View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9391_low_32 (Length: 273)

Name: NF9391_low_32
Description: NF9391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9391_low_32
NF9391_low_32
[»] chr4 (60 HSPs)
chr4 (20-255)||(13497992-13498227)
chr4 (122-252)||(31494638-31494768)
chr4 (121-240)||(31010403-31010522)
chr4 (122-240)||(55120105-55120223)
chr4 (120-252)||(51018355-51018486)
chr4 (123-246)||(35675168-35675291)
chr4 (150-246)||(52341609-52341705)
chr4 (149-222)||(42627103-42627176)
chr4 (148-252)||(26040363-26040467)
chr4 (150-250)||(30199791-30199891)
chr4 (166-249)||(13966564-13966647)
chr4 (148-250)||(29462805-29462907)
chr4 (149-239)||(34016640-34016730)
chr4 (148-246)||(35808399-35808497)
chr4 (149-230)||(35511184-35511265)
chr4 (125-246)||(35927254-35927375)
chr4 (149-246)||(48513627-48513724)
chr4 (148-229)||(55669764-55669845)
chr4 (121-241)||(32584495-32584615)
chr4 (160-252)||(36486701-36486793)
chr4 (121-252)||(52895726-52895856)
chr4 (124-246)||(30617957-30618079)
chr4 (156-246)||(41956224-41956314)
chr4 (149-239)||(51266939-51267029)
chr4 (149-250)||(53484619-53484720)
chr4 (162-246)||(10100130-10100214)
chr4 (162-246)||(30475433-30475517)
chr4 (162-246)||(31754946-31755030)
chr4 (162-246)||(32131150-32131234)
chr4 (124-240)||(33803386-33803501)
chr4 (124-242)||(27545874-27545992)
chr4 (164-246)||(966590-966671)
chr4 (124-250)||(40593606-40593731)
chr4 (150-252)||(40988216-40988317)
chr4 (162-252)||(54339115-54339204)
chr4 (121-230)||(20435766-20435875)
chr4 (149-229)||(23260729-23260810)
chr4 (149-252)||(23690925-23691026)
chr4 (162-246)||(23765586-23765670)
chr4 (149-241)||(52021045-52021137)
chr4 (167-246)||(19328950-19329029)
chr4 (162-245)||(33951709-33951792)
chr4 (181-247)||(46823479-46823545)
chr4 (173-246)||(15986274-15986347)
chr4 (142-219)||(19876180-19876257)
chr4 (149-246)||(50514618-50514714)
chr4 (182-250)||(31168138-31168206)
chr4 (162-246)||(2362637-2362723)
chr4 (162-229)||(20811288-20811355)
chr4 (156-239)||(26831797-26831880)
chr4 (148-246)||(34316725-34316824)
chr4 (173-240)||(44478715-44478782)
chr4 (175-246)||(47188695-47188766)
chr4 (148-246)||(1457538-1457636)
chr4 (163-229)||(27839324-27839390)
chr4 (125-239)||(45688758-45688872)
chr4 (163-236)||(3472141-3472214)
chr4 (121-238)||(22376270-22376387)
chr4 (148-224)||(55465465-55465541)
chr4 (122-246)||(3769821-3769945)
[»] chr1 (50 HSPs)
chr1 (120-252)||(14331839-14331971)
chr1 (120-252)||(44359644-44359776)
chr1 (125-240)||(16691308-16691423)
chr1 (121-252)||(43168143-43168274)
chr1 (124-252)||(48938638-48938765)
chr1 (122-250)||(17402952-17403080)
chr1 (120-252)||(8892743-8892875)
chr1 (120-240)||(41898832-41898951)
chr1 (148-246)||(41147478-41147576)
chr1 (148-248)||(11385810-11385910)
chr1 (162-246)||(11385989-11386073)
chr1 (150-246)||(49901934-49902030)
chr1 (162-246)||(42607338-42607422)
chr1 (166-250)||(51424161-51424245)
chr1 (121-224)||(39323434-39323537)
chr1 (148-246)||(34874575-34874673)
chr1 (148-229)||(4940740-4940821)
chr1 (149-251)||(40920188-40920292)
chr1 (148-229)||(45721777-45721858)
chr1 (162-246)||(6170565-6170649)
chr1 (149-229)||(27210750-27210830)
chr1 (162-246)||(33929974-33930058)
chr1 (162-246)||(50154481-50154565)
chr1 (163-246)||(22346252-22346335)
chr1 (124-250)||(34644169-34644293)
chr1 (164-239)||(50295449-50295524)
chr1 (162-244)||(40845261-40845343)
chr1 (120-242)||(41492921-41493042)
chr1 (148-246)||(49508734-49508831)
chr1 (138-239)||(932147-932248)
chr1 (155-252)||(25177456-25177553)
chr1 (163-252)||(28850925-28851013)
chr1 (148-229)||(52396468-52396548)
chr1 (162-246)||(27209735-27209819)
chr1 (162-246)||(47655385-47655469)
chr1 (138-229)||(2125697-2125788)
chr1 (148-246)||(29966830-29966929)
chr1 (124-182)||(21631209-21631267)
chr1 (148-229)||(7190475-7190556)
chr1 (148-245)||(43433784-43433881)
chr1 (124-169)||(46296176-46296221)
chr1 (162-246)||(24140781-24140865)
chr1 (162-246)||(26469596-26469680)
chr1 (182-246)||(32213923-32213987)
chr1 (150-229)||(2496065-2496144)
chr1 (122-245)||(27934996-27935119)
chr1 (149-212)||(42064502-42064565)
chr1 (150-239)||(28277484-28277573)
chr1 (163-239)||(4656031-4656107)
chr1 (173-245)||(8414842-8414914)
[»] chr6 (22 HSPs)
chr6 (131-250)||(27127493-27127612)
chr6 (124-252)||(12226311-12226438)
chr6 (148-246)||(28014643-28014741)
chr6 (120-229)||(1947430-1947539)
chr6 (163-252)||(29964303-29964392)
chr6 (163-250)||(14232509-14232596)
chr6 (122-248)||(6507366-6507492)
chr6 (149-222)||(12775142-12775215)
chr6 (120-229)||(31220302-31220411)
chr6 (162-229)||(12175584-12175651)
chr6 (165-246)||(7875201-7875282)
chr6 (148-239)||(6866930-6867021)
chr6 (148-239)||(12191508-12191599)
chr6 (124-191)||(13000193-13000260)
chr6 (162-229)||(29692358-29692425)
chr6 (205-252)||(34780038-34780085)
chr6 (162-239)||(10855447-10855524)
chr6 (173-229)||(22414619-22414675)
chr6 (148-224)||(28541986-28542062)
chr6 (187-246)||(21186059-21186118)
chr6 (165-239)||(7880447-7880521)
chr6 (178-238)||(20027307-20027367)
[»] chr3 (39 HSPs)
chr3 (120-246)||(34060740-34060867)
chr3 (121-248)||(18763-18890)
chr3 (120-250)||(45899518-45899649)
chr3 (121-252)||(51256050-51256180)
chr3 (148-246)||(36730156-36730254)
chr3 (162-246)||(11675321-11675403)
chr3 (149-229)||(26850498-26850578)
chr3 (162-246)||(29915592-29915676)
chr3 (162-246)||(29964745-29964829)
chr3 (156-252)||(39436467-39436563)
chr3 (156-239)||(51817323-51817406)
chr3 (164-246)||(8715520-8715602)
chr3 (164-246)||(9067407-9067489)
chr3 (164-246)||(52570790-52570872)
chr3 (163-248)||(18946-19031)
chr3 (149-250)||(8847456-8847557)
chr3 (149-246)||(46317494-46317591)
chr3 (162-246)||(4759867-4759951)
chr3 (121-192)||(27863978-27864049)
chr3 (148-245)||(271175-271266)
chr3 (131-229)||(15502622-15502720)
chr3 (149-239)||(44695675-44695765)
chr3 (173-246)||(11316974-11317047)
chr3 (148-241)||(48313841-48313934)
chr3 (143-219)||(13647034-13647110)
chr3 (149-229)||(49976145-49976225)
chr3 (120-221)||(2310709-2310811)
chr3 (182-252)||(37509113-37509183)
chr3 (162-246)||(4542370-4542454)
chr3 (162-246)||(10854867-10854951)
chr3 (186-246)||(12905323-12905383)
chr3 (162-246)||(32415577-32415661)
chr3 (165-245)||(39974826-39974906)
chr3 (148-223)||(1803919-1803994)
chr3 (173-224)||(6822827-6822878)
chr3 (120-246)||(12060034-12060160)
chr3 (162-252)||(25102339-25102428)
chr3 (182-239)||(44570423-44570480)
chr3 (163-239)||(12051053-12051129)
[»] chr8 (38 HSPs)
chr8 (120-245)||(7532796-7532919)
chr8 (120-252)||(11295439-11295571)
chr8 (125-252)||(11332774-11332901)
chr8 (125-229)||(31596401-31596505)
chr8 (150-245)||(34421323-34421418)
chr8 (120-229)||(20169310-20169419)
chr8 (148-252)||(38870006-38870110)
chr8 (149-252)||(24304944-24305046)
chr8 (164-246)||(25249360-25249442)
chr8 (148-229)||(19389313-19389394)
chr8 (162-250)||(26672794-26672882)
chr8 (162-229)||(3174485-3174552)
chr8 (166-252)||(10694809-10694895)
chr8 (155-229)||(26892811-26892885)
chr8 (120-246)||(39972127-39972253)
chr8 (148-229)||(4989958-4990039)
chr8 (162-239)||(18068977-18069054)
chr8 (165-245)||(4308818-4308898)
chr8 (149-229)||(8018786-8018866)
chr8 (162-246)||(21016242-21016326)
chr8 (150-241)||(6396278-6396369)
chr8 (166-229)||(8210175-8210238)
chr8 (173-246)||(30351599-30351673)
chr8 (148-222)||(35930168-35930242)
chr8 (155-228)||(6841706-6841779)
chr8 (120-197)||(28280474-28280551)
chr8 (148-229)||(45338029-45338110)
chr8 (162-246)||(6939166-6939250)
chr8 (162-246)||(21016074-21016158)
chr8 (149-245)||(25381672-25381767)
chr8 (163-246)||(6433552-6433635)
chr8 (162-245)||(26195390-26195473)
chr8 (149-210)||(13284143-13284204)
chr8 (201-250)||(20212445-20212494)
chr8 (199-252)||(33741528-33741581)
chr8 (143-224)||(44874355-44874436)
chr8 (149-229)||(25636694-25636773)
chr8 (120-204)||(36766621-36766705)
[»] chr5 (36 HSPs)
chr5 (125-245)||(39335482-39335602)
chr5 (125-252)||(4293811-4293938)
chr5 (123-240)||(39069256-39069371)
chr5 (122-250)||(678454-678582)
chr5 (152-240)||(38610299-38610387)
chr5 (121-252)||(39167598-39167728)
chr5 (125-242)||(3015030-3015147)
chr5 (122-222)||(17168708-17168808)
chr5 (162-246)||(39567911-39567995)
chr5 (162-229)||(8410167-8410234)
chr5 (120-246)||(27535105-27535230)
chr5 (162-246)||(43414081-43414165)
chr5 (148-251)||(1759820-1759923)
chr5 (142-229)||(25017288-25017375)
chr5 (163-229)||(12068192-12068258)
chr5 (142-246)||(35653252-35653356)
chr5 (148-239)||(4421967-4422058)
chr5 (142-252)||(10163623-10163733)
chr5 (125-224)||(38508035-38508134)
chr5 (149-251)||(3241957-3242059)
chr5 (148-222)||(27823291-27823365)
chr5 (162-239)||(5151504-5151581)
chr5 (165-245)||(19894827-19894907)
chr5 (162-228)||(3639092-3639158)
chr5 (168-246)||(28599677-28599755)
chr5 (162-239)||(338781-338858)
chr5 (162-239)||(37243862-37243939)
chr5 (150-221)||(8454525-8454596)
chr5 (167-241)||(20184570-20184644)
chr5 (140-229)||(1479131-1479220)
chr5 (155-251)||(6823762-6823859)
chr5 (162-246)||(16315551-16315633)
chr5 (208-245)||(16899635-16899672)
chr5 (162-239)||(28143140-28143217)
chr5 (163-239)||(4962534-4962610)
chr5 (162-246)||(25568309-25568393)
[»] chr2 (42 HSPs)
chr2 (121-252)||(12695212-12695345)
chr2 (149-245)||(2239591-2239687)
chr2 (123-252)||(11659264-11659393)
chr2 (162-246)||(6999210-6999294)
chr2 (150-249)||(40798330-40798427)
chr2 (121-241)||(2805394-2805516)
chr2 (151-245)||(34334167-34334261)
chr2 (162-246)||(862597-862681)
chr2 (148-250)||(1321172-1321274)
chr2 (146-252)||(34392552-34392655)
chr2 (124-229)||(2209895-2210000)
chr2 (120-240)||(33849000-33849120)
chr2 (156-252)||(33864357-33864453)
chr2 (149-252)||(2966542-2966645)
chr2 (162-229)||(17603836-17603903)
chr2 (120-239)||(34220621-34220740)
chr2 (148-246)||(765153-765251)
chr2 (162-239)||(39085809-39085886)
chr2 (148-245)||(39401538-39401634)
chr2 (148-249)||(44299684-44299785)
chr2 (149-229)||(30831643-30831723)
chr2 (162-246)||(41436486-41436570)
chr2 (163-246)||(16361574-16361657)
chr2 (148-239)||(33726395-33726486)
chr2 (124-246)||(29260107-29260229)
chr2 (187-252)||(17095108-17095173)
chr2 (162-245)||(35445307-35445391)
chr2 (125-221)||(37230253-37230349)
chr2 (152-246)||(747498-747592)
chr2 (162-252)||(10900267-10900357)
chr2 (162-228)||(17118390-17118456)
chr2 (162-239)||(9201512-9201589)
chr2 (188-229)||(9965098-9965139)
chr2 (187-252)||(17056099-17056164)
chr2 (187-252)||(17068546-17068611)
chr2 (160-245)||(44173128-44173213)
chr2 (157-245)||(2136445-2136533)
chr2 (149-245)||(3454702-3454797)
chr2 (165-229)||(10522816-10522880)
chr2 (163-239)||(13997922-13997998)
chr2 (181-229)||(23685688-23685736)
chr2 (168-224)||(31167624-31167680)
[»] chr7 (58 HSPs)
chr7 (123-246)||(1907567-1907690)
chr7 (142-239)||(29034702-29034799)
chr7 (131-246)||(42552458-42552572)
chr7 (162-245)||(42222230-42222313)
chr7 (148-246)||(43567509-43567607)
chr7 (120-252)||(41769623-41769756)
chr7 (120-229)||(44391020-44391129)
chr7 (125-251)||(3863045-3863171)
chr7 (120-246)||(46042756-46042881)
chr7 (148-229)||(36279144-36279225)
chr7 (156-229)||(41188797-41188870)
chr7 (124-245)||(49069564-49069685)
chr7 (162-246)||(5240349-5240433)
chr7 (162-246)||(8380449-8380533)
chr7 (149-243)||(3720118-3720212)
chr7 (122-216)||(31360269-31360363)
chr7 (162-250)||(1910248-1910336)
chr7 (162-246)||(24359725-24359809)
chr7 (162-246)||(27053510-27053594)
chr7 (148-240)||(29247937-29248028)
chr7 (148-252)||(40763251-40763355)
chr7 (149-229)||(40774246-40774326)
chr7 (149-229)||(43958087-43958167)
chr7 (183-246)||(29687484-29687547)
chr7 (162-229)||(30538497-30538564)
chr7 (147-222)||(40066919-40066994)
chr7 (148-246)||(22521594-22521692)
chr7 (147-241)||(44478396-44478490)
chr7 (149-246)||(16082437-16082533)
chr7 (148-245)||(27236812-27236909)
chr7 (180-229)||(30388695-30388744)
chr7 (166-251)||(32204185-32204270)
chr7 (148-229)||(48454825-48454906)
chr7 (182-246)||(3681702-3681766)
chr7 (182-246)||(6548538-6548602)
chr7 (150-246)||(7322958-7323054)
chr7 (162-246)||(40194834-40194918)
chr7 (148-239)||(8292760-8292851)
chr7 (181-252)||(16931893-16931963)
chr7 (181-252)||(16937276-16937346)
chr7 (123-182)||(23709842-23709901)
chr7 (131-222)||(35003637-35003727)
chr7 (199-250)||(35404308-35404359)
chr7 (123-252)||(42291282-42291413)
chr7 (149-191)||(9887210-9887252)
chr7 (131-229)||(35239773-35239871)
chr7 (181-246)||(8258674-8258739)
chr7 (162-243)||(18800166-18800246)
chr7 (121-194)||(37848301-37848374)
chr7 (149-222)||(37869368-37869441)
chr7 (201-250)||(44296957-44297006)
chr7 (163-224)||(46423388-46423449)
chr7 (208-252)||(16957667-16957711)
chr7 (162-246)||(22707057-22707141)
chr7 (162-246)||(31626058-31626142)
chr7 (148-224)||(34111835-34111911)
chr7 (154-238)||(41141040-41141124)
chr7 (201-249)||(43189693-43189741)
[»] scaffold0144 (1 HSPs)
scaffold0144 (160-252)||(39591-39681)
[»] scaffold0050 (1 HSPs)
scaffold0050 (120-246)||(37364-37480)
[»] scaffold0062 (3 HSPs)
scaffold0062 (148-246)||(16775-16872)
scaffold0062 (148-246)||(26943-27040)
scaffold0062 (148-246)||(37109-37206)
[»] scaffold0002 (1 HSPs)
scaffold0002 (182-239)||(392169-392226)
[»] scaffold0045 (2 HSPs)
scaffold0045 (120-229)||(62553-62662)
scaffold0045 (120-229)||(69885-69994)


Alignment Details
Target: chr4 (Bit Score: 175; Significance: 3e-94; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 20 - 255
Target Start/End: Original strand, 13497992 - 13498227
Alignment:
Q  20 aggtacttctagttagtcttgaatctcttgataaacaacaatgcaggaatcctatttaaattatgaaataacgtaaaagagacaaattaaccannnnnnn 119  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||             
T  13497992 aggtacttctagttagtcttgaatctcttgttaaacaacaatgcaggaatcctatttaaattatgaaataacgaaaaagagacaaattaacatttttttt 13498091  T
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  13498092 atgggaaatgctaaagagtgtccttgatgcattggttaagatgataaaaatagaaatattgtattggaaaatagtaaagaacgatgaatttaacttttta 13498191  T
Q  220 aaagtcaaaactttgttgaatccaatgtaaatagta 255  Q
    ||||||||||||||||||||||||||||||| ||||    
T  13498192 aaagtcaaaactttgttgaatccaatgtaaacagta 13498227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 122 - 252
Target Start/End: Original strand, 31494638 - 31494768
Alignment:
Q  122 gggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaa 221  Q
    |||||||||||||||||| |||||  ||||| |||||||||||||||||| ||| |||||||| | ||||||| || | ||| |||||||||||||||||    
T  31494638 gggaaatgctaaagagtgctcttggggcattagttaagatgataaaaatagaaacattgtatttggaaatggtgaaaagtgaagaatttaactttttaaa 31494737  T
Q  222 agtcaaaactttgttgaatccaatgtaaata 252  Q
     | |||||| ||||||||| |||||||||||    
T  31494738 tgacaaaacattgttgaattcaatgtaaata 31494768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 121 - 240
Target Start/End: Original strand, 31010403 - 31010522
Alignment:
Q  121 agggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaa 220  Q
    |||||||||||||||||||  ||||  |||||||||||||||||||||||| ||| |||||||||  ||||| |||| | ||| ||||||||||||||||    
T  31010403 agggaaatgctaaagagtgcccttggagcattggttaagatgataaaaatagaaacattgtattgagaaatgataaaaagtgaagaatttaactttttaa 31010502  T
Q  221 aagtcaaaactttgttgaat 240  Q
    |||||||||| ||| |||||    
T  31010503 aagtcaaaacattgctgaat 31010522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 55120223 - 55120105
Alignment:
Q  122 gggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaa 221  Q
    |||||||| |||||| ||||||| | | |||||||||||||||||||||  ||||||||||||| ||||| || || ||||| |||||| ||||||||||    
T  55120223 gggaaatgttaaagaatgttcttaaggtattggttaagatgataaaaattaaaatattgtattgaaaaatagtgaaaaatgaagaatttgactttttaaa 55120124  T
Q  222 agtcaaaactttgttgaat 240  Q
    ||||||||| |||||||||    
T  55120123 agtcaaaacattgttgaat 55120105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 120 - 252
Target Start/End: Original strand, 51018355 - 51018486
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    |||||||||| |||| ||||| ||| | | |||||||||||||||||||||| ||| |||| |||| |||||||| || | ||| |||||||||||||||    
T  51018355 aagggaaatgttaaatagtgtccttaa-gtattggttaagatgataaaaatagaaacattgcattgaaaaatggtgaaaagtgaagaatttaacttttta 51018453  T
Q  220 aaagtcaaaactttgttgaatccaatgtaaata 252  Q
    ||| | ||||| ||||||||| |||||||||||    
T  51018454 aaaattaaaacattgttgaattcaatgtaaata 51018486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 246
Target Start/End: Original strand, 35675168 - 35675291
Alignment:
Q  123 ggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaa 222  Q
    |||||| ||||||| ||  ||||  ||||||||||||| |||||||||| |||||||||||||| |||| || || | ||||||||||||||||||||||    
T  35675168 ggaaattctaaagactgcccttggggcattggttaagacgataaaaatagaaatattgtattgggaaatagtgaaaagtgatgaatttaactttttaaaa 35675267  T
Q  223 gtcaaaactttgttgaatccaatg 246  Q
    || ||||  ||||||||| |||||    
T  35675268 gttaaaatattgttgaattcaatg 35675291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 52341705 - 52341609
Alignment:
Q  150 attggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| ||| |||| ||||| ||||||| | |||||||||| | || |||||||||||||||||||||||||||||||  |||||||||||||||    
T  52341705 attggttgagaggatacaaatagaaatattatgttggaaaatgatgaaaaatgatgaatttaactttttaaaagtcaaaatgttgttgaatccaatg 52341609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 42627103 - 42627176
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaa 222  Q
    ||||| ||||||||||||||||| ||||||||| || | ||||||| |||||||||||||||||||||||||||    
T  42627103 cattgattaagatgataaaaatagaaatattgttttaggaaatggtgaagaatgatgaatttaactttttaaaa 42627176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 26040363 - 26040467
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgt 247  Q
    ||||||| ||||  |||||||||| |||||| ||||||||||||||| || | |||| | ||||||||||||||||||||||  |||||||| ||||||     
T  26040363 gcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagtgataagtttaactttttaaaagtcaaaatattgttgaagccaatgc 26040462  T
Q  248 aaata 252  Q
    |||||    
T  26040463 aaata 26040467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 30199791 - 30199891
Alignment:
Q  150 attggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaa 249  Q
    |||| |||||| ||||||||||||||||||| |||| |||||| |||| | ||||||| |||| ||||||||||| ||||  || |||||||||||||||    
T  30199791 attgtttaagaggataaaaatataaatattgcattgaaaaatgataaaaagtgatgaaattaattttttaaaagttaaaatattattgaatccaatgtaa 30199890  T
Q  250 a 250  Q
    |    
T  30199891 a 30199891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 13966647 - 13966564
Alignment:
Q  166 aaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaa 249  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||| |||||||||||||  | |  ||||||||||||||||||    
