View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9390_low_7 (Length: 338)

Name: NF9390_low_7
Description: NF9390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9390_low_7
NF9390_low_7
[»] scaffold0029 (1 HSPs)
scaffold0029 (6-325)||(134449-134768)
[»] scaffold0002 (2 HSPs)
scaffold0002 (6-325)||(312276-312595)
scaffold0002 (6-325)||(327730-328049)
[»] chr4 (13 HSPs)
chr4 (35-325)||(8654697-8654987)
chr4 (6-325)||(3129577-3129893)
chr4 (69-325)||(47541151-47541406)
chr4 (138-325)||(7662966-7663153)
chr4 (120-325)||(2631624-2631829)
chr4 (119-325)||(20675248-20675454)
chr4 (175-325)||(23873240-23873390)
chr4 (175-325)||(55298846-55298996)
chr4 (129-325)||(8486699-8486895)
chr4 (6-54)||(7662904-7662952)
chr4 (257-325)||(49926112-49926180)
chr4 (257-325)||(19647935-19648003)
chr4 (257-325)||(29553586-29553654)
[»] chr5 (5 HSPs)
chr5 (6-325)||(10486515-10486834)
chr5 (96-325)||(34481173-34481402)
chr5 (208-325)||(587742-587859)
chr5 (102-325)||(35122397-35122620)
chr5 (278-314)||(27795720-27795756)
[»] chr1 (9 HSPs)
chr1 (31-325)||(21528387-21528685)
chr1 (14-323)||(36306012-36306321)
chr1 (102-325)||(37530792-37531015)
chr1 (175-325)||(32353061-32353211)
chr1 (119-325)||(48073139-48073345)
chr1 (241-325)||(48265548-48265632)
chr1 (250-325)||(30970447-30970522)
chr1 (251-325)||(16873332-16873406)
chr1 (257-325)||(25504839-25504907)
[»] chr3 (12 HSPs)
chr3 (38-325)||(49731559-49731846)
chr3 (9-325)||(30166942-30167258)
chr3 (119-325)||(2813208-2813414)
chr3 (119-325)||(29309634-29309840)
chr3 (119-325)||(6176186-6176392)
chr3 (201-325)||(9379323-9379447)
chr3 (250-325)||(23601999-23602074)
chr3 (258-325)||(25872955-25873022)
chr3 (250-307)||(8943596-8943653)
chr3 (251-325)||(14867625-14867699)
chr3 (279-317)||(46248738-46248776)
chr3 (278-316)||(48569906-48569944)
[»] chr7 (12 HSPs)
chr7 (9-325)||(15653303-15653619)
chr7 (9-278)||(46623966-46624235)
chr7 (119-325)||(13440279-13440485)
chr7 (92-325)||(12378409-12378639)
chr7 (250-325)||(45943077-45943152)
chr7 (193-316)||(43105546-43105669)
chr7 (102-181)||(17856106-17856185)
chr7 (251-326)||(41339750-41339825)
chr7 (251-325)||(19728713-19728787)
chr7 (279-317)||(27723973-27724011)
chr7 (292-325)||(46623931-46623964)
chr7 (257-325)||(45992802-45992870)
[»] chr8 (5 HSPs)
chr8 (6-325)||(7452578-7452897)
chr8 (120-325)||(16420719-16420924)
chr8 (273-325)||(19384572-19384624)
chr8 (251-316)||(12134563-12134628)
chr8 (278-314)||(13879354-13879390)
[»] chr2 (14 HSPs)
chr2 (9-325)||(45421745-45422062)
chr2 (4-325)||(13550350-13550671)
chr2 (119-321)||(26894320-26894522)
chr2 (119-321)||(26899759-26899961)
chr2 (175-325)||(43627725-43627875)
chr2 (226-325)||(31085452-31085551)
chr2 (226-325)||(33548098-33548197)
chr2 (4-246)||(13550882-13551124)
chr2 (267-325)||(22052853-22052911)
chr2 (267-326)||(36804137-36804196)
chr2 (278-326)||(36804352-36804400)
chr2 (102-185)||(22725129-22725212)
chr2 (120-161)||(26679225-26679266)
chr2 (278-314)||(40176905-40176941)
[»] scaffold0131 (1 HSPs)
scaffold0131 (6-199)||(4144-4337)
[»] chr6 (9 HSPs)
chr6 (4-325)||(26205574-26205895)
chr6 (4-325)||(25318080-25318401)
chr6 (119-325)||(23347175-23347381)
chr6 (175-325)||(15674051-15674205)
chr6 (270-325)||(33630323-33630378)
chr6 (292-325)||(1683266-1683299)
chr6 (251-314)||(4474935-4474998)
chr6 (257-325)||(19255866-19255934)
chr6 (257-325)||(33640144-33640212)
[»] scaffold0418 (2 HSPs)
scaffold0418 (138-325)||(7901-8088)
scaffold0418 (6-54)||(8102-8149)
[»] scaffold0112 (1 HSPs)
scaffold0112 (251-325)||(15490-15564)


Alignment Details
Target: scaffold0029 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 6 - 325
Target Start/End: Original strand, 134449 - 134768
Alignment:
Q  6 gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggagatg 105  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||| | |||||||||||| ||||||||||||||    
T  134449 gtttcatgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggttggtttggtgatcttgtggctaggagggttggagatg 134548  T
Q  106 gagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc 205  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  134549 gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc 134648  T
Q  206 tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt 305  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  134649 tgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt 134748  T
Q  306 agggctttacttcttgatgt 325  Q
    ||||||||||||||||||||    
T  134749 agggctttacttcttgatgt 134768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 284; Significance: 1e-159; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 6 - 325
Target Start/End: Original strand, 312276 - 312595
Alignment:
Q  6 gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggagatg 105  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||| | |||||||||||| ||||||||||||||    
T  312276 gtttcatgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggttggtttggtgatcttgtggctaggagggttggagatg 312375  T
Q  106 gagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc 205  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  312376 gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc 312475  T
Q  206 tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt 305  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  312476 tgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt 312575  T
Q  306 agggctttacttcttgatgt 325  Q
    ||||||||||||||||||||    
T  312576 agggctttacttcttgatgt 312595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 6 - 325
Target Start/End: Original strand, 327730 - 328049
Alignment:
Q  6 gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggagatg 105  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||| | |||||||||||| ||||||||||||||    
T  327730 gtttcatgttggtggagggaggtgagtcgtcttaggggtagtgatggtgctggagagaggggttggtttggtgatcttgtggctaggagggttggagatg 327829  T
Q  106 gagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc 205  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  327830 gagctaatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc 327929  T
Q  206 tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt 305  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  327930 tgtggcagacttgttatctattgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt 328029  T
Q  306 agggctttacttcttgatgt 325  Q
    ||||||||||||||||||||    
T  328030 agggctttacttcttgatgt 328049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 275; Significance: 1e-154; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 35 - 325
Target Start/End: Original strand, 8654697 - 8654987
Alignment:
Q  35 tcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggagatggagctgatacgttgttttggttggatagg 134  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  8654697 tcttaggggtagtgttggtgctggagagagtggatggtttggtgatcttgtggctaggagggttggagatggagctaatacgttgttttggttggatagg 8654796  T
Q  135 tggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcgg 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8654797 tggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcgg 8654896  T
