View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9391_low_60 (Length: 215)
Name: NF9391_low_60
Description: NF9391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9391_low_60 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 52 - 215
Target Start/End: Original strand, 36848936 - 36849099
Alignment:
| Q |
52 |
taatctatcaaaggttccaaacctcttacgaaattgtttttatttaatggttgatgcgtttttaatccaatgggagctcaaaagagcatccatgctggca |
151 |
Q |
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| T |
36848936 |
taatctatcaaaggttccaaacctcttacgaaattgtttttatttaatggttgttgcgtttttaatccaatgggagctcaaaagagcatccatgctggca |
36849035 |
T |
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| Q |
152 |
aaggttacaatttcattcaacatttcataacaatctttcatttttctctgttttactattgatg |
215 |
Q |
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| T |
36849036 |
aaggttacaatttcattcaacatttcataacaatctttcatttttctctgttttactattgatg |
36849099 |
T |
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