatggatgataattcatcaacaataactttgactcgacaa 12852891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 4589547 - 4589494
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  4589547 acaacttaacaactcatagatgataattcatcaacaacaactttgactcgacaa 4589494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 4108033 - 4107985
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactc 282  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4108033 acaacttaacaactcatggatgataattcatcaacaacgaccttgactc 4107985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 4111885 - 4111837
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactc 282  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4111885 acaacttaacaactcatggatgataattcatcaacaacgaccttgactc 4111837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 11166163 - 11166111
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  11166163 acaacttaacaactcatggatgataattcatcaacaacgaccttgaatcgaca 11166111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 16795985 - 16796036
Alignment:
Q  236 aacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  16795985 aacttaacaactcatggatgataattcatcaacaacgacttcgactagacaa 16796036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 287
Target Start/End: Complemental strand, 17317759 - 17317709
Alignment:
Q  237 acttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  17317759 acttaacaattcatggatgataattcatcaacaacgaccttgactcgacaa 17317709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 5214723 - 5214776
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||| || |||||||||||||||||||||||||||    
T  5214723 acaacttaataactcatggatgacaactcatcaacaacgactttgactcgacaa 5214776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 13521027 - 13520978
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  13521027 gacaactcatcaacaacttaacaactcatggatgaaaattcatcaacaac 13520978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 43890244 - 43890179
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||  ||||||||||||||  ||||||||| || |||||||||||||||||||||||||||    
T  43890244 gacaactcgtcaacaacttaacaatccatggatgacaactcatcaacaacgactttgactcgacaa 43890179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 15565259 - 15565338
Alignment:
Q  189 cataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||| ||||||||||| |||||||| |||||  |||||||||   ||||||||||||| ||||||| ||||||||||||||    
T  15565259 cataagcacttcattaacaacacatgggtagaattcaactcaac---aacttaacaactcgtggatgacaattcatcaacaac 15565338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 14681990 - 14682056
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatga 256  Q
    |||||| ||||||| ||||| |||||||| ||||||||||||   |||||||||||||||||||||||||    
T  14681990 ttcataggtacttctttaacaacacatgggtagaagacaact---caacaacttaacaactcatggatga 14682056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 14441047 - 14441104
Alignment:
Q  211 catggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||||||||||| |||||   ||||||||||||||||||||| ||||||||||||||    
T  14441047 catggatagaagacaaatcaac---aacttaacaactcatggatgacaattcatcaacaac 14441104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 14441088 - 14441153
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||| ||| ||||||||||||| ||||||||| | || ||||| |||||||||||||||||||||    
T  14441088 gacaattcatcaacaacttaacagctcatggataacaactcatcgacaacgactttgactcgacaa 14441153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 287
Target Start/End: Original strand, 44269408 - 44269453
Alignment:
Q  242 acaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||| || |||||||||||||||||||||||||||    
T  44269408 acaactcatggatgacaactcatcaacaacgactttgactcgacaa 44269453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 14440997 - 14441045
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||||| |||| |||||| ||||||||||||||||||||||||||||    
T  14440997 ttcataagcactttattaacaacacatggatagaagacaactcaacaac 14441045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 5214657 - 5214723
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatga 256  Q
    |||||||| ||||||||||| |||| | ||||||| ||||||   |||||||||||||||||||||||||    
T  5214657 ttcataagcacttcattaacaacacgtagatagaaaacaact---caacaacttaacaactcatggatga 5214723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 10543144 - 10543097
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaa 234  Q
    |||||||| ||||||||||| |||||||| ||||||||||||||||||    
T  10543144 ttcataagcacttcattaacaacacatgggtagaagacaactcaacaa 10543097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 287
Target Start/End: Original strand, 30065432 - 30065475
Alignment:
Q  244 aactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||||| |||||||| ||||||||||||    
T  30065432 aactcatggatgataattcatcgacaacgaccttgactcgacaa 30065475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 14670468 - 14670549
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||| ||||||| ||||| |||||||| | ||||||||||   |||||||| |||||||||||||||| || || ||||||||    
T  14670468 ttcataggtacttctttaacaacacatgggttgaagacaact---caacaactcaacaactcatggatgacaactcgtcaacaac 14670549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 43890342 - 43890261
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||| ||| |||||||| ||||||||||||||   |||| ||||| ||||||| |||| || |||||||||||    
T  43890342 ttcataagcacttcataaacaacacatgggtagaagacaactca---acaaattaacgactcatgaatgacaactcatcaacaac 43890261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 43890277 - 43890228
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||||||| ||||||||||||||||||||||||| || || ||||||||    
T  43890277 gacaactcatcaacaacttaacaactcatggatgacaactcgtcaacaac 43890228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 271
Target Start/End: Original strand, 12339142 - 12339179
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  12339142 acaactcaacaactcatagatgataattcatcaacaac 12339179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 15565322 - 15565371
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||| ||| ||||||| |||||||||| |||||| ||||||||||||||    
T  15565322 gacaattcatcaacaacctaacaactcacggatgacaattcatcaacaac 15565371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 8489887 - 8489839
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| ||||||||||||| |||||    
T  8489887 ttcataggtacttctttaacaacacatgggtagaagacaactcgacaac 8489839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 12339107 - 12339154
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| |||||||||||||||||||    
T  12339107 ttcataggtacttctttaacaacacatgg-tagaagacaactcaacaac 12339154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 14665056 - 14665104
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| ||||||||||||| |||||    
T  14665056 ttcataggtacttctttaacaacacatgggtagaagacaactcgacaac 14665104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 37440340 - 37440292
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| ||||||||||||| |||||    
T  37440340 ttcataggtacttctttaacaacacatgggtagaagacaactcgacaac 37440292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 9e-42; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 32121394 - 32121480
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32121394 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 32121480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 21386803 - 21386858
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21386803 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 21386858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 23913741 - 23913796
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23913741 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 23913796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 18863304 - 18863251
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18863304 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 18863251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 21828673 - 21828620
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21828673 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 21828620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 30940736 - 30940683
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30940736 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 30940683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 14398484 - 14398429
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14398484 caacaacttaacaattcatggatgataattcatcaacaacgactttgactcgacaa 14398429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 32121474 - 32121529
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32121474 caacaacttaacaactcatggatgataattcctcaacaacgactttgactcgacaa 32121529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 21410397 - 21410450
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21410397 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 21410450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 21804889 - 21804942
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21804889 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 21804942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 16413884 - 16413809
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||    
T  16413884 tattcataagtacttcattaactacacatggatagaagac-----------aacttaacaactcatggatgataattcatcaacaac 16413809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 21973215 - 21973163
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21973215 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 21973163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 21977306 - 21977254
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21977306 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 21977254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 22111403 - 22111455