Q  235 agcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8654897 agcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 8654987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 6 - 325
Target Start/End: Original strand, 3129577 - 3129893
Alignment:
Q  6 gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggagatg 105  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||| | || ||||||||| ||| |||||||| ||||||||||||||    
T  3129577 gtttcgtgttggtggagggaggtgagtcgttttaggggtagtgatggtgatggagagggcggctggtttgttgatcatgtggctaggagggttggagatg 3129676  T
Q  106 gagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc 205  Q
    |||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||||    
T  3129677 gagctgatacattgttttggtttggtaggtggttaggggatgttcctttttgtgtccgttttagtagactgtttgagttaacagagaataagttcatgtc 3129776  T
Q  206 tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt 305  Q
    ||||||||||||||| ||| ||||||||||||||   ||||||  |||||||||||||||| | ||||||||||||||||||    ||||||||||||||    
T  3129777 tgtggcagacttgttctctattgattcggagcagctaggggttacgtggaggtggagacgttgtttgtggcagtgggaggag---atgttagcggagtgt 3129873  T
Q  306 agggctttacttcttgatgt 325  Q
    ||||||||||||||||||||    
T  3129874 agggctttacttcttgatgt 3129893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 69 - 325
Target Start/End: Complemental strand, 47541406 - 47541151
Alignment:
Q  69 tggtttgttaatcttgtggctatgagggttggagatggagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttcc 168  Q
    ||||||||| ||| |||||||| || |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||      
T  47541406 tggtttgttgatcatgtggcta-gaaggttggagatggagatgatacgttgttttggtttgataggtggttaggggatgttcctttttgtgttcgttttt 47541308  T
Q  169 gtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtag 268  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||  ||| ||| ||||||||||||||||| |    
T  47541307 gtagactgtttgagttaacagagaataagttcatgtctgtggcagacttgttttctgttgattcggagcagccgggagttatgtggaggtggagacgtcg 47541208  T
Q  269 gttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
     |||||||||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  47541207 tttgtggcagtggaaggaggagatgttagcggagtgtagggctttacttcttgatgt 47541151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 138 - 325
Target Start/End: Original strand, 7662966 - 7663153
Alignment:
Q  138 ttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagc 237  Q
    |||||||||||||| || ||||||||||| |||||  |||||||||||| |||||||||| | |||||| ||||||||||||| |||||||||| |||||    
T  7662966 ttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaatagagaataagctcatgtctatggcagacttgttctctgttgatttggagc 7663065  T
Q  238 agtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    ||  |||| |||| ||||||||||| ||||| ||||||||||||||||||||  |||||| |||||||| ||||||||||||||||||    
T  7663066 agcaggggtttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttagtggagtgtatggctttacttcttgatgt 7663153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 120 - 325
Target Start/End: Complemental strand, 2631829 - 2631624
Alignment:
Q  120 ttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgt 219  Q
    |||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||||||||| ||||||     
T  2631829 ttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtggccgacttgc 2631730  T
Q  220 tatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttct 319  Q
    | |||||||||||||||| ||||||||   |||||||||||||||||||||| ||||||||||||||||| ||| |||  ||||||||||||||||||||    
T  2631729 tctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttct 2631630  T
Q  320 tgatgt 325  Q
    ||||||    
T  2631629 tgatgt 2631624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 119 - 325
Target Start/End: Complemental strand, 20675454 - 20675248
Alignment:
Q  119 gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 218  Q
    ||||||||  ||||||||||||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| ||| || ||||| ||||||    
T  20675454 gttttggtctgataggtggttaggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatatccgtggccgacttg 20675355  T
Q  219 ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 318  Q
     | | |||||||||||||| ||||||||   |||||||||||||||||||||| ||||||||||||||||| ||| | |  ||||||||| |||||||||    
T  20675354 ctctttgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgcttgatgagtgtaggactttacttc 20675255  T
Q  319 ttgatgt 325  Q
    |||||||    
T  20675254 ttgatgt 20675248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 175 - 325
Target Start/End: Original strand, 23873240 - 23873390
Alignment:
Q  175 tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtg 274  Q
    |||||||||||||||||||||||| |||||| || || |||||| | |||||||||||||||| ||||||||   |||||||||||||||||||||  ||    
T  23873240 tgtttgagttaacagagaataagtctatgtccgttgccgacttgctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggtaatg 23873339  T
Q  275 gcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    ||||||||||||||| ||| |||  ||||||||||||||||||||||||||    
T  23873340 gcagtgggaggaggagttgctagatgagtgtagggctttacttcttgatgt 23873390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 175 - 325
Target Start/End: Complemental strand, 55298996 - 55298846
Alignment:
Q  175 tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtg 274  Q
    |||||||||||||||||||||||| |||||| || || |||||| | |||||||||||||||| ||||||||   ||||||||||||||||||| || ||    
T  55298996 tgtttgagttaacagagaataagtctatgtccgttgccgacttgctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtagtttatg 55298897  T
Q  275 gcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    ||||||||||||||| ||| |||  ||||||||||||||||||||||||||    
T  55298896 gcagtgggaggaggagttgctagatgagtgtagggctttacttcttgatgt 55298846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 129 - 325
Target Start/End: Original strand, 8486699 - 8486895
Alignment:
Q  129 gataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttg 228  Q
    ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||| || |  |||||| | |||||||    
T  8486699 gataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtcgtcgacttgctctctgttg 8486798  T
Q  229 attcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    ||||||| | ||||||||   |||||||||||||||||||||| |||||||||||| |||| ||| |||   |||||||||||||||||||||||||    
T  8486799 attcggaccggtggggggaggtgtggaggtggagacgtaggttatggcagtgggagaaggagttgctagattagtgtagggctttacttcttgatgt 8486895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 7662904 - 7662952
Alignment:
Q  6 gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtg 54  Q
    ||||||||||||||| |||||||||||||| |||||| ||||| |||||    
T  7662904 gtttcgtgttggtggggggaggtgagtcgtattagggatagtggtggtg 7662952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 325
Target Start/End: Original strand, 49926112 - 49926180
Alignment:
Q  257 gtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||| || || ||||||  |||||||||||| ||||||| ||||||||||||||| || ||||||||    