T  13966647 aaaatataaatattgcattggaaaatggtaaaaaataatgaatttgactttttaaaagttgacatattgttgaatccaatgtaa 13966564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 29462907 - 29462805
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgt 247  Q
    |||||| |||||| |||||||||| ||||||| ||||| |||||| | || ||||| |||||| | ||||| ||||||||||  ||||||||||||||||    
T  29462907 gcattgtttaagaggataaaaataaaaatattatattgaaaaatgatgaaaaatgaggaattttattttttcaaagtcaaaatgttgttgaatccaatgt 29462808  T
Q  248 aaa 250  Q
    |||    
T  29462807 aaa 29462805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 239
Target Start/End: Complemental strand, 34016730 - 34016640
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    |||||| ||||  |||||||||| |||||| | ||||||||||||| || | |||||||||||||||||||||||||||||  ||||||||    
T  34016730 cattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgatgaatttaactttttaaaagtcaaaatgttgttgaa 34016640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 35808399 - 35808497
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| ||||  |||||||||| |||||| | |||||||||| || || |||||| ||||||||||||||||||||||||  |||||||| ||||||    
T  35808399 gcattggataaggggataaaaatagaaatatagcattggaaaattgtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 35808497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 35511184 - 35511265
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaac 230  Q
    |||||||||||  ||| |||||| |||||||||||||||||||||| || | |||||||||| ||||||||||||| |||||    
T  35511184 cattggttaagtagatgaaaatagaaatattgtattggaaaatggtgaaaagtgatgaatttgactttttaaaagttaaaac 35511265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 246
Target Start/End: Original strand, 35927254 - 35927375
Alignment:
Q  125 aaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagt 224  Q
    ||||| |||||||||| ||||   |||||||||||| || |||||||  ||| ||| ||| ||||||||| || || |||||||||||||||||||||||    
T  35927254 aaatgttaaagagtgtccttggaccattggttaagaagaaaaaaatagcaattttgcattagaaaatggtgaaaaacgatgaatttaactttttaaaagt 35927353  T
Q  225 caaaactttgttgaatccaatg 246  Q
     ||||  |||||||||| ||||    
T  35927354 taaaatattgttgaatctaatg 35927375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 48513724 - 48513627
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||||| |||||||||| ||| ||||||||| |||||| | || | |||   |||||||||||||||||||||||| ||||||||| |||||    
T  48513724 cattggttaagacgataaaaataaaaacattgtattgaaaaatgatgaaaagtgaaagatttaactttttaaaagtcaaaacattgttgaattcaatg 48513627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 55669845 - 55669764
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||| ||||  |||||||||| |||||| | ||||||||||||| || |||||| ||||||||||||||||||||||||    
T  55669845 gcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 55669764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 241
Target Start/End: Original strand, 32584495 - 32584615
Alignment:
Q  121 agggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaa 220  Q
    ||||||||| |||| |||   ||||| |||||| ||||||  ||| ||||||||||||||| || |||||||||||| | | ||||||| ||||||||||    
T  32584495 agggaaatgttaaaaagtccccttgaagcattgtttaagagaatacaaatataaatattgtgttagaaaatggtaaaaagtaatgaattcaactttttaa 32584594  T
Q  221 aagtcaaaactttgttgaatc 241  Q
    |||| ||||  ||||||||||    
T  32584595 aagttaaaatattgttgaatc 32584615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 252
Target Start/End: Original strand, 36486701 - 36486793
Alignment:
Q  160 atgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||||||||||||| ||| |||||||||||||| || | ||| |||||||| ||||||||||||||||  || |||||| | |||||||||    
T  36486701 atgataaaaatataaacattatattggaaaatggtgaaaagtgaagaatttaattttttaaaagtcaaaatattattgaattctatgtaaata 36486793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 252
Target Start/End: Complemental strand, 52895856 - 52895726
Alignment:
Q  121 agggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaa 220  Q
    ||||||||||||||||||||  |||  ||||| |||||||||||||||||| ||| |||||||||  |||| || || | |||  | |||||||||||||    
T  52895856 agggaaatgctaaagagtgtctttgg-gcatttgttaagatgataaaaatagaaacattgtattgagaaattgtgaaaagtgaaaattttaactttttaa 52895758  T
Q  221 aagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||||||| |  |||||  |||||||||||    
T  52895757 aagtcaaaacatgcttgaactcaatgtaaata 52895726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 30618079 - 30617957
Alignment:
Q  124 gaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaag 223  Q
    ||||||||||||||||  |||   ||||||||||||| |||||| ||| |||||||| ||||| ||||| | || |   |||||||||||||||||||||    
T  30618079 gaaatgctaaagagtgcccttagggcattggttaagaggataaacatagaaatattgcattgggaaatgatgaaaagcaatgaatttaactttttaaaag 30617980  T
Q  224 tcaaaactttgttgaatccaatg 246  Q
    |  |||  |||||||||||||||    
T  30617979 ttcaaatattgttgaatccaatg 30617957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 246
Target Start/End: Original strand, 41956224 - 41956314
Alignment:
Q  156 taagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||| |||||||||| ||||||   ||||||||||| | || |||||| ||||||||||||||||||||||||  |||||||| ||||||    
T  41956224 taagaggataaaaatagaaatataacattggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaagccaatg 41956314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 239
Target Start/End: Complemental strand, 51267029 - 51266939
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    |||||| ||||  |||||||||| |||||| |||||| |||||||| || | |||| ||||||||||||||||||||||||  ||||||||    
T  51267029 cattggataaggagataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 51266939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 250
Target Start/End: Complemental strand, 53484720 - 53484619
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgta 248  Q
    |||||| |||||  ||||||||| || |||||||||| ||||||| ||| || ||||||||||||||| ||||||| ||||  |||| ||||||||| ||    
T  53484720 cattggataagaaaataaaaataaaattattgtattgaaaaatgggaaaaaaagatgaatttaactttctaaaagttaaaatgttgtggaatccaatata 53484621  T
Q  249 aa 250  Q
    ||    
T  53484620 aa 53484619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 10100130 - 10100214
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||||||||||  |||| ||||||||| || | | || ||||||||||||||||||||||||  |||||||| ||||||    
T  10100130 gataaaaatataaatataatattagaaaatggtgaaaagttataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 10100214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 30475517 - 30475433
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| |||||| |||||||| || | |||| |||||||||||||||| |||||||  |||||||| ||||||    
T  30475517 gataaaaataaaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaatgtcaaaatattgttgaaaccaatg 30475433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 31755030 - 31754946
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||||||||||| | |||| |||||| | || | |||| ||||||||||||||||||||||||  |||||||| ||||||    
T  31755030 gataaaaatataaatatagaattgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatg 31754946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 32131234 - 32131150
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| ||||||||||||||| |  | |||| |||||||||||||||||||||| |  |||||||| ||||||    
T  32131234 gataaaaatagaaatatagtattggaaaatggtgataagtgataaatttaactttttaaaagtcaagatgttgttgaaaccaatg 32131150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 240
Target Start/End: Complemental strand, 33803501 - 33803386
Alignment:
Q  124 gaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaag 223  Q
    |||||| |||||| ||| ||| | | ||||||||||| || ||||||||||||||||||||| |||||  | || ||| || |||||||| |||||||||    
T  33803501 gaaatgttaaagaatgtccttaaggtattggttaagaggacaaaaatataaatattgtattgaaaaattatgaaaaataataaatttaac-ttttaaaag 33803403  T
Q  224 tcaaaactttgttgaat 240  Q
    | |||| ||||||||||    
T  33803402 ttaaaaatttgttgaat 33803386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 242
Target Start/End: Complemental strand, 27545992 - 27545874
Alignment:
Q  124 gaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttt-aaaa 222  Q
    |||||||||||||||| |||| |  ||||  |||||| |||||||||| |||||||| |||| |||||| |||| | |||||||||||||||||| ||||    
T  27545992 gaaatgctaaagagtgctcttaagacatttattaagaggataaaaatagaaatattgcattgaaaaatgataaa-agtgatgaatttaactttttgaaaa 27545894  T
Q  223 gtcaaaactttgttgaatcc 242  Q
     | ||||  |||||||||||    
T  27545893 cttaaaatattgttgaatcc 27545874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 966671 - 966590
Alignment:
Q  164 taaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||| |||||||| |||| |||||| |||| ||| |||||||||||||||||||| | ||||  |||||||||||||||    
T  966671 taaaaata-aaatattgcattgaaaaatgataaaaaattatgaatttaactttttaaaaattaaaatattgttgaatccaatg 966590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 40593731 - 40593606
Alignment:
Q  124 gaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaag 223  Q
    ||||||||||||||||  ||||  |||||| |||| | |||  ||||| |||||||||||||| |||| || || | ||||||||||||| |||||||||    
T  40593731 gaaatgctaaagagtgcccttggagcattgattaaaaagattgaaatagaaatattgtattgggaaatagtgaaaagtgatgaatttaac-ttttaaaag 40593633  T
Q  224 tcaaaactttgttgaatccaatgtaaa 250  Q
    ||| ||  ||||| ||| |||||||||    
T  40593632 tcataatgttgtttaattcaatgtaaa 40593606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 252
Target Start/End: Complemental strand, 40988317 - 40988216
Alignment:
Q  150 attggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaa 249  Q
    ||||||||| |||||||||||| ||| ||||||||| |||| | | || | ||| ||||| || ||||||||||||||||| |||||||||  |||||||    
T  40988317 attggttaaaatgataaaaataaaaacattgtattgaaaaacgatcaaaagtgaagaatt-aattttttaaaagtcaaaacgttgttgaatttaatgtaa 40988219  T
Q  250 ata 252  Q
    |||    
T  40988218 ata 40988216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 54339204 - 54339115
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||||||||||||||   |||| |||||||| || |||||| ||||||| ||||||||||||||||  || ||||| ||||||||||||    
T  54339204 gataaaaatataaatataacattgaaaaatggtgaa-aatgataaatttaattttttaaaagtcaaaatatttttgaaaccaatgtaaata 54339115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 230
Target Start/End: Original strand, 20435766 - 20435875
Alignment:
Q  121 agggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaa 220  Q
    |||||||||  |||||||  ||||||   ||||||||| | |||||||||| ||| ||||| ||||||||| || || | ||| ||||||||||||||||    
T  20435766 agggaaatgtcaaagagtactcttgaaatattggttaaaaagataaaaatagaaacattgtcttggaaaattgtgaaaagtgaagaatttaactttttaa 20435865  T
Q  221 aagtcaaaac 230  Q
    || |||||||    
T  20435866 aaatcaaaac 20435875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 23260810 - 23260729
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggt-aaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||| ||||||||||||||||| |||||||| ||||  ||||||| |||   |||||||||||||||||||||||| ||||    
T  23260810 cattgattaagatgataaaaataaaaatattgcattgagaaatggtgaaaagctgatgaatttaactttttaaaagttaaaa 23260729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 23690925 - 23691026
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgta 248  Q
    |||| |||||||||||||||| |  || |||||||||| ||| | |||  | ||| ||||||||| |||||||| ||||||| ||||||||| |||||||    
T  23690925 cattagttaagatgataaaaaaa--aacattgtattgggaaacgataagaagtgaagaatttaaccttttaaaaatcaaaacattgttgaattcaatgta 23691022  T
Q  249 aata 252  Q
    ||||    
T  23691023 aata 23691026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 23765670 - 23765586
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||  |||||| | ||||||||||||| || | |||| ||||||||||||||||| ||||||  |||||||| ||||||    
T  23765670 gataaaaattgaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatgttgttgaaaccaatg 23765586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 52021137 - 52021045
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatc 241  Q
    ||||| |||||||||||| |||| |||| ||| |||| ||||  ||||| |||||| |||||||||||||||| || ||||  ||||||||||    
T  52021137 cattgattaagatgataagaatagaaattttgcattgaaaaactgtaaaaaatgataaatttaactttttaaatgttaaaatattgttgaatc 52021045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 19328950 - 19329029
Alignment:
Q  167 aaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||| |||||| | ||||||||||||| ||   |||| ||||||||||||||||||||||||  |||||||| ||||||    
T  19328950 aaatagaaatatagcattggaaaatggtgaaatgtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatg 19329029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 33951792 - 33951709
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    |||||||||| |||||| |||||||||||| || || | |||| ||||||||||||||||| | ||||  |||||||| |||||    
T  33951792 gataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaccaat 33951709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 46823545 - 46823479
Alignment:
Q  181 tattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgt 247  Q
    |||||||||||||| || | | |||||||||||||||||||||||||||  ||||||| | ||||||    
T  46823545 tattggaaaatggtgaaaagttatgaatttaactttttaaaagtcaaaaaattgttgatttcaatgt 46823479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 15986347 - 15986274
Alignment:
Q  173 aaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||||||| |||||||| || | || ||||||||| ||||||||||||| ||  ||||||||| |||||    
T  15986347 aaatattgtattgaaaaatggtgaaaagtggtgaatttaaatttttaaaagtcagaatattgttgaattcaatg 15986274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 19876180 - 19876257
Alignment:
Q  142 cttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    ||||| ||||||| ||||  |||||||||| |||||| |||||||||||| || || | |||| ||||||||||||||    
T  19876180 cttgaagcattggataaggggataaaaatagaaatatagtattggaaaatagtgaaaagtgataaatttaacttttta 19876257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 50514618 - 50514714
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||| ||||| ||||||| || ||||||   |||| ||||||||||| | |||| ||||||||||||||||||| ||||  |||||||| ||||||    
T  50514618 cattggataagaggataaaa-tagaaatataacattgaaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatg 50514714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 31168206 - 31168138
Alignment:
Q  182 attggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaa 250  Q
    ||||||||||||| || | |||| ||||||| ||||| ||||||||||  |||||||| ||||||||||    
T  31168206 attggaaaatggtgaaaagtgataaatttaatttttttaaagtcaaaatgttgttgaaaccaatgtaaa 31168138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 2362723 - 2362637
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaa--ctttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| ||||||||||||||| || | |||| |||||||   ||||||||||||||||  ||||| || ||||||    
T  2362723 gataaaaataaaaatatagtattggaaaatggtgaaaagtgataaatttaattttttttaaaagtcaaaatgttgttaaaaccaatg 2362637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 20811355 - 20811288
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    |||||||||| ||||||   |||||||| |||| || | |||| ||||||||||||||||||||||||    
T  20811355 gataaaaatagaaatataacattggaaattggtgaaaagtgataaatttaactttttaaaagtcaaaa 20811288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 26831797 - 26831880
Alignment:
Q  156 taagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    ||||| |||||||||| ||||||  ||||| ||||||||||| | |||| |||||| |||||||||| | ||||  ||||||||    
T  26831797 taagaggataaaaatagaaatataatattgtaaaatggtaaaaagtgataaatttatctttttaaaaattaaaatgttgttgaa 26831880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 34316725 - 34316824
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgat-gaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| ||||  |||||||||||||||||   |||| ||||| || || | ||||  ||||||||||||||||||||||||  |||||||| ||||||    
T  34316725 gcattggataaggagataaaaatataaatataacattgaaaaatagtgaaaagtgataaaatttaactttttaaaagtcaaaatattgttgaaaccaatg 34316824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 44478782 - 44478715
Alignment:
Q  173 aaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaat 240  Q
    |||| |||||||||||||| || || ||| ||| |||||||||||||||||| ||||  |||||||||    
T  44478782 aaatgttgtattggaaaattgtgaaaaataatggatttaactttttaaaagtaaaaaaattgttgaat 44478715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 47188695 - 47188766
Alignment:
Q  175 atattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||| ||||||||||||||| || | |||| |||||||||| | |||||||||||  |||||||| ||||||    
T  47188695 atatagtattggaaaatggtgaaaagtgataaatttaacttctaaaaagtcaaaatgttgttgaaaccaatg 47188766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 1457538 - 1457636
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||| |||||| |||||||||| |||||||  |||| ||| |  |||| | |||| ||||||| ||||||||||| ||||  ||||||||| |||||    
T  1457538 gcattgattaagaagataaaaatagaaatattacattgaaaagtaataaaaattgataaatttaattttttaaaagttaaaatattgttgaattcaatg 1457636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 27839324 - 27839390
Alignment:
Q  163 ataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||||| |||||| | |||| |||||| | || |||||| ||||||| ||||||||||||||||    
T  27839324 ataaaaatagaaatatagcattgaaaaatgatgaaaaatgataaatttaagtttttaaaagtcaaaa 27839390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 45688872 - 45688758
Alignment:
Q  125 aaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagt 224  Q
    |||||||||  | ||||||||  | ||||| ||||  |||||||||| ||| || | |||| |||||| | || | |||| |||||||||||||||||||    
T  45688872 aaatgctaaccattgttcttggggtattggataaggggataaaaatagaaacatagcattgaaaaatgatgaaaagtgataaatttaactttttaaaagt 45688773  T
Q  225 caaaactttgttgaa 239  Q
    |||||  ||||||||    
T  45688772 caaaatgttgttgaa 45688758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 3472214 - 3472141
Alignment:
Q  163 ataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgtt 236  Q
    ||||||||| ||||||| ||||  |||||||| |  | || ||||||||||||||||||||| ||||| |||||    
T  3472214 ataaaaataaaaatattatattaaaaaatggtgacaagtgttgaatttaactttttaaaagttaaaacattgtt 3472141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 22376387 - 22376270
Alignment:
Q  121 agggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaa 220  Q
    |||||||||||||||||||  |||   |||||||||||||  || |||||| ||| | |||||||| ||||||| || | |   ||||||| ||||||||    
T  22376387 agggaaatgctaaagagtgcccttagggcattggttaagagaattaaaatagaaaaaatgtattgggaaatggtgaaaagttgcgaatttatctttttaa 22376288  T
Q  221 aagtcaaaactttgttga 238  Q
    |||| ||||  |||||||    
T  22376287 aagtaaaaaaattgttga 22376270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 55465465 - 55465541
Alignment:
