View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9392_low_29 (Length: 243)
Name: NF9392_low_29
Description: NF9392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9392_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 8 - 230
Target Start/End: Original strand, 15694794 - 15695016
Alignment:
| Q |
8 |
agttataacctttgcttttggctgcatcagcagatagatatgagaggatgcttttgagatttgttttgtatgcattgctaagaacctttggttttgagta |
107 |
Q |
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| T |
15694794 |
agttataacctttgcttttggctgcatcagcagatagatatgagaggatgcttttgagatttgttttgtatgcattgctaagaacctttggttttgagta |
15694893 |
T |
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| Q |
108 |
attacagtcatcccgcatataagtaggtgattgagcttttgtaatgagttgtttgaagcttatatatagtatgaaagcaaaaaatattgatgtcaagttt |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
15694894 |
attacagtcatcccgcatataagtaggtgattgagcttttgtaatgagttgtttgaagcttatatatagtatgaaagcaaaaaatattgatctcaagttt |
15694993 |
T |
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| Q |
208 |
agttttcttccttccatggagta |
230 |
Q |
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||||||||||||||||||||||| |
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| T |
15694994 |
agttttcttccttccatggagta |
15695016 |
T |
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