T  49926112 gtggaggcggagattgtgggcgtgggaggaggagttgttagtggagtgtagggcttttctgcttgatgt 49926180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 19648003 - 19647935
Alignment:
Q  257 gtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||| || || ||||||  ||||||||||||  |||||| ||||||||||||||| || ||||||||    
T  19648003 gtggaggcggagattgtgggcgtgggaggaggagatgttagtggagtgtagggcttttctgcttgatgt 19647935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 325
Target Start/End: Original strand, 29553586 - 29553654
Alignment:
Q  257 gtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||| || || ||||||  |||||||||||| ||||||| |||||||||| |||||||  |||||||    
T  29553586 gtggaggcggagattgtgggcgtgggaggaggagttgttagaggagtgtaggactttactgtttgatgt 29553654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 6 - 325
Target Start/End: Original strand, 10486515 - 10486834
Alignment:
Q  6 gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggagatg 105  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |  | ||||||||| ||| |||||||| ||||||||||||||    
T  10486515 gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgatggtgatggagagtgcagctggtttgttgatcatgtggctaggagggttggagatg 10486614  T
Q  106 gagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc 205  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||    
T  10486615 gagctgatacgttgttttggttggataggtggttaggggatcttcctttttgtgtccgttttcgtaggctgtttgagttaacatagaataagttcatgtc 10486714  T
Q  206 tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt 305  Q
    ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10486715 tgtggcagacttgttctctgttgattcggagcagcggggggttatgtggaggtggagacgtaggttgtggcagtgggaggaggacatgttagcggagtgt 10486814  T
Q  306 agggctttacttcttgatgt 325  Q
    ||||||||||||||||||||    
T  10486815 agggctttacttcttgatgt 10486834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 96 - 325
Target Start/End: Complemental strand, 34481402 - 34481173
Alignment:
Q  96 gttggagatggagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaata 195  Q
    ||||| ||||| |||||||| | ||||||||  ||||||||||||||||| |||||| |||||||  | ||  || || |||||||||||||||||||||    
T  34481402 gttggtgatggggctgatacttcgttttggtccgataggtggttaggggaggttcctctttgtgtgaggtttagtcggttgtttgagttaacagagaata 34481303  T
Q  196 agtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgtt 295  Q
    ||| ||||||||||||| | ||| | |||||||||||||||| ||||||||   |||||||||||||||||||||| ||||||||||||||||  ||| |    
T  34481302 agtctatgtctgtggcatatttgctctctgttgattcggagcggtggggggaagtgtggaggtggagacgtaggttatggcagtgggaggaggggttgct 34481203  T
Q  296 agcggagtgtagggctttacttcttgatgt 325  Q
    || |||||||||||||||||||||||||||    
T  34481202 agaggagtgtagggctttacttcttgatgt 34481173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 325
Target Start/End: Complemental strand, 587859 - 587742
Alignment:
Q  208 tggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtag 307  Q
    ||||| ||||||| |||||   ||||||||| ||||||| | | ||||||||||| |||||| | |||  ||||||||||||  |||||| |||||||||    
T  587859 tggcaaacttgttctctgtgagttcggagcattggggggatgtctggaggtggaggcgtaggctatggatgtgggaggaggatatgttagaggagtgtag 587760  T
Q  308 ggctttacttcttgatgt 325  Q
    ||||||||||||||||||    
T  587759 ggctttacttcttgatgt 587742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 325
Target Start/End: Original strand, 35122397 - 35122620
Alignment:
Q  102 gatggagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagttta 201  Q
    ||||| |||||||||||||||||||   |||||||||| |  |||||||||||| |||  || || |||||| ||||||| ||| | ||||| ||    |    
T  35122397 gatggtgctgatacgttgttttggtctcataggtggtttgatgatgttccttttagtgagcggtttcgtaggttgtttgacttagctgagaacaaaacca 35122496  T
Q  202 tgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcgga 301  Q
    | ||||||||  |  |||| ||| ||||   ||||||| | ||||||  |||||||||||||||||||||||||   |||||||||   || |||| |||    
T  35122497 tttctgtggcgaatatgttctctcttgacctggagcagggaggggttgggtggaggtggagacgtaggttgtgggcttgggaggagactttattagagga 35122596  T
Q  302 gtgtagggctttacttcttgatgt 325  Q
    |  |||||||||||| ||||||||    
T  35122597 gcttagggctttactgcttgatgt 35122620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 27795756 - 27795720
Alignment:
Q  278 gtgggaggaggacttgttagcggagtgtagggcttta 314  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  27795756 gtgggaggaggacttggtagaggagtgtagggcttta 27795720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 206; Significance: 1e-112; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 31 - 325
Target Start/End: Complemental strand, 21528685 - 21528387
Alignment:
Q  31 gtcgtcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggagatggagctgatacgttgttttggttgga 130  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  21528685 gtcgtcttaggggtagtgatggtgatggagagagcggatggtttgttgatcatgtggctaggagggttggagatgaagctgatacgttgttttggttgga 21528586  T
Q  131 taggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgat 230  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| | ||||||||| |||||||||    
T  21528585 taggtggttaggggatgttcctttttgtgtccgttttcgtaggctgtttgagttaacagagaataagttcatgtctgttggagacttgttctctgttgat 21528486  T
Q  231 tcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggag----tgtagggctttacttcttgatgt 325  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||| |     ||||||||||||||||||||||    
T  21528485 tcggagcaatggggggttatgtggaggtggagacgtaggttatggtagtgggaggaggacatgttagcggtggagacgtagggctttacttcttgatgt 21528387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 14 - 323
Target Start/End: Complemental strand, 36306321 - 36306012
Alignment:
Q  14 ttggtggagggaggtgagtcgtcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggagatggagctgat 113  Q
    ||||||||||||||||||||||||||| | ||||||| |||  || ||  |||| ||||||||    |  ||||||| |||||||||||||||  |||||    
T  36306321 ttggtggagggaggtgagtcgtcttagtgatagtgttagtgagggtgattgtgggtggtttgtcggccacgtggctaggagggttggagatggttctgat 36306222  T
Q  114 acgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcag 213  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||||| ||| ||||| |||||||||||||| ||||||||| | |||| ||||||||    
T  36306221 acgttgttttggtatgataggtggttaggggatgttcctttctgtgtcctttttcgtagactgtttgagttaacggagaataagctcatgtatgtggcag 36306122  T
Q  214 acttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggcttt 313  Q
    ||||||| |||||||||| |||||||  ||||||| | ||||||||||| ||||| |||||||||||| |||||||  |||||| |||||||||||||||    
T  36306121 acttgttctctgttgatttggagcagcagggggttgtttggaggtggaggcgtagattgtggcagtggaaggaggagatgttagaggagtgtagggcttt 36306022  T
Q  314 acttcttgat 323  Q
    ||||||||||    
T  36306021 acttcttgat 36306012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 102 - 325
Target Start/End: Complemental strand, 37531015 - 37530792
Alignment:
Q  102 gatggagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagttta 201  Q
    ||||| |||||||| | ||||||||  ||||||||||||||||| |||||| |||||||  |  |  || || |||||||||||||||||||||||  ||    
T  37531015 gatggggctgatacttcgttttggtctgataggtggttaggggaggttcctctttgtgtgagacttagtcggttgtttgagttaacagagaataagacta 37530916  T
Q  202 tgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcgga 301  Q
