View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9391_high_24 (Length: 210)
Name: NF9391_high_24
Description: NF9391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9391_high_24 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 181; Significance: 5e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 181; E-Value: 5e-98
Query Start/End: Original strand, 2 - 210
Target Start/End: Original strand, 14959305 - 14959513
Alignment:
| Q |
2 |
cattccatcacaaacaccaaacctacctaaaccaaacaatcctcatacatcaaacattaaactcaatctcaatctccttatcaaaaacctacccatttca |
101 |
Q |
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| T |
14959305 |
cattccatcacaaacaccaaacctacctaaaccaaacaatccttatacatcaaacattaaactcaatctcaatctccttatcaaaaatctacgcatttca |
14959404 |
T |
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| Q |
102 |
ctaaaacatcacaaacctcacaaatgtctccaaccaagataacaagacaatccaaagacaccaattcatccagcagtgcaccacaaccaccaccctacca |
201 |
Q |
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| T |
14959405 |
ctaaaacatcaaaaacctcacaaatgtctccaaccaagataacaagacaatccaaagacaccaatgcatccaacaatgcaccacaaccaccaccctacca |
14959504 |
T |
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| Q |
202 |
aagcttcaa |
210 |
Q |
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||||||||| |
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| T |
14959505 |
aagcttcaa |
14959513 |
T |
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