View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9391_low_17 (Length: 369)
Name: NF9391_low_17
Description: NF9391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9391_low_17 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 1 - 369
Target Start/End: Complemental strand, 7120485 - 7120118
Alignment:
| Q |
1 |
agtaattaaccttccatcttttctcatgtctcaactctttactgcatttacttatttcctgtatgatttgttatagtatgttcttaaataaaagattctg |
100 |
Q |
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| T |
7120485 |
agtaattaaccttccatcttttctcatgtctcaactctttactgcatttacttatttcctgtatgatttgttatagtatgttcttaaataaaagattctg |
7120386 |
T |
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| Q |
101 |
tttcttagaaaaaataggaaggcgggatattttttgaatgtggttgagtggtttgcactaactgaaattctattcatactaaactcttaacagtagacat |
200 |
Q |
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| T |
7120385 |
tttcttagaaaaa-taggaaggcgggatattttttgaatgtggtcgagtggtttgcactaactgaaattctattcatactaaactcttaacattagacat |
7120287 |
T |
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| Q |
201 |
ttaaaaggagattaataatattgctacttcctaagtgcatgtatcatattttttagatacatgactaactatgtagatgaaccaagttgttaaaactcca |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7120286 |
ttaaaaggagattaataatattgctacttcctaagtgcatgtatcatattttctagatacatgactaactatgtagatgaaccaagttgttaaaactcca |
7120187 |
T |
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| Q |
301 |
tactaacatcaatttcaacatatatttaccaacatatagacttgtagttactgcatgacaatgaacact |
369 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7120186 |
tactaacatcaatttcaacatatatttaccaacatatagacttgtagttactgcatgacaatgaacact |
7120118 |
T |
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