    ||| ||||||||||||| | |||||||||||||||| ||||||||   |||||||||||||||||||||| ||||||||||||||||  ||| ||| |||    
T  37530915 tgtatgtggcagacttgctctctgttgattcggagcggtggggggaagtgtggaggtggagacgtaggttatggcagtgggaggaggggttgctagagga 37530816  T
Q  302 gtgtagggctttacttcttgatgt 325  Q
    ||||||||||||||||||||||||    
T  37530815 gtgtagggctttacttcttgatgt 37530792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 175 - 325
Target Start/End: Original strand, 32353061 - 32353211
Alignment:
Q  175 tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtg 274  Q
    |||||||||||||||||||||||| |||||| ||||| |||||| | |||||||||||||||| ||||||||   |||||||||||||||||||||| ||    
T  32353061 tgtttgagttaacagagaataagtctatgtccgtggccgacttgctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatg 32353160  T
Q  275 gcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    ||||||| ||||||| ||| |||  ||||||||||||||||||||||||||    
T  32353161 gcagtggaaggaggagttgctagatgagtgtagggctttacttcttgatgt 32353211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 119 - 325
Target Start/End: Original strand, 48073139 - 48073345
Alignment:
Q  119 gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 218  Q
    ||||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||| || || ||||||    
T  48073139 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg 48073238  T
Q  219 ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 318  Q
     | |||||||||||||||| ||||||||   |||||||||||||||||||||| ||| ||||||||||||| ||| |||  |||||| ||||||||||||    
T  48073239 ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatgggagtgggaggaggagttgctagatgagtgtggggctttacttc 48073338  T
Q  319 ttgatgt 325  Q
    |||||||    
T  48073339 ttgatgt 48073345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 241 - 325
Target Start/End: Original strand, 48265548 - 48265632
Alignment:
Q  241 ggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  48265548 ggggggttatgtggaggtggagacgtaggttgtggcagtgggaggaggagttgttagcggagtgtagggctttacttcttgatgt 48265632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 325
Target Start/End: Original strand, 30970447 - 30970522
Alignment:
Q  250 tgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    ||||||||||||| ||||| ||||||  ||||||||||||  || | |||||||||||||| ||||||||||||||    
T  30970447 tgtggaggtggaggcgtagattgtgggcgtgggaggaggagatggtggcggagtgtagggccttacttcttgatgt 30970522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 325
Target Start/End: Original strand, 16873332 - 16873406
Alignment:
Q  251 gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||||||||||||||||||||||   |||||||||   || |||| ||||  |||||||||||| ||||||||    
T  16873332 gtggaggtggagacgtaggttgtgggcttgggaggagattttattagaggagcttagggctttactgcttgatgt 16873406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 325
Target Start/End: Original strand, 25504839 - 25504907
Alignment:
Q  257 gtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||| || || ||||||  ||||||||||||  |||||| ||||||||||||||| || ||||||||    
T  25504839 gtggaggcggagattgtgggcgtgggaggaggagatgttagtggagtgtagggcttttctgcttgatgt 25504907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 38 - 325
Target Start/End: Original strand, 49731559 - 49731846
Alignment:
Q  38 taggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggagatggagctgatacgttgttttggttggataggtgg 137  Q
    ||||||||||| ||||| ||||||| | || ||||||||| ||| |||||||| ||||||||||||||||||||| || ||||||||||| |||||||||    
T  49731559 taggggtagtgatggtgatggagagtgcggctggtttgttgatcatgtggctaggagggttggagatggagctgacacattgttttggtttgataggtgg 49731658  T
Q  138 ttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagc 237  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||| ||||||    
T  49731659 ttaggggatgttcctttttgtgtccgttttcgtagactgtttgagttaacagagaataagttcatgtatgtggcagacttgttctctgttgatccggagc 49731758  T
Q  238 agtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    || |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  49731759 agcggggggttatgtggaggtggagacgtagtttgtggcagtgggaggaggagttgttggcggagtgtagggctttacttcttgatgt 49731846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 9 - 325
Target Start/End: Original strand, 30166942 - 30167258
Alignment:
Q  9 tcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggagatggag 108  Q
    ||||||||||||||||||||||||||| |||||| ||||| |||||  || ||  |||| ||||||| |  ||  ||||||| ||||||||| |||||      
T  30166942 tcgtgttggtggagggaggtgagtcgtattagggatagtgctggtgagggtgactgtgggtggtttggtggtcacgtggctaggagggttggtgatggtt 30167041  T
Q  109 ctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgt 208  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||  ||||||||||||||||||||||| | |||| |||    
T  30167042 ctgatacgttgttttggttggataggtggttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaacagagaataagctcatgtttgt 30167141  T
Q  209 ggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagg 308  Q
    |||||||||||| |||||||||  |||||||  ||| ||||| ||||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||    
T  30167142 ggcagacttgttctctgttgatctggagcagcagggtgttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttagcggagtgtagg 30167241  T
Q  309 gctttacttcttgatgt 325  Q
     ||||||||||||||||    
T  30167242 actttacttcttgatgt 30167258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 119 - 325
Target Start/End: Original strand, 2813208 - 2813414
Alignment:
Q  119 gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 218  Q
    ||||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||| || || ||||||    
T  2813208 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg 2813307  T
Q  219 ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 318  Q
     | |||||||||||||||| ||||||||   |||||||||||||||||||||| ||||||||||||||||| ||| |||  |||||||||||||||||||    
T  2813308 ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc 2813407  T
Q  319 ttgatgt 325  Q
    |||||||    
T  2813408 ttgatgt 2813414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 119 - 325
Target Start/End: Complemental strand, 29309840 - 29309634
Alignment:
Q  119 gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 218  Q
    ||||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||| ||||| ||||||    
T  29309840 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtggccgacttg 29309741  T
Q  219 ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 318  Q
     | ||||| |||||||||| ||||||||   |||||||||||||||||||||| ||||||||||||||||| ||| |||  ||||||||||| |||||||    
T  29309740 ctctctgtcgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggcgttacttc 29309641  T
Q  319 ttgatgt 325  Q
    |||||||    
T  29309640 ttgatgt 29309634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 119 - 325
Target Start/End: Original strand, 6176186 - 6176392
Alignment:
Q  119 gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 218  Q
    ||||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||| ||||||||||| |||||| || || ||||||    
T  6176186 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttagacggttgtttgagttaatagagaataagtctatgtccgtcgccgacttg 6176285  T