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22111403 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 22111455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 43251283 - 43251335
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43251283 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 43251335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 16413815 - 16413760
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  16413815 caacaacttaataactcatgtatgataattcatcaacaacgactttgactcgacaa 16413760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 37515157 - 37515238
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| | | ||||||| |||||||||||||||||||||   |||||||||||||||||||| |||| ||||||||||||||    
T  37515157 ttcataagcaatacattaacaacacatggatagaagacaact---caacaacttaacaactcatgaatgacaattcatcaacaac 37515238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 42819237 - 42819156
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| |||  |||||||||||||||||||   |||||||||||||||||||||| || |||||||||||    
T  42819237 ttcataagcacttcattaacaacatgtggatagaagacaactcaa---caacttaacaactcatggatgacaactcatcaacaac 42819156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 233 - 287
Target Start/End: Complemental strand, 44385281 - 44385227
Alignment:
Q  233 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  44385281 aacaacttaacaactcatgaatgataattcatcaacaacgactttgacttgacaa 44385227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 42819172 - 42819107
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||||||| |||| ||||||||||    
T  42819172 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacaacttggactcgacaa 42819107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 18833039 - 18833118
Alignment:
Q  189 cataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||| ||||||||||| |||| ||||||||||||||||   ||||||||||||||||||||||||| || || ||||||||    
T  18833039 cataagcacttcattaacaacacgtggatagaagacaact---caacaacttaacaactcatggatgacaactcgtcaacaac 18833118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 18833102 - 18833161
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgact 281  Q
    ||||||||  ||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  18833102 gacaactcgtcaacaacttaacaactcatggatgacaactcatcaacaacaactttgact 18833161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 5760180 - 5760237
Alignment:
Q  211 catggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||||||||||| ||||||||   ||||||||||||||||||||| ||||||||||||||    
T  5760180 catggatagaagataactcaac---aacttaacaactcatggatgacaattcatcaacaac 5760237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 5760131 - 5760172
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaact 228  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  5760131 ttcataagcacttcattaacaacacatggatagaagacaact 5760172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 287
Target Start/End: Complemental strand, 19930066 - 19929978
Alignment:
Q  196 acttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||| |||||| || |||||| ||||||||||| ||||||   || ||||||||||||| | || | || ||||||||||||||||||||||    
T  19930066 acttaattaacaactcatggagagaagacaacttaacaac---ttgacaactcatggataacaacttattaacaacgactttgactcgacaa 19929978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 267
Target Start/End: Complemental strand, 6102924 - 6102856
Alignment:
Q  196 acttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaa 267  Q
    |||| |||||| |||| ||| |||||||| ||||||||||   |||||||||||||||||| || |||||||    
T  6102924 actttattaacaacacgtgggtagaagacgactcaacaac---ttaacaactcatggatgacaactcatcaa 6102856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 271
Target Start/End: Original strand, 23913710 - 23913747
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  23913710 acaaattaacaactcatagatgataattcatcaacaac 23913747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 18863373 - 18863325
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| ||||||||||||| |||||    
T  18863373 ttcataggtacttctttaacaacacatgggtagaagacaactcgacaac 18863325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 21828742 - 21828694
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| ||||||||||||| |||||    
T  21828742 ttcataggtacttctttaacaacacatgggtagaagacaactcgacaac 21828694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 9e-42; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 24274740 - 24274826
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24274740 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 24274826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 185 - 287
Target Start/End: Complemental strand, 15082425 - 15082324
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 284  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||||||||    
T  15082425 tattcataagtacttcattaataacacatggatagaagacaactcaacaacttcataacaactcatggatgataattcatc-acaacgactttgactcga 15082327  T
Q  285 caa 287  Q
    |||    
T  15082326 caa 15082324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 14933201 - 14933118
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  14933201 tattcataagtactttattaacaacacatggatagaagacaactcaa---caacttaacaactcatggatgataattcatcaacaac 14933118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 15356636 - 15356553
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  15356636 tattcataagtactttattaacaacacatggatagaagacaactcaa---caacttaacaactcatggatgataattcatcaacaac 15356553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 15360750 - 15360667
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  15360750 tattcataagtactttattaacaacacatggatagaagacaactcaa---caacttaacaactcatggatgataattcatcaacaac 15360667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 187 - 287
Target Start/End: Complemental strand, 14183916 - 14183819
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||||||   |||||||||||||||||| || | ||||| ||||||||||||||||||    
T  14183916 ttcataagcacttcattaacaacacgtggatagaagacaactcaacaac---ttaacaactcatggatgacaactaatcaaaaacgactttgactcgaca 14183820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 32300761 - 32300858
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||| ||||||||||| |||||||| ||||||||||||||||   |||||||| |||||||||||| || |||||||||||||||||||||| |||    
T  32300761 ttcataagcacttcattaacaacacatgggtagaagacaactcaac---aacttaacgactcatggatgacaactcatcaacaacgactttgactcaaca 32300857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 20487266 - 20487321
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20487266 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 20487321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 16579267 - 16579332
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  16579267 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 16579332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 16585166 - 16585231
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  16585166 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 16585231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 16586395 - 16586330
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  16586395 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 16586330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 45170665 - 45170612
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45170665 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 45170612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 1859458 - 1859406
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1859458 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 1859406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 13919129 - 13919077
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13919129 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 13919077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 2530790 - 2530735
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2530790 caacaacttaacaattcatggatgataattcatcaacaacgactttgactcgacaa 2530735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 24274820 - 24274875
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24274820 caacaacttaacaactcatggatgataattcctcaacaacgactttgactcgacaa 24274875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 25927873 - 25927822
Alignment:
Q  236 aacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25927873 aacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 25927822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 14257837 - 14257918
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| |||||||| ||||||||||||   ||||||||||||||||||||||||| ||||| ||||||||    
T  14257837 ttcataagcacttcattaacaacacatgggtagaagacaact---caacaacttaacaactcatggatgacaattcgtcaacaac 14257918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 233 - 287
Target Start/End: Original strand, 18301772 - 18301826
Alignment:
Q  233 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18301772 aacaacttaacaactcatggatgataattcatcaacaatgactttgactcgacaa 18301826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 12705293 - 12705240
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12705293 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 12705240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 15083643 - 15083696
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15083643 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 15083696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 20585214 - 20585279
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||| ||||||||||||||||    
T  20585214 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaatgactttgactcgacaa 20585279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 26291844 - 26291897
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26291844 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 26291897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 32581 - 32633
