View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9395_low_43 (Length: 233)

Name: NF9395_low_43
Description: NF9395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9395_low_43
NF9395_low_43
[»] chr7 (35 HSPs)
chr7 (25-225)||(27283648-27283848)
chr7 (95-211)||(37109846-37109962)
chr7 (97-221)||(38258521-38258645)
chr7 (96-211)||(17842657-17842772)
chr7 (96-221)||(18797304-18797427)
chr7 (96-221)||(30055501-30055627)
chr7 (96-221)||(32821114-32821239)
chr7 (97-221)||(24211717-24211841)
chr7 (95-221)||(37346996-37347122)
chr7 (141-221)||(7334814-7334894)
chr7 (96-221)||(31579125-31579255)
chr7 (95-221)||(4582893-4583019)
chr7 (95-221)||(5657542-5657668)
chr7 (96-221)||(43686016-43686140)
chr7 (98-213)||(27421448-27421563)
chr7 (141-219)||(38053506-38053584)
chr7 (141-225)||(12390687-12390771)
chr7 (154-221)||(29173573-29173640)
chr7 (141-221)||(10481624-10481705)
chr7 (96-221)||(21991611-21991736)
chr7 (96-221)||(32432432-32432552)
chr7 (98-221)||(11071182-11071306)
chr7 (95-221)||(8861259-8861385)
chr7 (98-208)||(23111167-23111277)
chr7 (96-217)||(9355891-9356012)
chr7 (141-221)||(22687259-22687339)
chr7 (96-221)||(26524388-26524513)
chr7 (96-221)||(31520785-31520909)
chr7 (141-221)||(44413440-44413520)
chr7 (97-225)||(48928621-48928748)
chr7 (143-225)||(48928354-48928435)
chr7 (95-212)||(12165726-12165843)
chr7 (153-217)||(26980355-26980419)
chr7 (141-221)||(34362210-34362289)
chr7 (153-221)||(41765139-41765207)
[»] chr3 (29 HSPs)
chr3 (96-221)||(3655262-3655387)
chr3 (96-217)||(40552323-40552444)
chr3 (95-221)||(37203057-37203183)
chr3 (141-221)||(4761709-4761789)
chr3 (96-221)||(26941320-26941445)
chr3 (96-221)||(47481513-47481638)
chr3 (142-221)||(42506135-42506214)
chr3 (95-221)||(20373356-20373482)
chr3 (95-221)||(51213041-51213167)
chr3 (96-221)||(35844317-35844442)
chr3 (96-221)||(48354932-48355057)
chr3 (98-218)||(54828764-54828883)
chr3 (98-221)||(46297822-46297945)
chr3 (144-217)||(21009866-21009939)
chr3 (96-217)||(34132926-34133047)
chr3 (95-221)||(4015450-4015576)
chr3 (95-221)||(37157698-37157823)
chr3 (96-217)||(39282644-39282764)
chr3 (141-227)||(40936027-40936113)
chr3 (96-221)||(22450959-22451084)
chr3 (141-221)||(29099391-29099471)
chr3 (141-221)||(54505844-54505923)
chr3 (95-221)||(27480439-27480565)
chr3 (141-221)||(44186561-44186641)
chr3 (151-221)||(24708177-24708245)
chr3 (143-221)||(7327542-7327620)
chr3 (183-221)||(53176132-53176170)
chr3 (188-221)||(46994721-46994754)
chr3 (141-177)||(41585411-41585447)
[»] chr1 (37 HSPs)
chr1 (96-217)||(18422647-18422768)
chr1 (96-221)||(15382929-15383054)
chr1 (141-221)||(28564836-28564916)
chr1 (106-214)||(37451292-37451400)
chr1 (96-221)||(19899824-19899949)
chr1 (98-221)||(15752027-15752150)
chr1 (96-231)||(32267030-32267165)
chr1 (95-225)||(23999342-23999472)
chr1 (95-221)||(30327007-30327133)
chr1 (96-221)||(8222127-8222249)
chr1 (98-221)||(28769651-28769773)
chr1 (25-91)||(39468043-39468109)
chr1 (141-221)||(10922768-10922848)
chr1 (141-221)||(51128900-51128980)
chr1 (96-221)||(37618949-37619076)
chr1 (96-219)||(2959744-2959867)
chr1 (96-221)||(30254420-30254544)
chr1 (141-221)||(27763366-27763445)
chr1 (141-221)||(32216096-32216176)
chr1 (44-95)||(39446673-39446724)
chr1 (87-221)||(42721026-42721160)
chr1 (96-221)||(1547283-1547408)
chr1 (96-221)||(10182063-10182188)
chr1 (141-217)||(46931452-46931528)
chr1 (171-221)||(7079118-7079168)
chr1 (95-221)||(3309143-3309268)
chr1 (141-225)||(3534973-3535057)
chr1 (141-217)||(9903113-9903189)
chr1 (96-217)||(34012436-34012557)
chr1 (141-221)||(48620678-48620758)
chr1 (179-221)||(25160711-25160753)
chr1 (95-221)||(38823209-38823335)
chr1 (157-221)||(238568-238631)
chr1 (157-221)||(21289729-21289793)
chr1 (174-221)||(27227540-27227587)
chr1 (154-221)||(47279243-47279310)
chr1 (96-221)||(16415641-16415767)
[»] chr2 (27 HSPs)
chr2 (95-221)||(37905708-37905833)
chr2 (96-221)||(11366459-11366584)
chr2 (141-221)||(43648323-43648403)
chr2 (95-221)||(33551064-33551190)
chr2 (98-221)||(36641988-36642111)
chr2 (96-225)||(4264151-4264280)
chr2 (167-221)||(39167441-39167495)
chr2 (95-209)||(35958908-35959022)
chr2 (141-221)||(19289401-19289481)
chr2 (95-210)||(26357576-26357691)
chr2 (98-221)||(33660446-33660569)
chr2 (141-221)||(2325448-2325528)
chr2 (141-221)||(3176984-3177064)
chr2 (96-221)||(4166922-4167047)
chr2 (141-212)||(27350025-27350096)
chr2 (95-221)||(4478367-4478494)
chr2 (151-221)||(33902121-33902191)
chr2 (98-221)||(41463928-41464051)
chr2 (96-205)||(17054190-17054299)
chr2 (96-221)||(17071815-17071940)
chr2 (96-221)||(29242216-29242341)
chr2 (97-221)||(13711465-13711589)
chr2 (143-221)||(4763678-4763756)
chr2 (95-213)||(19313851-19313969)
chr2 (141-221)||(33709310-33709390)
chr2 (98-212)||(43770926-43771039)
chr2 (141-221)||(19424706-19424786)
[»] chr8 (27 HSPs)
chr8 (96-221)||(1150171-1150296)
chr8 (102-221)||(37970585-37970704)
chr8 (95-221)||(10555268-10555394)
chr8 (95-225)||(13307621-13307751)
chr8 (141-221)||(1204971-1205051)
chr8 (95-221)||(23854497-23854623)
chr8 (96-221)||(36695032-36695157)
chr8 (96-221)||(43643661-43643786)
chr8 (95-221)||(6098584-6098710)
chr8 (96-217)||(16446945-16447066)
chr8 (96-221)||(30654649-30654774)
chr8 (95-221)||(12876107-12876233)
chr8 (157-221)||(1149698-1149762)
chr8 (96-217)||(9864147-9864268)
chr8 (141-209)||(8803888-8803956)
chr8 (141-221)||(16222907-16222987)
chr8 (96-221)||(27082904-27083029)
chr8 (141-221)||(31933952-31934032)
chr8 (96-217)||(34894966-34895087)
chr8 (96-212)||(34952106-34952222)
chr8 (98-221)||(465843-465966)
chr8 (96-221)||(41362517-41362639)
chr8 (96-221)||(38643977-38644102)
chr8 (141-211)||(40862463-40862534)
chr8 (90-161)||(15009235-15009306)
chr8 (167-220)||(4133077-4133130)
chr8 (141-217)||(11727068-11727144)
[»] chr5 (39 HSPs)
chr5 (97-214)||(31705668-31705785)
chr5 (141-221)||(24886149-24886229)
chr5 (141-221)||(14919578-14919658)
chr5 (96-221)||(35826533-35826658)
chr5 (151-221)||(5829956-5830026)
chr5 (96-217)||(22255181-22255303)
chr5 (96-221)||(36860423-36860548)
chr5 (96-207)||(17158094-17158208)
chr5 (135-221)||(43308702-43308787)
chr5 (95-221)||(7693229-7693355)
chr5 (95-221)||(36866761-36866887)
chr5 (96-221)||(5112363-5112488)
chr5 (96-221)||(9200233-9200358)
chr5 (96-221)||(12910350-12910480)
chr5 (96-217)||(22974136-22974257)
chr5 (141-221)||(30969374-30969454)
chr5 (96-221)||(38528287-38528411)
chr5 (141-221)||(27330351-27330429)
chr5 (96-221)||(1429195-1429320)
chr5 (141-221)||(27318537-27318617)
chr5 (85-221)||(25500976-25501112)
chr5 (158-221)||(35504427-35504490)
chr5 (96-219)||(19119859-19119982)
chr5 (97-212)||(32563150-32563265)
chr5 (95-217)||(40133384-40133506)
chr5 (141-217)||(699195-699271)
chr5 (98-214)||(7208920-7209037)
chr5 (157-221)||(21088816-21088880)
chr5 (141-191)||(13956425-13956475)
chr5 (96-221)||(8741936-8742062)
chr5 (95-177)||(26317778-26317860)
chr5 (95-217)||(35511531-35511653)
chr5 (141-177)||(22255620-22255656)
chr5 (141-221)||(26268119-26268199)
chr5 (96-221)||(39572819-39572944)
chr5 (142-221)||(5837601-5837680)
chr5 (138-216)||(8437008-8437086)
chr5 (143-221)||(33908280-33908358)
chr5 (141-221)||(22980838-22980918)
[»] scaffold0291 (1 HSPs)
scaffold0291 (98-221)||(7889-8012)
[»] chr6 (13 HSPs)
chr6 (96-221)||(1945833-1945959)
chr6 (96-225)||(5627391-5627520)
chr6 (96-221)||(7055274-7055399)
chr6 (96-221)||(4318882-4319007)
chr6 (96-217)||(8513233-8513354)
chr6 (95-225)||(7235090-7235219)
chr6 (96-221)||(3879998-3880123)
chr6 (141-212)||(33893070-33893141)
chr6 (151-221)||(6091242-6091312)
chr6 (151-221)||(15491670-15491740)
chr6 (141-211)||(29182208-29182278)
chr6 (153-221)||(18498490-18498559)
chr6 (157-221)||(21017171-21017235)
[»] chr4 (41 HSPs)
chr4 (96-221)||(37663827-37663950)
chr4 (96-221)||(19089539-19089664)
chr4 (141-217)||(19440738-19440814)
chr4 (96-221)||(25184113-25184238)
chr4 (96-221)||(25701143-25701268)
chr4 (96-209)||(34361589-34361702)
chr4 (96-221)||(55477977-55478106)
chr4 (143-221)||(879634-879712)
chr4 (96-211)||(3042611-3042726)
chr4 (135-221)||(23761111-23761197)
chr4 (141-221)||(29584286-29584364)
chr4 (33-85)||(26143928-26143980)
chr4 (96-221)||(30002710-30002835)
chr4 (96-177)||(32912710-32912791)
chr4 (96-188)||(4396326-4396418)
chr4 (89-221)||(47253742-47253873)
chr4 (96-208)||(50697242-50697354)
chr4 (98-221)||(36493774-36493897)
chr4 (96-221)||(35021121-35021246)
chr4 (96-221)||(42199729-42199854)
chr4 (134-217)||(37287772-37287855)
chr4 (95-211)||(39397917-39398033)
chr4 (98-221)||(27396618-27396741)
chr4 (95-221)||(7703516-7703642)
chr4 (141-221)||(17167758-17167838)
chr4 (141-221)||(17173335-17173415)
chr4 (141-217)||(34948187-34948263)
chr4 (96-221)||(35025674-35025799)
chr4 (141-211)||(54499334-54499405)
chr4 (151-221)||(50764785-50764855)
chr4 (95-177)||(53124286-53124368)
chr4 (96-201)||(4205116-4205221)
chr4 (96-225)||(38011854-38011983)
chr4 (97-212)||(4597994-4598108)
chr4 (167-221)||(9139316-9139370)
chr4 (97-207)||(37775670-37775780)
chr4 (97-126)||(51204580-51204609)
chr4 (168-221)||(55241190-55241243)
chr4 (145-221)||(6864084-6864160)
chr4 (141-217)||(46888247-46888323)
chr4 (153-221)||(49376024-49376092)
[»] scaffold0002 (4 HSPs)
scaffold0002 (151-214)||(408495-408558)
scaffold0002 (96-221)||(134-259)
scaffold0002 (96-126)||(408724-408754)
scaffold0002 (141-206)||(94458-94523)
[»] scaffold0061 (1 HSPs)
scaffold0061 (98-221)||(43959-44082)
[»] scaffold0022 (1 HSPs)
scaffold0022 (98-221)||(146076-146199)
[»] scaffold0017 (1 HSPs)
scaffold0017 (98-221)||(154705-154828)


Alignment Details
Target: chr7 (Bit Score: 152; Significance: 1e-80; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 25 - 225
Target Start/End: Original strand, 27283648 - 27283848
Alignment:
Q  25 gtaatcactattgatagtgaattaatgcctattttgaaaactaatcaacattttaaatatatattttatgtggaaaattctatggtgaagtcataaaaat 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27283648 gtaatcactattgatagtgaattaatgcctattttgaaaactaatcaacattttaaatatatattttatgtggaaaattctatggtgaagttataaaaat 27283747  T
Q  125 gannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtattat 224  Q
    ||       ||| || ||||||||| ||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||    
T  27283748 gatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccaccgtttgtacaatgaaatcaaaagttcagtcctcatagtattat 27283847  T
Q  225 c 225  Q
    |    
T  27283848 c 27283848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 95 - 211
Target Start/End: Original strand, 37109846 - 37109962
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    ||||||||||||||||||||||||||||||||       ||| || ||||||||| ||||| ||||||||||||||||||||| |||||||||||||| |    
T  37109846 tggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatg 37109945  T
Q  195 acatcaaaagttcagtc 211  Q
    |||||||||||||||||    
T  37109946 acatcaaaagttcagtc 37109962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 97 - 221
Target Start/End: Original strand, 38258521 - 38258645
Alignment:
Q  97 gaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggac 196  Q
    |||||||||| |||||||||||||||||||       ||| || ||||||||| ||||| ||||||||||||||||||||| |||||||||||||| |||    
T  38258521 gaaaattctacggtgaagtcataaaaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccacaccgtttgtacaatgac 38258620  T
Q  197 atcaaaagttcagtcctcatagtat 221  Q
    |||||||||||| ||||||||||||    
T  38258621 atcaaaagttcaatcctcatagtat 38258645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 96 - 211
Target Start/End: Complemental strand, 17842772 - 17842657
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||||||||||||||||||||||||||       ||| || ||||||||| ||||| ||||||||||||||||||||| |||||||||||||| ||    