Q  148 gcattggttaagatgataaa-aatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagt 224  Q
    ||||||||||||| ||| || |||| ||||||||| |||| || ||||||| ||||||||||| ||| ||||||||||    
T  55465465 gcattggttaaga-gatcaataatagaaatattgtgttgggaagtggtaaaaaatgatgaattcaacattttaaaagt 55465541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 246
Target Start/End: Complemental strand, 3769945 - 3769821
Alignment:
Q  122 gggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaa 221  Q
    |||||||| |||||||||| |||    | |||||||| | ||||||  || |||||||| |||| |||||||| || | |||| ||||| ||||||||||    
T  3769945 gggaaatgttaaagagtgtccttcgaactttggttaataggataaatttagaaatattgcattgaaaaatggtgaaaagtgataaatttgactttttaaa 3769846  T
Q  222 agtcaaaactttgttgaatccaatg 246  Q
    ||| ||||  ||||| ||| |||||    
T  3769845 agttaaaatattgttaaattcaatg 3769821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 120 - 252
Target Start/End: Complemental strand, 14331971 - 14331839
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    ||||||||||||||||||||  ||||  ||||||||||| |||||||||||| ||| |||||||||| ||||||| || ||||| |||||||||||||||    
T  14331971 aagggaaatgctaaagagtgcccttggggcattggttaaaatgataaaaatagaaacattgtattgggaaatggtgaaaaatgaagaatttaacttttta 14331872  T
Q  220 aaagtcaaaactttgttgaatccaatgtaaata 252  Q
    ||||||||||| ||||||||| |||||||||||    
T  14331871 aaagtcaaaacattgttgaattcaatgtaaata 14331839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 252
Target Start/End: Original strand, 44359644 - 44359776
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    ||||||||||||||||||||  ||||   ||||||||||||||||||||||| ||| ||||||| || ||||||| || | ||| |||||||||||||||    
T  44359644 aagggaaatgctaaagagtgcccttgggccattggttaagatgataaaaatagaaacattgtatcgggaaatggtgaaaagtgaagaatttaacttttta 44359743  T
Q  220 aaagtcaaaactttgttgaatccaatgtaaata 252  Q
    ||||||||||| ||||||||| |||||||||||    
T  44359744 aaagtcaaaacattgttgaattcaatgtaaata 44359776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 240
Target Start/End: Complemental strand, 16691423 - 16691308
Alignment:
Q  125 aaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagt 224  Q
    ||||||||| |||||  ||||  |||||||||||||||||||||||| ||| |||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  16691423 aaatgctaatgagtgcccttggggcattggttaagatgataaaaatagaaacattgtattgggaaatggtaaaaaatgaagaatttaactttttaaaagt 16691324  T
Q  225 caaaactttgttgaat 240  Q
    |||||| |||||||||    
T  16691323 caaaacattgttgaat 16691308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 121 - 252
Target Start/End: Complemental strand, 43168274 - 43168143
Alignment:
Q  121 agggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaa 220  Q
    |||||||||||||||||||  |||   |||||||||||||||||||||||| ||| |||||||||| ||||||| || | ||| || |||||||||||||    
T  43168274 agggaaatgctaaagagtgcccttagggcattggttaagatgataaaaatagaaacattgtattgggaaatggtgaaaagtgaagagtttaactttttaa 43168175  T
Q  221 aagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||||||| ||||||||| |||||||||||    
T  43168174 aagtcaaaacattgttgaattcaatgtaaata 43168143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 252
Target Start/End: Complemental strand, 48938765 - 48938638
Alignment:
Q  124 gaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaag 223  Q
    |||||||||||||||| |||| | ||||| |||||||||||||||||| |||||||||||| ||||||||| || | |||  ||||| ||||||||||||    
T  48938765 gaaatgctaaagagtgctctttaggcattagttaagatgataaaaatagaaatattgtattagaaaatggtgaaaagtgaaaaattt-actttttaaaag 48938667  T
Q  224 tcaaaactttgttgaatccaatgtaaata 252  Q
    ||||||| |||||||||  ||||||||||    
T  48938666 tcaaaacattgttgaatttaatgtaaata 48938638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 250
Target Start/End: Complemental strand, 17403080 - 17402952
Alignment:
Q  122 gggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaa 221  Q
    |||||||| ||||||| | ||||   ||||||||||||  |||||||||  ||||||||||||  ||||||||||| | |||||||||||||||||||||    
T  17403080 gggaaatgttaaagagggctcttagggcattggttaaggggataaaaattaaaatattgtattaaaaaatggtaaaaagtgatgaatttaactttttaaa 17402981  T
Q  222 agtcaaaactttgttgaatccaatgtaaa 250  Q
    ||||||||  |||||||||| ||||||||    
T  17402980 agtcaaaatattgttgaatctaatgtaaa 17402952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 252
Target Start/End: Original strand, 8892743 - 8892875
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    ||||||||||||||| | |||  |||   ||||||| ||||||||||||||| ||| || ||||||||||||||| || | | | |||||||||||||||    
T  8892743 aagggaaatgctaaacaatgtctttgggacattggtcaagatgataaaaatagaaacatcgtattggaaaatggtgaaaagtaaagaatttaacttttta 8892842  T
Q  220 aaagtcaaaactttgttgaatccaatgtaaata 252  Q
    ||||||||||| ||||| ||| |||| ||||||    
T  8892843 aaagtcaaaacattgttaaattcaatataaata 8892875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 240
Target Start/End: Original strand, 41898832 - 41898951
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    |||||||||| ||||||||||||||    | ||||||||||  ||| ||||| ||||||||||||| ||||||||||| | |||||||||||||||||||    
T  41898832 aagggaaatgttaaagagtgttcttaggacgttggttaagaa-atacaaatagaaatattgtattgaaaaatggtaaaaagtgatgaatttaacttttta 41898930  T
Q  220 aaagtcaaaactttgttgaat 240  Q
    ||||| ||||  |||||||||    
T  41898931 aaagttaaaatattgttgaat 41898951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 41147478 - 41147576
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| ||||  |||||||||| |||||| | |||| ||||||||||| |||||| ||||||||||||||||||||||||  |||||||| ||||||    
T  41147478 gcattggataaggggataaaaatagaaatatagcattgaaaaatggtaaaaaatgattaatttaactttttaaaagtcaaaatattgttgaaaccaatg 41147576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 248
Target Start/End: Original strand, 11385810 - 11385910
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgt 247  Q
    ||||||| ||||  |||||||||| |||||| ||||||||||||||| || | | || ||||||||||||||||||||||||  |||||||| |||||||    
T  11385810 gcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagttataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgt 11385909  T
Q  248 a 248  Q
    |    
T  11385910 a 11385910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 11386073 - 11385989
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| | |||||||||||||||| | |||| ||||||||||||||||||||||||  |||||||| ||||||    
T  11386073 gataaaaatagaaatatagcattggaaaatggtaaaaattgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 11385989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 49902030 - 49901934
Alignment:
Q  150 attggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||| || | |||| |||||||||||||||| || ||||| |||||||| ||||||    
T  49902030 attggataagaggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaacgttaaaacgttgttgaaaccaatg 49901934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 42607338 - 42607422
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| | |||| |||||||| || |||||| ||||||||||||||||||||||||  |||||||| ||||||    
T  42607338 gataaaaataaaaatatagcattgaaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 42607422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 51424245 - 51424161
Alignment:
Q  166 aaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaa 250  Q
    |||||| ||||||||||||| ||||| |  || | ||||||||||||||||||||| || ||||| |||||||||||||||||||    
T  51424245 aaaatagaaatattgtattgaaaaattgctaaaagtgatgaatttaactttttaaaggttaaaacattgttgaatccaatgtaaa 51424161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 224
Target Start/End: Complemental strand, 39323537 - 39323434
Alignment:
Q  121 agggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaa 220  Q
    ||||||||||||||||||||||||  | |||||||||||   | || |||| ||||||||| ||||||| ||||||| | ||||||||| ||| ||||||    
T  39323537 agggaaatgctaaagagtgttcttagtacattggttaagtgaacaataatagaaatattgtgttggaaagtggtaaaaagtgatgaattcaacattttaa 39323438  T
Q  221 aagt 224  Q
    ||||    
T  39323437 aagt 39323434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 34874673 - 34874575
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| ||||  |||||||||| |||||| | ||||||||||||| || | |||| ||||||| ||||||||||||||||  |||||||| ||||||    
T  34874673 gcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatg 34874575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 4940740 - 4940821
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||| ||||  |||||||||| |||||| | ||||||||||||| || | |||| ||||||||||||||||||||||||    
T  4940740 gcattggataaggggataaaaatagaaatatagcattggaaaatggttaaaagtgataaatttaactttttaaaagtcaaaa 4940821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 251
Target Start/End: Complemental strand, 40920292 - 40920188
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggt--aaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||||| |||||||||| |||||||| ||||  || ||||  ||||  |||| ||||||||||||||||||| ||||  |||||||||||||||    
T  40920292 cattggttaagaggataaaaatagaaatattgcattgagaagtggtgaaaagtgtgattaatttaactttttaaaagttaaaatattgttgaatccaatg 40920193  T
Q  247 taaat 251  Q
     ||||    
T  40920192 caaat 40920188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 45721858 - 45721777
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||| |||| ||||||||||| ||||||   |||||||||||||||| | |||| ||||||||||||||||| ||||||    
T  45721858 gcattggataaggtgataaaaataaaaatataacattggaaaatggtaaaaactgataaatttaactttttaaaaatcaaaa 45721777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 6170565 - 6170649
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| | |||||||||| |  || |||||| ||||||||||||||||||||||||  |||||||| ||||||    
T  6170565 gataaaaatagaaatatagcattggaaaatagagaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 6170649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 27210830 - 27210750
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||| |||||| |||||||||| || ||||||| || |||||||| || |||||| ||||||||||||||||||| ||||    
T  27210830 cattgattaagaggataaaaataaaactattgtaatgaaaaatggtgaaaaatgatcaatttaactttttaaaagttaaaa 27210750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 33930058 - 33929974
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||||||||||| | |||| ||||| || || | |||| ||||||||||||||||||||||||  |||||||| ||||||    
T  33930058 gataaaaatataaatatagcattgaaaaatagtgaaaactgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 33929974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 50154565 - 50154481
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||||||||||| | |||| |||||| |||| |||||| |||||||| |||||||||| ||||  |||||||| ||||||    
T  50154565 gataaaaatataaatatagcattgaaaaatgataaaaaatgataaatttaaccttttaaaagttaaaatgttgttgaaaccaatg 50154481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 22346252 - 22346335
Alignment:
Q  163 ataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||| |||||| |||||| |||||||| || | |||| ||||||| ||||||||||||||||  |||||||| ||||||    
T  22346252 ataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatattgttgaaaccaatg 22346335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 34644293 - 34644169
Alignment:
Q  124 gaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaag 223  Q
    |||||| |||||||||| |||    ||||| |||||| |||||||||| |||| ||||||| |||||   |||| |||||||||||| ||| ||||||||    
T  34644293 gaaatgttaaagagtgtccttaggacattgattaagaagataaaaataaaaattttgtattagaaaaa--taaaaaatgatgaatttgactatttaaaag 34644196  T
Q  224 tcaaaactttgttgaatccaatgtaaa 250  Q
    | ||||  ||||||||| |||||||||    
T  34644195 ttaaaatattgttgaattcaatgtaaa 34644169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 50295449 - 50295524
Alignment:
Q  164 taaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    |||||||| |||||| |||||||||||| || || | |||| ||||||||||||||||||||||||  ||||||||    
T  50295449 taaaaatagaaatatagtattggaaaatagtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 50295524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 40845343 - 40845261
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaa 244  Q
    |||||||||| |||||| |||||| |||||||| || | |||| ||||||||||||||||| ||||||  |||||||| ||||    
T  40845343 gataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgttgaaaccaa 40845261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 242
Target Start/End: Complemental strand, 41493042 - 41492921
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    ||||||||| ||||||||||  ||| | ||||||||||||| ||| |||||| |||||||| ||||| || |||| || | |||||||||| || |||||    
T  41493042 aagggaaattctaaagagtgcccttaaggcattggttaagaggat-aaaatagaaatattgcattgggaagtggtgaaaagtgatgaattttacatttta 41492944  T
Q  220 aaagtcaaaactttgttgaatcc 242  Q
    ||||| ||||  ||| |||||||    
T  41492943 aaagttaaaatattgatgaatcc 41492921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 49508734 - 49508831
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| ||||  |||||||||| |||||| | ||||||||||||| || | |||| ||||||||||||||||||||||||  |||| ||| ||||||    
T  49508734 gcattggataaggggataaaaatagaaatatagcattggaaaatggtgaa-agtgataaatttaactttttaaaagtcaaaatattgtcgaaaccaatg 49508831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 239
Target Start/End: Original strand, 932147 - 932248
Alignment:
Q  138 tgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttg 237  Q
    ||||||||  ||||||| ||||  |||||||||| |||||| | ||||||||||| | || ||| || ||||||| ||||||||||||||||  ||||||    
T  932147 tgttcttggggcattggataaggggataaaaatagaaatatagcattggaaaatgatgaaaaattataaatttaattttttaaaagtcaaaatgttgttg 932246  T
Q  238 aa 239  Q
    ||    
T  932247 aa 932248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 25177456 - 25177553
Alignment:
Q  155 ttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||||||||||| || | | |||||||||  |||| || || ||||| ||| |||| ||||||||||||||||| | ||||||| |||||||||||    
T  25177456 ttaagatgataaaattagatacattgtattgagaaatagtgaaaaatgaagaaattaattttttaaaagtcaaaacatcgttgaattcaatgtaaata 25177553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 28850925 - 28851013
Alignment:
Q  163 ataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    ||||||||| ||||||   ||||||||||||| || | |||| ||||||||||||||||||||||||  |||||||| |||||| |||||    
T  28850925 ataaaaatagaaatataacattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa-attgttgaaaccaatgcaaata 28851013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 52396548 - 52396468
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||| ||||  |||||||||| |||||| |||||| |||||| |||| | |||| ||||||||||||||||||||||||    
T  52396548 gcattggataaggggataaaaatagaaatatagtattgaaaaatgataaa-agtgataaatttaactttttaaaagtcaaaa 52396468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 27209735 - 27209819
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| ||||||   ||||||||||||| || | |||| ||||||||||||||||||| ||||  |||||||| ||||||    
T  27209735 gataaaaatagaaatataacattggaaaatggtgaaaattgataaatttaactttttaaaagttaaaatgttgttgaaaccaatg 27209819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 47655385 - 47655469
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| || ||| | |||| |||||||| || | |||| ||||||||||||||||||||||||  |||||||| ||||||    
T  47655385 gataaaaatagaagtatagcattgaaaaatggtgaaaattgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 47655469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 2125697 - 2125788
Alignment:
Q  138 tgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||||  ||||||| ||||  |||||||||| |||||| | |||| ||||| || || | |||| ||||||||||||||||||||||||    
T  2125697 tgttcttggggcattggataaggggataaaaatagaaatatagcattgaaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaa 2125788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 29966929 - 29966830
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaa-ctttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| ||||  ||||||||||||||||| | |||| ||||||| ||| |||||| |||||||  ||||| ||||||||||  |||||||| ||||||    
T  29966929 gcattggataaggggataaaaatataaatatagcattgaaaaatggcaaaaaatgataaatttaattttttttaaagtcaaaatattgttgaaaccaatg 29966830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 21631209 - 21631267
Alignment:
Q  124 gaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgta 182  Q
    |||||||||||||||||  |||   ||||||||||||||||||||||| ||||||||||    
T  21631209 gaaatgctaaagagtgtctttgggacattggttaagatgataaaaatagaaatattgta 21631267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 7190475 - 7190556
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||||||||| |||||||||| |||||| | |||  |||||| | || | |||| ||||||||||||||||||| ||||    
T  7190475 gcattggttaagaggataaaaatagaaatatagcattcaaaaatgatgaaaagtgataaatttaactttttaaaagttaaaa 7190556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 245
Target Start/End: Complemental strand, 43433881 - 43433784
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    ||||||| ||||  |||||||||| |||||| |||||  |||||||| || | |||| ||||||||||||||||| | ||||  |||||||| |||||    
T  43433881 gcattggataaggggataaaaatagaaatatagtattaaaaaatggtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaccaat 43433784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 46296176 - 46296221
Alignment:
Q  124 gaaatgctaaagagtgttcttgatgcattggttaagatgataaaaa 169  Q
    |||||||||||||||||||||||   ||||||||||||||||||||    
T  46296176 gaaatgctaaagagtgttcttgaaatattggttaagatgataaaaa 46296221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 24140865 - 24140781
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| ||||||  |||||||||||||| ||   |||| || |||||||||| ||||||||||  |||||||| ||||||    
T  24140865 gataaaaatagaaatatactattggaaaatggtgaaacgtgataaacttaacttttttaaagtcaaaatgttgttgaaaccaatg 24140781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 26469596 - 26469680
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| | |||| |||||  | || |||||| ||||||||||||||||||||||||  || ||||| ||||||    
T  26469596 gataaaaataaaaatatagcattgaaaaataatgaaaaatgataaatttaactttttaaaagtcaaaatattattgaaaccaatg 26469680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 32213923 - 32213987
Alignment:
Q  182 attggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||||||| || | |||| ||||||| ||||||||||||||||  |||||||| ||||||    
T  32213923 attggaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatg 32213987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 229
Target Start/End: Complemental strand, 2496144 - 2496065
Alignment:
Q  150 attggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||||||| |||| ||||| ||||||| | ||| ||||| ||||| |  |||||| |||||||||||||||| ||||    
T  2496144 attggttaagaggatacaaatagaaatattatgttgaaaaatagtaaaaatggatgaaattaactttttaaaagtaaaaa 2496065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 245