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32581 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 32633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 71401 - 71349
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  71401 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 71349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 75510 - 75458
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  75510 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 75458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 12718140 - 12718192
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12718140 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 12718192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 12723051 - 12723103
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12723051 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 12723103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 16113713 - 16113765
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16113713 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 16113765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 16116866 - 16116918
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16116866 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 16116918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 16907845 - 16907793
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16907845 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 16907793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 18282838 - 18282890
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18282838 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 18282890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 2832833 - 2832778
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  2832833 caacaacttaacaaatcatggatgataattcatcaacaacgactttgacttgacaa 2832778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 16585101 - 16585182
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| |||||||| ||||||||||||   |||||||||||| |||||||||||| || |||||||||||    
T  16585101 ttcataagcacttcattaacaacacatgggtagaagacaact---caacaacttaacgactcatggatgacaactcatcaacaac 16585182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 20585149 - 20585230
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| |||  ||||||||||||||||   ||||||||||||||||||||||||| || |||||||||||    
T  20585149 ttcataagcacttcattaacaacatgtggatagaagacaact---caacaacttaacaactcatggatgacaactcatcaacaac 20585230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 18425132 - 18425185
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  18425132 acaacttaacaactcatggatgataactcatcaacaacgaccttgactcgacaa 18425185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 39721713 - 39721766
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  39721713 acaacttaacaactcatggatgataattcattaacaacgaccttgactcgacaa 39721766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 18278875 - 18278927
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  18278875 acaacttaacaactcatggatgataattcatcaacaacgaccttgacttgaca 18278927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 14257945 - 14257996
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcg 283  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  14257945 caacaacttaacaactcatggatgacaactcatcaacaacgactttgactcg 14257996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 15605928 - 15605873
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||| || |||||||||||||||||||||||||||||| |||||||||||||    
T  15605928 caacaactcaaaaactcatggatgataattcatcaacaacgaatttgactcgacaa 15605873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 287
Target Start/End: Complemental strand, 16461554 - 16461500
Alignment:
Q  233 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||| ||||    
T  16461554 aacaacttaacaactcatggatgacaactcatcaacaacgactttgactcaacaa 16461500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 12466538 - 12466473
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| | ||||||||||||||||||||||| || |||||||||| |||||||| |||||||    
T  12466538 gacaactcatccacaacttaacaactcatggatgacaactcatcaacaatgactttgattcgacaa 12466473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 12466600 - 12466522
Alignment:
Q  190 ataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||| ||||||||||| |||| |||||||||||||||||||   ||||||||||||||||| |||| || ||||| |||||    
T  12466600 ataagcacttcattaacaacacgtggatagaagacaactcaa---caacttaacaactcatgtatgacaactcatccacaac 12466522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 16579202 - 16579283
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| |||||  |||| |||| ||| ||||||||||||||||   |||||||| |||||||||||| || |||||||||||    
T  16579202 ttcataagcacttcgataacaacacctgggtagaagacaactcaac---aacttaacgactcatggatgacaactcatcaacaac 16579283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 20487199 - 20487247
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| |||||||||||||||||||    
T  20487199 ttcataggtacttctttaacaacacatgggtagaagacaactcaacaac 20487247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 25927946 - 25927898
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| |||||||||||||||||||    
T  25927946 ttcataggtacttctttaacaacacatgggtagaagacaactcaacaac 25927898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 14257912 - 14257951
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  14257912 caacaacttaacaactcatggatgacaattcctcaacaac 14257951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 16586444 - 16586379
Alignment:
Q  203 taactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||| |||| ||| |||||||||||||||||||   ||||| |||||||||||| || |||||||||||    
T  16586444 taacaacacctgggtagaagacaactcaacaac---ttaacgactcatggatgacaactcatcaacaac 16586379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 271
Target Start/End: Original strand, 20487235 - 20487272
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  20487235 acaactcaacaactcatagatgataattcatcaacaac 20487272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 7519743 - 7519695
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| ||||||||||||| |||||    
T  7519743 ttcataggtacttctttaacaacacatgggtagaagacaactcgacaac 7519695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 12705362 - 12705314
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| ||||||||||||| |||||    
T  12705362 ttcataggtacttctttaacaacacatgggtagaagacaactcgacaac 12705314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 13919198 - 13919150
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| ||||||||||||| |||||    
T  13919198 ttcataggtacttctttaacaacacatgggtagaagacaactcgacaac 13919150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 15083574 - 15083622
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| ||||||||||||| |||||    
T  15083574 ttcataggtacttctttaacaacacatgggtagaagacaactcgacaac 15083622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 39721644 - 39721692
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| ||||||||||||| |||||    
T  39721644 ttcataggtacttctttaacaacacatgggtagaagacaactcgacaac 39721692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 18194 - 18108
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18194 tattcataagtacttcattaaatacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 18108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 18114 - 18059
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18114 caacaacttaacaactcaaggatgataattcatcaacaacgactttgactcgacaa 18059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 14238834 - 14238748
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14238834 tattcataagtacttcattaacaacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 14238748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 188 - 287
Target Start/End: Original strand, 20241576 - 20241672
Alignment:
Q  188 tcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||||   |||||||||||||||||| || || |||||||||||||||||||||||||||    
T  20241576 tcataagcacttcattaacaacacgtggatagaagacaactcaac---aacttaacaactcatggacgacaactcatcaacaacgactttgactcgacaa 20241672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 22131516 - 22131461
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22131516 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 22131461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 33796989 - 33797044
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33796989 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 33797044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 42911764 - 42911845
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| |||| ||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||    
T  42911764 ttcataagcacttcattaacaacacgtggatagaagacaact---caacaacttaacaactcatggatgacaattcatcaacaac 42911845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 188 - 287
Target Start/End: Original strand, 19675500 - 19675596
Alignment:
Q  188 tcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||| ||||||||||| |||  |||||| || ||||||||||   ||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  19675500 tcataagcacttcattaacaacatgtggatataaaacaactcaac---aacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 19675596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 233 - 287
Target Start/End: Original strand, 48602952 - 48603006
Alignment:
Q  233 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48602952 aacagcttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 48603006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 1925788 - 1925735
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1925788 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 1925735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 20229641 - 20229588
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20229641 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 20229588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 20924802 - 20924749