Q  219 ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 318  Q
     | |||||||||||||||| ||||||||   |||||||||||||||||||||| | ||||||||||||||| ||| |||  |||||||||||||||||||    
T  6176286 ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatagcagtgggaggaggagttgctagatgagtgtagggctttacttc 6176385  T
Q  319 ttgatgt 325  Q
    |||||||    
T  6176386 ttgatgt 6176392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 201 - 325
Target Start/End: Complemental strand, 9379447 - 9379323
Alignment:
Q  201 atgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcgg 300  Q
    |||| ||||||| ||||||| | ||||||||| ||||||||||||| ||||||||||||||| || ||||| ||||||||||||||||   |||||||||    
T  9379447 atgtatgtggcaaacttgttctatgttgattcagagcagtggggggatttgtggaggtggaggcgcaggttatggcagtgggaggaggggatgttagcgg 9379348  T
Q  301 agtgtagggctttacttcttgatgt 325  Q
    |||||||||| ||||| ||||||||    
T  9379347 agtgtagggcattactacttgatgt 9379323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 23602074 - 23601999
Alignment:
Q  250 tgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    ||||||||||||||| |||||| ||||||||||||||||| ||| |||  ||||||||||||||||||||||||||    
T  23602074 tgtggaggtggagacataggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttcttgatgt 23601999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 325
Target Start/End: Original strand, 25872955 - 25873022
Alignment:
Q  258 tggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||||||||||| ||||||||||||||||  ||| ||| ||||||||||||||||||| |||||||    
T  25872955 tggagacgtaggttatggcagtgggaggaggggttgctagaggagtgtagggctttactttttgatgt 25873022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 8943653 - 8943596
Alignment:
Q  250 tgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtag 307  Q
    |||||| |||||||||||||||||||  ||||||||| || |||| ||||||||||||    
T  8943653 tgtggaagtggagacgtaggttgtgggcgtgggaggaagatttgtaagcggagtgtag 8943596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 325
Target Start/End: Original strand, 14867625 - 14867699
Alignment:
Q  251 gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||| |||||||| |||||||||  |||||||||||  || |||| |||||||||||| ||| | ||||||||    
T  14867625 gtggagttggagacggaggttgtgggcgtgggaggaggttttattagaggagtgtagggccttaatacttgatgt 14867699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 317
Target Start/End: Original strand, 46248738 - 46248776
Alignment:
Q  279 tgggaggaggacttgttagcggagtgtagggctttactt 317  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  46248738 tgggaggaagacttgttaggggagtgtagggctttactt 46248776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 48569906 - 48569944
Alignment:
Q  278 gtgggaggaggacttgttagcggagtgtagggctttact 316  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  48569906 gtgggaggaggacttggtagaggagtgtagggctttact 48569944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 9 - 325
Target Start/End: Original strand, 15653303 - 15653619
Alignment:
Q  9 tcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggagatggag 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||  || ||  |||| |||||||||   |  ||||||| ||||||||||||||||     
T  15653303 tcgtgttggtggagggaggtgagtcgtcttagggatagtgttggtgagggtgattgtgggtggtttgttggccacgtggctaggagggttggagatggat 15653402  T
Q  109 ctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgt 208  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||| | |||||| |    
T  15653403 ctgatacgttgttttggtttgataggtggttaggggatgttcctttttgtgcccgttttcgtagactgtttgagttaacggagaataagctcatgtctat 15653502  T
Q  209 ggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagg 308  Q
    |||||||||||| |||||||||| |||||||  ||||||||| ||||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||    
T  15653503 ggcagacttgttctctgttgatttggagcagcagggggttttctggaggtggaggcgtagattgtggcagtgggaggaggagatgttagcggagtgtagg 15653602  T
Q  309 gctttacttcttgatgt 325  Q
    |||||||||||||||||    
T  15653603 gctttacttcttgatgt 15653619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 9 - 278
Target Start/End: Complemental strand, 46624235 - 46623966
Alignment:
Q  9 tcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggagatggag 108  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |  || ||  |||| |||||||||  ||  ||||||| ||||||| |||||||      
T  46624235 tcgtgttggtggagggaggtgagtcgtattagggatagtgttggcgagggtgactgtgggtggtttgttggtcacgtggctaggagggttagagatggtt 46624136  T
Q  109 ctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgt 208  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || || |||||||||||||| ||||||||| | ||||||||    
T  46624135 ctgatacgttgttttggtttgataggtggttaggggatgttcctttctgtgtccgttttcgcagactgtttgagttaacggagaataagctcatgtctgt 46624036  T
Q  209 ggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcag 278  Q
    |||||||||||| |||||||||| |||||||  |||  |||| ||||||||||| ||||| |||||||||    
T  46624035 ggcagacttgttctctgttgatttggagcagcagggatttttttggaggtggaggcgtagtttgtggcag 46623966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 119 - 325
Target Start/End: Complemental strand, 13440485 - 13440279
Alignment:
Q  119 gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 218  Q
    ||||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||| || || ||||||    
T  13440485 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgttgccgacttg 13440386  T
Q  219 ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 318  Q
     | |||||||||||||||| ||||||||   ||||||||||||||||||| || ||| ||||||||||||| ||| |||  |||||| ||||||||||||    
T  13440385 ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtagtttatggtagtgggaggaggagttgctagatgagtgttgggctttacttc 13440286  T
Q  319 ttgatgt 325  Q
    |||||||    
T  13440285 ttgatgt 13440279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 92 - 325
Target Start/End: Original strand, 12378409 - 12378639
Alignment:
Q  92 gagggttggagatggagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagag 191  Q
    ||||||||| ||||  ||||||||   ||||||||  ||||||||| |||||||||||||| | ||||  || |  | ||| |||||||||||||  |||    
T  12378409 gagggttggtgatgaggctgatacaacgttttggtatgataggtggataggggatgttcctctctgtgagcggtatcatagactgtttgagttaatggag 12378508  T
Q  192 aataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggact 291  Q
    |||||| | |||||||||||| | ||||| | |||| | ||| ||| |||||||| ||||| |||| |||| || |||||||||||||||||||||||      
T  12378509 aataagatcatgtctgtggcaaatttgttctttgttaagtcgaagcggtggggggatttgttgaggcggaggcgcaggttgtggcagtgggaggaggaga 12378608  T
Q  292 tgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||||||||||||||||   ||||||||||||    
T  12378609 tgttagcggagtgtagggc---acttcttgatgt 12378639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 45943152 - 45943077
Alignment:
Q  250 tgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||||||||||| |||| || ||||||||||||||||| ||| ||| |||||||||||||||||||||||||||    
T  45943152 tgtggaggtggagatgtagattatggcagtgggaggaggagttgctagaggagtgtagggctttacttcttgatgt 45943077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 316
Target Start/End: Complemental strand, 43105669 - 43105546