T  17842772 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatga 17842673  T
Q  196 catcaaaagttcagtc 211  Q
    ||||||||| ||||||    
T  17842672 catcaaaagctcagtc 17842657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 18797304 - 18797427
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| | |||||       ||| || ||||||||  ||||| ||||||||||||||||||||| ||| |||||||||| ||    
T  18797304 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacact--aacataaaaaatgtaatgagtaacaccccactgtttgtacaatga 18797401  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||| ||||||||||||    
T  18797402 catcaaaagttcaatcctcatagtat 18797427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 30055501 - 30055627
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnngg-taaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    ||||||||||||||||||||||||| |||||        | | || ||||||||| || ||||||| |||||||||||||||| ||| |||||||||| |    
T  30055501 ggaaaattctatggtgaagtcataagaatgactttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtacaatg 30055600  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||||||||||||||||    
T  30055601 acatcaaaagttcagtcctcatagtat 30055627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 32821239 - 32821114
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| |||||||       ||| || |||||| || ||||||||||||||| ||||||||||  ||| |||||||||| |     
T  32821239 ggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttaacaatataacatcaaaaatgtagtgagtaacacaccactgtttgtacaatgg 32821140  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||||| ||||||    
T  32821139 catcaaaagttcagtcctcgtagtat 32821114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 221
Target Start/End: Original strand, 24211717 - 24211841
Alignment:
Q  97 gaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggac 196  Q
    |||||||||||||||||||||||| |||||       ||| || ||||||||| |||||||||||||||||||||||||||  || |||| || || | |    
T  24211717 gaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccctactgtttatagaatggc 24211816  T
Q  197 atcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||| |||||||||||    
T  24211817 atcaaaagttcagccctcatagtat 24211841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 37346996 - 37347122
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    ||||||||| |||||||||||||| |||||||       ||| || |||| |||| | |||||||||| |||||||||||||| ||  |||||||||  |    
T  37346996 tggaaaattttatggtgaagtcatgaaaatgatttttttggtgaagttaatactataccatcaaaaatataatgagtaacaccccattgtttgtacagtg 37347095  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||||||||||||||||    
T  37347096 acatcaaaagttcagtcctcatagtat 37347122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 7334814 - 7334894
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| ||||| ||| ||||||||||||||||| ||| |||||||||| ||||||||||||||||| ||||||||||    
T  7334814 ttaacactataacataaaatatgtaatgagtaacaccccactgtttgtacaatgacatcaaaagttcagttctcatagtat 7334894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 31579255 - 31579125
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccg-----tttgtac 190  Q
    ||||||||||||||||||||||||| ||| |       ||| || ||||||||| ||||||||||||||||||||||||||| ||| |     ||| |||    
T  31579255 ggaaaattctatggtgaagtcataagaataatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttaatttatac 31579156  T
Q  191 aaggacatcaaaagttcagtcctcatagtat 221  Q
    || |||||||||||||||||| |||||||||    
T  31579155 aatgacatcaaaagttcagtcttcatagtat 31579125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 4582893 - 4583019
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||||||||||||  |||||||       ||| || |||| |||| |  |||||||||||  ||||||||||| |||  ||||||||| |    
T  4582893 tggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaatactatagtatcaaaaatgttgtgagtaacaccccactatttgtacaatg 4582992  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||||||| ||||||||    
T  4582993 acatcaaaagttcagtccccatagtat 4583019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 5657668 - 5657542
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||||||||||||| | |||||        || || ||||||||| |||||||||| |||  ||||||||||| ||| |||||||||  |    
T  5657668 tggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtg 5657569  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
     |||||||||||||||| |||||||||    
T  5657568 gcatcaaaagttcagtcttcatagtat 5657542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 43686016 - 43686140
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||  |||||||       ||| || ||||||||| || |||||||||||  ||||||||||| ||| |||||||||| |     
T  43686016 ggaaaattctatggtgaagtcacgaaaatgactttttgggtgaagttaacactataatatcaaaaatgttgtgagtaacacc-cactgtttgtacaatgg 43686114  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||||||  |||||||    
T  43686115 catcaaaagttcagtccctatagtat 43686140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 213
Target Start/End: Complemental strand, 27421563 - 27421448
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggaca 197  Q
    ||||||||||||||||||| | | |||||       ||| || ||||||||| |||||||||| |||  ||||||||||  ||| |||||||||| ||||    
T  27421563 aaaattctatggtgaagtcgtgataatgatttttttggtgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtttgtacaatgaca 27421464  T
Q  198 tcaaaagttcagtcct 213  Q
    ||||||||||||||||    
T  27421463 tcaaaagttcagtcct 27421448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 38053506 - 38053584
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagt 219  Q
    |||| |||| ||||| ||||||||||||||||| |||  || |||||||||| ||||||||||||||||| ||||||||    
T  38053506 ttaatactataacataaaaaatgtaatgagtaaaaccctactgtttgtacaatgacatcaaaagttcagttctcatagt 38053584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 12390771 - 12390687
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtattatc 225  Q
    ||||||||| |||||||||| |||||||||||||| | ||| |||||| ||  |||||||||||||  |||| ||||||||||||    
T  12390771 ttaacactataacatcaaaagtgtaatgagtaacatcccactgtttgtgcagtgacatcaaaagttatgtccccatagtattatc 12390687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 29173573 - 29173640
Alignment:
Q  154 atcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||| |||  ||||||||||  ||| |||||||||| ||||||||||||||||||||||||||||    
T  29173573 atcaaaagtgttgtgagtaacactccactgtttgtacaatgacatcaaaagttcagtcctcatagtat 29173640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 10481624 - 10481705
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaaca-cctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| ||||| |||||| |||||||||||| || ||| |||||||||| |||||||||| ||||||| | |||||||    
T  10481624 ttaacactataacataaaaaatataatgagtaacacccccactgtttgtacaatgacatcaaaaattcagtctttatagtat 10481705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 21991611 - 21991736
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||| ||||||||||| | |||||       ||| || ||||||||| | |||||||| |||   |||||||||| ||| |||||||||  |     
T  21991611 ggaaaattctagggtgaagtcatgagaatgatttttatggtgaagttaacactatagcatcaaaattgttgcgagtaacaccccactgtttgtacagtgt 21991710  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||| ||||||||    
T  21991711 catcaaaagttcagtccccatagtat 21991736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 32432432 - 32432552
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||  |||||||       ||| || |||||||||     ||||||||||  ||||||||||| ||  |||||||||| ||    
T  32432432 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacacta-----tcaaaaatgttgtgagtaacaccccattgtttgtacaatga 32432526  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||  ||||||||    
T  32432527 catcaaaagttcagtctccatagtat 32432552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 221
Target Start/End: Original strand, 11071182 - 11071306
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatg-annnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggac 196  Q
    ||||||||||||||||||||| |||||| |       |||||| |||  |||| | |||||||||| ||  |||||||||  ||| |||||||||  |||    
T  11071182 aaaattctatggtgaagtcatgaaaatgtatttttttggtaaagttagtactatatcatcaaaaatatagcgagtaacactccactgtttgtacagtgac 11071281  T
Q  197 atcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||| ||||||||||    
T  11071282 atcaaaagttcagttctcatagtat 11071306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 8861259 - 8861385
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||||||||||||| | |||||        |  || ||||||||| | |||||||| ||| |||| ||||||| ||| |||||||||  |    
T  8861259 tggaaaattctatggtgaagtcatgagaatgacttttctcgcgaagttaacactatagcatcaaaagtgttatgaataacaccccactgtttgtacagtg 8861358  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
     ||||||||||| ||||| ||||||||    
T  8861359 gcatcaaaagttaagtccccatagtat 8861385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 208
Target Start/End: Original strand, 23111167 - 23111277
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggaca 197  Q
    |||||||| |||||||||||| |||||||       ||| || ||||||||| |||||||||||| |  ||||||||||  |||  ||||||||| | ||    
T  23111167 aaaattctgtggtgaagtcatgaaaatgatttttctggtgaagttaacactataacatcaaaaatattgtgagtaacacaccactatttgtacaatggca 23111266  T
Q  198 tcaaaagttca 208  Q
    |||||||||||    
T  23111267 tcaaaagttca 23111277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 217
Target Start/End: Complemental strand, 9356012 - 9355891
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||| |||||||||||||| | |||||       ||| || ||||||||| | ||| ||||||||| |||| || ||| ||| |||||||||  ||    
T  9356012 ggaaaattttatggtgaagtcatgagaatgaccattttggtgaatttaacactatagcataaaaaatgtagtgagcaataccccactgtttgtacagtga 9355913  T
Q  196 catcaaaagttcagtcctcata 217  Q
    ||||||||||| ||| ||||||    
T  9355912 catcaaaagtttagttctcata 9355891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 22687259 - 22687339
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| ||||||||||||||  ||||||||||  ||| |||||| ||  |  |||||||||||||||| ||||||||    
T  22687259 ttaacactataacatcaaaaatgttgtgagtaacactccactgtttgtgcagtggtatcaaaagttcagtccccatagtat 22687339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 26524513 - 26524388
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| | |||||       ||| |  ||||||||| ||||||||||||||  ||| ||||||  ||  |||||| ||  |     
T  26524513 ggaaaattctatggtgaagtcatgagaatgacttttctggtgatgttaacactataacatcaaaaatgttgtgactaacactccattgtttgtgcagtgg 26524414  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    |||||||||| |||||||||||||||    
T  26524413 catcaaaagtccagtcctcatagtat 26524388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 31520909 - 31520785
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||| |||| ||||||||| |||||||       ||| || |||| |||| | |||||||||| || ||||||||||  ||  |||||||||  ||    
T  31520909 ggaaaattttatgatgaagtcatgaaaatgacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacactccattgtttgtacagtga 31520810  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||| ||||||||    
T  31520809 catcaaaagttcagtcc-catagtat 31520785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 44413520 - 44413440
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| |||||||||||| || ||||||||||| ||  |||||||||  || ||||||||||| |||  ||||||||    
T  44413520 ttaacactataacatcaaaaatatagtgagtaacaccccaatgtttgtacactgaaatcaaaagttcggtctccatagtat 44413440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 225
Target Start/End: Complemental strand, 48928748 - 48928621
Alignment:
Q  97 gaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggac 196  Q