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20924802 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 20924749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 39244553 - 39244500
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39244553 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 39244500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 39248108 - 39248055
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39248108 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 39248055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 41388653 - 41388600
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41388653 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 41388600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 42911829 - 42911894
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  42911829 gacaattcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 42911894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 1010195 - 1010247
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1010195 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 1010247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 16376092 - 16376040
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16376092 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 16376040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 52639013 - 52639065
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  52639013 acaacttaacaactcatggatgataattcatcaacaacgacattgactcgaca 52639065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 41781934 - 41781879
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  41781934 caacaacttaacaactcatggatgataattcatcaacaacagctttgactcgacaa 41781879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 48519861 - 48519942
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| |||| ||||||||||||||||   ||||||||||||||||||||||||| || || ||||||||    
T  48519861 ttcataagcacttcattaacaacacgtggatagaagacaact---caacaacttaacaactcatggatgacaactcgtcaacaac 48519942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 21406828 - 21406881
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  21406828 acaacttaacaactcatggatgataattcatcaacaacgaccttaactcgacaa 21406881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 23967422 - 23967483
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcg 283  Q
    ||||| ||| ||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  23967422 gacaattcagcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcg 23967483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 14238754 - 14238695
Alignment:
Q  232 caacaacttaacaactcatggatgata----attcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||||||||||    |||||||||||||||||||||||||||||    
T  14238754 caacaacttaacaactcatggatgatatataattcatcaacaacgactttgactcgacaa 14238695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 23967357 - 23967438
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||||||||||||||| ||||||   ||||||||||||   |||| |||||||||||||||||||| |||||| |||||||    
T  23967357 ttcataagtacttcattaacaacacatatgtagaagacaact---caactacttaacaactcatggatgacaattcagcaacaac 23967438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 48519959 - 48520018
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgact 281  Q
    ||||| ||| ||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  48519959 gacaattcatcaacaacttaacaactcatggatgacaactcatcaacaacaactttgact 48520018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 4597156 - 4597096
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcat 250  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||   ||||||||||||||||    
T  4597156 ttcataagcacttcattaacaacacgtggatagaagacaactcaa---caacttaacaactcat 4597096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 48519926 - 48519975
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||||||  ||||||| ||||||||||||||||| ||||||||||||||    
T  48519926 gacaactcgtcaacaacctaacaactcatggatgacaattcatcaacaac 48519975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 41782001 - 41781953
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| |||||||||||||||||||    
T  41782001 ttcataggtacttctttaacaacacatgggtagaagacaactcaacaac 41781953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 271
Target Start/End: Complemental strand, 41781965 - 41781928
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  41781965 acaactcaacaactcatagatgataattcatcaacaac 41781928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 48602884 - 48602932
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| |||||||||||||| ||||    
T  48602884 ttcataggtacttctttaacaacacatgggtagaagacaactcagcaac 48602932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 6e-37; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 3484745 - 3484831
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3484745 tattcataagtacttcattaacaacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcaacaacaac 3484831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 25090400 - 25090497
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||| ||||||||||| |||  ||||||||||||||||||||   ||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  25090400 ttcataagcacttcattaacaacaagtggatagaagacaactcaac---aacttaacaactcatggatgacaactcatcaacaacgactttgactcgaca 25090496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 187 - 287
Target Start/End: Complemental strand, 15042419 - 15042323
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||| ||||||||||| |||| |||||||| ||||||||||||||   |||||||||||||||||| || ||||||||||||||||||||||||||    
T  15042419 ttcataagcacttcattaacaacacgtggataga-gacaactcaacaac---ttaacaactcatggatgacaactcatcaacaacgactttgactcgaca 15042324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 15112005 - 15112101
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||| ||||||||||| |||| |||||||| |||||||||||   ||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  15112005 ttcataagcacttcattaacaacacgtggataga-gacaactcaac---aacttaacaactcatggatgacaactcatcaacaacgactttgactcgaca 15112100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 3484821 - 3484880
Alignment:
Q  228 tcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3484821 tcaacaacaacttaacagctcatggatgataattcatcaacaacgactttgactcgacaa 3484880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 20160507 - 20160452
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20160507 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 20160452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 20163285 - 20163230
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20163285 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 20163230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 14954826 - 14954773
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14954826 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 14954773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 37018371 - 37018436
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  37018371 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 37018436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 20157831 - 20157776
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20157831 caacaacttaacaactcatggatgataattcatcaacaacgagtttgactcgacaa 20157776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 233 - 287
Target Start/End: Complemental strand, 631388 - 631334
Alignment:
Q  233 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  631388 aacaacttaacaactcatggatgataattcatcaacaatgactttgactcgacaa 631334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 35812762 - 35812681
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||   ||||||||||| |||||||||| || |||||||||||    
T  35812762 ttcataagcacttcattaacaacacatggatagaagacaactcaa---caacttaacaattcatggatgacaactcatcaacaac 35812681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 14548490 - 14548555
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| |||||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  14548490 gacaactcatcaacaacttaacaactcaaggatgacaactcatcaacaacgactttgactcgacaa 14548555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 35812697 - 35812632
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||||||||||||||||||||||    
T  35812697 gacaactcatcaacaacttaacaactcatggatgacgactcatcaacaacgactttgactcgacaa 35812632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 5757564 - 5757512
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5757564 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 5757512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 9556002 - 9556054
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9556002 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 9556054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 12487157 - 12487209
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12487157 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 12487209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 14758061 - 14758009
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14758061 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 14758009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 17809746 - 17809798
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17809746 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 17809798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 33741852 - 33741904
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33741852 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 33741904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 14548425 - 14548506
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| |||| ||||||||||||||||   |||||||||| |||||||||||||| || |||||||||||    