Alignment:
Q  193 ataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggactt 292  Q
    |||||| | |||| |||||||||||||| |||  |  |||| | || ||||| | ||||||||||||||| || ||||||||||| |||||||||||  |    
T  43105669 ataagtctttgtcggtggcagacttgttctctactagttcgcaacaatggggagatttgtggaggtggaggcgcaggttgtggcaatgggaggaggagat 43105570  T
Q  293 gttagcggagtgtagggctttact 316  Q
    |||||| ||||||||||| |||||    
T  43105569 gttagcagagtgtagggcgttact 43105546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 17856185 - 17856106
Alignment:
Q  102 gatggagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttga 181  Q
    ||||| |||||||||||||||||||   |||||||||| || |||||||||||| |||  || || |||||| |||||||    
T  17856185 gatggtgctgatacgttgttttggtctcataggtggtttggtgatgttccttttagtgagcggtttcgtaggttgtttga 17856106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 326
Target Start/End: Complemental strand, 41339825 - 41339750
Alignment:
Q  251 gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgtc 326  Q
    |||||||||| || | |||||||||  |||||||||||| || |||| |||||||||| |||||||  ||||||||    
T  41339825 gtggaggtggcgatgcaggttgtgggcgtgggaggaggaattattagaggagtgtaggactttactatttgatgtc 41339750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 325
Target Start/End: Complemental strand, 19728787 - 19728713
Alignment:
Q  251 gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||| |||||||| |||||||||  |||||||||||  || |||| |||||||||||  ||||| ||||||||    
T  19728787 gtggagttggagacggaggttgtgggcgtgggaggaggttttattagaggagtgtagggtcttactacttgatgt 19728713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 317
Target Start/End: Original strand, 27723973 - 27724011
Alignment:
Q  279 tgggaggaggacttgttagcggagtgtagggctttactt 317  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  27723973 tgggaggaagacttgttaggggagtgtagggctttactt 27724011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 46623964 - 46623931
Alignment:
Q  292 tgttagcggagtgtagggctttacttcttgatgt 325  Q
    ||||||| ||||||||||||||||||||||||||    
T  46623964 tgttagcagagtgtagggctttacttcttgatgt 46623931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 45992870 - 45992802
Alignment:
Q  257 gtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||| || || ||||||  ||||||||||||  |||||| ||||||||||||||| || ||||||||    
T  45992870 gtggaggcggagattgtgggcgtgggaggaggagatgttagtggagtgtagggcttttctgcttgatgt 45992802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 176; Significance: 9e-95; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 6 - 325
Target Start/End: Complemental strand, 7452897 - 7452578
Alignment:
Q  6 gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggagatg 105  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||  || ||  |||| |||||| |    |  ||||||| ||||||||||||||    
T  7452897 gtttcgtgttggtggagggaggtgagtcgtcttagggatagtgttggtgagggtgattgtgggtggtttctcgcccacgtggctaggagggttggagatg 7452798  T
Q  106 gagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtc 205  Q
    |  ||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||| |||||||    
T  7452797 gttctgatacgttgttttggtatgataggtggttaggggatgttcctttctgtgtccgttttcgtagactgtttgagttaacggagaataagcttatgtc 7452698  T
Q  206 tgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgt 305  Q
    ||||||||||||||| |||||||||| |||||||  ||||||| | ||||||||||| ||||| |||||||||||||||||||  || |||| |||||||    
T  7452697 tgtggcagacttgttctctgttgatttggagcagcagggggttgtttggaggtggaggcgtagattgtggcagtgggaggaggtgttattagaggagtgt 7452598  T
Q  306 agggctttacttcttgatgt 325  Q
    ||||||||||||||||||||    
T  7452597 agggctttacttcttgatgt 7452578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 120 - 325
Target Start/End: Original strand, 16420719 - 16420924
Alignment:
Q  120 ttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgt 219  Q
    |||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||||||||| ||||||     
T  16420719 ttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtggccgacttgc 16420818  T
Q  220 tatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttct 319  Q
    | |||||||||||||||| ||||||||   |||||||||||||||||||||| ||||||||||||||||| ||| |||  ||| ||||||||||||||||    
T  16420819 tctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagcgtagggctttacttct 16420918  T
Q  320 tgatgt 325  Q
     |||||    
T  16420919 cgatgt 16420924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 325
Target Start/End: Original strand, 19384572 - 19384624
Alignment:
Q  273 tggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  19384572 tggcagtgggaggaggagatgttagtggagtgtagggctttacttcttgatgt 19384624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 316
Target Start/End: Complemental strand, 12134628 - 12134563
Alignment:
Q  251 gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttact 316  Q
    |||||||||| | |||| |||||||  |||||||||||||||| ||| ||||||||||||||||||    
T  12134628 gtggaggtggcggcgtacgttgtgggcgtgggaggaggacttggtagaggagtgtagggctttact 12134563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 13879354 - 13879390
Alignment:
Q  278 gtgggaggaggacttgttagcggagtgtagggcttta 314  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  13879354 gtgggaggaggacttggtagaggagtgtagggcttta 13879390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 154; Significance: 1e-81; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 9 - 325
Target Start/End: Complemental strand, 45422062 - 45421745
Alignment:
Q  9 tcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggagatggag 108  Q
    ||||||||||||||||||||||||||| |||||| ||||| |||||  || ||  |||| ||||||| |  ||  ||||||| ||||||||| |||||      
T  45422062 tcgtgttggtggagggaggtgagtcgtattagggatagtgctggtgagggtgactgtgggtggtttggtggtcacgtggctaggagggttggtgatggtt 45421963  T
Q  109 ctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgt 208  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||  ||||||||||||||||||||||| | |||| |||    
T  45421962 ctgatacgttgttttggttggataggtggttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaacagagaataagctcatgtatgt 45421863  T
Q  209 ggcagacttgttatctgttgattcggagcag-tggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtag 307  Q
    |||||||||||| |||||||||  |||||||  ||||  |||| ||||||||||| ||||| |||| |||||||||||||||  ||||||||||||||||    
T  45421862 ggcagacttgttctctgttgatctggagcagcaggggttttttttggaggtggaggcgtagattgtcgcagtgggaggaggagatgttagcggagtgtag 45421763  T
Q  308 ggctttacttcttgatgt 325  Q
    |||||| |||||||||||    
T  45421762 ggcttttcttcttgatgt 45421745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 4 - 325
Target Start/End: Complemental strand, 13550671 - 13550350
Alignment:
Q  4 gagtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggaga 103  Q
    ||||||| |||||||||  |||||||||||||||||||||||| ||||||| ||| |  || || |||||||   |||  |||   | ||| ||||| ||    
T  13550671 gagtttcttgttggtggtcggaggtgagtcgtcttaggggtagggttggtgttggtggtagcggctggtttgaggatcaggtgttgaggagagttggtga 13550572  T
Q  104 tggagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatg 203  Q