Target Start/End: Original strand, 27934996 - 27935119
Alignment:
Q  122 gggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaa 221  Q
    ||||||||||||||||||  || |  ||||||||||| | || |||  || |||| ||||||||||||||||| || ||| ||| |||| | ||||||||    
T  27934996 gggaaatgctaaagagtgccctcggggcattggttaaaaagacaaacttaaaaattttgtattggaaaatggtgaaaaataatggatttgattttttaaa 27935095  T
Q  222 agtcaaaactttgttgaatccaat 245  Q
    |||  |||  ||||||||| ||||    
T  27935096 agttcaaaaattgttgaattcaat 27935119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 42064565 - 42064502
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaa 212  Q
    |||| ||||||| ||||| ||||||||||||  ||| ||||||||| || ||||||||||||||    
T  42064565 cattagttaagaggataagaatataaatattacatttgaaaatggtgaaaaatgatgaatttaa 42064502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 28277484 - 28277573
Alignment:
Q  150 attggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    ||||| ||||| |||||||||| ||||||   |||| |||||| |||| | |||| ||||||||||||||||| | ||||  ||||||||    
T  28277484 attggataagaggataaaaatagaaatataacattgaaaaatgataaaaagtgataaatttaactttttaaaaattaaaatgttgttgaa 28277573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 4656107 - 4656031
Alignment:
Q  163 ataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    ||||||||| ||||||   |||||||||| ||||| | |||| ||||||||||||||||| | ||||  ||||||||    
T  4656107 ataaaaataaaaatataacattggaaaatagtaaaaagtgataaatttaactttttaaaaattaaaatgttgttgaa 4656031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 8414842 - 8414914
Alignment:
Q  173 aaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    |||||||||||| ||||||||| ||   |||||||||| | ||||||||||| ||||  ||||| ||||||||    
T  8414842 aaatattgtattagaaaatggtgaaatgtgatgaatttgattttttaaaagttaaaatattgttcaatccaat 8414914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 8e-33; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 27127493 - 27127612
Alignment:
Q  131 taaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaac 230  Q
    |||||||||| | |||||||||| ||||||||||||||||| |||||||||||||  ||||||| || ||||||||||||||||||||||||||||| |     
T  27127493 taaagagtgtccatgatgcattgtttaagatgataaaaatagaaatattgtattgagaaatggtgaaaaatgatgaatttaactttttaaaagtcaagat 27127592  T
Q  231 tttgttgaatccaatgtaaa 250  Q
     |||||||||||| ||||||    
T  27127593 attgttgaatccattgtaaa 27127612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 252
Target Start/End: Original strand, 12226311 - 12226438
Alignment:
Q  124 gaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaag 223  Q
    |||||||||||||||||| |||  ||||| |||||||||||||||||| ||| |||||||||  ||||| | || | ||| |||||||||||||| ||||    
T  12226311 gaaatgctaaagagtgtt-ttggggcattagttaagatgataaaaatagaaacattgtattgagaaatgattaaaagtgaagaatttaactttttgaaag 12226409  T
Q  224 tcaaaactttgttgaatccaatgtaaata 252  Q
    | ||||| ||||||||| |||||||||||    
T  12226410 taaaaacattgttgaattcaatgtaaata 12226438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 28014741 - 28014643
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||||||| | ||||| || |||||||||||||| ||||||| || |||||||| ||| ||||||||||||| ||||  |||||||||||||||    
T  28014741 gcattggttaagagggtaaaattagaaatattgtattgggaaatggtgaaaaatgatgagtttgactttttaaaagttaaaatattgttgaatccaatg 28014643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 229
Target Start/End: Complemental strand, 1947539 - 1947430
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    ||||||||||||||||||||||||||| |||||||||||||  | | ||||| ||||| | | ||||||||||||||| | || | |||| |||||| ||    
T  1947539 aagggaaatgctaaagagtgttcttgaggcattggttaagagaacataaatagaaataatttgttggaaaatggtaaaaagtgttaaattcaactttcta 1947440  T
Q  220 aaagtcaaaa 229  Q
    ||||||||||    
T  1947439 aaagtcaaaa 1947430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 29964392 - 29964303
Alignment:
Q  163 ataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    ||||||||||| | |||||||||  ||||||| || ||| |  ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  29964392 ataaaaatatagacattgtattgagaaatggtgaaaaataaataatttaactttttaaaagtcaaaacattgttgaattcaatgtaaata 29964303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 250
Target Start/End: Original strand, 14232509 - 14232596
Alignment:
Q  163 ataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaa 250  Q
    ||||||||| |||||||| |||| |||||||| || | ||||||||||| ||||| |||||||||||| |||| ||||| ||||||||    
T  14232509 ataaaaataaaaatattgaattgaaaaatggtgaaaagtgatgaatttagcttttcaaaagtcaaaacattgtcgaatctaatgtaaa 14232596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 248
Target Start/End: Original strand, 6507366 - 6507492
Alignment:
Q  122 gggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaa 221  Q
    ||||||||||||| ||||| ||||  | | |||||||||||||||||||| |||  ||| ||||| ||||  | || | |||  ||||||||||||||||    
T  6507366 gggaaatgctaaatagtgtccttggggtaatggttaagatgataaaaatagaaactttgcattgggaaatattgaaaagtgaaaaatttaactttttaaa 6507465  T
Q  222 agtcaaaactttgttgaatccaatgta 248  Q
    | ||||||| ||||||||| |||||||    
T  6507466 aatcaaaacattgttgaattcaatgta 6507492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 12775215 - 12775142
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaa 222  Q
    |||||||||||| |||||||||||||||||||||||  ||| || | || |||||| |||||||||||||||||    
T  12775215 cattggttaagaggataaaaatataaatattgtattaaaaactgatgaaaaatgattaatttaactttttaaaa 12775142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 31220302 - 31220411
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    ||||||||||||||| |||||  |||  ||||||| ||||| |||  ||||  |||||| || ||| ||||||||||| | |||||||||||||||||||    
T  31220302 aagggaaatgctaaatagtgtctttggggcattggataagaggatggaaatggaaatatcgttttgaaaaatggtaaaaagtgatgaatttaacttttta 31220401  T
Q  220 aaagtcaaaa 229  Q
    ||||| ||||    
T  31220402 aaagttaaaa 31220411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 12175651 - 12175584
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||||||||||||| |||||| |||||| |||| | |||| ||||||||||||||||||| ||||    
T  12175651 gataaaaatataaatatagtattgaaaaatgataaaaactgataaatttaactttttaaaagttaaaa 12175584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 7875201 - 7875282
Alignment:
Q  165 aaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| |||||| | ||||||||||| | || | |||| ||||||||||||||||||||||||  |||||||| ||||||    
T  7875201 aaaaatagaaatatagcattggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatg 7875282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 6867021 - 6866930
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    ||||||| ||||  |||||||||| |||||| | ||| ||||||||| || | |||| |||||||| |||||||||||||||  ||||||||    
T  6867021 gcattggataaggggataaaaataaaaatatagcatttgaaaatggtgaaaagtgataaatttaaccttttaaaagtcaaaatgttgttgaa 6866930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 12191599 - 12191508
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    ||||||| ||||  |||||||||| |||||| | ||||| ||||||| || | |||| ||||||| ||||||||||||||||  ||||||||    
T  12191599 gcattggataagtggataaaaatagaaatatagcattggtaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaa 12191508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 13000260 - 13000193
Alignment:
Q  124 gaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaat 191  Q
    |||||| ||||||| ||||||    ||||| |||||| ||||||||||||||||||||||||||||||    
T  13000260 gaaatgttaaagagcgttcttagaacattgattaagaggataaaaatataaatattgtattggaaaat 13000193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 29692358 - 29692425
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    |||||||||| |||||| |||||| |||||||| || | |||| ||||||||||||||| ||||||||    
T  29692358 gataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaagagtcaaaa 29692425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 34780038 - 34780085
Alignment:
Q  205 gaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  34780038 gaatttaactttttaaaagttaaaacattgttgaattcaatgtaaata 34780085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 10855524 - 10855447
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    |||||||||| ||||||  ||||| |||||| | || | |||| ||||||||||||||||||||||||  ||||||||    
T  10855524 gataaaaatagaaatataatattgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 10855447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 22414619 - 22414675
Alignment:
Q  173 aaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    |||||||||||| ||||||| | || || ||||| ||||||||||||||||||||||    
T  22414619 aaatattgtattagaaaatgatgaaaaaagatgattttaactttttaaaagtcaaaa 22414675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 28542062 - 28541986
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagt 224  Q
    |||||||||||||  | || |||| ||||||||| ||||||| | ||||| | ||||||||| ||||||||||||||    
T  28542062 gcattggttaagagaacaataataaaaatattgtgttggaaagtagtaaaaagtgatgaattcaactttttaaaagt 28541986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 21186059 - 21186118
Alignment:
Q  187 aaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||||| | |||||||||||||||||||||||| ||||  || ||||||| ||||    
T  21186059 aaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatattattgaatctaatg 21186118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 7880447 - 7880521
Alignment:
Q  165 aaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    ||||||| |||||| | ||| ||||||| | || | |||| ||||||||||||||||||||||||  ||||||||    
T  7880447 aaaaatagaaatatagcattagaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 7880521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 20027307 - 20027367
Alignment:
Q  178 ttgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttga 238  Q
    |||||||| |||||| |||| | ||||||||| || ||||||||||||||||  |||||||    
T  20027307 ttgtattgcaaaatgataaaaattgatgaattaaattttttaaaagtcaaaatattgttga 20027367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 34060740 - 34060867
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaa-tataaatattgtattggaaaatggtaaagaatgatgaatttaacttttt 218  Q
    |||| |||||||||||||||| |||| |||||||||||||| |||||||| || ||||||||||||| |||||||| || | ||||||||||||||||||    
T  34060740 aaggaaaatgctaaagagtgtccttggtgcattggttaagaagataaaaaataaaaatattgtattgaaaaatggtgaaaagtgatgaatttaacttttt 34060839  T
Q  219 aaaagtcaaaactttgttgaatccaatg 246  Q
    |||||| ||||  ||||||||| |||||    
T  34060840 aaaagttaaaatattgttgaattcaatg 34060867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 18763 - 18890
Alignment:
Q  121 agggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaa 220  Q
    |||||||||||||||||||  |||   ||||||||||||| |||||||||| |||||||| ||||| ||| ||| || | ||||||||||||||||||||    
T  18763 agggaaatgctaaagagtgcccttagggcattggttaagaggataaaaatagaaatattgcattgggaaacggtgaaaagtgatgaatttaactttttaa 18862  T
Q  221 aagtcaaaactttgttgaatccaatgta 248  Q
    || | ||||  |||||||||||||||||    
T  18863 aaattaaaatattgttgaatccaatgta 18890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 250
Target Start/End: Original strand, 45899518 - 45899649
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaa-tgatgaatttaacttttt 218  Q
    |||||||| | ||||||||| |||||  ||||||| |||||  ||||||||| ||||||| |||||||||||| | || || |||||||||||| |||||    
T  45899518 aagggaaacgttaaagagtgctcttggggcattggataagagaataaaaatagaaatattatattggaaaatgatgaaaaagtgatgaatttaaattttt 45899617  T
Q  219 aaaagtcaaaactttgttgaatccaatgtaaa 250  Q
    |||||||||||  ||||||||| |||||||||    
T  45899618 aaaagtcaaaatattgttgaattcaatgtaaa 45899649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 121 - 252
Target Start/End: Original strand, 51256050 - 51256180
Alignment:
Q  121 agggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaa 220  Q
    |||||||||||||||||||  |||   |||||| |||||||||||| |||||||| |||||||||| ||| | | || | ||| ||||| ||||||||||    
T  51256050 agggaaatgctaaagagtgcccttagagcattgattaagatgataacaatataaacattgtattgggaaacgatgaaaagtgaagaatt-aactttttaa 51256148  T
Q  221 aagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||||||| ||||||||| |||| ||||||    
T  51256149 aagtcaaaacattgttgaattcaatataaata 51256180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 36730156 - 36730254
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| ||||  ||||||||||||||||| |||||| |||||||| || | |||| ||||||||||||||||||||||||  |||||||| ||||||    
T  36730156 gcattggataaggggataaaaatataaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 36730254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 11675403 - 11675321
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| ||||||||||||| |||||||||||  |||| ||||||||||||||||| |||||||  |||||||||||||||    
T  11675403 gataaaaatagaaatattgtattgaaaaatggtaaa--atgacgaatttaactttttaaatgtcaaaatattgttgaatccaatg 11675321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 26850498 - 26850578
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    |||||||||| | |||||||||||||||||| |||| |||||||||||| | |||||||||||| ||||||||||| ||||    
T  26850498 cattggttaataggataaaaatataaatattatattagaaaatggtaaaaagtgatgaatttaattttttaaaagttaaaa 26850578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 29915592 - 29915676
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| |||||||||||||||||| ||| || ||||||||||||||||||||||||  | |||||| ||||||    
T  29915592 gataaaaataaaaatatagtattggaaaatggtaaaaaattataaatttaactttttaaaagtcaaaatgtggttgaaaccaatg 29915676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 29964745 - 29964829
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| |||||||||||||||||| ||| || ||||||||||||||||||||||||  | |||||| ||||||    
T  29964745 gataaaaataaaaatatagtattggaaaatggtaaaaaattataaatttaactttttaaaagtcaaaatgtggttgaaaccaatg 29964829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 156 - 252
Target Start/End: Complemental strand, 39436563 - 39436467
Alignment:
Q  156 taagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    ||||| |||||||||| ||||||||||||| |||||||| || ||| | |||||||||||||||||||||| ||| || |||||||  |||||||||    
T  39436563 taagaggataaaaatagaaatattgtattgaaaaatggtgaaaaataaagaatttaactttttaaaagtcagaacattattgaatctgatgtaaata 39436467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 51817323 - 51817406
Alignment:
Q  156 taagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    ||||| |||||||||| |||||| | ||||||||||||| || | |||| ||||||||||||||||||||||||  ||||||||    
T  51817323 taagaggataaaaataaaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 51817406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 8715520 - 8715602
Alignment:
Q  164 taaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||| |||||| | ||||||||||||| || | |||| ||||||||||||||||||||||||  |||||||| ||||||    
T  8715520 taaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 8715602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 9067407 - 9067489
Alignment:
Q  164 taaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||| |||||| | ||||||||||||| || | |||| ||||||||||||||||||||||||  |||||||| ||||||    
T  9067407 taaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 9067489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 52570872 - 52570790
Alignment:
Q  164 taaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||| |||||| ||||||||||||||| || | |||| ||| ||||||||||||||||||||  |||||||| ||||||    
T  52570872 taaaaatagaaatatagtattggaaaatggtgaaaagtgataaatataactttttaaaagtcaaaatattgttgaaaccaatg 52570790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 18946 - 19031
Alignment:
Q  163 ataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgta 248  Q
    ||||||||| |||||||| ||||| ||| ||| || | |||||||||||||||||||||| | ||||  |||||||||||||||||    
T  18946 ataaaaatagaaatattgcattgggaaacggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaatccaatgta 19031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 250
Target Start/End: Original strand, 8847456 - 8847557
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgta 248  Q
    |||||| ||||  |||||||||| ||||||   |||||||||||||||| | |||| ||||||||||||||||||| ||||  ||||||||  |||||||    
T  8847456 cattggataaggggataaaaatagaaatataacattggaaaatggtaaaaagtgattaatttaactttttaaaagttaaaatattgttgaaaacaatgta 8847555  T
Q  249 aa 250  Q
    ||    
T  8847556 aa 8847557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 46317591 - 46317494
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||| ||||  |||||||||| ||||||   ||||||||||| | || |||||| ||||||||||||||||||||||||  |||||||| ||||||    
T  46317591 cattggataagtagataaaaatagaaatataacattggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 46317494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 4759867 - 4759951
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| | |||| |||||||| || | |||| ||||||||||||||||||||||||  |||||||| ||||||    
T  4759867 gataaaaatagaaatatagcattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 4759951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 27863978 - 27864049
Alignment:
Q  121 agggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatg 192  Q
    |||||||||||||||||||  ||| | ||||||||||||| |||||||| | |||||||| |||||||||||    
T  27863978 agggaaatgctaaagagtgcccttaaggcattggttaagaggataaaaaaagaaatattgcattggaaaatg 27864049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 271175 - 271266
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    ||||||||||||||||||||||||| |       ||||||||| | |||| ||| |||||||| ||||||||||||| ||||| ||||||||||||||    
T  271175 gcattggttaagatgataaaaatattac------attggaaaacgataaaaaataatgaatttgactttttaaaagttaaaacattgttgaatccaat 271266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 15502622 - 15502720
Alignment:
Q  131 taaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    |||||||||| |||||  ||||||||||||  | ||||||| ||||| | | ||| ||||||||||| |||| |||||| |||||||||||||| ||||    
T  15502622 taaagagtgtccttgagacattggttaagagaacaaaaatagaaataatttgttgaaaaatggtaaaaaatgttgaattcaactttttaaaagttaaaa 15502720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 44695675 - 44695765
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    |||||| ||||  |||||||||||||||||  | |||||||||||| || |||||| ||||||||||||||||| | ||||  ||||||||    
T  44695675 cattggataaggggataaaaatataaatataatcttggaaaatggtgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaa 44695765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 11317047 - 11316974
Alignment:
Q  173 aaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||| |||||||||||| || | | |||||||||||||||||||||||||||  || ||||||| ||||    