T  14548425 ttcataagcacttcattaacaacacgtggatagaagacaact---caacaacttagcaactcatggatgacaactcatcaacaac 14548506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 224 - 286
Target Start/End: Original strand, 16997307 - 16997369
Alignment:
Q  224 caactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||| ||||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  16997307 caactcatcaacaacttaacaactcatggatgacaactcattaacaacgactttgactcgaca 16997369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 233 - 287
Target Start/End: Complemental strand, 17048744 - 17048690
Alignment:
Q  233 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  17048744 aacaacttaacaactcgtggatgataattcatcaacaacgactttgaatcgacaa 17048690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 10712327 - 10712380
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  10712327 acaacttaacaactcgtggatgataattcatcaacaacgaccttgactcgacaa 10712380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 10926097 - 10926150
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  10926097 acaacttaacaactcgtggatgataattcatcaacaacgaccttgactcgacaa 10926150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 13592600 - 13592535
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||||||||||||||||| ||||    
T  13592600 gacaactcatcaacaacttaacaactcatggatgacgactcatcaacaacgactttgactcaacaa 13592535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 15224514 - 15224567
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  15224514 acaacttaacaactcatggatgataattcatcaacagcgaccttgactcgacaa 15224567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 4561959 - 4561907
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  4561959 acaacttgacaactcatggatgataattcatcaacaacgaccttgactcgaca 4561907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 16997240 - 16997321
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| |||| ||||||||||||||||   ||||||| ||||||||||||||||  || |||||||||||    
T  16997240 ttcataagcacttcattaacaacacgtggatagaagacaact---caacaacctaacaactcatggatgtcaactcatcaacaac 16997321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 13592656 - 13592584
Alignment:
Q  196 acttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||||||||  |||| |||||||||||||||||||||||   |||||||||||||||||| || |||||||||||    
T  13592656 acttcattaagaacacgtggatagaagacaactcaacaac---ttaacaactcatggatgacaactcatcaacaac 13592584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 27533457 - 27533500
Alignment:
Q  242 acaactcatggatgataattcatcaacaacgactttgactcgac 285  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  27533457 acaactcatggatgataattcatcgacaacgactttgactcgac 27533500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 287
Target Start/End: Original strand, 14650373 - 14650465
Alignment:
Q  192 aagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||| || ||||||||||||||||||    |||||||| ||||| ||||||| | || | ||| |||||||||||||||||||||    
T  14650373 aagtacttcgttaacaactcatggatagaagacaact---taacaacttgacaacgcatggataaaaacttatcgacaacgactttgactcgacaa 14650465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 287
Target Start/End: Original strand, 25689349 - 25689394
Alignment:
Q  242 acaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||    
T  25689349 acaactcatagatgataattcatcaacaacgaccttgactcgacaa 25689394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 37018314 - 37018362
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||||||||||||| ||| |||| |||||||||||||||||||||||    
T  37018314 ttcataagtacttcatgaacaacacgtggatagaagacaactcaacaac 37018362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 42874589 - 42874642
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||| ||||||||||| |||| || ||||||||||||||||||| |||||||    
T  42874589 acaactcaacaactcatgaatgacaactcatcaacaacgactttgattcgacaa 42874642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 6e-37; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 24367391 - 24367493
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 284  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||  | |||||||||||| ||||||||||||||||||||||||||||||||    
T  24367391 tattcataagtacttcattaacaacacatggatagaagacagctcaacaacttcataacaactcatgaatgataattcatcaacaacgactttgactcga 24367490  T
Q  285 caa 287  Q
    |||    
T  24367491 caa 24367493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 32215531 - 32215445
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32215531 tattcataagtacttcattaacaacacatggatagaatacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 32215445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 38967029 - 38967131
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 284  Q
    ||||||||||||||| |||||| |||||||||||||| |||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||    
T  38967029 tattcataagtactttattaacaacacatggatagaaaacaactcaacaacttcataacaactcatggatgataattcatcaacaacgactttgactcga 38967128  T
Q  285 caa 287  Q
    |||    
T  38967129 caa 38967131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 24514933 - 24515029
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||||   ||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  24514933 ttcataagcacttcattaacaacacgtggatagaagacaactcaac---aacttaacaactcatggatgacaactcatcaacaacgactttgactcgaca 24515029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 187 - 287
Target Start/End: Complemental strand, 28653807 - 28653710
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||| ||||||||||| |||  |||||||||||||||||||||||   |||||||||||||||||| || ||||||||||||||||||||||||||    
T  28653807 ttcataagcacttcattaacaacatgtggatagaagacaactcaacaac---ttaacaactcatggatgacaactcatcaacaacgactttgactcgaca 28653711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 9784480 - 9784535
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9784480 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 9784535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 32215451 - 32215396
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32215451 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 32215396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 1282860 - 1282913
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1282860 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 1282913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 17306266 - 17306331
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  17306266 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 17306331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 31344609 - 31344662
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31344609 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 31344662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 41531639 - 41531586
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41531639 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 41531586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 12902150 - 12902097
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12902150 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 12902097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 30345650 - 30345597
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30345650 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 30345597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 10102287 - 10102235
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10102287 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 10102235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 24629113 - 24629061
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24629113 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 24629061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 24648827 - 24648879
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24648827 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 24648879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 27380066 - 27380014
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27380066 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 27380014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 27384112 - 27384060
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27384112 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 27384060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 27601264 - 27601316
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27601264 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 27601316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 36838983 - 36839042
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgact 281  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  36838983 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgact 36839042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 17306201 - 17306282
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| |||| ||||||||||||||||    |||||||||||||||||||||||| || |||||||||||    
T  17306201 ttcataagcacttcattaacaacacgtggatagaagacaact---gaacaacttaacaactcatggatgacaactcatcaacaac 17306282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 36838918 - 36838999
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| |||| ||||||||||||||||   |||||||||||||||||||| |||| || |||||||||||    
T  36838918 ttcataagcacttcattaacaacacgtggatagaagacaact---caacaacttaacaactcatgaatgacaactcatcaacaac 36838999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 10607 - 10693
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10607 tattcataagtacttcattaacaacacatggatagaacacaactcaacaacaacttaacaactcatggatggtaattcatcaacaac 10693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 10687 - 10738
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10687 caacaacttaacaactcatggatgataattcatcaacaacgacattgactcg 10738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 1194 - 1108
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1194 tattcataagtacttcattaacaacacatggatagaacacaactcaacaacaacttaacaactcatggatggtaattcatcaacaac 1108  T