    ||||||| |||||||||||||| | |||||       ||| || | ||||||| |||||||||| |||| |||||| |||| |||  |||||||   | |    
T  48928748 gaaaattttatggtgaagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgcc 48928649  T
Q  197 atcaaaagttcagtcctcatagtattatc 225  Q
    |||||||||||||||| ||||||||||||    
T  48928648 atcaaaagttcagtcc-catagtattatc 48928621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 48928435 - 48928354
Alignment:
Q  143 aacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtattatc 225  Q
    ||||||| |||||||||| |||| |||||| |||| |||  |||||||   | ||||||||||||||||| ||||||||||||    
T  48928435 aacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgccatcaaaagttcagtcc-catagtattatc 48928354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 12165726 - 12165843
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||| ||||||||| | |||||||       ||| || ||||||||| | |||| ||| |||  ||||||||||| ||| |||||||||  |    
T  12165726 tggaaaattctacggtgaagtcgttaaaatgacttttctggtgaagttaacactatagcatccaaagtgttgtgagtaacaccccactgtttgtacagtg 12165825  T
Q  195 acatcaaaagttcagtcc 212  Q
     ||||||||||| |||||    
T  12165826 gcatcaaaagttaagtcc 12165843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 26980355 - 26980419
Alignment:
Q  153 catcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcata 217  Q
    |||||||| |||  ||||||||||| ||| |||||||||  | ||||||||||||||||| ||||    
T  26980355 catcaaaagtgttgtgagtaacaccccacggtttgtacagtggcatcaaaagttcagtccccata 26980419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 34362289 - 34362210
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| | |||||||| |||  ||||||||||| ||| |||||||||  | |||| |||||||||| ||||||||||    
T  34362289 ttaacactatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtggcatc-aaagttcagttctcatagtat 34362210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 41765207 - 41765139
Alignment:
Q  153 catcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||||| |||| |||||| |||| ||| ||||||||   | |||||||||| |||||||||||||||    
T  41765207 catcaaaagtgtagtgagtagcaccccactgtttgtacggtggcatcaaaagtccagtcctcatagtat 41765139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 7e-36; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 3655387 - 3655262
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||| ||||||||||||||||||||||       | |||| ||||||||| ||||| ||||||||||||||||||||| |||||||||||||| ||    
T  3655387 ggaaaattttatggtgaagtcataaaaatgacttttttgataaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatga 3655288  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||||||||||||    
T  3655287 catcaaaagttcagtcctcatagtat 3655262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 217
Target Start/End: Complemental strand, 40552444 - 40552323
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| | |||||       ||  || ||||||||| ||||||||||||||||||||||||||  |||||||||||||| ||    
T  40552444 ggaaaattctatggtgaagtcatgagaatgacttttttggagaagttaacactataacatcaaaaatgtaatgagtaacactccaccgtttgtacaatga 40552345  T
Q  196 catcaaaagttcagtcctcata 217  Q
    ||||||||||||||||||||||    
T  40552344 catcaaaagttcagtcctcata 40552323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 37203057 - 37203183
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    ||||||||||||||||||||||||||||||||       | | || ||||||||| |||||||||| |||| ||||||||||| ||| |||||||||  |    
T  37203057 tggaaaattctatggtgaagtcataaaaatgatttttttgatgaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtacagtg 37203156  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
     ||||||||||||||||||||||||||    
T  37203157 gcatcaaaagttcagtcctcatagtat 37203183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 4761789 - 4761709
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||| |||| || ||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||    
T  4761789 ttaatactataatatcaaaaatgtaatgagtaacacttcactgtttgtacaatgacatcaaaagttcagtcctcatagtat 4761709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 26941445 - 26941320
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||||| |||||       ||| || ||||||||| || ||||||| | |||||||||||||| ||| ||||||| || ||    
T  26941445 ggaaaattctatggtgaagtcataagaatgatttttttggtgaagttaacactataaaatcaaaattataatgagtaacaccccactgtttgtataatga 26941346  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||||||| ||||    
T  26941345 catcaaaagttcagtcctcatggtat 26941320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 47481513 - 47481638
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||| |||||||||||||||  |||||       ||| || ||||||||| ||||||||||||||||||||||||||| ||| ||||||| || ||    
T  47481513 ggaaaattttatggtgaagtcataggaatgatgtttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtagaatga 47481612  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||| || |||||||||||    
T  47481613 catcaaaagtttagccctcatagtat 47481638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 42506214 - 42506135
Alignment:
Q  142 taacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||||| |||||||||| |||||||||||| ||| ||| |||||||||| ||||||||||||||||||||||||||||    
T  42506214 taacactataacatcaaaattgtaatgagtaataccccactgtttgtacaatgacatcaaaagttcagtcctcatagtat 42506135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 20373482 - 20373356
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    ||||||||| ||| |||||||||||| |||||       ||| || |||| |||| |||||||||||||||| |||||||||| ||| |||||||||| |    
T  20373482 tggaaaattttatagtgaagtcataagaatgatttttttggtgaagttaatactataacatcaaaaatgtaacgagtaacaccccactgtttgtacaatg 20373383  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||||| ||||| ||||    
T  20373382 acatcaaaagttcagttctcatggtat 20373356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 51213167 - 51213041
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||||||||||||| | |||||       ||| || ||||||||  ||||| |||||||||||||| |||||| ||| |||||||||| |    
T  51213167 tggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactgtaacataaaaaatgtaatgagcaacaccccactgtttgtacaatg 51213068  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
     ||||||||||| ||||||||||||||    
T  51213067 gcatcaaaagttgagtcctcatagtat 51213041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 35844317 - 35844442
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| | |||||       ||| || ||||||||| |||| |||||||||  ||||||||||||||| |||||||||  ||    
T  35844317 ggaaaattctatggtgaagtcatgataatgacttttctggtgaagttaacactataacaacaaaaatgttgtgagtaacacctcactgtttgtacagtga 35844416  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||| ||||| ||||||||    
T  35844417 catcaaaagtttagtccccatagtat 35844442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 48354932 - 48355057
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| | |||||       ||| || ||||||||| || || ||||||||||||||||||||| ||  |||||||||| |     
T  48354932 ggaaaattctatggtgaagtcatgagaatgatttttatggtgaagttaacactataatattaaaaatgtaatgagtaacaccccattgtttgtacaatgg 48355031  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||| ||||||||||    
T  48355032 catcaaaagttcagttctcatagtat 48355057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 218
Target Start/End: Complemental strand, 54828883 - 54828764
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggaca 197  Q
    |||||| |||||||||||||||||||| |       |||||| ||||||||| ||||| ||||||||||||||||||||| ||||||||  |||| ||||    
T  54828883 aaaattttatggtgaagtcataaaaataatttttttggtaaagttaacactataacat-aaaaatgtaatgagtaacaccccaccgtttaaacaacgaca 54828785  T
Q  198 tcaaaagttcagtcctcatag 218  Q
    |||||| |||| || ||||||    
T  54828784 tcaaaaattcattcttcatag 54828764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 221
Target Start/End: Complemental strand, 46297945 - 46297822
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggaca 197  Q
    ||||||||||||||||||||| |||||||       ||| || ||||||||| |||||||||||| || ||||||||||  ||| |||||||||| | |     
T  46297945 aaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacactataacatcaaaaatatagtgagtaacacaccactgtttgtacaatggcg 46297846  T
Q  198 tcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||| | ||||||    
T  46297845 tcaaaagttcagtccccgtagtat 46297822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 21009939 - 21009866
Alignment:
Q  144 acactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcata 217  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||| || |||||||||||||||| |||||||    
T  21009939 acactataacatcaaaaatgtaatgagtaacaccccactatttgtagaatgacatcaaaagttcagccctcata 21009866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 217
Target Start/End: Original strand, 34132926 - 34133047
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||  ||||||||  |||||||       ||| |||||||||||| |  |||||||||||  ||||||||||| ||| |||||||||| ||    
T  34132926 ggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaatga 34133025  T
Q  196 catcaaaagttcagtcctcata 217  Q
    ||||||||||||||||| ||||    
T  34133026 catcaaaagttcagtccccata 34133047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 4015450 - 4015576
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||||||||||||| | |||||       | | || ||||||||| | |||||||| |||  |||||||||||  || ||||||| |  |    
T  4015450 tggaaaattctatggtgaagtcatgagaatgacttttctgatgaagttaacactatagcatcaaaagtgttgtgagtaacacccaactgtttgtagagtg 4015549  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||||||||||||||||    
T  4015550 acatcaaaagttcagtcctcatagtat 4015576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 37157698 - 37157823
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||||||||||||| ||||||        | | || ||||||||| |||||||||| |||| ||||||||||| ||| | |||||||  |    
T  37157698 tggaaaattctatggtgaagtcatgaaaatggcttttttgatgaagttaacactataacatcaaaattgtagtgagtaacaccccactg-ttgtacagtg 37157796  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
     |||||||||||||||| |||||||||    
T  37157797 gcatcaaaagttcagtcatcatagtat 37157823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 217
Target Start/End: Original strand, 39282644 - 39282764
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| |||||||       | |||||||||||||| |||||||||| |||  ||||||| ||| ||| |||| ||||  |     
T  39282644 ggaaaattctatggtgaagtcatgaaaatgatttttctgataaaattaacactataacatcaaaactgt-gtgagtaataccccactgtttatacagtgg 39282742  T
Q  196 catcaaaagttcagtcctcata 217  Q
    ||||||||||||||| ||||||    
T  39282743 catcaaaagttcagttctcata 39282764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 40936027 - 40936113
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtattatcta 227  Q
    ||||||||| | |||||||| |||   |||||||||||||  |||| ||||  |||||||||||||||||||||||||||| |||||    
T  40936027 ttaacactatagcatcaaaagtgttgcgagtaacacctcattgtttatacagtgacatcaaaagttcagtcctcatagtatcatcta 40936113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 22450959 - 22451084
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| | |||||       ||| || | ||||||| | |||||||| |||| |||||| |||||||| |||||||    |     
T  22450959 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcacctcactgtttgtatggtgg 22451058  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||| ||||||||    
T  22451059 catcaaaagttcagtccccatagtat 22451084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 29099391 - 29099471
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| ||||| ||||||||  ||||||||||| ||| |||||||||  |||||| |||||||||||| | ||||||    
T  29099391 ttaacactataacataaaaaatgtcgtgagtaacaccccactgtttgtacagtgacatctaaagttcagtccccttagtat 29099471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 54505844 - 54505923