    ||| || ||||| |  |||||||| ||||||||| ||||||| | |||| || ||||  | ||  || || |||||||||||||||||||||||| |||     
T  13550571 tggggcagatacatcattttggttcgataggtggataggggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacagagaataagtctata 13550472  T
Q  204 tctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagt 303  Q
    |  ||||| |||||| | ||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| ||||||||| ||| |||||    
T  13550471 ttcgtggcggacttgctttctgttgattcggagcagtggggggatgtgtggaggtggagacgtaggttatggcagtgggatgaggacttgctagaggagt 13550372  T
Q  304 gtagggctttacttcttgatgt 325  Q
    | ||||||||| ||||||||||    
T  13550371 gcagggctttaattcttgatgt 13550350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 119 - 321
Target Start/End: Original strand, 26894320 - 26894522
Alignment:
Q  119 gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 218  Q
    ||||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||||||  | ||||||    
T  26894320 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtcaccgacttg 26894419  T
Q  219 ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 318  Q
     | ||||||| |||||||| |||||||    |||||||||||||||||||||| ||||||||||||||||| ||| |||  |||||||||||||||||||    
T  26894420 ctctctgttgcttcggagcggtgggggaaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc 26894519  T
Q  319 ttg 321  Q
    |||    
T  26894520 ttg 26894522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 119 - 321
Target Start/End: Original strand, 26899759 - 26899961
Alignment:
Q  119 gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 218  Q
    ||||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||||||  | ||||||    
T  26899759 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtctgtcaccgacttg 26899858  T
Q  219 ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 318  Q
     | ||||||| |||||||| |||||||    |||||||||||||||||||||| ||||||||||||||||| ||| |||  |||||||||||||||||||    
T  26899859 ctctctgttgcttcggagcggtgggggaaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc 26899958  T
Q  319 ttg 321  Q
    |||    
T  26899959 ttg 26899961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 175 - 325
Target Start/End: Complemental strand, 43627875 - 43627725
Alignment:
Q  175 tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtg 274  Q
    |||||||||||||||||||||||| |||||  ||||| |||||| | ||| |||||||||||  ||||||||   |||||||||||||||||||||| ||    
T  43627875 tgtttgagttaacagagaataagtctatgttcgtggccgacttgctctctattgattcggagaggtggggggaggtgtggaggtggagacgtaggttatg 43627776  T
Q  275 gcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    ||||||||||||||| ||| |||  ||||||||||||||||||||||||||    
T  43627775 gcagtgggaggaggagttgctagatgagtgtagggctttacttcttgatgt 43627725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 226 - 325
Target Start/End: Original strand, 31085452 - 31085551
Alignment:
Q  226 ttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    ||||||| ||||||||||||| | |||||||||||||| | |||||||| ||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  31085452 ttgattcagagcagtggggggatgtgtggaggtggagatgcaggttgtgacagtgggaggaggagctgttagcagagtgtagggctttacttcttgatgt 31085551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 33548197 - 33548098
Alignment:
Q  226 ttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||||||||| ||||||||   |||||||||||||||||||||| ||||||||||||||||| ||| |||  ||||||||||||||||||||||||||    
T  33548197 ttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttcttgatgt 33548098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 4 - 246
Target Start/End: Complemental strand, 13551124 - 13550882
Alignment:
Q  4 gagtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggaga 103  Q
    ||||||| |||||||||  |||||||||||||||||||||||| ||||||| ||| |  || || |||||||   |||  |||   | ||| ||||| ||    
T  13551124 gagtttcttgttggtggtcggaggtgagtcgtcttaggggtagggttggtgttggtggtagcggctggtttgaggatcaggtgttgaggagagttggtga 13551025  T
Q  104 tggagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatg 203  Q
    ||| || ||||| |  |||||||| ||||||||| ||||||| | |||| || ||||  | ||  || || |||||||||||||||||||||||| |||     
T  13551024 tggggcagatacatcattttggttcgataggtggataggggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacagagaataagtctata 13550925  T
Q  204 tctgtggcagacttgttatctgttgattcggagcagtgggggg 246  Q
    |  ||||| |||||| | |||||||||||||||||||||||||    
T  13550924 ttcgtggcggacttgctttctgttgattcggagcagtgggggg 13550882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 22052911 - 22052853
Alignment:
Q  267 aggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    ||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||||||||    
T  22052911 aggttatggcagtgggaggaggagttgctagaggagtgtagggctttacttcttgatgt 22052853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 326
Target Start/End: Complemental strand, 36804196 - 36804137
Alignment:
Q  267 aggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgtc 326  Q
    |||||||||  |||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  36804196 aggttgtgggcgtgggaggaggacttgttagaggagtgtagggctttactatttgatgtc 36804137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 36804400 - 36804352
Alignment:
Q  278 gtgggaggaggacttgttagcggagtgtagggctttacttcttgatgtc 326  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  36804400 gtgggaggaggacttgttagaggagtgtagggctttactatttgatgtc 36804352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 22725129 - 22725212
Alignment:
Q  102 gatggagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagtta 185  Q
    ||||| ||||| ||| |||||||||| ||||| ||||| |||   ||||||||||||||  | ||||||||| |||||||||||    
T  22725129 gatggggctgacacgatgttttggtttgatagatggttggggccggttcctttttgtgtgtgattccgtaggttgtttgagtta 22725212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 26679266 - 26679225
Alignment:
Q  120 ttttggttggataggtggttaggggatgttcctttttgtgtc 161  Q
    |||||||||||||||||| | || ||||||||||||||||||    
T  26679266 ttttggttggataggtgggttggtgatgttcctttttgtgtc 26679225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 40176941 - 40176905
Alignment:
Q  278 gtgggaggaggacttgttagcggagtgtagggcttta 314  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  40176941 gtgggaggaggacttggtagaggagtgtagggcttta 40176905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 4144 - 4337
Alignment:
Q  6 gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggagatg 105  Q
    |||||||| ||||||||||||||||||||| |||||||||||| ||||| ||||||||| || ||||||||| ||| |||||||  ||||||||||||||    
T  4144 gtttcgtggtggtggagggaggtgagtcgtattaggggtagtgatggtgatggagagagcggttggtttgttgatcatgtggctcggagggttggagatg 4243  T
Q  106 gagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtt 199  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  4244 gagctcatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgttttcgtaggctgtttgagttaatagagaataagtt 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 4 - 325
Target Start/End: Complemental strand, 26205895 - 26205574
Alignment:
Q  4 gagtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggaga 103  Q