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Target: scaffold0109; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 36623 - 36570
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36623 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 36570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 1114 - 1063
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcg 283  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1114 caacaacttaacaactcatggatgataattcatcaacaacgacattgactcg 1063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 28755 - 28852
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||| |||||| |||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28755 ttcataagtactttattaacaacacatagatagaagacaactcaac---aacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 28851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 12829 - 12754
Alignment:
Q  196 acttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12829 acttcattaacaacacatggatagaagacaactcaacaacaacttaacaactcatggatgataatacatcaacaac 12754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 12760 - 12705
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12760 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 12705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 185 - 287
Target Start/End: Complemental strand, 102404 - 102305
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 284  Q
    |||||||||| ||||||||||| |||| |||||||||||||||||||||||   |||||||||||||||||| || ||||||||||||||||||||| ||    
T  102404 tattcataagcacttcattaacaacacgtggatagaagacaactcaacaac---ttaacaactcatggatgacaactcatcaacaacgactttgacttga 102308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 10663 - 10760
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||| ||||||||||| |||| ||||||||||| ||||||||   ||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  10663 ttcataagcacttcattaacaacacgtggatagaagataactcaac---aacttaacaactcatggatgacaactcatcaacaacgactttgactcgaca 10759  T

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Target: scaffold0205 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 29205 - 29288
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||| |||||||| |||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||    
T  29205 tattcaaaagtactttattaacaacacatggatagaagacaactcaac---aacttaacaactcatggatgataattcatcaacaac 29288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 29282 - 29337
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29282 caacaacttaacaactcatggataataattcatcaacaacgactttgactcgacaa 29337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 63583 - 63503
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaa 267  Q
    |||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  63583 ttcataagcacctcattaacaacacatggatagaagacaactcaacaacaacttaacaactcatggttgacaattcatcaa 63503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 63515 - 63450
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||| ||| ||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  63515 gacaattcatcaagaacttaacaactcatggatgacaattcatcaacaacgaatttgactcgacaa 63450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 287
Target Start/End: Original strand, 116585 - 116673
Alignment:
Q  196 acttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||| |||||||| ||||||||||||||||   |||||||| |||||||||||| || |||||||||||||||||||||||||||    
T  116585 acttcattaacaacacatgggtagaagacaactcaac---aacttaacgactcatggatgacaactcatcaacaacgactttgactcgacaa 116673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 19403 - 19319
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| || |||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  19403 ttcataagcacctcattaacaacacatggataaaagacaacttaacaacaacttaacaactcatggatgacaactcatcaacaac 19319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 19335 - 19270
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  19335 gacaactcatcaacaacttaacaactcatggatgacaattcatcaacaacgattttgactcgacaa 19270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 6527 - 6472
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6527 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 6472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 6594 - 6546
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| |||||||||||||||||||    
T  6594 ttcataggtacttctttaacaacacatgggtagaagacaactcaacaac 6546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 271
Target Start/End: Complemental strand, 6558 - 6521
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  6558 acaactcaacaactcatagatgataattcatcaacaac 6521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 9322 - 9377
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9322 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 9377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 8195 - 8260
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||| ||||||||||    
T  8195 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgacttagactcgacaa 8260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 8130 - 8211
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||| ||| ||| |||||||| ||||||||||||   |||| ||||||| ||||||| |||| || |||||||||||    
T  8130 ttcataagcactccataaacaacacatgggtagaagacaact---caacgacttaacgactcatgaatgacaactcatcaacaac 8211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 36747 - 36692
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36747 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 36692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 36814 - 36766
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| |||||||||||||||||||    
T  36814 ttcataggtacttctttaacaacacatgggtagaagacaactcaacaac 36766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 271
Target Start/End: Complemental strand, 36778 - 36741
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  36778 acaactcaacaactcatagatgataattcatcaacaac 36741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 694 - 629
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  694 gacaactcatcaacaacttaacaactcatggatgagaactcatcaacaacgactttgactcgacaa 629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 750 - 678
Alignment:
Q  196 acttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||||||||| | || |||| ||||||||||||||||||   |||||||||||||||||| || |||||||||||    
T  750 acttcattaacaatacgtggagagaagacaactcaacaac---ttaacaactcatggatgacaactcatcaacaac 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 13978 - 13913
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  13978 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 13913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 14043 - 13962
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| |||||||| ||||||| |||||||   ||||||||| |||||||||||| || |||||||||||    
T  14043 ttcataagcacttcattaacaacacatgggtagaagataactcaa---caacttaacgactcatggatgacaactcatcaacaac 13962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 14746 - 14693
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14746 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 14693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 14815 - 14767
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| ||||||||||||| |||||    
T  14815 ttcataggtacttctttaacaacacatgggtagaagacaactcgacaac 14767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 52; Significance: 7e-21; HSPs: 3)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 8088 - 8037
Alignment:
Q  236 aacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8088 aacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 8037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 8141 - 8090
Alignment:
Q  216 atagaagacaactcaacaacaacttaacaactcatggatgataattcatcaa 267  Q
    ||||| ||||| ||| | ||||||||||||||||||||||||||||||||||    
T  8141 atagatgacaattcatcgacaacttaacaactcatggatgataattcatcaa 8090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 8192 - 8144
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| |||||||||||||||||||    
T  8192 ttcataggtacttctttaacaacacatgggtagaagacaactcaacaac 8144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 208249 - 208194
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  208249 caacaacttaacaactcatggatgataattcatcaacaacgactttgacttgacaa 208194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 73955 - 73900
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  73955 caacaactgaacaactcatggatgataattcatcaacaacgactttgactcgacaa 73900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 190038 - 189983
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  190038 caacaacttaacaactcatggattataattcatcaacaacgactttgactcgacaa 189983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 7e-21; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 18355687 - 18355742
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18355687 caacaacttaacaactcatggatgataattcatcaacaacgacttcgactcgacaa 18355742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 287
Target Start/End: Complemental strand, 33896214 - 33896117
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||| ||||||||||| |||||||| ||||||| ||||||||||    ||||| |||||||||||| || |||||||||||||||||||||| |||    
T  33896214 ttcataagcacttcattaacaacacatgggtagaagataactcaacaat---ttaacgactcatggatgacaactcatcaacaacgactttgactcaaca 33896118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 10752662 - 10752715
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10752662 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 10752715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 11220195 - 11220248