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| ||||||||||||||||||||||||||| ||   ||| || || |||||||||| ||||| |||||||||||    
T  54505844 ttaacactataacatcaaaaatgtaatgagtaacaccccattatttatagaatgacatcaaaaattcag-cctcatagtat 54505923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 27480565 - 27480439
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||| ||||||||| | |||||       |||||| | ||||||| |||||||||| | ||||||||| || |  |  ||||||||   |    
T  27480565 tggaaaattctatgatgaagtcatgagaatgatatttttggtaaagtcaacactataacatcaaaagtataatgagtagcatccaattgtttgtacggtg 27480466  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||||||| ||||||||    
T  27480465 acatcaaaagttcagtccccatagtat 27480439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 44186641 - 44186561
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| | |||||||| |||  ||||||||||| | | |||| ||||  ||||||||||||||||||| ||||||||    
T  44186641 ttaacactatagcatcaaaagtgttgtgagtaacaccccgctgtttatacagtgacatcaaaagttcagtccccatagtat 44186561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 24708245 - 24708177
Alignment:
Q  151 aacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||||||| || | ||||||||||||||| ||  |||||  |||||||||||||||||| |||||||||    
T  24708245 aacatcaaaactgcagtgagtaacacctcactgt--gtacagtgacatcaaaagttcagtcttcatagtat 24708177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 7327620 - 7327542
Alignment:
Q  143 aacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||| |||||||||| |||  ||||||||||  ||   ||||||||  ||||||||||||||||||| ||||||||    
T  7327620 aacactataacatcaaaagtgttgtgagtaacactccattatttgtacagtgacatcaaaagttcagtccccatagtat 7327542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 53176132 - 53176170
Alignment:
Q  183 gtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  53176132 gtttgtacaataacatcaaaagttcagtcctcatagtat 53176170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 221
Target Start/End: Complemental strand, 46994754 - 46994721
Alignment:
Q  188 tacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||| ||||||||||||||||||||||||||||    
T  46994754 tacaatgacatcaaaagttcagtcctcatagtat 46994721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 41585447 - 41585411
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacc 177  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  41585447 ttaacactataacatcaaaaatataatgagtaacacc 41585411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 96 - 217
Target Start/End: Original strand, 18422647 - 18422768
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||||||||||||||||||||||||||       ||| || ||||||||| |||||||||||| ||| |||||||||| |||||||||||||| ||    
T  18422647 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacaccccaccgtttgtacaatga 18422746  T
Q  196 catcaaaagttcagtcctcata 217  Q
    ||||||||||||||||||||||    
T  18422747 catcaaaagttcagtcctcata 18422768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 15382929 - 15383054
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||||||||||||||| ||||||||||       ||| |||||||||||| ||||||||||||||||||||||||| | |||||||||||||| |     
T  15382929 ggaaaattctatggtgaagttataaaaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatcccaccgtttgtacaatgt 15383028  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||||| || ||||||    
T  15383029 catcaaaagttcagtcatcgtagtat 15383054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 28564916 - 28564836
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  28564916 ttaacactataacatcaaaaatgtaatgagtaacaccttactgtttgtacaatgacatcaaaagttcagtcctcatagtat 28564836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 37451292 - 37451400
Alignment:
Q  106 atggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagt 205  Q
    |||||||||||||||||||||       |||||| ||||||||| ||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||    
T  37451292 atggtgaagtcataaaaatgacttttttggtaaagttaacactataacatcaaaaatgtaataagtaacaccctaccgtttgtacaatgacatcaaaagt 37451391  T
Q  206 tcagtcctc 214  Q
    |||||||||    
T  37451392 tcagtcctc 37451400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 19899949 - 19899824
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||||| |||||       ||| || ||||||||| |||||||||||||||| |||||||||||||| ||||||| || |     
T  19899949 ggaaaattctatggtgaagtcataataatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacacctcactgtttgtagaatgg 19899850  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||  |||||||||||    
T  19899849 catcaaaagttcaaccctcatagtat 19899824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 98 - 221
Target Start/End: Original strand, 15752027 - 15752150
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggaca 197  Q
    ||||||||||||||||||||| | |||||       ||| || ||||||||| ||||| |||||| || ||||||||||||||| |||||||||| | ||    
T  15752027 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatatagtgagtaacacctcactgtttgtacaatggca 15752126  T
Q  198 tcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||||||||||    
T  15752127 tcaaaagttcagtcctcatagtat 15752150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 96 - 231
Target Start/End: Original strand, 32267030 - 32267165
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||| |||||||||||||||| |||||        || || |||||| || ||||||||||||||||||||||||||| ||| |||||||||| ||    
T  32267030 ggaaaattttatggtgaagtcataagaatgactttttttgtgaagttaacaatataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatga 32267129  T
Q  196 catcaaaagttcagtcctcatagtattatctaccca 231  Q
    ||||||||||||| |||||||| ||| ||| |||||    
T  32267130 catcaaaagttcactcctcatattatcatcaaccca 32267165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 225
Target Start/End: Original strand, 23999342 - 23999472
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    ||||||||| |||||||||||||||| |||||       ||| || ||||||||||||||| |||||| ||| |||||||||| |||  |||||| || |    
T  23999342 tggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactacaacataaaaaatataacgagtaacaccccactatttgtagaatg 23999441  T
Q  195 acatcaaaagttcagtcctcatagtattatc 225  Q
    ||||||||||||||| |||||||||||||||    
T  23999442 acatcaaaagttcagccctcatagtattatc 23999472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 30327133 - 30327007
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    ||||||||||||| ||||||||||||||||||        || || ||||||||| ||||||||||||||||||||||| |||  |||||||||||||      
T  30327133 tggaaaattctatagtgaagtcataaaaatgactttttttgtgaatttaacactataacatcaaaaatgtaatgagtaatacccaaccgtttgtacaata 30327034  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
     |||||||||||||||| |||||||||    
T  30327033 gcatcaaaagttcagtcatcatagtat 30327007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 8222127 - 8222249
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||| |||||||||||||||||||        || || ||||||||| ||||||||||||||||||||||||||| ||||||   ||||| |     
T  8222127 ggaaaattctacggtgaagtcataaaaatgacctttttagtgaagttaacactataacatcaaaaatgtaatgagtaacaccacaccgt---tacaatgg 8222223  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||| ||||||||||    
T  8222224 catcaaaagttcagttctcatagtat 8222249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 98 - 221
Target Start/End: Original strand, 28769651 - 28769773
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggaca 197  Q
    ||||||||||||||||||||||||||| |        || || |||||||||  |||||||||||||||||||||||||| |||||||||||||| | ||    
T  28769651 aaaattctatggtgaagtcataaaaataactttttttgtgaagttaacactatgacatcaaaaatgtaatgagtaacacc-caccgtttgtacaatggca 28769749  T
Q  198 tcaaaagttcagtcctcatagtat 221  Q
    ||||| |||| |||||||||||||    
T  28769750 tcaaaggttcggtcctcatagtat 28769773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 39468109 - 39468043
Alignment:
Q  25 gtaatcactattgatagtgaattaatgcctattttgaaaactaatcaacattttaaatatatatttt 91  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||    
T  39468109 gtaatcactattgatagtgaaataatgcctattttgacaactaatcaacattttaaatatatttttt 39468043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 10922768 - 10922848
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| ||||| ||||||||||||||||| ||| ||| |||||||||| ||||||||||||||| ||||||||||||    
T  10922768 ttaacactataacataaaaaatgtaatgagtaagaccccactgtttgtacaatgacatcaaaagttcaatcctcatagtat 10922848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 51128900 - 51128980
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| ||||| ||||||||||||||||||||  |||||||||||||| |||||||||||||||||| | |||||||    
T  51128900 ttaacactataacataaaaaatgtaatgagtaacactccaccgtttgtacaatgacatcaaaagttcagtcattatagtat 51128980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 37619076 - 37618949
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaa--cacctcaccgtttgtacaag 193  Q
    |||||||||||||||||||| |||| |||||       ||| || ||||||||| |||||||||||| ||||||||||  |||| ||| ||||||| ||     
T  37619076 ggaaaattctatggtgaagttataagaatgacttttttggtgaagttaacactataacatcaaaaatttaatgagtaaaacaccccactgtttgtaaaat 37618977  T
Q  194 gacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||| ||||||||||    
T  37618976 gacatcaaaagttcagttctcatagtat 37618949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 219
Target Start/End: Original strand, 2959744 - 2959867
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| |||||||       | | || ||||||||| |||||||||| |||| | ||||||| | ||| |||||||||  ||    
T  2959744 ggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtaagtaacatcccactgtttgtacagtga 2959843  T
Q  196 catcaaaagttcagtcctcatagt 219  Q
    ||||||||||||||||||||||||    
T  2959844 catcaaaagttcagtcctcatagt 2959867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 30254420 - 30254544
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||||||||||||||| |||| |||||       | | || |||||| || ||||||||||||||||||||||| ||  ||| |||||||||| ||    
T  30254420 ggaaaattctatggtgaagttataagaatgacttttttgttgaagttaacaatataacatcaaaaatgtaatgagtaataca-cactgtttgtacaatga 30254518  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||||||||| |||||    
T  30254519 catcaaaagttcagtcctcaaagtat 30254544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 27763445 - 27763366
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| ||||||||||||||||||||||||||| ||  ||||||| || |||||||||||| ||| |||||||||||    
T  27763445 ttaacactataacatcaaaaatgtaatgagtaacacc-catagtttgtagaatgacatcaaaagtccagccctcatagtat 27763366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 32216096 - 32216176
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| ||||||||||||||| ||||||||||  ||| |||||||||| | | ||||||||||||||||| ||||||    
T  32216096 ttaacactataacatcaaaaatgtagtgagtaacacaccactgtttgtacaatggcgtcaaaagttcagtcctcgtagtat 32216176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 39446724 - 39446673
Alignment:
Q  44 aattaatgcctattttgaaaactaatcaacattttaaatatatattttatgt 95  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  39446724 aattaatgcctattttgacaactaatcaacattttaaatatattttttatgt 39446673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 221
Target Start/End: Original strand, 42721026 - 42721160
Alignment:
Q  87 attttatgtggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgttt 186  Q
    ||||||| |||||||||||||||||||||||| |||||||       ||| || ||| | ||| | ||| |||||| || ||||||||||| ||| ||||    
T  42721026 attttatatggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttagccctatatcataaaaaatatagtgagtaacaccccactgttt 42721125  T
Q  187 gtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||   |||||||||||||| ||| ||||||||    
T  42721126 gtacagtaacatcaaaagttcaatccccatagtat 42721160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 1547283 - 1547408