T  11317047 aaatattgttttggaaaatggtgaaaagttatgaatttaactttttaaaagtcaaaatattattgaatctaatg 11316974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 241
Target Start/End: Original strand, 48313841 - 48313934
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatc 241  Q
    |||||| ||||||| ||||||||| ||| |||||||||| ||||||| || |  ||  ||||| ||||||||||| ||||||| ||||||||||    
T  48313841 gcattgattaagatcataaaaatagaaacattgtattgggaaatggtgaaaagcgaaaaatttgactttttaaaaatcaaaacattgttgaatc 48313934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 13647034 - 13647110
Alignment:
Q  143 ttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    |||| ||||| ||||||| |||||||||| |||||||| |||| ||||| || || | |||||||||||||||||||    
T  13647034 ttgaagcatttgttaagaggataaaaatagaaatattggattgaaaaatagtgaaaagtgatgaatttaacttttta 13647110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 49976145 - 49976225
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    |||| |||| || |||||||||| || ||||||||||   |||||| || | |||||||||||||||||||||||||||||    
T  49976145 catttgttaggaggataaaaatagaattattgtattgactaatggtgaaaagtgatgaatttaactttttaaaagtcaaaa 49976225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 221
Target Start/End: Complemental strand, 2310811 - 2310709
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatat-tgtattggaaaatggtaaagaatgatgaatttaacttttt 218  Q
    |||||||||| |||||||||| ||| | |||||| ||||||  || |||||| || ||  ||||||||||||||||||| | | ||||||| ||||||||    
T  2310811 aagggaaatgttaaagagtgtccttaaagcattgattaagagaattaaaatagaagtaaatgtattggaaaatggtaaaaagtcatgaattcaacttttt 2310712  T
Q  219 aaa 221  Q
    |||    
T  2310711 aaa 2310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 37509183 - 37509113
Alignment:
Q  182 attggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||||||| || || | |||| ||||||||||||||||||||||||  |||||||| |||||| |||||    
T  37509183 attggaaaatagtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaata 37509113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 4542370 - 4542454
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| || ||||||||||||  || ||| | || |||||||||||| |||||||||||||  |||  |||||||||||||||    
T  4542370 gataaaattaaaaatattgtattaaaagatgatgaaaaatgatgaatttgactttttaaaagtttaaatattgttgaatccaatg 4542454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 10854951 - 10854867
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| || |||||| | ||||||||||||| || | | || ||||||||||||||||||| ||||  |||||||| ||||||    
T  10854951 gataaaagtagaaatatagcattggaaaatggtgaaaactaataaatttaactttttaaaagttaaaatgttgttgaaaccaatg 10854867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 12905323 - 12905383
Alignment:
Q  186 gaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||| || |||||| |||||||| |||||||||||||||  |||||||| ||||||    
T  12905323 gaaaatggtgaaaaatgataaatttaacattttaaaagtcaaaatgttgttgaaaccaatg 12905383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 32415661 - 32415577
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| | |||| ||||| || || | | || ||||||||||||||||||||||||  |||||||| ||||||    
T  32415661 gataaaaatagaaatatagcattgaaaaattgtgaaaagtcataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 32415577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 39974826 - 39974906
Alignment:
Q  165 aaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    ||||||| |||||||| ||| ||||||| | |  | |||||||||||||||||||||||| ||||   |||||||||||||    
T  39974826 aaaaataaaaatattgcattagaaaatgatgagaagtgatgaatttaactttttaaaagttaaaatagtgttgaatccaat 39974906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 1803994 - 1803919
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaag 223  Q
    ||||||| ||||  |||||||||| ||||||  ||||| |||| |||||| |||||| ||||||||||| ||||||    
T  1803994 gcattggataaggggataaaaatagaaatatattattgaaaaagggtaaaaaatgataaatttaactttgtaaaag 1803919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 6822827 - 6822878
Alignment:
Q  173 aaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagt 224  Q
    ||||||||| ||||||| ||||||| | ||||||||| ||||||||||||||    
T  6822827 aaatattgtgttggaaagtggtaaaaagtgatgaattcaactttttaaaagt 6822878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 12060034 - 12060160
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    |||||||||| |||||||||   |||  | ||||||||||| || |||  || |||||||||||||||||||| | || | ||||  |||| | ||||||    
T  12060034 aagggaaatgttaaagagtgcctttggggtattggttaagaggacaaatttagaaatattgtattggaaaatgatgaaaagtgatagatttgagttttta 12060133  T
Q  220 aaagtcaaaactttgttgaatccaatg 246  Q
    ||||| ||||  ||||||||| |||||    
T  12060134 aaagttaaaaaattgttgaattcaatg 12060160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 25102339 - 25102428
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||||||| |||||| | |||||||||||||||| | |||| || |||| ||||| ||||| ||||  |||||||| |||||| |||||    
T  25102339 gataaaaatagaaatatagcattggaaaatggtaaaaagtgat-aaattaatttttttaaagttaaaatattgttgaaaccaatgcaaata 25102428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 44570423 - 44570480
Alignment:
Q  182 attggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    ||||||||||||| || | |||| | ||||||||||||||||||||||  ||||||||    
T  44570423 attggaaaatggtgaaaagtgataactttaactttttaaaagtcaaaatgttgttgaa 44570480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 12051129 - 12051053
Alignment:
Q  163 ataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    ||||||||| |||||| |||||| |||||  | || |||||| ||||||||||||||||| | ||||  ||||||||    
T  12051129 ataaaaatagaaatatagtattgtaaaataatgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaa 12051053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 7532919 - 7532796
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    |||||||||||||||||||||||||   ||||||||||||  |||||||||| |||||||||||||||||||||| || | |||||||||||  ||||||    
T  7532919 aagggaaatgctaaagagtgttcttagggcattggttaaggggataaaaatagaaatattgtattggaaaatggtgaaaagtgatgaatttaggttttta 7532820  T
Q  220 aaagtcaaaactttgttgaatccaat 245  Q
    ||||| || |  ||||||||||||||    
T  7532819 aaagttaata--ttgttgaatccaat 7532796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 252
Target Start/End: Original strand, 11295439 - 11295571
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    |||| ||||| |||||||||| ||| |  ||||||||| |||||| |||||||||| |||||||||  ||||| | || |||||||||||||||||||||    
T  11295439 aaggaaaatgttaaagagtgtccttaagacattggttacgatgatgaaaatataaacattgtattgagaaatgatgaaaaatgatgaatttaacttttta 11295538  T
Q  220 aaagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||||||||  |||||||| |||| ||||||    
T  11295539 aaagtcaaaacaatgttgaattcaatataaata 11295571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 252
Target Start/End: Original strand, 11332774 - 11332901
Alignment:
Q  125 aaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagt 224  Q
    |||||||||||||||   |||  ||||||||||||| |||||||||| |||||||||||||  |||||||  | | ||| ||||||||||||||||||||    
T  11332774 aaatgctaaagagtgccattgtggcattggttaagaagataaaaatagaaatattgtattgagaaatggtgtaaagtgaagaatttaactttttaaaagt 11332873  T
Q  225 caaaactttgttgaatccaatgtaaata 252  Q
    |||||| ||||||||| |||| ||||||    
T  11332874 caaaacattgttgaattcaatataaata 11332901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 229
Target Start/End: Original strand, 31596401 - 31596505
Alignment:
Q  125 aaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagt 224  Q
    ||||||||||||||||  |||   ||||| ||||||||||||||||| ||||||||| ||  |||||||| || |||||||||||| |||||||||||||    
T  31596401 aaatgctaaagagtgtcattgggacattgattaagatgataaaaatagaaatattgtgttaaaaaatggtgaaaaatgatgaattttactttttaaaagt 31596500  T
Q  225 caaaa 229  Q
    |||||    
T  31596501 caaaa 31596505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 245
Target Start/End: Original strand, 34421323 - 34421418
Alignment:
Q  150 attggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    |||||||||||||||||||||| ||| |||||||| | ||||||| || |||||  |||| |||||||||||| ||||||| ||||||||| ||||    
T  34421323 attggttaagatgataaaaatagaaacattgtatttggaaatggtgaaaaatgaaaaattcaactttttaaaaatcaaaacattgttgaattcaat 34421418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 229
Target Start/End: Complemental strand, 20169419 - 20169310
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    |||||| ||||||| ||||| ||||  |||| ||||||||| |||| ||||| |||||||| ||| |||||| ||||| ||| |||||||| ||||||||    
T  20169419 aagggagatgctaatgagtgctcttagtgcaatggttaagaagatacaaatagaaatattgcattagaaaattgtaaaaaattatgaatttgacttttta 20169320  T
Q  220 aaagtcaaaa 229  Q
    ||||| ||||    
T  20169319 aaagttaaaa 20169310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 38870110 - 38870006
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgt 247  Q
    |||||| ||||||||||||||||| ||| |||| ||||||||||| | || | ||| ||||| ||| |||||||||||||||  ||| ||||| ||||||    
T  38870110 gcattgattaagatgataaaaatagaaacattgcattggaaaatgatgaaaagtgaagaattcaacattttaaaagtcaaaatattgatgaattcaatgt 38870011  T
Q  248 aaata 252  Q
    |||||    
T  38870010 aaata 38870006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 24305046 - 24304944
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgta 248  Q
    ||||| ||||||||||||||||  ||||||||||||| |||| ||| || | ||| ||||||||| |||||||  |||||| |||||||||| |||||||    
T  24305046 cattgattaagatgataaaaatggaaatattgtattgaaaaacggtgaaaagtgaagaatttaac-ttttaaagatcaaaattttgttgaattcaatgta 24304948  T
Q  249 aata 252  Q
    ||||    
T  24304947 aata 24304944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 25249360 - 25249442
Alignment:
Q  164 taaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||| |||||| | ||||||||||||| || | |||| ||||||||||||||||||||||||  |||||||| ||||||    
T  25249360 taaaaataaaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatg 25249442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 19389313 - 19389394
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||| ||||  |||||||||| |||||| |||||||||||| || || | |||| ||||||||||||||||||||||||    
T  19389313 gcattggataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaa 19389394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 250
Target Start/End: Complemental strand, 26672882 - 26672794
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaa 250  Q
    |||||||||| |||||| | ||||||||||| |||| || ||| ||||||| ||||||||||||||||  |||||||| ||||| ||||    
T  26672882 gataaaaatagaaatatagcattggaaaatgataaaaaaggataaatttaattttttaaaagtcaaaatgttgttgaaaccaatataaa 26672794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 3174552 - 3174485
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    |||||||||| ||||||| |||||||||||||| || ||| || ||||| ||||||||||||||||||    
T  3174552 gataaaaatagaaatattatattggaaaatggtgaaaaattataaatttgactttttaaaagtcaaaa 3174485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 10694895 - 10694809
Alignment:
Q  166 aaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||| |||||| |||||  ||||||||||| | |||| ||||||||||||||||||||||||  ||||||||  ||||| |||||    
T  10694895 aaaataaaaatatagtatttaaaaatggtaaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaatcaatgcaaata 10694809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 26892885 - 26892811
Alignment:
Q  155 ttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    |||||| |||||||||| ||||||  ||||| ||||| ||||| |||||| ||||||||||||||||||| ||||    
T  26892885 ttaagaggataaaaatagaaatataatattgaaaaattgtaaaaaatgataaatttaactttttaaaagttaaaa 26892811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 39972127 - 39972253
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    |||| |||||||||||||||  |||   ||||||||||||| || |||  || |||| ||||||||| ||||||| || | |||||||||| ||||||||    
T  39972127 aaggaaaatgctaaagagtgcccttagggcattggttaagaagacaaatttagaaatgttgtattgggaaatggtgaaaagtgatgaatttgacttttta 39972226  T
Q  220 aaagtcaaaactttgttgaatccaatg 246  Q
    ||||| ||||  ||||| ||| |||||    
T  39972227 aaagttaaaaaattgttcaattcaatg 39972253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 4990039 - 4989958
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||| ||||  |||||||||| |||||| | |||||||||| || || |||||| |||||||||||||||| |||||||    
T  4990039 gcattggataaggggataaaaatagaaatatagcattggaaaatagtgaaaaatgataaatttaactttttaaatgtcaaaa 4989958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 18069054 - 18068977
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    |||||||||| |||||| | ||||||||||||| || | |||| |||||||||||||||| |||||||  ||||||||    
T  18069054 gataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaggtcaaaatgttgttgaa 18068977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 245
Target Start/End: Complemental strand, 4308898 - 4308818
Alignment:
Q  165 aaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    ||||||| || |||| | ||| ||||||||||| |||||||||||||||||| ||||||| ||||   |||||||||||||    
T  4308898 aaaaataaaactattatgttgaaaaatggtaaaaaatgatgaatttaactttataaaagttaaaatagtgttgaatccaat 4308818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 8018866 - 8018786
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    |||||| ||||  |||||||||| ||||||  |||||||||||||| || | |||| ||||||||||||||||| ||||||    
T  8018866 cattggataaggggataaaaatagaaatataatattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaa 8018786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 21016326 - 21016242
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| ||||||  ||||| |||||||| || | ||||  |||||||||||||||||||||||  |||||||| ||||||    
T  21016326 gataaaaatagaaatataatattgaaaaatggtgaaaagtgatagatttaactttttaaaagtcaaaatgttgttgaagccaatg 21016242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 6396278 - 6396369
Alignment:
Q  150 attggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatc 241  Q
    ||||||||||  |||| ||||| ||||||||| ||| |||||||| |||| | ||||||||||| ||||||| || ||||  ||||||||||    
T  6396278 attggttaagtggatataaataaaaatattgtgttgtaaaatggtgaagagtaatgaatttaacattttaaacgttaaaatgttgttgaatc 6396369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 8210238 - 8210175
Alignment:
Q  166 aaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||||||||||||| | |||| |||| || ||||||||||| |||||||||||||| ||||    
T  8210238 aaaatataaatattgtagttgaaagtggtgaaaaatgatgaattcaactttttaaaagttaaaa 8210175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 30351673 - 30351599
Alignment:
Q  173 aaatattgtattggaaaatggtaaagaa-tgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||| |||| ||||||||||| || ||| || ||||||||||||||||| ||||  |||||||||||||||    
T  30351673 aaatattgcattgaaaaatggtaaaaaagtgacgagtttaactttttaaaagttaaaatattgttgaatccaatg 30351599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 35930242 - 35930168
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaa 222  Q
    ||||||| ||||| |||||||||| |||||| |||||| |||||| | || ||| || |||||||||||||||||    
T  35930242 gcattggataagaagataaaaataaaaatatagtattgaaaaatgatgaaaaataataaatttaactttttaaaa 35930168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 6841706 - 6841779
Alignment:
Q  155 ttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaa 228  Q
    |||||| |||||||||| |||||||||||| ||||||| | || | ||||| || ||||||||||||| |||||    
T  6841706 ttaagaggataaaaatagaaatattgtattagaaaatgatgaaaagtgatgtatataactttttaaaaatcaaa 6841779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 28280551 - 28280474
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaa 197  Q
    |||| |||||||||| | ||  ||| ||||||||| |||||  ||||||||||||||||||| |||||||||| ||||    
T  28280551 aaggaaaatgctaaaaaatgcccttaatgcattggataagagaataaaaatataaatattgtgttggaaaatgataaa 28280474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 45338110 - 45338029
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||| ||||  |||||||||| ||||||   |||| |||||||| || |||||| ||||||||||||||||| ||||||    
T  45338110 gcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaaatgataaatttaactttttaaaaatcaaaa 45338029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 6939250 - 6939166
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| ||||||   |||| |||||||| |  | |||| ||||||||||||||||||||||||  |||||||| ||||||    
T  6939250 gataaaaatagaaatataacattgaaaaatggtgacaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 6939166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 21016074 - 21016158
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| ||||||   |||| |||||||| || | ||||  |||||||||||||||||||||||  |||||||| ||||||    
T  21016074 gataaaaatagaaatataacattgaaaaatggttaaaagtgatagatttaactttttaaaagtcaaaatgttgttgaagccaatg 21016158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 245
Target Start/End: Original strand, 25381672 - 25381767
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    |||||||||||| |||||||||| ||||||| |||| |||||| | ||| |||||| ||||| | ||||| ||||| ||||  |||||| |||||||    
T  25381672 cattggttaagaagataaaaataaaaatattatatt-gaaaatagaaaaaaatgattaattttatttttttaaagttaaaatattgttgtatccaat 25381767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 6433635 - 6433552
Alignment:
Q  163 ataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||| |||||| | |||| ||||||||||| | | || ||||||||||||||||||| ||||  ||||| || ||||||    
T  6433635 ataaaaataaaaatatagcattgaaaaatggtaaaaagttataaatttaactttttaaaagttaaaatattgttaaaaccaatg 6433552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 26195390 - 26195473
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    |||||||||| ||||||   |||||||||| || || | |||| ||||||||||||||||||| ||||  |||||||| |||||    
T  26195390 gataaaaatagaaatataacattggaaaattgtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaat 26195473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 13284204 - 13284143
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaattt 210  Q
    ||||| |||||| ||| |||||||||||||||||||   |||| ||||| ||||||||||||    
T  13284204 cattgattaagaggattaaaatataaatattgtattaacaaatagtaaaaaatgatgaattt 13284143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 20212445 - 20212494
Alignment:
Q  201 tgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaa 250  Q
    |||||||||||| ||||||||||| ||||  | |||||||||||||||||    
T  20212445 tgatgaatttaagtttttaaaagttaaaatatcgttgaatccaatgtaaa 20212494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 252
Target Start/End: Original strand, 33741528 - 33741581
Alignment:
Q  199 aatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||| ||||||||||||||||||| ||||  |||||||| |||||| |||||    
T  33741528 aatgataaatttaactttttaaaagttaaaatattgttgaaaccaatgcaaata 33741581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 44874436 - 44874355