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11220195 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 11220248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 11228604 - 11228657
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11228604 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 11228657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 11230593 - 11230646
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11230593 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 11230646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 20295319 - 20295371
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20295319 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 20295371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 40724250 - 40724198
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40724250 acaacttaacaactcatggatgataattcatcaacaacgactttgacttgaca 40724198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 11224781 - 11224834
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  11224781 acaacttaacaaatcatggatgataattcatcaacaacgaccttgactcgacaa 11224834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 11226614 - 11226667
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  11226614 acaacttaacaactcatggatgataattcatcaacaacgatcttgactcgacaa 11226667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 22108046 - 22107993
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  22108046 acaactcaacaactcatagatgataattcatcaacaacgactttgactcgacaa 22107993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 15237468 - 15237416
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  15237468 acaacttaacaactcatggatgataattcatc-acaacgaccttgactcgacaa 15237416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 287
Target Start/End: Complemental strand, 19473344 - 19473299
Alignment:
Q  242 acaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||    
T  19473344 acaactcatagatgataattcatcaacaacgaccttgactcgacaa 19473299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 20911559 - 20911515
Alignment:
Q  243 caactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||| || ||||||||||||||||||||||||||||||||||||    
T  20911559 caactaatagatgataattcatcaacaacgactttgactcgacaa 20911515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 22108082 - 22108034
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| |||||||||||||||||||    
T  22108082 ttcataggtacttctttaacaacacatgggtagaagacaactcaacaac 22108034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 24767927 - 24767887
Alignment:
Q  242 acaactcatggatgataattcatcaacaacgactttgactc 282  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  24767927 acaactcacagatgataattcatcaacaacgactttgactc 24767887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 11224712 - 11224760
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| ||||||||||||| |||||    
T  11224712 ttcataggtacttctttaacaacacatgggtagaagacaactcgacaac 11224760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 11230524 - 11230572
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| ||||||||||||| |||||    
T  11230524 ttcataggtacttctttaacaacacatgggtagaagacaactcgacaac 11230572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 18355620 - 18355668
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaac 235  Q
    |||||| ||||||| ||||| |||||||| ||||||||||||| |||||    
T  18355620 ttcataggtacttctttaacaacacatgggtagaagacaactcgacaac 18355668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 233 - 287
Target Start/End: Complemental strand, 8225 - 8171
Alignment:
Q  233 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8225 aacaacttaacaactcatggatgataattcatcaacaatgactttgactcgacaa 8171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 233 - 287
Target Start/End: Complemental strand, 25231 - 25177
Alignment:
Q  233 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25231 aacaacttaacaactcatggatgataattcatcaacaatgactttgactcgacaa 25177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 51; Significance: 3e-20; HSPs: 6)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 20140 - 20059
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||   |||||||||||||||||||||| || |||||||||||    
T  20140 ttcataagcacttcattaacgacacgtggatagaagacaactcaa---caacttaacaactcatggatgacaactcatcaacaac 20059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 20075 - 20010
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||| |||||| |||||||||    
T  20075 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaatgactttcactcgacaa 20010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 7057 - 7100
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactca 230  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  7057 ttcataagcacttcattaacaacacatggatagaagacaactca 7100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 14176 - 14219
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactca 230  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  14176 ttcataagcacttcattaacaacacatggatagaagacaactca 14219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 7093 - 7134
Alignment:
Q  242 acaactcatggatgataattcatcaacaacgactttgactcg 283  Q
    ||||||||||||||| || |||||||||||||||||||||||    
T  7093 acaactcatggatgacaactcatcaacaacgactttgactcg 7134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 14212 - 14253
Alignment:
Q  242 acaactcatggatgataattcatcaacaacgactttgactcg 283  Q
    ||||||||||||||| || |||||||||||||||||||||||    
T  14212 acaactcatggatgacaactcatcaacaacgactttgactcg 14253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 150 - 97
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  150 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 97  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 4503 - 4450
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4503 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaa 4450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 62242 - 62189
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  62242 acaacttaacaactcatggatgataattcatcaacaacgactttgaatcgacaa 62189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 66158 - 66105
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  66158 acaacttaacaactcatggatgataattcataaacaacgactttgactcgacaa 66105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 80014 - 80066
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  80014 acaacttaacaacttatggatgataattcatcaacaacgaccttgacttgaca 80066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 5733 - 5681
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5733 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 5681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 11894 - 11946
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11894 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 11946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 33320 - 33268
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33320 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 33268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 67935 - 67883
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  67935 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 67883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 19743 - 19663
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaa 270  Q
    |||| ||| ||||||||||| |||| |||||||||||||||||||   |||||||||||||||||||||| || ||||||||||    
T  19743 ttcacaagcacttcattaacaacacgtggatagaagacaactcaa---caacttaacaactcatggatgacaactcatcaacaa 19663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 19678 - 19613
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| |||||| ||| |||||||||||||| || |||| |||||||||||| |||||||||    
T  19678 gacaactcatcaacaaattagcaactcatggatgacaactcattaacaacgactttaactcgacaa 19613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 59353 - 59301
Alignment:
Q  234 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  59353 acaacttaacaactcatggatgataattcatcaacaacgaccttgactcgaca 59301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 20836 - 20785
Alignment:
Q  236 aacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20836 aacttaacaactcatggatgataattcatcaacaacaactttgactcgacaa 20785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 11440 - 11495
Alignment:
Q  232 caacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  11440 caacaacttaacaactcatggatgataattcatcaacaatgactttgactcaacaa 11495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 47; Significance: 7e-18; HSPs: 7)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 15606 - 15544
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 284  Q
    ||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  15606 gacaattcatcaacaacttaacaactcatggatgacaattcatcaacaacgactttaactcga 15544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 15738 - 15689
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  15738 gacaattcatcaacaacttaacaactcatggatgacaattcatcaacaac 15689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 271
Target Start/End: Complemental strand, 15815 - 15755
Alignment:
Q  208 acacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||||||||||| |||||||||||||   ||||| |||| ||||||| ||||||||||||||    
T  15815 acacatggatagaatacaactcaacaac---ttaacgactcgtggatgacaattcatcaacaac 15755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 271
Target Start/End: Complemental strand, 15628 - 15590
Alignment:
Q  233 aacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  15628 aacaactaaacaactcatggatgacaattcatcaacaac 15590  T