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| | |||||       ||| || ||||||||| ||||| ||||||||  ||||||||||  ||| |||||| ||  |     
T  1547283 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgttgtgagtaacactccactgtttgtgcagtgg 1547382  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||| ||||||||||    
T  1547383 catcaaaagttcagttctcatagtat 1547408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 10182188 - 10182063
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| |||||||       ||| || |||| |||  ||||| |||||| || || |||||||  ||| |||||||||  |     
T  10182188 ggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactgtaacataaaaaatatagtgcgtaacacgccactgtttgtacagtgg 10182089  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||||||||||||    
T  10182088 catcaaaagttcagtcctcatagtat 10182063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 46931452 - 46931528
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcata 217  Q
    ||||||||| ||||||||||||||||||||||| ||| ||| ||||||| || | |||||||| ||||| |||||||    
T  46931452 ttaacactataacatcaaaaatgtaatgagtaataccccactgtttgtagaacggcatcaaaaattcagccctcata 46931528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 7079168 - 7079118
Alignment:
Q  171 taacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||||||||    
T  7079168 taacacctcactgtttgtacaatgacatcaaaagttcagtcatcatagtat 7079118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 3309143 - 3309268
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||||| ||||||| | |||||       |||||| ||||||||| |||||||||| |||  ||||||||||| ||| |||||||||  |    
T  3309143 tggaaaattctatggtaaagtcatgagaatgacttttctggtaaagttaacactataacatcaaaagtgttgtgagtaacacc-cactgtttgtacagtg 3309241  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
      |||||||||||| || |||||||||    
T  3309242 gtatcaaaagttcaatcttcatagtat 3309268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 3534973 - 3535057
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtattatc 225  Q
    ||||||||| |||||||||| |||  |||||||||||| || |||||| ||  ||||||||||||||||||| | || |||||||    
T  3534973 ttaacactataacatcaaaagtgttgtgagtaacaccttactgtttgtgcagtgacatcaaaagttcagtccccttaatattatc 3535057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 9903189 - 9903113
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcata 217  Q
    ||||||||| |||||||||| |||| ||||||||||| | | |||||||||  ||||||||||||||| ||| ||||    
T  9903189 ttaacactataacatcaaaactgtagtgagtaacaccccgctgtttgtacagtgacatcaaaagttcaatccacata 9903113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 217
Target Start/End: Complemental strand, 34012557 - 34012436
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| |||||||       | | || ||||||||| |||||||| | |||| ||||||||||  ||| ||||||| |  |     
T  34012557 ggaaaattctatggtgaagtcatgaaaatgacgtttatgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaagtgg 34012458  T
Q  196 catcaaaagttcagtcctcata 217  Q
    |||||||||||||||| |||||    
T  34012457 catcaaaagttcagtcatcata 34012436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 48620678 - 48620758
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||| || |||||||||| |||  ||||||||||| ||| |||||||||  ||||||||||||||||||| | ||||||    
T  48620678 ttaacaatataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtgacatcaaaagttcagtccccttagtat 48620758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 25160711 - 25160753
Alignment:
Q  179 caccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||| | ||||||||||||||||||||||||||    
T  25160711 caccgtttgtacaatggcatcaaaagttcagtcctcatagtat 25160753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 38823209 - 38823335
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||||||||||||| | |||||       ||| || ||||||||| | |||||||| |||   |||||||||| |||  ||||||||  |    
T  38823209 tggaaaattctatggtgaagtcatgagaatgacttttctggttaagttaacactatagcatcaaaattgttgcgagtaacaccccactatttgtacagtg 38823308  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
     ||||||||||||| ||| ||||||||    
T  38823309 tcatcaaaagttcaatccccatagtat 38823335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 238631 - 238568
Alignment:
Q  157 aaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||  ||||||||| | ||| |||||||||| ||||||||||||||||||| ||||||||    
T  238631 aaaaatgttgtgagtaacatc-cactgtttgtacaatgacatcaaaagttcagtccccatagtat 238568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 21289729 - 21289793
Alignment:
Q  157 aaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| ||||||||||| ||| |||||||||  | |||||||||||||||||  |||||||    
T  21289729 aaaaatgtagtgagtaacaccccactgtttgtacagtggcatcaaaagttcagtccctatagtat 21289793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 27227587 - 27227540
Alignment:
Q  174 cacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||||| |||||||||  | ||||||||||||||||||||||||||    
T  27227587 cacctcactgtttgtacagtggcatcaaaagttcagtcctcatagtat 27227540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 47279243 - 47279310
Alignment:
Q  154 atcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||| |||  ||||||||||| ||| |||||||||  | |||| |||||||||||||||||||||    
T  47279243 atcaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcgaaagttcagtcctcatagtat 47279310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 16415641 - 16415767
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaaca-cctcaccgtttgtacaagg 194  Q
    ||||||||||| ||||||||||| | |||||       ||| || ||||||||| | |||||||| |||| ||||||||| ||| |  |||||||||  |    
T  16415641 ggaaaattctaaggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccctaaatgtttgtacagtg 16415740  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
     |||||||||||||| | |||||||||    
T  16415741 gcatcaaaagttcagccatcatagtat 16415767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 4e-31; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 37905708 - 37905833
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    ||||||||||||||||||||| ||||||||||       ||| || ||||||||| ||||| |||||||||| |||||||||| |||||||||||||| |    
T  37905708 tggaaaattctatggtgaagttataaaaatgatttttt-ggtgaagttaacactataacataaaaaatgtaacgagtaacaccccaccgtttgtacaatg 37905806  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||||||||||||||||    
T  37905807 acatcaaaagttcagtcctcatagtat 37905833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 11366584 - 11366459
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||||||||||||| |||||| |||||       ||| |||||||||||| ||||||||||||||||||||||||| |||||  |||||| || ||    
T  11366584 ggaaaattctatggtgaaatcataagaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatctcactatttgtataatga 11366485  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||| |||||||||||    
T  11366484 catcaaaagttcagccctcatagtat 11366459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 43648403 - 43648323
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||| |||||||||    
T  43648403 ttaacactataacatcaaaaatgtaatgagtaacacctcactgtttgtataatgacatcaaaagttcagtcatcatagtat 43648323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 33551190 - 33551064
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||| ||||||||||| | |||||        || || ||||||||| ||||||||||||||| ||||||||||| ||| |||||||||| |    
T  33551190 tggaaaattctacggtgaagtcatgagaatgacttttttagtgaagttaacactataacatcaaaaatgtagtgagtaacaccccactgtttgtacaatg 33551091  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||| ||| |||||||||    
T  33551090 acatcaaaagttcggtcttcatagtat 33551064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 221
Target Start/End: Original strand, 36641988 - 36642111
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggaca 197  Q
    ||||||||||||||||||||| | |||||       ||| ||||||| |||| | |||||||| |||   |||||||||||||| |||||||||  ||||    
T  36641988 aaaattctatggtgaagtcatgagaatgacttttctggtgaaattaatactatagcatcaaaagtgttgcgagtaacacctcactgtttgtacagtgaca 36642087  T
Q  198 tcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||||||||||    
T  36642088 tcaaaagttcagtcctcatagtat 36642111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 225
Target Start/End: Complemental strand, 4264280 - 4264151
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| | |||||       |||||| ||||||||| | |||||||| |||  ||||||||| | ||| |||||||||  ||    
T  4264280 ggaaaattctatggtgaagtcatcataatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgagtaacatcccactgtttgtacagtga 4264181  T
Q  196 catcaaaagttcagtcctcatagtattatc 225  Q
    ||||||||||||||||  ||||||||||||    
T  4264180 catcaaaagttcagtctccatagtattatc 4264151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 39167495 - 39167441
Alignment:
Q  167 tgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  39167495 tgagtaacacctcactgtttgtacaatgacatcaaaagttcagtcctcatagtat 39167441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 209
Target Start/End: Original strand, 35958908 - 35959022
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||| |||||||||||||||||       ||| || ||  ||||| ||||| |||||||||||||| |||||| ||| |||||||||| |    
T  35958908 tggaaaattctatgatgaagtcataaaaatgacttttttggtgaagttgccactataacataaaaaatgtaatgagcaacaccccactgtttgtacaatg 35959007  T
Q  195 acatcaaaagttcag 209  Q
    |||| ||||||||||    
T  35959008 acattaaaagttcag 35959022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 19289481 - 19289401
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| |||||||||||| |||||||||||||| ||  |||||||||| ||||||||||||| ||| |||| |||||    
T  19289481 ttaacactataacatcaaaaatataatgagtaacaccccattgtttgtacaatgacatcaaaagttaagttctcacagtat 19289401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 210
Target Start/End: Original strand, 26357576 - 26357691
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    ||||||||| |||||||||||||| |||||||       | | || ||||||||| |||||||||| |||| ||||||||| | ||| |||||||||  |    
T  26357576 tggaaaattttatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtgagtaacatcccactgtttgtacagtg 26357675  T
Q  195 acatcaaaagttcagt 210  Q
    ||||||||||||||||    
T  26357676 acatcaaaagttcagt 26357691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 221
Target Start/End: Complemental strand, 33660569 - 33660446
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggaca 197  Q
    ||||||||||||||||||||| |||||||        || || ||||||||| |||||||||| |||  |||||||||||  || |||||||||  | ||    
T  33660569 aaaattctatggtgaagtcattaaaatgacttttctagttaagttaacactataacatcaaaagtgttgtgagtaacacccaactgtttgtacagtggca 33660470  T
Q  198 tcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||| ||||||    
T  33660469 tcaaaagttcagtcctcttagtat 33660446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 2325528 - 2325448
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||| || ||||||| ||||||| ||||||||||| ||  |||||||||  | ||||||||||||||||||||||||||    
T  2325528 ttaacaatataacatcataaatgtattgagtaacaccccattgtttgtacactggcatcaaaagttcagtcctcatagtat 2325448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 3176984 - 3177064
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||| |||| || |||||||||||  ||||||||||   || |||||||||| ||||||||||||||||||||||||||||    
T  3176984 ttaatactataatatcaaaaatgttttgagtaacacgcaactgtttgtacaatgacatcaaaagttcagtcctcatagtat 3177064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 4166922 - 4167047
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||  |||||||       ||| || |||||| || |  ||||||||| |  ||||||||||| ||| |||||||||| |     
T  4166922 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacattatagtatcaaaaatattgtgagtaacaccccactgtttgtacaatgg 4167021  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||| ||||||||    