Alignment:
Q  143 ttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagt 224  Q
    |||| ||||||| ||||  |||||||||||||||||   |||| |||||||| || | |||| ||||||| |||||||||||    
T  44874436 ttgaagcattggataaggggataaaaatataaatataacattgaaaaatggtgaaaagtgataaatttaaatttttaaaagt 44874355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 25636694 - 25636773
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    |||||| ||||| |||||||||| ||||||||||||  ||||| | ||| |||||| ||||| | ||||| ||||||||||    
T  25636694 cattggataagaggataaaaatagaaatattgtatt-aaaaatagaaaaaaatgattaattttatttttttaaagtcaaaa 25636773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 36766621 - 36766705
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgat 204  Q
    |||||||||||||||||||| ||||   | |||| |||||| ||||||  || |||| |||||||| |||||| |||| ||||||    
T  36766621 aagggaaatgctaaagagtgctcttagggtattgattaagaggataaatttagaaatgttgtattgaaaaatgataaaaaatgat 36766705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 245
Target Start/End: Complemental strand, 39335602 - 39335482
Alignment:
Q  125 aaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagt 224  Q
    |||||||||||| ||  |||||||||||| |||||| |||| |||||||||| |||| ||  ||||| ||||| | ||||||||||||||||||||||||    
T  39335602 aaatgctaaagaatgcccttgatgcattgattaagaggatacaaatataaattttgtgttcaaaaatagtaaaaagtgatgaatttaactttttaaaagt 39335503  T
Q  225 caaaactttgttgaatccaat 245  Q
    |||||  ||||||||||||||    
T  39335502 caaaatgttgttgaatccaat 39335482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 252
Target Start/End: Original strand, 4293811 - 4293938
Alignment:
Q  125 aaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagt 224  Q
    ||||| ||||||||||||||   ||||||||||| | ||||||||||  ||||||||||||  ||||| |||||| |  |||||||||||||||||||||    
T  4293811 aaatgttaaagagtgttcttagggcattggttaaaaggataaaaatagtaatattgtattgagaaatgataaagagtagtgaatttaactttttaaaagt 4293910  T
Q  225 caaaactttgttgaatccaatgtaaata 252  Q
    |||||  || ||||||||||| ||||||    
T  4293911 caaaagattattgaatccaatataaata 4293938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 240
Target Start/End: Original strand, 39069256 - 39069371
Alignment:
Q  123 ggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaa 222  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||||  ||  || ||||||||||||||| || || | ||||||||||||| ||||||||    
T  39069256 ggaaatgttaaagagtgtccttgaggcattggttaagatgataaa--taggaacattgtattggaaaattgtgaaaagtgatgaatttaacattttaaaa 39069353  T
Q  223 gtcaaaactttgttgaat 240  Q
    |||||||  |||||||||    
T  39069354 gtcaaaatattgttgaat 39069371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 250
Target Start/End: Complemental strand, 678582 - 678454
Alignment:
Q  122 gggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaa 221  Q
    |||||||||| |||||||  ||| | ||||||||||||| || ||||||| || | ||||||||||||||||| || | | ||||||||||| |||||||    
T  678582 gggaaatgctgaagagtgcccttaaagcattggttaagaggacaaaaatagaattgttgtattggaaaatggtgaaaagtaatgaatttaaccttttaaa 678483  T
Q  222 agtcaaaactttgttgaatccaatgtaaa 250  Q
    ||| ||||  |||||||||||| ||||||    
T  678482 agttaaaaaattgttgaatccattgtaaa 678454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 38610299 - 38610387
Alignment:
Q  152 tggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaat 240  Q
    |||||||||||||||||||| ||| |||| |||| |||||| |||| | ||| |||||||||||||||||||||||||| |||||||||    
T  38610299 tggttaagatgataaaaatagaaacattgcattgaaaaatgataaaaagtgaagaatttaactttttaaaagtcaaaacattgttgaat 38610387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 121 - 252
Target Start/End: Complemental strand, 39167728 - 39167598
Alignment:
Q  121 agggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaa 220  Q
    |||||||||||||| ||||  ||||   |||| |||||||||||||||||| ||| |||||||||||||||||| || ||  |  |||||||||||||||    
T  39167728 agggaaatgctaaatagtgcccttggaacattagttaagatgataaaaatagaaacattgtattggaaaatggtgaa-aagtaaaaatttaactttttaa 39167630  T
Q  221 aagtcaaaactttgttgaatccaatgtaaata 252  Q
    || ||||||| ||||| ||| |||||||||||    
T  39167629 aaatcaaaacattgttaaattcaatgtaaata 39167598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 242
Target Start/End: Original strand, 3015030 - 3015147
Alignment:
Q  125 aaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagt 224  Q
    |||||||||||||||  ||| | ||||  |||||||||||||||||| ||||||||| || |||||| ||  | |||||| |||||||||||||||||||    
T  3015030 aaatgctaaagagtgcccttaaagcatctgttaagatgataaaaatagaaatattgtgttagaaaatagtgtaaaatgattaatttaactttttaaaagt 3015129  T
Q  225 caaaactttgttgaatcc 242  Q
     ||||  |||||||||||    
T  3015130 taaaatattgttgaatcc 3015147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 17168808 - 17168708
Alignment:
Q  122 gggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaa 221  Q
    ||||||||||||||||||  ||| | ||||||||||||| |||| ||||| |||||||| |||| |||| ||| || |||||||||||| ||||||||||    
T  17168808 gggaaatgctaaagagtgcacttaaggcattggttaagaagatacaaatagaaatattgcattgaaaaacggtgaaaaatgatgaatttgactttttaaa 17168709  T
Q  222 a 222  Q
    |    
T  17168708 a 17168708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 39567995 - 39567911
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||||||||||| | ||||||||||| | || |||||| ||||||||||||||||| ||||||| |||||||| ||||||    
T  39567995 gataaaaatataaatatagcattggaaaatgatgaaaaatgataaatttaactttttaaaaatcaaaacattgttgaaaccaatg 39567911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 8410234 - 8410167
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    |||||||||| |||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  8410234 gataaaaataaaaatatagtattagaaaatggtaaaaaatgataaatttaactttttaaaagtcaaaa 8410167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 27535230 - 27535105
Alignment:
Q  120 aagggaaatgctaaa-gagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaa-tttaactttt 217  Q
    |||||||||| |||| ||||||| |||| ||||||  ||| | |||||||||||||||||||||||| |||||||| || | ||||||| ||||| ||||    
T  27535230 aagggaaatgttaaaagagtgttattgaggcattgaataaaaggataaaaatataaatattgtattgaaaaatggtgaaaagtgatgaattttaagtttt 27535131  T
Q  218 taaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| ||||   ||||||||||||||    
T  27535130 taaaagttaaaa---tgttgaatccaatg 27535105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 43414081 - 43414165
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| | ||||||||||||| || |||||| ||||||||||||||||| ||||||  |||||||| ||||||    
T  43414081 gataaaaatagaaatatagcattggaaaatggtgaaaaatgatcaatttaactttttaaaaatcaaaatgttgttgaaaccaatg 43414165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 1759923 - 1759820
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgt 247  Q
    ||||||| ||||| |||||||||| |||||| |||||| |||||||  || | |||| ||||||||||||||||||||||||  ||||| || ||||||     
T  1759923 gcattggataagaggataaaaatagaaatatagtattgaaaaatggagaaaagtgataaatttaactttttaaaagtcaaaatgttgttaaaaccaatgc 1759824  T
Q  248 aaat 251  Q
    ||||    
T  1759823 aaat 1759820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 25017288 - 25017375
Alignment:
Q  142 cttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||| ||||||| ||||  |||||||||| |||||| |||||||||||| || || | |||| ||||||||||||||||||||||||    
T  25017288 cttgaggcattggataaggggataaaaatagaaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaa 25017375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 12068192 - 12068258
Alignment:
Q  163 ataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||||| |||||| ||||||||||||||| || | |||| ||||||||||||||||||||||||    
T  12068192 ataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 12068258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 246
Target Start/End: Original strand, 35653252 - 35653356
Alignment:
Q  142 cttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatc 241  Q
    |||| |||||||| ||||  |||||||||| |||||| | ||||||||||||| || | |||| ||||||||||||| ||| ||||||  |||||||| |    
T  35653252 cttggtgcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttgaaaatcaaaatgttgttgaaac 35653351  T
Q  242 caatg 246  Q
    |||||    
T  35653352 caatg 35653356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 4421967 - 4422058
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    ||||||| ||||| |||||||||| |||||| | ||||||||||||| || | |||| |||||||||||||| || ||||||  ||||||||    
T  4421967 gcattggataagaggataaaaatagaaatatagcattggaaaatggtgaaaagtgataaatttaactttttacaaatcaaaatgttgttgaa 4422058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 252
Target Start/End: Original strand, 10163623 - 10163733
Alignment:
Q  142 cttgatgcattggttaagatgataaaaatataaatattgtattggaaaatgg-taaagaatgatgaatttaactttttaaaagtcaaaactttgttgaat 240  Q
    ||||| |||||||||||||||||||||||| ||| || |||||| |||| || | || | ||| |||||||||||||||||||||||||  ||| |||||    
T  10163623 cttgaagcattggttaagatgataaaaataaaaacat-gtattgaaaaaagggtgaaaagtgaagaatttaactttttaaaagtcaaaatattgctgaat 10163721  T
Q  241 ccaatgtaaata 252  Q
     |||| ||||||    
T  10163722 tcaatataaata 10163733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 224
Target Start/End: Complemental strand, 38508134 - 38508035
Alignment:
Q  125 aaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagt 224  Q
    |||||||||||| ||| |||   ||||||  ||||| ||||||||||||||||||| |||||||||| ||  | ||| ||||||||||| ||||||||||    
T  38508134 aaatgctaaagaatgtccttagcgcattgaataagaagataaaaatataaatattgcattggaaaatagtgcaaaataatgaatttaacattttaaaagt 38508035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 251
Target Start/End: Original strand, 3241957 - 3242059
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgta 248  Q
    ||||| |||||| |||||||||| |||||||| ||||| || | || || | ||||||||| |||||||||||||| ||||  ||||||||| ||||| |    
T  3241957 cattgattaagacgataaaaataaaaatattgcattgggaagtagtgaaaattgatgaattaaactttttaaaagttaaaatattgttgaattcaatgaa 3242056  T
Q  249 aat 251  Q
    |||    
T  3242057 aat 3242059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 222
Target Start/End: Complemental strand, 27823365 - 27823291
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaa 222  Q
    ||||||| ||||  |||||||||| |||||| ||||||||||||||| || | |||| |||||||||||||||||    
T  27823365 gcattggataaggggataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaaa 27823291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 5151581 - 5151504
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    |||||||||| ||||||   ||||||||||| | || |||||| ||||||||||||||||||||||||  ||||||||    
T  5151581 gataaaaatagaaatataacattggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaa 5151504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 245
Target Start/End: Complemental strand, 19894907 - 19894827
Alignment:
Q  165 aaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    ||||||| |||||||| |||  |||||||| ||  ||||||||||||||||||||||||| ||||  ||||| ||||||||    
T  19894907 aaaaatagaaatattgcattaaaaaatggttaaatatgatgaatttaactttttaaaagttaaaatattgttaaatccaat 19894827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 3639092 - 3639158
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaa 228  Q
    |||||||||| ||||||   ||||||||||||| |||| |||| ||||||| |||||||||||||||    
T  3639092 gataaaaatagaaatataacattggaaaatggtgaagagtgataaatttaattttttaaaagtcaaa 3639158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 28599677 - 28599755
Alignment:
Q  168 aatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||| ||||||| ||||||||||| || || |||||| ||||| ||||||||||||| |||| ||| |||||| |||||    
T  28599677 aataaaaatattatattggaaaatagtgaaaaatgataaatttgactttttaaaagttaaaaatttattgaattcaatg 28599755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 338781 - 338858
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    |||||||||| ||||||  ||||| |||||| |||| | |||| ||||||||||||||||| ||||||  ||||||||    
T  338781 gataaaaataaaaatatgatattgaaaaatgataaaaagtgataaatttaactttttaaaaatcaaaatattgttgaa 338858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 37243939 - 37243862
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    |||||||||| ||||||  |||||||||||||| || | |||| ||||||||||||||||| | ||||  ||||||||    
T  37243939 gataaaaataaaaatataatattggaaaatggtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaa 37243862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 8454525 - 8454596
Alignment:
Q  150 attggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaa 221  Q
    |||| |||||| |||||||||| ||||||| |||| ||| ||| |||| | ||||| |||||||||||||||    
T  8454525 attgattaagaagataaaaataaaaatattatattagaagatgataaaaagtgatggatttaactttttaaa 8454596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 20184570 - 20184644
Alignment:
Q  167 aaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatc 241  Q
    ||||| |||||||| ||||  ||| ||| || | |||||||||| ||||||||||||| ||||| ||||||||||    
T  20184570 aaatagaaatattgcattgagaaacggtgaaaagtgatgaatttcactttttaaaagttaaaacattgttgaatc 20184644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 1479131 - 1479220
Alignment:
Q  140 ttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||| ||||||  ||||  |||||||||| |||||| | |||| |||||  | || | |||| ||||||||||||||||||||||||    
T  1479131 ttcttgaggcattgaataaggggataaaaatagaaatatagcattgaaaaataatgaaaagtgataaatttaactttttaaaagtcaaaa 1479220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 6823762 - 6823859
Alignment:
Q  155 ttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaa-tttaactttttaaaagtcaaaactttgttgaatccaatgtaaat 251  Q
    ||||||| || |||||| ||||||||||| |||||| |||  | | | || || ||||||||||||||||| ||||  ||||||||||||||| ||||    
T  6823762 ttaagattatgaaaatagaaatattgtatcggaaaacggtggaaagtaataaattttaactttttaaaagttaaaatattgttgaatccaatgcaaat 6823859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 16315551 - 16315633
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| | ||||||||||||| || | |||| ||  ||||||||||| ||||||||  |||||||| ||||||    
T  16315551 gataaaaatagaaatatagcattggaaaatggtgaaaagtgataaa--taactttttaatagtcaaaatgttgttgaaaccaatg 16315633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 245
Target Start/End: Original strand, 16899635 - 16899672
Alignment:
Q  208 tttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  16899635 tttaactttttaaaagtcaaaatgttgttgaatccaat 16899672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 28143140 - 28143217
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    |||||||||| ||||||   ||||| ||||||| || ||| || ||||||||||||||||| ||||||  ||||||||    
T  28143140 gataaaaatagaaatataacattgggaaatggtgaaaaataataaatttaactttttaaaaatcaaaatgttgttgaa 28143217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 4962534 - 4962610
Alignment:
Q  163 ataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    ||||||||| ||||||   ||||||||||| | || | |||| ||||||||||||| ||||||||||  ||||||||    
T  4962534 ataaaaatagaaatataacattggaaaatgatgaaaagtgataaatttaacttttttaaagtcaaaatgttgttgaa 4962610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 25568309 - 25568393
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||||||||||| | |||| |||||| | || | ||||  |||||||||||||||| ||||||  || ||||| ||||||    
T  25568309 gataaaaatataaatatagcattgaaaaatgatgaaaagtgatacatttaactttttaaaaatcaaaatgttattgaaaccaatg 25568393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 5e-25; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 121 - 252
Target Start/End: Original strand, 12695212 - 12695345
Alignment:
Q  121 agggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatg--gtaaagaatgatgaatttaacttttt 218  Q
    |||||||||||||||||    ||||  |||||||||||||||||||||||| ||| ||||||||||||||||  || || | | | ||||||||||||||    
T  12695212 agggaaatgctaaagagcacccttggagcattggttaagatgataaaaatagaaacattgtattggaaaatggtgtgaaaagtaaagaatttaacttttt 12695311  T
Q  219 aaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||| ||||||| ||||||||| |||||||||||    
T  12695312 aaaaatcaaaacattgttgaattcaatgtaaata 12695345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 2239687 - 2239591
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    |||||||||||| |||||| ||| |||||||| | || ||||||||||| |||||||||||||||||||||||||| ||||  ||||||||||||||    
T  2239687 cattggttaagaggataaagatagaaatattgcaatgaaaaatggtaaaaaatgatgaatttaactttttaaaagttaaaatattgttgaatccaat 2239591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 252
Target Start/End: Complemental strand, 11659393 - 11659264
Alignment:
Q  123 ggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaa 222  Q
    ||||||| |||||||||  ||||  ||||| ||||||| |||||||||| ||||||||||||| ||||| || || | ||| ||||||||||||||||||    
T  11659393 ggaaatgttaaagagtgcccttggagcattcgttaagaggataaaaataaaaatattgtattgaaaaatagtgaaaagtgaagaatttaactttttaaaa 11659294  T
Q  223 gtcaaaactttgttgaatccaatgtaaata 252  Q
     | ||||  ||||||||| |||||||||||    
T  11659293 attaaaatattgttgaattcaatgtaaata 11659264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 6999294 - 6999210
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| ||||||||||||||| || |||||| ||||||||||||||||||||||||  |||||||| ||||||    
T  6999294 gataaaaatagaaatatagtattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 6999210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 249
Target Start/End: Original strand, 40798330 - 40798427
Alignment:
Q  150 attggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaa 249  Q
    |||||| ||||||||||||||| ||| ||||||||||||||| | ||||  ||| | |||||||||||||||||||||||| ||||||||| ||||||||    
T  40798330 attggtaaagatgataaaaatagaaacattgtattggaaaattgaaaag--tgaaggatttaactttttaaaagtcaaaacattgttgaattcaatgtaa 40798427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 241
Target Start/End: Complemental strand, 2805516 - 2805394
Alignment:
Q  121 agggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaact--tttt 218  Q
    ||||||||| |||||||||| ||  |  |||||||||||| ||||||||||||| |||||||||| |||||  | || | ||||||||||||||  ||||    
T  2805516 agggaaatgttaaagagtgtcctgaagacattggttaagaggataaaaatataagtattgtattgaaaaataattaaaagtgatgaatttaacttttttt 2805417  T
Q  219 aaaagtcaaaactttgttgaatc 241  Q
    |||||||||||  ||||||||||    
T  2805416 aaaagtcaaaatattgttgaatc 2805394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 34334167 - 34334261
Alignment:
Q  151 ttggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    |||| |||||||||||||||| |||||||||||| |||||||||||| |||||  |||| ||||||||| || | ||||  ||||||||||||||    
T  34334167 ttggataagatgataaaaatagaaatattgtatttgaaaatggtaaaaaatgacaaattaaactttttacaaattaaaatattgttgaatccaat 34334261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 862681 - 862597
