View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9390_low_19 (Length: 202)
Name: NF9390_low_19
Description: NF9390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9390_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 33 - 189
Target Start/End: Original strand, 2454057 - 2454213
Alignment:
| Q |
33 |
ggaaaaagtgccagtaaccaccaaaaacctgcaaactcctccaactaccacctcaccaccgcaaactccaatccctcttgtccaaagaatctatgacttg |
132 |
Q |
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| T |
2454057 |
ggaaaaagcgccaataaccaccaaaaacccgcaaactcctccaactaccacctcaccaccacaaactccaatccctctcgtccaaagaatctatgacttg |
2454156 |
T |
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| Q |
133 |
gtgatatcacctgacctaaacaagagagaaacaaatcaaatccaccaacttctgatg |
189 |
Q |
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|||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||| |
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| T |
2454157 |
gtgatatcacctaacctaaataagagagaaacaaatcaaatccaccaacgtctgatg |
2454213 |
T |
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