T  4167022 catcaaaagttcagtccccatagtat 4167047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 27350096 - 27350025
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcc 212  Q
    ||||||||| | ||||||||||||  ||||||||||| ||| |||||||||  |||||||||||||||||||    
T  27350096 ttaacactatagcatcaaaaatgttgtgagtaacaccacactgtttgtacagtgacatcaaaagttcagtcc 27350025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 4478367 - 4478494
Alignment:
Q  95 tggaaaattctatggtgaagtcata-aaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaag 193  Q
    ||||||||||||| ||||||||||| |||||||       ||| || ||||||||| |||||||||| |||  ||||||||||  ||  |||||||||      
T  4478367 tggaaaattctatagtgaagtcatagaaaatgatatttttggtgaagttaacactataacatcaaaagtgttgtgagtaacactccattgtttgtacagt 4478466  T
Q  194 gacatcaaaagttcagtcctcatagtat 221  Q
    | ||||||||||| ||||||||||||||    
T  4478467 ggcatcaaaagtttagtcctcatagtat 4478494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 33902121 - 33902191
Alignment:
Q  151 aacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||| ||||||||| ||||||| ||| ||| ||||||| || |||||||||||||||||||||| |||||    
T  33902121 aacataaaaaatgtagtgagtaataccccactgtttgtaaaatgacatcaaaagttcagtcctcaaagtat 33902191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 221
Target Start/End: Complemental strand, 41464051 - 41463928
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggaca 197  Q
    ||||||||||||||||||| | | |||||       ||| || |||| |||| || ||||||| |||  ||||||||||||||| |||||||||  | ||    
T  41464051 aaaattctatggtgaagtcgtgagaatgacatttttggtgaagttaatactataaaatcaaaagtgttgtgagtaacacctcactgtttgtacagtggca 41463952  T
Q  198 tcaaaagttcagtcctcatagtat 221  Q
    ||||||||||| ||||||||||||    
T  41463951 tcaaaagttcaatcctcatagtat 41463928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 205
Target Start/End: Complemental strand, 17054299 - 17054190
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||||||||||||||||||   |||||       ||| || |||| |||| ||||||||||||||| | ||||||| ||||  |||||||||| ||    
T  17054299 ggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaatactataacatcaaaaatgtagtaagtaacatctcattgtttgtacaatga 17054200  T
Q  196 catcaaaagt 205  Q
    ||||||||||    
T  17054199 catcaaaagt 17054190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 17071940 - 17071815
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||||||||||||||||||   |||||       ||| || ||||||||| |||| |||||||||| | ||||||| ||||   ||||||||| ||    
T  17071940 ggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaacactataacaacaaaaatgtagtaagtaacatctcattatttgtacaatga 17071841  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    |||||||||||| ||  |||||||||    
T  17071840 catcaaaagttcggtattcatagtat 17071815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 29242341 - 29242216
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| ||||||        ||| || |||| |||| ||||| |||||| || || |||||||| ||| |||||||||  |     
T  29242341 ggaaaattctatggtgaagtcatgaaaatggtttttttggtgaagttaaaactataacataaaaaatatagtgcgtaacaccccactgtttgtacagtgg 29242242  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
     ||||||||||||||| |||||||||    
T  29242241 tatcaaaagttcagtcttcatagtat 29242216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 221
Target Start/End: Original strand, 13711465 - 13711589
Alignment:
Q  97 gaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggac 196  Q
    |||||||||||||||||||||| | |||||       ||| || |||||| || | |||||||| |||  ||||||||||| ||| |||||||||  |||    
T  13711465 gaaaattctatggtgaagtcatcagaatgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccccacagtttgtacagtgac 13711564  T
Q  197 atcaaaagttcagtcctcatagtat 221  Q
    |||||||||| ||||| ||| ||||    
T  13711565 atcaaaagtttagtccacatggtat 13711589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 4763678 - 4763756
Alignment:
Q  143 aacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||| | || ||||| |||| ||||||||||| ||| |||||||||  ||||||||||||||||| | ||||||||    
T  4763678 aacactatatcaacaaaactgtagtgagtaacaccccactgtttgtacagtgacatcaaaagttcagttcccatagtat 4763756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 19313851 - 19313969
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||||||||||||| | |||||       ||| || |||||| || | |||||||| |||  |||||||||||| ||  ||| ||||  |    
T  19313851 tggaaaattctatggtgaagtcattagaatgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccttactatttatacagtg 19313950  T
Q  195 acatcaaaagttcagtcct 213  Q
    |||||||||||||||||||    
T  19313951 acatcaaaagttcagtcct 19313969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 33709390 - 33709310
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| |||||||||| |||   |||||||||  ||| ||| |||||  ||||||||||||||||||| ||||||||    
T  33709390 ttaacactataacatcaaaagtgttgcgagtaacactccactgttagtacagtgacatcaaaagttcagtccccatagtat 33709310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 212
Target Start/End: Complemental strand, 43771039 - 43770926
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggaca 197  Q
    ||||||||||||||||||||| | |||||       ||| || ||||||||| |||||||||| |||  ||||||||||| ||| |||| ||||  | ||    
T  43771039 aaaattctatggtgaagtcattagaatgatttttt-ggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttatacagtggca 43770941  T
Q  198 tcaaaagttcagtcc 212  Q
    |||||||||||||||    
T  43770940 tcaaaagttcagtcc 43770926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 19424786 - 19424706
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| |||||||||| |||  ||||||||||| ||  |||| || |  | ||||||||||| ||||||||||||||    
T  19424786 ttaacactataacatcaaaagtgttgtgagtaacaccccattgtttatatagtggcatcaaaagtttagtcctcatagtat 19424706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 1150296 - 1150171
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||||| |||||       ||| || ||||| ||| ||||||||||||||||||||||||| | ||| |||||||||| ||    
T  1150296 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacgctataacatcaaaaatgtaatgagtaacatcccactgtttgtacaacga 1150197  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||||| |||||||||    
T  1150196 catcaaaagttcagtcatcatagtat 1150171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 37970704 - 37970585
Alignment:
Q  102 ttctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaa 201  Q
    ||||||||||||||||| | |||||       ||| || ||||||||| ||||||||||||||||||||||||||| ||| |||||||||| | ||||||    
T  37970704 ttctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatgccatcaa 37970605  T
Q  202 aagttcagtcctcatagtat 221  Q
    |||||||| |||||||||||    
T  37970604 aagttcagccctcatagtat 37970585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 10555394 - 10555268
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||| ||||||||||| | |||||       ||| || ||||||||| ||||| ||||||||||||||||||||  ||| |||||||||| |    
T  10555394 tggaaaattctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacactccactgtttgtacaatg 10555295  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||| ||||||||||||    
T  10555294 acatcaaaagttcaatcctcatagtat 10555268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 225
Target Start/End: Original strand, 13307621 - 13307751
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||||||||||||| | |||||       ||| || ||||||||| |||||||||| |||  |||||||||||||||  ||||||||  |    
T  13307621 tggaaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacctcactatttgtacagtg 13307720  T
Q  195 acatcaaaagttcagtcctcatagtattatc 225  Q
    |||||||||||||||||| ||||||||||||    
T  13307721 acatcaaaagttcagtccccatagtattatc 13307751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 1204971 - 1205051
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| ||||| ||||||||| |||||||||| |||| |||||||||| ||||||||||||||||||||||||||||    
T  1204971 ttaacactataacataaaaaatgtagtgagtaacacatcactgtttgtacaatgacatcaaaagttcagtcctcatagtat 1205051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 23854623 - 23854497
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    ||||||| |||| ||||||||||| | |||||       ||| || ||||||||| ||||| |||||||||||||||||||||  || |||||| ||| |    
T  23854623 tggaaaagtctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacccaactgtttgtgcaatg 23854524  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||||||||||||||||    
T  23854523 acatcaaaagttcagtcctcatagtat 23854497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 36695157 - 36695032
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||  |||||||       | | || ||||||||| || |||||||||||  ||||||||||| ||| |||||||||| ||    
T  36695157 ggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatga 36695058  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||| ||||||||    
T  36695057 catcaaaagttcagtccccatagtat 36695032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 43643786 - 43643661
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| | |||||       ||| || ||||||||| ||||||||||||||||||||||||||   || |||||||||| ||    
T  43643786 ggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaatga 43643687  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    |||| |||||||| || |||||||||    
T  43643686 catccaaagttcaatcttcatagtat 43643661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 6098710 - 6098584
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||||||||||||| ||||| |       ||| || |||| |||| | |||||||||| || ||||||||||| ||| |||||||||  |    
T  6098710 tggaaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactatagcatcaaaaatatagtgagtaacaccccactgtttgtacagtg 6098611  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||||||| ||||||||    
T  6098610 acatcaaaagttcagtccccatagtat 6098584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 217
Target Start/End: Complemental strand, 16447066 - 16446945
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| |||||||       | |||| ||||||||| |||||||||| |||| ||||||||||| ||| ||||||| || |     
T  16447066 ggaaaattctatggtgaagtcatgaaaatgacttttctgataaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtataatgg 16446967  T
Q  196 catcaaaagttcagtcctcata 217  Q
    ||||||||||| ||||| ||||    
T  16446966 catcaaaagtttagtccccata 16446945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 30654774 - 30654649
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||| |||||||||||||||| | |||       ||| || ||||||||| ||||| ||||||||||||||||||||| ||| ||||||  || ||    
T  30654774 ggaaaattttatggtgaagtcataagagtgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgttgaatga 30654675  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||| | |||||||||    
T  30654674 catcaaaagttcagccttcatagtat 30654649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 12876107 - 12876233
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||||| ||||||  |||||||       | | || ||||||||| || || ||||||||  |||||||||||  || |||||||||| |    
T  12876107 tggaaaattctatggttaagtcacgaaaatgacttttctgatgaagttaacactataatataaaaaatgttgtgagtaacacccaactgtttgtacaatg 12876206  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||||||||||||||||    
T  12876207 acatcaaaagttcagtcctcatagtat 12876233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 1149762 - 1149698
Alignment:
Q  157 aaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||||| | ||| |||||||||| |||||||||||||| |||||||||||||    
T  1149762 aaaaatgtaatgagtaacaacccactgtttgtacaatgacatcaaaagttctgtcctcatagtat 1149698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 217
Target Start/End: Original strand, 9864147 - 9864268