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Target: scaffold0207; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 15705 - 15656
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||| ||| |||||||| |||||||||||||| | ||||||||||||||    
T  15705 gacaattcatcaacaactaaacaactcatggatcacaattcatcaacaac 15656  T

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Target: scaffold0207; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 15771 - 15722
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||| ||| ||||||| |||||||||| |||||| ||||||||||||||    
T  15771 gacaattcatcaacaacctaacaactcacggatgacaattcatcaacaac 15722  T

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Target: scaffold0207; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 15671 - 15623
Alignment:
Q  223 acaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||| ||| |||||||||||||||||||||| || ||||||| ||||||    
T  15671 acaattcatcaacaacttaacaactcatggacgacaattcatgaacaac 15623  T

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Target: scaffold0165 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 233 - 287
Target Start/End: Original strand, 3202 - 3256
Alignment:
Q  233 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  3202 aacaacttagcaacacatggatgataattcatcaacaacgactttgactcgacaa 3256  T

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Target: scaffold0165; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 233 - 287
Target Start/End: Original strand, 7265 - 7319
Alignment:
Q  233 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  7265 aacaacttagcaacacatggatgataattcatcaacaacgactttgactcgacaa 7319  T

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Target: scaffold0292 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 4433 - 4498
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||| || |||||||||||||    
T  4433 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaatgattttgactcgacaa 4498  T

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Target: scaffold0292; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 4400 - 4449
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||    
T  4400 gacaactcatcaacaacttaacaactcatggatgacaactcatcaacaac 4449  T

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Target: scaffold0292; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 4343 - 4384
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaact 228  Q
    |||||||| ||||||||||| |||||||| ||||||||||||    
T  4343 ttcataagcacttcattaacaacacatgggtagaagacaact 4384  T

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Target: scaffold0073 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 287
Target Start/End: Original strand, 56574 - 56666
Alignment:
Q  192 aagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||| || |||||||||||||||||| ||||||   || ||||||||||||| |||| | ||| |||||||||||||||||||||    
T  56574 aagtacttcgttaacaactcatggatagaagacaacttaacaac---ttgacaactcatggataataacttatcgacaacgactttgactcgacaa 56666  T

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Target: scaffold1633 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 47 - 109
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 284  Q
    ||||||||| ||||||||||||||||||||||||| || |||| ||||||||| |||||||||    
T  47 gacaactcatcaacaacttaacaactcatggatgacaactcatgaacaacgacattgactcga 109  T

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Target: scaffold1633; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 18 - 63
Alignment:
Q  226 actcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||| |||||||||||| |||||||||||| || |||||||||||    
T  18 actcatcaacaacttaaccactcatggatgacaactcatcaacaac 63  T

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Target: scaffold0484 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 287
Target Start/End: Original strand, 331 - 385
Alignment:
Q  233 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||    
T  331 aacaacttgacaactcatggatgataattcatcaacaacgacattgacttgacaa 385  T

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Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 287
Target Start/End: Original strand, 70804 - 70854
Alignment:
Q  237 acttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  70804 acttaacaactcatagatgataattcatcaacaacgacttagactcgacaa 70854  T

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Target: scaffold0058 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 993 - 925
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatga 256  Q
    |||||||||| ||||||||||| |||| ||||||||||||||   | |||||||||||||||||||||||||    
T  993 tattcataagcacttcattaacaacacgtggatagaagacaa---atcaacaacttaacaactcatggatga 925  T

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Target: scaffold0058; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 283
Target Start/End: Complemental strand, 879 - 832
Alignment:
Q  236 aacttaacaactcatggatgataattcatcaacaacgactttgactcg 283  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  879 aacttaacaactcatggatgacaattcatcaacaaagactttgactcg 832  T

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Target: scaffold0278 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 284
Target Start/End: Original strand, 7277 - 7317
Alignment:
Q  244 aactcatggatgataattcatcaacaacgactttgactcga 284  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7277 aactcatggatgataattcatcaacaacgactttgactcga 7317  T

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Target: scaffold0278; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 7160 - 7241
Alignment:
Q  187 ttcataagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    |||||| ||||||| ||||| ||||| || ||| ||||||||||||   ||||||||||||||| ||||| ||||||||||||||    
T  7160 ttcataggtacttctttaacaacacaggggtagcagacaactcaac---aacttaacaactcatagatgacaattcatcaacaac 7241  T

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Target: scaffold0278; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 7219 - 7274
Alignment:
Q  216 atagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaac 271  Q
    ||||| ||||| ||| ||||||||| ||||||||||||||| ||||||||||||||    
T  7219 atagatgacaattcatcaacaacttgacaactcatggatgacaattcatcaacaac 7274  T

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Target: scaffold0359 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 284
Target Start/End: Original strand, 15118 - 15207
Alignment:
Q  192 aagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 284  Q
    ||||||||| ||||| || ||||||||||||||||||    |||||||| ||||||||||||| | || | ||| ||||||||||||||||||    
T  15118 aagtacttcgttaacaactcatggatagaagacaact---taacaacttgacaactcatggataacaacttatcgacaacgactttgactcga 15207  T

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Target: scaffold0750 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 3649 - 3690
Alignment:
Q  185 tattcataagtacttcattaactacacatggatagaagacaa 226  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  3649 tattcataagtacttcattaacaacacatggatagaagacaa 3690  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 287
Target Start/End: Complemental strand, 166919 - 166827
Alignment:
Q  192 aagtacttcattaactacacatggatagaagacaactcaacaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    ||||||||| ||||| || ||||||||||||||||||    |||||||| ||||| ||||||| | || | ||| |||||||||||||||||||||    
T  166919 aagtacttcgttaacaactcatggatagaagacaact---taacaacttgacaacgcatggataaaaacttatcgacaacgactttgactcgacaa 166827  T

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Target: scaffold0299 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 6426 - 6466
Alignment:
Q  247 tcatggatgataattcatcaacaacgactttgactcgacaa 287  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  6426 tcatagatgataattcatcaacaacgactttgactcgacaa 6466  T

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Target: scaffold0166 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 10424 - 10384
Alignment:
Q  242 acaactcatggatgataattcatcaacaacgactttgactc 282  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  10424 acaactcacagatgataattcatcaacaacgactttgactc 10384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 256
Target Start/End: Original strand, 20953 - 20987
Alignment:
Q  222 gacaactcaacaacaacttaacaactcatggatga 256  Q
    ||||||||| |||||||||||||||||||||||||    
T  20953 gacaactcatcaacaacttaacaactcatggatga 20987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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