    ||||||| |||||||||  |||||||||||||||||||||||| ||||||| ||| |  || || ||||||    |||  |||   | ||| ||||| ||    
T  26205895 gagtttcttgttggtggtcggaggtgagtcgtcttaggggtagggttggtgttggtggtagcggttggtttaaggatcaggtgttgaggagagttggtga 26205796  T
Q  104 tggagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatg 203  Q
    ||  |||||||| | ||||||||| ||||||||| || |||| | |||| || ||||  | ||  || || |||||||||||||| ||||||||||||||    
T  26205795 tgaggctgatacatcgttttggttcgataggtggataagggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacaaagaataagtttatg 26205696  T
Q  204 tctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagt 303  Q
    || ||||| |||||| |||||||||||||  ||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||| ||| ||| |||||    
T  26205695 tccgtggcggacttgctatctgttgattcaaagcggtggggggatttgtggaggtggatacgtaggttatggcagtgggaggaggagttgctagaggagt 26205596  T
Q  304 gtagggctttacttcttgatgt 325  Q
    ||||||||||||||||||||||    
T  26205595 gtagggctttacttcttgatgt 26205574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 4 - 325
Target Start/End: Complemental strand, 25318401 - 25318080
Alignment:
Q  4 gagtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtgctggagagagtggatggtttgttaatcttgtggctatgagggttggaga 103  Q
    ||||||| |||||||||  ||||||||||||||||||| |||| ||||||| ||| |  || || ||||||    |||  |||   | ||| ||||| ||    
T  25318401 gagtttcttgttggtggtcggaggtgagtcgtcttaggtgtagggttggtgttggtggtagcggttggtttaaggatcaggtgttgaggagagttggtga 25318302  T
Q  104 tggagctgatacgttgttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatg 203  Q
    ||  |||||||| | ||||||||| ||||||||| || |||| | |||| || ||||  | ||  || || |||||||||||||| ||||||||||||||    
T  25318301 tgaggctgatacatcgttttggttcgataggtggataagggaggctcctcttcgtgtgaggtttagtcggttgtttgagttaacaaagaataagtttatg 25318202  T
Q  204 tctgtggcagacttgttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagt 303  Q
    || ||||| |||||| |||||||||||||  ||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||| ||| ||| |||||    
T  25318201 tccgtggcggacttgctatctgttgattcaaagcggtggggggatttgtggaggtggatacgtaggttatggcagtgggaggaggagttgctagaggagt 25318102  T
Q  304 gtagggctttacttcttgatgt 325  Q
    ||||||||||||||||||||||    
T  25318101 gtagggctttacttcttgatgt 25318080  T

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Target: chr6; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 119 - 325
Target Start/End: Original strand, 23347175 - 23347381
Alignment:
Q  119 gttttggttggataggtggttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttg 218  Q
    ||||||||  ||||||||| ||||||| | |||| ||||||| || ||  |  || |||||||||||||||||||||||| |||||| || || ||||||    
T  23347175 gttttggtctgataggtggataggggaggctcctctttgtgtgcggtttaggcggttgtttgagttaacagagaataagtctatgtccgtcgccgacttg 23347274  T
Q  219 ttatctgttgattcggagcagtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttc 318  Q
     | |||||||||||||||| ||||||||   |||||||||||||||||||||| ||||||||||||||||| ||| |||  |||||||||||||||||||    
T  23347275 ctctctgttgattcggagcggtggggggaggtgtggaggtggagacgtaggttatggcagtgggaggaggagttgctagatgagtgtagggctttacttc 23347374  T
Q  319 ttgatgt 325  Q
    |||||||    
T  23347375 ttgatgt 23347381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 175 - 325
Target Start/End: Complemental strand, 15674205 - 15674051
Alignment:
Q  175 tgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagcagtgggg----ggttttgtggaggtggagacgtaggt 270  Q
    ||||||||||||| |||||||||| |||||||||||| |||||  | ||||||||||| ||||  |||||    ||   |||||||||||||||||||||    
T  15674205 tgtttgagttaacggagaataagtctatgtctgtggccgacttactctctgttgattcagagcgttggggccggggaggtgtggaggtggagacgtaggt 15674106  T
Q  271 tgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    ||||||||||||||||||| ||| |||  ||||| ||||||||||||||||||||    
T  15674105 tgtggcagtgggaggaggagttgctagatgagtgcagggctttacttcttgatgt 15674051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 325
Target Start/End: Complemental strand, 33630378 - 33630323
Alignment:
Q  270 ttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| || |||||||    
T  33630378 ttgtggcagtgggaggaggagatgttagcggagtgtagggctttattttttgatgt 33630323  T

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Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 1683299 - 1683266
Alignment:
Q  292 tgttagcggagtgtagggctttacttcttgatgt 325  Q
    ||||||||||||||||||||||||||||||||||    
T  1683299 tgttagcggagtgtagggctttacttcttgatgt 1683266  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 4474998 - 4474935
Alignment:
Q  251 gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggcttta 314  Q
    |||||||||||||||||||||||||  |||||||||| | || |||| ||||| |||| |||||    
T  4474998 gtggaggtggagacgtaggttgtgggcgtgggaggagaatttattagaggagtttaggacttta 4474935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 19255934 - 19255866
Alignment:
Q  257 gtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||| || || ||||||  ||||||||||||  |||||| ||||||||||||||| || ||||||||    
T  19255934 gtggaggcggagattgtgggcgtgggaggaggagatgttagtggagtgtagggcttttctgcttgatgt 19255866  T

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Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 33640212 - 33640144
Alignment:
Q  257 gtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||| || || ||||||  ||||||||||||  |||||| ||||||||||||||| || ||||||||    
T  33640212 gtggaggcggagattgtgggcgtgggaggaggagatgttagtggagtgtagggcttttctgcttgatgt 33640144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 104; Significance: 8e-52; HSPs: 2)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 138 - 325
Target Start/End: Complemental strand, 8088 - 7901
Alignment:
Q  138 ttaggggatgttcctttttgtgtccgtttccgtaggctgtttgagttaacagagaataagtttatgtctgtggcagacttgttatctgttgattcggagc 237  Q
    |||||||||||||| || ||||||||||| |||||  |||||||||||| |||||||||| | |||||| ||||||||||||| |||||||||| |||||    
T  8088 ttaggggatgttccgttctgtgtccgttttcgtagattgtttgagttaatagagaataagctcatgtctatggcagacttgttctctgttgatttggagc 7989  T
Q  238 agtggggggttttgtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    ||  |||| |||| ||||||||||| ||||| ||||||||||||||||||||  |||||| |||||||| ||||||||||||||||||    
T  7988 agcaggggtttttttggaggtggaggcgtagattgtggcagtgggaggaggagatgttagtggagtgtatggctttacttcttgatgt 7901  T

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Target: scaffold0418; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 8149 - 8102
Alignment:
Q  6 gtttcgtgttggtggagggaggtgagtcgtcttaggggtagtgttggtg 54  Q
    ||||||||||||||| |||||||||||||| |||||| ||||| |||||    
T  8149 gtttcgtgttggtgg-gggaggtgagtcgtattagggatagtggtggtg 8102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 325
Target Start/End: Original strand, 15490 - 15564
Alignment:
Q  251 gtggaggtggagacgtaggttgtggcagtgggaggaggacttgttagcggagtgtagggctttacttcttgatgt 325  Q
    |||||||||| | || || ||||||  ||||||||||||  |||||| ||||||||||||||||||  |||||||    
T  15490 gtggaggtggcgtcgcagattgtgggcgtgggaggaggatatgttagaggagtgtagggctttactatttgatgt 15564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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