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||  ||||||||  |||||||       ||| |||||||||||| |  |||||||||||  ||||||||||| ||| |||||||||| ||    
T  9864147 ggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaatga 9864246  T
Q  196 catcaaaagttcagtcctcata 217  Q
    ||||||||||||||||| ||||    
T  9864247 catcaaaagttcagtccccata 9864268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 8803956 - 8803888
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcag 209  Q
    ||||||||| ||||||||||||||||||||||||||  |||  |||||| || ||||||||||||||||    
T  8803956 ttaacactataacatcaaaaatgtaatgagtaacactccactatttgtagaatgacatcaaaagttcag 8803888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 16222907 - 16222987
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| ||||| |||||| || ||||||   || ||| |||||||||| ||||||||||||||||||||||||||||    
T  16222907 ttaacactataacataaaaaatatagtgagtagttccccacagtttgtacaatgacatcaaaagttcagtcctcatagtat 16222987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 27083029 - 27082904
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| | | |||       ||| || ||||||||| | |||||||| |||| ||||||||||| ||| |||||| ||  |     
T  27083029 ggaaaattctatggtgaagtcatcagactgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccccactgtttgtgcagtgg 27082930  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||| ||||||||||||||||||||||    
T  27082929 cattaaaagttcagtcctcatagtat 27082904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 31934032 - 31933952
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||||||  | ||||||||| |||||||||||||| |||  ||| ||||| |||||||||||||||||| | |||||||    
T  31934032 ttaacactatgatatcaaaaatataatgagtaacaccccactctttatacaatgacatcaaaagttcagtcattatagtat 31933952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 217
Target Start/End: Original strand, 34894966 - 34895087
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| |||||||       | | || ||||||||| |||||||| | |||| ||||||||||  ||| ||||||| |  |     
T  34894966 ggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaagtgg 34895065  T
Q  196 catcaaaagttcagtcctcata 217  Q
    |||||||||||||||| |||||    
T  34895066 catcaaaagttcagtcatcata 34895087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 34952222 - 34952106
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||||||| || ||||||| |||||||       ||| || ||||||||| | |||||||| |||  ||||||||| | ||| |||||||||  ||    
T  34952222 ggaaaattctatagtaaagtcattaaaatgacttttctggtcaagttaacactatatcatcaaaagtgttgtgagtaacagcccactgtttgtacagtga 34952123  T
Q  196 catcaaaagttcagtcc 212  Q
    |||||||||||||||||    
T  34952122 catcaaaagttcagtcc 34952106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 221
Target Start/End: Original strand, 465843 - 465966
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggaca 197  Q
    |||||| |||||||||||||| |||||||       ||| || ||||||| | |||||||||| |||  ||||||||||| ||| |||||||||  | ||    
T  465843 aaaattttatggtgaagtcattaaaatgacttttgtggtgaagttaacacgataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtggca 465942  T
Q  198 tcaaaagttcagtcctcatagtat 221  Q
    |||||| |||||||| | ||||||    
T  465943 tcaaaaattcagtccccttagtat 465966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 41362517 - 41362639
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||||||||||||||| || |||||||       ||| || |||||||||   ||| ||||||||| ||||||||||| |||  |||||| |  ||    
T  41362517 ggaaaattctatggtgaagttatgaaaatgacttttttggtgaagttaacactag--cat-aaaaatgtagtgagtaacaccccactatttgtatagtga 41362613  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||| |||||||||||    
T  41362614 catcaaaagttcagacctcatagtat 41362639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 38643977 - 38644102
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||||||||||||| |||| | |||||       ||| || ||||||||| |||||||||| |||  ||||||||||| ||| ||||||  |  |     
T  38643977 ggaaaattctatggtgaaatcatgagaatgacttttttggtcaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 38644076  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||  ||||||||    
T  38644077 catcaaaagttcagtctccatagtat 38644102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 40862463 - 40862534
Alignment:
Q  141 ttaacactacaacatcaaaaa-tgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtc 211  Q
    ||||||||| || |||||||| |||  ||||||||||| ||| |||||||||| | ||||||||||||||||    
T  40862463 ttaacactataatatcaaaaaatgttgtgagtaacaccccactgtttgtacaatggcatcaaaagttcagtc 40862534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 15009235 - 15009306
Alignment:
Q  90 ttatgtggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaa 161  Q
    |||| |||||||||||||||||||||||||| |||||       ||| || ||||||||| |||||||||||    
T  15009235 ttatttggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaa 15009306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 4133130 - 4133077
Alignment:
Q  167 tgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagta 220  Q
    ||||||| |||| || |||||||||  | |||||||||||||||||||||||||    
T  4133130 tgagtaatacctgactgtttgtacagtggcatcaaaagttcagtcctcatagta 4133077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 11727068 - 11727144
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcata 217  Q
    ||||||||| |||||||||| |||  | ||||||||| |||  |||||| |  | ||||||||||||||||||||||    
T  11727068 ttaacactataacatcaaaagtgttgtaagtaacaccccactatttgtatagtggcatcaaaagttcagtcctcata 11727144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 214
Target Start/End: Complemental strand, 31705785 - 31705668
Alignment:
Q  97 gaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggac 196  Q
    ||||||||||||||||||||||||||||||       ||| || ||||||||| |||||||||||||||| ||||||||||  ||||||||||||| |||    
T  31705785 gaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacaccctaccgtttgtacaatgac 31705686  T
Q  197 atcaaaagttcagtcctc 214  Q
    ||||||||| ||||||||    
T  31705685 atcaaaagtccagtcctc 31705668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 24886149 - 24886229
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||| |||| ||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||    
T  24886149 ttaatactataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatgacatcaaaagttcagtcctcatagtat 24886229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 14919658 - 14919578
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||| || ||||||||||||||||||||||||||||||| |||| || || ||||||||||||||||||||||||||||    
T  14919658 ttaacattataacatcaaaaatgtaatgagtaacacctcactgtttatataatgacatcaaaagttcagtcctcatagtat 14919578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 35826658 - 35826533
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| | |||||        || || |||| |||| ||||||||||||||| |||||||||| |||  |||||||||  ||    
T  35826658 ggaaaattctatggtgaagtcatgataatgactttttttgtgaagttaatactataacatcaaaaatgtactgagtaacacttcattgtttgtacagtga 35826559  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||||||||||||    
T  35826558 catcaaaagttcagtcctcatagtat 35826533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 5829956 - 5830026
Alignment:
Q  151 aacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||| |||||||||||||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||    
T  5829956 aacataaaaaatgtaatgagtaacaccctaccgtttgtacaatgacatcaaaagtttagtcctcatagtat 5830026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 96 - 217
Target Start/End: Original strand, 22255181 - 22255303
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaa-atgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||| |||| ||||||||||||||||| |       ||| || |||||| || |||||||||| ||||||||||||||||| |||||||||||||| |    
T  22255181 ggaaaactctacggtgaagtcataaaaataacttttttggtgaagttaacattataacatcaaaaaatgtaatgagtaacaccccaccgtttgtacaatg 22255280  T
Q  195 acatcaaaagttcagtcctcata 217  Q
     ||||||||||||||| ||||||    
T  22255281 gcatcaaaagttcagttctcata 22255303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 36860423 - 36860548
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||  |||||||       ||| || ||||||||| |  || ||||||||  ||||||||||| ||| |||||||||| ||    
T  36860423 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactatagtataaaaaatgttgtgagtaacaccccactgtttgtacaatga 36860522  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||| ||||||||    
T  36860523 catcaaaagttcagtccccatagtat 36860548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 96 - 207
Target Start/End: Complemental strand, 17158208 - 17158094
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnng---gtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaa 192  Q
    |||||||||||||||||||||||||||||||           || || ||||||||| ||||| ||||||||||||||||||||  ||||||||||||||    
T  17158208 ggaaaattctatggtgaagtcataaaaatgatttttttttttgtgaagttaacactataacataaaaaatgtaatgagtaacactccaccgtttgtacaa 17158109  T
Q  193 ggacatcaaaagttc 207  Q
     ||||||||||||||    
T  17158108 tgacatcaaaagttc 17158094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 221
Target Start/End: Complemental strand, 43308787 - 43308702
Alignment:
Q  135 gtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||| |||||| || ||||||||||||||||||| ||||||| ||| ||| |||||| | ||||||||||||||||||||||||||    
T  43308787 gtaaagttaacattataacatcaaaaatgtaatgaataacacc-cactgttcgtacaatggcatcaaaagttcagtcctcatagtat 43308702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 7693229 - 7693355
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||||||||||||| |||||||       ||| || ||||||||| |||||||||| |||  ||||||||| | ||| |||||||||  |    
T  7693229 tggaaaattctatggtgaagtcattaaaatgacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacatcccactgtttgtacagtg 7693328  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
     ||||||||||||| ||||| ||||||    
T  7693329 gcatcaaaagttcaatcctcttagtat 7693355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 36866761 - 36866887
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||||||||||||  |||||||       ||| || ||||||||| || ||||||||| |  ||||||||||| ||| |||||||||| |    
T  36866761 tggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactataatatcaaaaatattgtgagtaacaccccactgtttgtacaatg 36866860  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
     |||||||||||||||||  |||||||    
T  36866861 gcatcaaaagttcagtcccgatagtat 36866887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 5112488 - 5112363
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||| |||||||||||||| |||||||       ||| || |||| |||| ||||| |||||| || ||||||||||| ||| |||||||||  |     
T  5112488 ggaaaattttatggtgaagtcatgaaaatgacttttttggtgaagttaatactataacataaaaaatatagtgagtaacaccccactgtttgtacagtgg 5112389  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||| ||||||||    
T  5112388 catcaaaagttcagtccccatagtat 5112363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 9200233 - 9200358
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||| |||||||||||||| ||||| |       ||| || ||||||||| |||||||||| |||  ||||||||||| ||| |||||||||  ||    
T  9200233 ggaaaattttatggtgaagtcattaaaataacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccacagtttgtacagtga 9200332  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||| ||||||| ||||||    
T  9200333 catcaaaagtttagtcctcttagtat 9200358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 12910350 - 12910480
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtaca---- 191  Q
    ||||||||||||||||||||||| |||||||       ||| || |||| |||| |||||||||||| || || |||||||| ||| |||||||||        
T  12910350 ggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactataacatcaaaaatatagtgcgtaacaccccactgtttgtacagtac 12910449  T