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| ||||||||||||||| || | |||| ||||||||||||||| ||||||||  |||||||| ||||||    
T  862681 gataaaaatagaaatatagtattggaaaatggtgaaaagtgataaatttaactttttaagagtcaaaatcttgttgaaaccaatg 862597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 1321274 - 1321172
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgt 247  Q
    ||||||| ||||| |||||||||| ||||||   |||||||||||||||| ||| || ||||||||| ||||||| ||||||  ||||||||  ||||||    
T  1321274 gcattggataagaggataaaaatagaaatataacattggaaaatggtaaaaaataataaatttaactctttaaaaatcaaaatgttgttgaaatcaatgt 1321175  T
Q  248 aaa 250  Q
    |||    
T  1321174 aaa 1321172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 34392552 - 34392655
Alignment:
Q  146 atgcattggttaagatgataaaaatataaatattgta-ttggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaa 244  Q
    |||||||| |||||| |||||||||| ||  |||||| |||||||||||| || ||||| |||||||| ||||||||||||||||    ||||||| |||    
T  34392552 atgcattgattaagaagataaaaatagaatcattgtaattggaaaatggttaaaaatgaagaatttaattttttaaaagtcaaaa----gttgaattcaa 34392647  T
Q  245 tgtaaata 252  Q
    ||||||||    
T  34392648 tgtaaata 34392655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 229
Target Start/End: Original strand, 2209895 - 2210000
Alignment:
Q  124 gaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaag 223  Q
    |||||| ||||||||| |||||   ||||||||||||  || |||||| ||| | ||||||||||||||||||| | | ||||||| ||||||| |||||    
T  2209895 gaaatgttaaagagtgctcttgggacattggttaagagaattaaaataaaaaaaatgtattggaaaatggtaaaaagttatgaattcaacttttgaaaag 2209994  T
Q  224 tcaaaa 229  Q
    ||||||    
T  2209995 tcaaaa 2210000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 240
Target Start/End: Complemental strand, 33849120 - 33849000
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    |||| ||||| |||||||| || || |  ||||| ||||||||||||||||| ||| ||| |||||  ||||||| || ||  | |||||||||||||||    
T  33849120 aaggaaaatgttaaagagtattttttagacattgattaagatgataaaaatagaaacattatattgataaatggtgaaaaaccaagaatttaacttttta 33849021  T
Q  220 aaagtcaaaactttgttgaat 240  Q
    ||||||||| | |||||||||    
T  33849020 aaagtcaaaccattgttgaat 33849000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 252
Target Start/End: Complemental strand, 33864453 - 33864357
Alignment:
Q  156 taagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    ||||| |||||||||| |||||| | ||||||||||||| || | | || |||||||| |||||||||||||||  |||||||| |||||| |||||    
T  33864453 taagaggataaaaataaaaatatcgcattggaaaatggtgaaaagtaataaatttaacattttaaaagtcaaaatattgttgaaaccaatgcaaata 33864357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 2966645 - 2966542
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgta 248  Q
    |||||| ||||  |||||||||| ||||||   ||||||||||||| || | |||| ||||||| ||||||||||||||||  |||||||| |||||| |    
T  2966645 cattggataaggggataaaaatagaaatataacattggaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatgca 2966546  T
Q  249 aata 252  Q
    ||||    
T  2966545 aata 2966542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 17603903 - 17603836
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    |||||||||| |||||| | |||| |||||| |||| |||||| ||||||||||||||||||||||||    
T  17603903 gataaaaatagaaatatagcattgaaaaatgataaaaaatgataaatttaactttttaaaagtcaaaa 17603836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 34220621 - 34220740
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    |||||||||| ||||| |||  ||| |  |||||||||||| |||||||||| |||| ||| ||||| || |||| || | |||||||||||| ||||||    
T  34220621 aagggaaatgttaaagtgtgcccttaagacattggttaagaggataaaaatagaaatcttgcattgggaagtggtgaaaagtgatgaatttaagttttta 34220720  T
Q  220 aaagtcaaaactttgttgaa 239  Q
    ||||| ||||  ||||||||    
T  34220721 aaagttaaaatattgttgaa 34220740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 765153 - 765251
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| ||||  |||||||||| ||||||   |||||||||| || || | |||| ||||||||||||||||||||||||  |||||||| ||||||    
T  765153 gcattggataaggggataaaaatagaaatataacattggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 765251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 39085809 - 39085886
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    |||||||||| ||||||   ||||||||||| |||| | |||| ||||||||||||||||||||||||  ||||||||    
T  39085809 gataaaaatagaaatataacattggaaaatgataaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 39085886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 39401538 - 39401634
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    ||||||| ||||  |||||||||| ||||||   |||| |||||||| || | |||| |||||||||||||||||||||||| ||||||||| |||||    
T  39401538 gcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgat-aatttaactttttaaaagtcaaaattttgttgaaaccaat 39401634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 249
Target Start/End: Original strand, 44299684 - 44299785
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgt 247  Q
    ||||||| ||||| |||||||||| |||||| |  | | |||||||| || | |||| |||||||| |||||||||||||||  |||||||| |||||||    
T  44299684 gcattgggtaagaggataaaaatagaaatatagcctcgaaaaatggtgaaaagtgataaatttaacattttaaaagtcaaaatattgttgaaaccaatgt 44299783  T
Q  248 aa 249  Q
    ||    
T  44299784 aa 44299785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 30831723 - 30831643
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    |||||||||| |  ||||||||| |||||||| |||  |||||  |||| |||||||||||||||||||||||||| ||||    
T  30831723 cattggttaacaaaataaaaatagaaatattgcattaaaaaattataaaaaatgatgaatttaactttttaaaagtaaaaa 30831643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 41436570 - 41436486
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| |||||| |||||| | || | |||| || |||||||||||||||||||||  |||||||| ||||||    
T  41436570 gataaaaataaaaatatagtattgaaaaatgatgaaaagtgataaacttaactttttaaaagtcaaaatgttgttgaaaccaatg 41436486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 16361657 - 16361574
Alignment:
Q  163 ataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||| ||||||   |||||||||||||||| | |||| ||||||||||| ||||||||||||  |||| ||| ||||||    
T  16361657 ataaaaatagaaatataacattggaaaatggtaaaaattgataaatttaactttataaaagtcaaaatgttgtcgaaaccaatg 16361574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 33726486 - 33726395
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    ||||||| ||||  |||||||||| |||||| |||||| |||||||| || ||| || ||||||||||| ||||||| ||||  ||||||||    
T  33726486 gcattggataaggggataaaaataaaaatatagtattgaaaaatggtgaaaaataataaatttaactttctaaaagttaaaatattgttgaa 33726395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 29260107 - 29260229
Alignment:
Q  124 gaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaag 223  Q
    ||||||||||||||||| ||| |  |||| ||||||| || |||| || |||| ||||| ||||||||||| || | ||||  |||| |||||| |||||    
T  29260107 gaaatgctaaagagtgtccttaagacatttgttaagaagacaaaattagaaatgttgtactggaaaatggtgaaaagtgatagatttgacttttaaaaag 29260206  T
Q  224 tcaaaactttgttgaatccaatg 246  Q
    | ||||  ||||||||| |||||    
T  29260207 ttaaaaaattgttgaattcaatg 29260229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 17095108 - 17095173
Alignment:
Q  187 aaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||||| || | |||| ||||||||||||||||||||||||  |||||||| |||||| |||||    
T  17095108 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaata 17095173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 35445307 - 35445391
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttt-aaaagtcaaaactttgttgaatccaat 245  Q
    |||||||||||||||||   |||| |||||||| || | |||| ||||||||||||| |||||||||||  |||||||| |||||    
T  35445307 gataaaaatataaatataacattgaaaaatggtgaaaagtgataaatttaactttttcaaaagtcaaaatattgttgaaaccaat 35445391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 37230349 - 37230253
Alignment:
Q  125 aaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaa 221  Q
    ||||| ||||||||||  || | ||||||||||| |  |||| |||| ||||||||||||| |||||||| || | |||| || |||||||||||||    
T  37230349 aaatgttaaagagtgtcattaaggcattggttaatagcataagaatagaaatattgtattgaaaaatggtgaaaagtgataaacttaactttttaaa 37230253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 246
Target Start/End: Original strand, 747498 - 747592
Alignment:
Q  152 tggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||| || |||  || |||| |||||||||||||| || || | ||||  |||||||||||||||||| ||||  ||||||||| |||||    
T  747498 tggttaagaggacaaacttagaaatgttgtattggaaaatagtgaaaagtgatagatttaactttttaaaagttaaaaaattgttgaattcaatg 747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 10900267 - 10900357
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||||||| ||||||   |||| |||||| |||| | |||||||||| | ||||||||||| ||||  || |||||| |||||||||||    
T  10900267 gataaaaatagaaatatcacattgaaaaatgataaaaagtgatgaattttattttttaaaagttaaaatattattgaattcaatgtaaata 10900357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 17118390 - 17118456
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaa 228  Q
    |||||||||| ||||||  || ||||||||| | || |||||| ||||||||||||||||| |||||    
T  17118390 gataaaaatagaaatataatactggaaaatgttgaaaaatgataaatttaactttttaaaactcaaa 17118456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 9201512 - 9201589
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    ||||||||||  |||||  ||||  |||||||| || | |||| ||||||||||||||||||||||||  ||||||||    
T  9201512 gataaaaataggaatataatattaaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 9201589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 9965098 - 9965139
Alignment:
Q  188 aaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||| || ||| |||||||||||||||||||||||||||    
T  9965098 aaatggtgaaaaattatgaatttaactttttaaaagtcaaaa 9965139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 17056099 - 17056164
Alignment:
Q  187 aaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||||| || | |||| |||||||||||||||||| |||||  |||||||| |||||| |||||    
T  17056099 aaaatggtgaaaagtgataaatttaactttttaaaagacaaaatgttgttgaaaccaatgcaaata 17056164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 17068546 - 17068611
Alignment:
Q  187 aaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||||| || | |||| |||||||||||||||||| |||||  |||||||| |||||| |||||    
T  17068546 aaaatggtgaaaagtgataaatttaactttttaaaagacaaaatgttgttgaaaccaatgcaaata 17068611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 44173213 - 44173128
Alignment:
Q  160 atgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    |||||||||||| |||||| | |||| |||||| | || |||||| ||||||| ||||||||| | ||||  |||||||| |||||    
T  44173213 atgataaaaatagaaatatagcattgaaaaatgatgaaaaatgataaatttaattttttaaaaattaaaatgttgttgaaaccaat 44173128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 2136533 - 2136445
Alignment:
Q  157 aagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    |||| |||||||||| |||||||| ||||||||||| | || | ||  |||||| |||||| |||||| ||||  ||||||||| ||||    
T  2136533 aagaggataaaaatagaaatattgcattggaaaatgatgaaaagtggagaatttgacttttgaaaagtgaaaatattgttgaatacaat 2136445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 245
Target Start/End: Original strand, 3454702 - 3454797
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    |||||||||| | ||| |||||| ||||||| ||||  || |||||||| | |||| | ||||||||||||||||| ||||  ||||||||| ||||    
T  3454702 cattggttaataggatcaaaatagaaatattatattaaaagatggtaaaaagtgataactttaactttttaaaagt-aaaatattgttgaattcaat 3454797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 10522880 - 10522816
Alignment:
Q  165 aaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||| ||| |||||||||||||||||| || | |  |||||||||||||| |||||| ||||    
T  10522880 aaaaatagaaaaattgtattggaaaatggtgaaaagttgtgaatttaacttttcaaaagtaaaaa 10522816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 13997922 - 13997998
Alignment:
Q  163 ataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    ||||||||| |||||| | |||| ||||| || || |||||| ||||||||||||||||| | ||||  ||||||||    
T  13997922 ataaaaatagaaatatagcattgaaaaattgtgaaaaatgataaatttaactttttaaaaattaaaatattgttgaa 13997998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 23685688 - 23685736
Alignment:
Q  181 tattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    |||||||||||||  || | |||| ||||||||||||||||||||||||    
T  23685688 tattggaaaatggggaaaagtgataaatttaactttttaaaagtcaaaa 23685736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 31167680 - 31167624
Alignment:
Q  168 aatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagt 224  Q
    |||| ||||||||| || ||||||| | || | ||||||||||||||||||||||||    
T  31167680 aataaaaatattgtgttagaaaatgatgaaaattgatgaatttaactttttaaaagt 31167624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 246
Target Start/End: Original strand, 1907567 - 1907690
Alignment:
Q  123 ggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaa 222  Q
    ||||||||||||||||| ||||||  |||||| ||| | |||||||| | ||||||||||||| ||||||||||| ||| |||||||||| ||||||| |    
T  1907567 ggaaatgctaaagagtgctcttgagacattggataaaaggataaaaagagaaatattgtattgaaaaatggtaaaaaataatgaatttaattttttaata 1907666  T
Q  223 gtcaaaactttgttgaatccaatg 246  Q
     ||||||  ||||||||| |||||    
T  1907667 atcaaaatattgttgaatgcaatg 1907690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 29034799 - 29034702
Alignment:
Q  142 cttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    ||||| ||||||| ||||  ||||||||||||||||| ||||||||||||||| || | |||| ||||||||||||||||||||||||  ||||||||    
T  29034799 cttgaggcattggataaggggataaaaatataaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 29034702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 131 - 246
Target Start/End: Original strand, 42552458 - 42552572
Alignment:
Q  131 taaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaac 230  Q
    |||||||||||||||| || || ||||||| |||||||||| ||||||||| ||| ||||| ||||| ||| ||||| |||||||||||||||||||||     
T  42552458 taaagagtgttcttgaagcgttagttaagaagataaaaataaaaatattgtgttgaaaaatagtaaaaaataatgaa-ttaactttttaaaagtcaaaat 42552556  T
Q  231 tttgttgaatccaatg 246  Q
     ||||| ||| |||||    
T  42552557 attgttaaattcaatg 42552572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 42222313 - 42222230
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    |||||||||| |||||| ||||||||||||||| || | |||| ||||||||||||||||||||||||  |||||||| |||||    
T  42222313 gataaaaatagaaatatggtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaat 42222230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 43567509 - 43567607
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| ||||  |||||||||| || ||| ||||||||||||||| || | |||| ||||||||||||||||||||||||  |||||||| ||||||    
T  43567509 gcattggataaggagataaaaatagaattatagtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 43567607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 252
Target Start/End: Original strand, 41769623 - 41769756
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttt-tt 218  Q
    |||| ||||| |||||||||  ||||  |||||||||||||||||||||||| ||| ||| ||||  |||||||| || | ||  |||||||| ||| ||    
T  41769623 aaggaaaatgttaaagagtgcccttggagcattggttaagatgataaaaatagaaacattatattaaaaaatggtgaaaagtggagaatttaattttatt 41769722  T
Q  219 aaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||||||||| ||||||||| |||||| ||||    
T  41769723 aaaagtcaaaacattgttgaattcaatgttaata 41769756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 229
Target Start/End: Complemental strand, 44391129 - 44391020
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    |||||| ||||||| ||||| ||||  |||| ||||||||| |||| ||||| |||||||| ||| |||||| ||||| ||| |||||||| ||||||||    
T  44391129 aagggagatgctaatgagtgctcttagtgcaatggttaagaagatacaaatagaaatattgcattagaaaattgtaaaaaattatgaatttgacttttta 44391030  T
Q  220 aaagtcaaaa 229  Q
    ||||| ||||    
T  44391029 aaagttaaaa 44391020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 251
Target Start/End: Complemental strand, 3863171 - 3863045
Alignment:
Q  125 aaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagt 224  Q
    ||||| |||||| ||| |||  |||||||||||| | || ||||||| ||||||||||| || ||||| | || |||  ||||||||||||||| |||||    
T  3863171 aaatgttaaagaatgtccttagtgcattggttaaaaagacaaaaataaaaatattgtatcgggaaatgatgaaaaatagtgaatttaacttttttaaagt 3863072  T
Q  225 caaaactttgttgaatccaatgtaaat 251  Q
     ||||  ||||||||||||||| ||||    
T  3863071 taaaaaattgttgaatccaatgcaaat 3863045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 46042881 - 46042756
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    ||||||||||||||||||||  |||||| |||| | |||||  ||||||||| |||||| ||||| ||||||||| || | | || |||||||||||||     
T  46042881 aagggaaatgctaaagagtggccttgatacatttgataagaatataaaaatagaaatatagtatt-gaaaatggtgaaaagttataaatttaactttttt 46042783  T
Q  220 aaagtcaaaactttgttgaatccaatg 246  Q
    |||||| |||  |||||||| ||||||    
T  46042782 aaagtctaaatgttgttgaaaccaatg 46042756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 36279225 - 36279144
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||| ||| | ||||||||||||||||| | ||||||||||||| || | |||| ||||||||||||||||| ||||||    
T  36279225 gcattggataataggataaaaatataaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaa 36279144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 229
Target Start/End: Original strand, 41188797 - 41188870
Alignment:
Q  156 taagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||| ||||||||||||||||| | ||||||||||||| ||   |||| ||||||||||||||||||||||||    
T  41188797 taagaggataaaaatataaatatagcattggaaaatggtgaaaggtgataaatttaactttttaaaagtcaaaa 41188870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 245
Target Start/End: Complemental strand, 49069685 - 49069564
Alignment:
Q  124 gaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaag 223  Q
    |||||| ||||||||||  |||  ||||||| ||||| |||||||||| |||||| |||||| |||||||| || | |||| ||| |||||||||||||     
T  49069685 gaaatgttaaagagtgtctttggggcattggataagaagataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatctaactttttaaaaa 49069586  T
Q  224 tcaaaactttgttgaatccaat 245  Q
    |||| |  |||||||| |||||    
T  49069585 tcaatatattgttgaaaccaat 49069564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 5240349 - 5240433
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| |||||| |||||||| || | |||| ||||||||||||||||||||||||  || ||||| ||||||    
T  5240349 gataaaaatagaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttattgaaaccaatg 5240433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 8380533 - 8380449
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| | ||||||||||| | || | |||| ||||||||||||||||||||||||  |||||||| ||||||    
T  8380533 gataaaaataaaaatatagcattggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatg 8380449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 3720118 - 3720212
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatcca 243  Q
    ||||| |||| ||||||||||||  ||||||| ||||  |||||||  | |||||| ||||||||||||||||||| ||||| || |||||||||    
T  3720118 cattgattaaaatgataaaaatagtaatattgcattgacaaatggtgtaaaatgataaatttaactttttaaaagttaaaacattcttgaatcca 3720212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 216
Target Start/End: Original strand, 31360269 - 31360363
Alignment:
Q  122 gggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttt 216  Q
    ||||||||||||||||||  |||   | ||| ||| ||| |||||||||| |||||||||||||| |||||||||| | |||| |||||||||||    
T  31360269 gggaaatgctaaagagtgcccttagggtattagtttagaagataaaaatagaaatattgtattgggaaatggtaaaaagtgataaatttaacttt 31360363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 250
Target Start/End: Complemental strand, 1910336 - 1910248
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaa 250  Q
    |||||||||| ||||||   ||| ||||||||| || |||||| ||||||||||||||||||| ||||  |||||||| | ||||||||    
T  1910336 gataaaaatagaaatataacattagaaaatggtgaaaaatgataaatttaactttttaaaagttaaaatgttgttgaaacaaatgtaaa 1910248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 24359725 - 24359809
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| | | |||||||||||||| |  ||| ||||||||||||||||||| ||||  |||||||| ||||||    
T  24359725 gataaaaatagaaatatagcaatggaaaatggtaaaaagggataaatttaactttttaaaagttaaaatgttgttgaaaccaatg 24359809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 27053510 - 27053594
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| | ||  ||||||||| || | |||| ||||||||||||||||||||||||  |||||||| ||||||    
T  27053510 gataaaaatagaaatatagcatcagaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatg 27053594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 29248028 - 29247937
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaat 240  Q
    |||||| ||||||||||||||||| ||| |||  ||||||||| | | || | ||| ||||| |||||||||||||||||||| |||||||||    
T  29248028 gcattgattaagatgataaaaatagaaacattacattggaaaacgatgaaaagtgaagaatt-aactttttaaaagtcaaaacattgttgaat 29247937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 252
Target Start/End: Complemental strand, 40763355 - 40763251
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgt 247  Q
    ||||||| ||||  |||||||||| ||||||   |||| |||||||| || | |||| ||||||||||||||||||| ||||  |||||||| ||||||     
T  40763355 gcattggataaggggataaaaatagaaatataacattgaaaaatggtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatgc 40763256  T
Q  248 aaata 252  Q
    |||||    
T  40763255 aaata 40763251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 40774246 - 40774326
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||| |||||| |||| ||||| |||||||| |||| |||||| | || | |||||||||||||||||||||||| ||||    
T  40774246 cattgattaagaagatacaaatagaaatattgcattgaaaaatgatgaaaattgatgaatttaactttttaaaagttaaaa 40774326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 43958087 - 43958167
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    |||||| ||||  |||||||||| |||||| ||||| |||||| || || |||||| ||||||| ||||||||||||||||    
T  43958087 cattggataaggcgataaaaatagaaatatagtattagaaaattgtgaaaaatgataaatttaattttttaaaagtcaaaa 43958167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 29687547 - 29687484
Alignment:
Q  183 ttggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||||| || | |||||||||||||||||||||||| ||||  |||||||| ||||||    
T  29687547 ttggaaaatggtgaaaagtgatgaatttaactttttaaaagttaaaatgttgttgaaaccaatg 29687484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 30538497 - 30538564
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    |||||||||| |||||| ||||| |||||| || || |||||| ||||||||||||||||| ||||||    
T  30538497 gataaaaatagaaatatagtattagaaaatagtgaaaaatgataaatttaactttttaaaaatcaaaa 30538564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 40066919 - 40066994
Alignment:
Q  147 tgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaa 222  Q
    |||||||| ||||  |||||||||| ||||||  ||||| |||||||| || |||||| |||||||||||||||||    
T  40066919 tgcattggataaggggataaaaatagaaatataatattgaaaaatggtgaaaaatgataaatttaactttttaaaa 40066994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 22521692 - 22521594
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| ||||| ||||||| || |||||| | ||||||||||| | |  | |||| |||||||||| |||||||||||||  |||||||| ||||||    
T  22521692 gcattggataagaggataaaactagaaatatagcattggaaaatgatgagaagtgataaatttaacttcttaaaagtcaaaatgttgttgaaaccaatg 22521594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 241
Target Start/End: Complemental strand, 44478490 - 44478396
Alignment:
Q  147 tgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatc 241  Q
    |||||||||||||| |||| |||||  |||||||||||| ||||| ||||| ||| || ||||| | ||||||||||  ||||  ||||||||||    
T  44478490 tgcattggttaagaggatataaatagtaatattgtattgaaaaattgtaaaaaataataaatttgattttttaaaagctaaaatattgttgaatc 44478396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 16082437 - 16082533
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||||||||| ||| ||| ||||| ||||| | |||||||| || | ||||||||||||| |||||||||| ||    |||||||||||||||    
T  16082437 cattggttaagatgaaaaatatagaaatagtgtatcg-aaaatggtgaaaattgatgaatttaacgttttaaaagttaagttattgttgaatccaatg 16082533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 245
Target Start/End: Original strand, 27236812 - 27236909
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaat 245  Q
    ||||||||||||| || |||  ||||||||||||| ||||||||| | || ||||||  |||| |||| |||||||| ||||  ||||||||| ||||    
T  27236812 gcattggttaagaggacaaacttataaatattgtaatggaaaatgatgaaaaatgatagatttgacttcttaaaagttaaaaaattgttgaattcaat 27236909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 30388695 - 30388744
Alignment:
Q  180 gtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    |||||| |||||||| || |||||| ||||||||||||||||||||||||    
T  30388695 gtattgaaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 30388744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 32204270 - 32204185
Alignment:
Q  166 aaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaat 251  Q
    |||||| |||||||| |||| |||||| | || | |||||||||||||||||||||||| ||||  || |||||| ||||| ||||    
T  32204270 aaaatagaaatattgcattgaaaaatgatgaaaagtgatgaatttaactttttaaaagttaaaatatttttgaatacaatgcaaat 32204185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 48454825 - 48454906
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||| ||||  |||||||||| ||||||   ||||| ||||||| || | |||| ||||||||||||||||||||||||    
T  48454825 gcattggataaggggataaaaatagaaatataacattgggaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 48454906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 3681766 - 3681702
Alignment:
Q  182 attggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||||||| || | |||| ||||||||||||||||||| ||||  |||||||| ||||||    
T  3681766 attggaaaatggtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatg 3681702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 6548602 - 6548538
Alignment:
Q  182 attggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||| ||| ||| || |||||||||||||||||||||||||| ||||  |||||| ||||||||    
T  6548602 attgggaaacggtgaaaaatgatgaatttaactttttaaaagttaaaatattgttggatccaatg 6548538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 7322958 - 7323054
Alignment:
Q  150 attggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||| ||||| |||||||||| ||||||    ||| |||||||| || | |||| ||||||| ||||||||||||||||  |||||||| ||||||    
T  7322958 attggataagaggataaaaatagaaatataaccttgaaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatg 7323054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 40194918 - 40194834
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||||||||||| |||||  ||| || | || | |||| ||||||| ||||||||||||||||  |||||||| ||||||    
T  40194918 gataaaaatataaatatagtattataaattgatgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatg 40194834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 8292851 - 8292760
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    ||||||| ||||  |||||||||| |||||| | ||||||||||||| || | | || |||||  |||||||||||||||||  ||||||||    
T  8292851 gcattggataaggggataaaaatagaaatatagcattggaaaatggtgaaaagttataaatttgcctttttaaaagtcaaaatgttgttgaa 8292760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 16931963 - 16931893
Alignment:
Q  181 tattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    ||||||||||| ||||| | |||  ||||||||||||||||||||||||  |||||||||  ||||||||||    
T  16931963 tattggaaaatagtaaa-agtgaataatttaactttttaaaagtcaaaatattgttgaatttaatgtaaata 16931893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 16937346 - 16937276
Alignment:
Q  181 tattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    ||||||||||| ||||| | |||  ||||||||||||||||||||||||  |||||||||  ||||||||||    
T  16937346 tattggaaaatagtaaa-agtgaataatttaactttttaaaagtcaaaatattgttgaatttaatgtaaata 16937276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 23709901 - 23709842
Alignment:
Q  123 ggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgta 182  Q
    |||||||||||||||||| ||| | | ||||||||||| ||||||| || ||||||||||    
T  23709901 ggaaatgctaaagagtgtccttaaggtattggttaagaggataaaattaaaaatattgta 23709842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 35003727 - 35003637
Alignment:
Q  131 taaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaa 222  Q
    ||||||||| |||||  ||||| ||| ||| || ||||||| ||||||| ||||| |||||||| || | |||| |||||||||||||||||    
T  35003727 taaagagtgctcttggggcattagtttagaggacaaaaatagaaatattatattg-aaaatggtgaaaagtgattaatttaactttttaaaa 35003637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 35404308 - 35404359
Alignment:
Q  199 aatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaa 250  Q
    |||||||||||||||||||||||||| ||||  | |||||||| ||||||||    
T  35404308 aatgatgaatttaactttttaaaagttaaaatatcgttgaatctaatgtaaa 35404359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 252
Target Start/End: Complemental strand, 42291413 - 42291282
Alignment:
Q  123 ggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattgg-aaaatggtaaagaatgatgaa-tttaactttttaa 220  Q
    ||||||||||||| |||   ||| ||||||| |||| | || ||||||| |||||||||||||| ||||| || || ||| || || ||||  |||||||    
T  42291413 ggaaatgctaaagtgtgacattgttgcattgattaaaaggagaaaaatagaaatattgtattggaaaaatagtgaaaaataataaattttatttttttaa 42291314  T
Q  221 aagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||| ||||  ||||||||||||||| |||||    
T  42291313 aagttaaaatattgttgaatccaatgcaaata 42291282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 9887252 - 9887210
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaat 191  Q
    |||||||||||| |||||||||| |||||||| ||||||||||    
T  9887252 cattggttaagaggataaaaatagaaatattgcattggaaaat 9887210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 35239773 - 35239871
Alignment:
Q  131 taaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaa 229  Q
    ||||||||||  |||  ||||| | ||||| ||||||| || |||||| || ||| |||||| ||||   |||||||||||||||||||||||| ||||    
T  35239773 taaagagtgtctttggggcatttgataagaggataaaagtaaaaatatggtgttgaaaaatgataaaacgtgatgaatttaactttttaaaagttaaaa 35239871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 8258674 - 8258739
Alignment:
Q  181 tattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||| |||||||| || | |||| ||||||||||||||| ||||| || ||||||||| ||||||    
T  8258674 tattgaaaaatggtgaaaagtgataaatttaactttttaatagtcataattttgttgaaaccaatg 8258739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 18800166 - 18800246
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatcca 243  Q
    |||||||||| ||||||||||||  |||||  |||||| |||| ||||||||||||||||| | | ||  ||||||||||||    
T  18800166 gataaaaatagaaatattgtatta-aaaataataaagagtgataaatttaactttttaaaaattacaatattgttgaatcca 18800246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 194
Target Start/End: Original strand, 37848301 - 37848374
Alignment:
Q  121 agggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggt 194  Q
    ||||||||| |||||||||  |||   ||||||||||||| || |||  || ||||||||||||||||||||||    
T  37848301 agggaaatgttaaagagtgcccttagggcattggttaagaggacaaacttaaaaatattgtattggaaaatggt 37848374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 37869368 - 37869441
Alignment:
Q  149 cattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaa 222  Q
    ||||||||||||  | ||||||| |||||||||||||||||||| | || ||||||  |||| ||||| |||||    
T  37869368 cattggttaagaaaacaaaaataaaaatattgtattggaaaatgatgaaaaatgatatatttgactttctaaaa 37869441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 44296957 - 44297006
Alignment:
Q  201 tgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaa 250  Q
    |||||||||||| ||||||||||| ||||  | |||||||||||||||||    
T  44296957 tgatgaatttaagtttttaaaagttaaaatatcgttgaatccaatgtaaa 44297006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 46423449 - 46423388
Alignment:
Q  163 ataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagt 224  Q
    ||||||||| ||||||||||||  ||||||||||| | |||| ||||||| || ||||||||    
T  46423449 ataaaaataaaaatattgtatttaaaaatggtaaaaagtgataaatttaatttcttaaaagt 46423388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 16957711 - 16957667
Alignment:
Q  208 tttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    ||||||||||||||||||||||  |||||||||  ||||||||||    
T  16957711 tttaactttttaaaagtcaaaatattgttgaatttaatgtaaata 16957667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 22707141 - 22707057
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| |||||| | ||||||||||  | || |||||| ||||| ||||||||||||| || |  |||||||| ||||||    
T  22707141 gataaaaatagaaatatagcattggaaaataatgaaaaatgataaattttactttttaaaagttaacatgttgttgaaaccaatg 22707057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 31626058 - 31626142
Alignment:
Q  162 gataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    |||||||||| ||||||  ||||  |||||| | || | |||| ||||||||||||||||| ||||||  |||||||| ||||||    
T  31626058 gataaaaataaaaatataatattaaaaaatgatgaaaagtgataaatttaactttttaaaaatcaaaatgttgttgaaaccaatg 31626142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 34111835 - 34111911
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagt 224  Q
    |||||||||||||  | || |||| ||||||||| |||| || ||||||| ||||| | ||| ||||||||||||||    
T  34111835 gcattggttaagagaacaataatagaaatattgtgttgggaagtggtaaaaaatgaaggattcaactttttaaaagt 34111911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 41141124 - 41141040
Alignment:
Q  154 gttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttga 238  Q
    |||||||| || |||||| ||| | |||||||||||||||| || | |  | ||||||||||||||||| ||||||  |||||||    
T  41141124 gttaagataattaaaatagaaaaaatgtattggaaaatggtgaaaagttgttaatttaactttttaaaaatcaaaaaattgttga 41141040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 43189693 - 43189741
Alignment:
Q  201 tgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaa 249  Q
    |||||||||| ||||||||||||| ||||  ||||||||| ||||||||    
T  43189693 tgatgaatttgactttttaaaagttaaaatattgttgaattcaatgtaa 43189741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 252
Target Start/End: Complemental strand, 39681 - 39591
Alignment:
Q  160 atgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatgtaaata 252  Q
    |||||||||||| ||| ||||||||||||||| || || | ||| |||||||||||||||||||||  ||| ||||||||| |||||||||||    
T  39681 atgataaaaatagaaacattgtattggaaaatagtgaaaactgaagaatttaactttttaaaagtc--aacattgttgaattcaatgtaaata 39591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 37364 - 37480
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    ||||||||| |||||||||||||||    |||||| ||||| ||| |||||| |||||||||||||          || ||||||||||||||||||| |    
T  37364 aagggaaatactaaagagtgttcttaggacattggataagaggattaaaatagaaatattgtattg----------aaaaatgatgaatttaacttttca 37453  T
Q  220 aaagtcaaaactttgttgaatccaatg 246  Q
    ||||||||||  || ||||||||||||    
T  37454 aaagtcaaaatgttattgaatccaatg 37480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 16775 - 16872
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| ||||  |||||||||| |||||| | |||| ||||| || || |||||| ||| ||||||||||||||||||||  |||||||| ||||||    
T  16775 gcattggataaggggataaaaatagaaatatagcattg-aaaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaaccaatg 16872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 26943 - 27040
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| ||||  |||||||||| |||||| | |||| ||||| || || |||||| ||| ||||||||||||||||||||  |||||||| ||||||    
T  26943 gcattggataaggggataaaaatagaaatatagcattg-aaaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaaccaatg 27040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 246
Target Start/End: Original strand, 37109 - 37206
Alignment:
Q  148 gcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaatccaatg 246  Q
    ||||||| ||||  |||||||||| |||||| | |||| ||||| || || |||||| ||| ||||||||||||||||||||  |||||||| ||||||    
T  37109 gcattggataaggggataaaaatagaaatatagcattg-aaaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaaccaatg 37206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 392169 - 392226
Alignment:
Q  182 attggaaaatggtaaagaatgatgaatttaactttttaaaagtcaaaactttgttgaa 239  Q
    |||| ||||||||||| | |||| ||||||||||||||||||||||||  ||||||||    
T  392169 attgaaaaatggtaaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 392226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 62553 - 62662
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    ||||||||||||||| ||||  ||||| | |||||||||||| | | ||||| ||||| | | ||| |||||||| || | || |||||| |||||| ||    
T  62553 aagggaaatgctaaatagtgcccttgaagtattggttaagataacataaatagaaataattttttgaaaaatggtgaaaagtgttgaattcaactttcta 62652  T
Q  220 aaagtcaaaa 229  Q
    ||||| ||||    
T  62653 aaagttaaaa 62662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 69885 - 69994
Alignment:
Q  120 aagggaaatgctaaagagtgttcttgatgcattggttaagatgataaaaatataaatattgtattggaaaatggtaaagaatgatgaatttaacttttta 219  Q
    ||||||||||||||| ||||  ||||| | |||||||||||| | | ||||| ||||| | | ||| |||||||| || | || |||||| |||||| ||    
T  69885 aagggaaatgctaaatagtgcccttgaagtattggttaagataacataaatagaaataattttttgaaaaatggtgaaaagtgttgaattcaactttcta 69984  T
Q  220 aaagtcaaaa 229  Q
    ||||| ||||    
T  69985 aaagttaaaa 69994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University