Q  192 ag-gacatcaaaagttcagtcctcatagtat 221  Q
    || ||||||||||||||||||||||||||||    
T  12910450 agtgacatcaaaagttcagtcctcatagtat 12910480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 217
Target Start/End: Complemental strand, 22974257 - 22974136
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||||||||||||||| || | |||||       ||| || ||||||||| ||||||||||| ||||||||||||| | ||| ||||||||||  |    
T  22974257 ggaaaattctatggtgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaaaagtaatgagtaacatcccactgtttgtacaataa 22974158  T
Q  196 catcaaaagttcagtcctcata 217  Q
    ||||||||||||| | ||||||    
T  22974157 catcaaaagttcaattctcata 22974136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 30969454 - 30969374
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| |||||||||| |||  ||||||||||| |||  ||| ||||| ||||||||||||||||||||||||||||    
T  30969454 ttaacactataacatcaaaagtgttgtgagtaacaccccactatttatacaatgacatcaaaagttcagtcctcatagtat 30969374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 38528411 - 38528287
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| ||||||        | | || ||||||||| |||||||||| |||||||||||||||| ||  |||| ||||  ||    
T  38528411 ggaaaattctatggtgaagtcatgaaaatggtttttctgatgaagttaacactataacatcaaaattgtaatgagtaacaccccattgtttatacagtga 38528312  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||| ||||||||||    
T  38528311 catcaaaagttcagt-ctcatagtat 38528287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 27330351 - 27330429
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| |||||||||| |||  |||||||||||| || |||||||||| | |||||||||||||||| |||||||||    
T  27330351 ttaacactataacatcaaaagtgt--tgagtaacaccttactgtttgtacaatggcatcaaaagttcagtcttcatagtat 27330429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 1429320 - 1429195
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||| |||||||||||||||| |||||||       ||| || ||||||||| | |||||||||| || ||||||||||| ||| |||||||||  |     
T  1429320 ggaaaaatctatggtgaagtcatgaaaatgactcttttggtgaagttaacactatagcatcaaaaatatagtgagtaacaccccactgtttgtacactgg 1429221  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    |||||||| |||||||  ||||||||    
T  1429220 catcaaaaattcagtctccatagtat 1429195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 27318617 - 27318537
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| ||||| ||||||||| ||||||||||  ||| |||||||||| ||||||||||||| ||| |||| |||||    
T  27318617 ttaacactaaaacataaaaaatgtagtgagtaacacaccactgtttgtacaatgacatcaaaagtttagttctcacagtat 27318537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 221
Target Start/End: Complemental strand, 25501112 - 25500976
Alignment:
Q  85 atattttatgtggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgt 184  Q
    |||||||||  | ||||||||||||||||||||| | |||||       |||||| ||||||||| | |||||||| |||  ||| ||||||||||| ||    
T  25501112 atattttattagaaaaattctatggtgaagtcatgagaatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgaataacacctcactgt 25501013  T
Q  185 ttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||||  | ||||||||||| |||||  |||||||    
T  25501012 ttgtacactgccatcaaaagttaagtccctatagtat 25500976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 35504427 - 35504490
Alignment:
Q  158 aaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||||| || | |||||||    
T  35504427 aaaatgtaatgagtaacacctcaccgtttgtatgatgacatcaaaagttcaatcattatagtat 35504490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 219
Target Start/End: Original strand, 19119859 - 19119982
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| | |||||       ||| || ||||||||| | |||||||| |||    ||||||||| ||| |||||||||  ||    
T  19119859 ggaaaattctatggtgaagtcatgagaatgacttttgtggtgaagttaacactatagcatcaaaagtgttgctagtaacaccccactgtttgtacagtga 19119958  T
Q  196 catcaaaagttcagtcctcatagt 219  Q
    ||||||||||||||||| ||||||    
T  19119959 catcaaaagttcagtccccatagt 19119982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 32563150 - 32563265
Alignment:
Q  97 gaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggac 196  Q
    |||||||||||||||||||||| |||||||       | | || ||||||||| |||||||||| |||  ||||||||||  ||| || ||||||  |||    
T  32563150 gaaaattctatggtgaagtcattaaaatgatttttctgatgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtctgtacagtgac 32563249  T
Q  197 atcaaaagttcagtcc 212  Q
    ||||||||||||||||    
T  32563250 atcaaaagttcagtcc 32563265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 217
Target Start/End: Original strand, 40133384 - 40133506
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||||||||||||  |||||||       ||| || |||||| || |  |||||||||||  ||||||||||| |||  ||||||||| |    
T  40133384 tggaaaattctatggtgaagtcacgaaaatgacttttgtggtgaagttaacattatagtatcaaaaatgttgtgagtaacaccccactatttgtacaatg 40133483  T
Q  195 acatcaaaagttcagtcctcata 217  Q
     ||||||||||||||||| ||||    
T  40133484 gcatcaaaagttcagtccccata 40133506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 699195 - 699271
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcata 217  Q
    ||||||||| | ||| |||||| || ||||||||||| ||| |||||||||  |||||||||||||||||| |||||    
T  699195 ttaacactatagcataaaaaatctagtgagtaacaccccactgtttgtacagtgacatcaaaagttcagtcatcata 699271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 214
Target Start/End: Complemental strand, 7209037 - 7208920
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnn-ggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggac 196  Q
    ||||||||| |||||||||||||||||||        ||| || |||||| |  ||||| ||||||| || ||||||||||  ||||||||||||  |||    
T  7209037 aaaattctacggtgaagtcataaaaatgactttttttggtgaagttaacattgtaacataaaaaatgcaacgagtaacaccctaccgtttgtacattgac 7208938  T
Q  197 atcaaaagttcagtcctc 214  Q
    ||||||||||||||||||    
T  7208937 atcaaaagttcagtcctc 7208920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 21088880 - 21088816
Alignment:
Q  157 aaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||  ||||| ||||| ||| |||||||||| ||||||||||||||||||| ||||||||    
T  21088880 aaaaatgttgtgagtgacaccccactgtttgtacaatgacatcaaaagttcagtccccatagtat 21088816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 13956475 - 13956425
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtaca 191  Q
    ||||||||| |||||||||| |||| ||||||||||||||| |||||||||    
T  13956475 ttaacactataacatcaaaactgtagtgagtaacacctcactgtttgtaca 13956425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 8742062 - 8741936
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctc-accgtttgtacaagg 194  Q
    ||||||||||||||||||||||| | |||||       ||| || ||||||||| | |||||||| |||  ||||||||||| | |  |||||||||| |    
T  8742062 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacacccccattgtttgtacaatg 8741963  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
     ||||||||||||||||  ||||||||    
T  8741962 gcatcaaaagttcagtctccatagtat 8741936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 26317860 - 26317778
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacc 177  Q
    |||||||||||||| ||||||||| |||||||       ||| || ||||||||| |||||||||||| ||| ||||||||||    
T  26317860 tggaaaattctatgatgaagtcatgaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacacc 26317778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 217
Target Start/End: Complemental strand, 35511653 - 35511531
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||| ||||||||||||||| |||||||       | | || |||||| || |||||||| | |||| ||||||||||  ||| ||||||| |  |    
T  35511653 tggaaaatcctatggtgaagtcatgaaaatgacgtttctgatgaagttaacattataacatcaacactgtagtgagtaacactccactgtttgtaaagtg 35511554  T
Q  195 acatcaaaagttcagtcctcata 217  Q
    ||||||||||||||||| |||||    
T  35511553 acatcaaaagttcagtcatcata 35511531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 22255620 - 22255656
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacc 177  Q
    ||||||||| |||||||||||||||||||||||||||    
T  22255620 ttaacactataacatcaaaaatgtaatgagtaacacc 22255656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 26268119 - 26268199
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| | |||||||| |||  ||||||||||| ||| ||||||||   ||||||||||||| ||||| ||||||||    
T  26268119 ttaacactatagcatcaaaagtgttttgagtaacaccccactgtttgtacggtgacatcaaaagtttagtccacatagtat 26268199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 39572819 - 39572944
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| | |||||        || || |||| |||| || || ||||||||  ||||||||||  ||| |||||| ||  ||    
T  39572819 ggaaaattctatggtgaagtcatgagaatgacttttctagttaagttaatactataatataaaaaatgttgtgagtaacactccactgtttgtgcagtga 39572918  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||| ||||||||||    
T  39572919 catcaaaagttcagttctcatagtat 39572944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 5837601 - 5837680
Alignment:
Q  142 taacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||||| | |||||||| |||  ||||||||||| ||| |||||||||  |||||||||| |||||||  ||||||||    
T  5837601 taacactatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtgacatcaaaatttcagtctccatagtat 5837680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 8437008 - 8437086
Alignment:
Q  138 aaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcat 216  Q
    |||||||||||| | | || ||| |||| ||||||||| | ||  |||||||||  |||||||||||||||||||||||    
T  8437008 aaattaacactatagcttccaaagtgtagtgagtaacatcccattgtttgtacagtgacatcaaaagttcagtcctcat 8437086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 33908280 - 33908358
Alignment:
Q  143 aacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||| | |||||||| |||| |||||| |||  ||| ||||||||   | ||||||||||||||||||||||||||    
T  33908280 aacactatatcatcaaaagtgtagtgagtagcactccactgtttgtacggtggcatcaaaagttcagtcctcatagtat 33908358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 22980838 - 22980918
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| |  |||||||||  | ||||||| ||| ||| |||||  ||| ||||||||||||||||||| ||||||||    
T  22980838 ttaacactatagtatcaaaaatacagtgagtaataccccactgtttgagcaatgacatcaaaagttcagtccccatagtat 22980918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 221
Target Start/End: Original strand, 7889 - 8012
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggaca 197  Q
    |||||||||||||||||| |||| |||||       | | || ||||||||| |||||||||| |||||||||||||||| ||| |||||||||| ||||    
T  7889 aaaattctatggtgaagttataagaatgacttttttgatgaagttaacactataacatcaaaattgtaatgagtaacaccccactgtttgtacaatgaca 7988  T
Q  198 tcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||||||||||    
T  7989 tcaaaagttcagtcctcatagtat 8012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 1945833 - 1945959
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnn-ggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    ||||||||||| ||||||||||||| |||||        ||| || ||||||||| ||||||||||||||||||||||||||| ||| ||||||| || |    
T  1945833 ggaaaattctacggtgaagtcataagaatgactttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtagaatg 1945932  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||| |||||||||||    
T  1945933 acatcaaaagttcagccctcatagtat 1945959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 96 - 225
Target Start/End: Original strand, 5627391 - 5627520
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||| ||||||||||||| |||||       ||| || ||||||||| ||||| |||||| |||||||||||||| |||  |||||| || ||    
T  5627391 ggaaaattctaaggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatataatgagtaacaccccactatttgtagaatga 5627490  T
Q  196 catcaaaagttcagtcctcatagtattatc 225  Q
    |||||||||||||| |||||||||||||||    
T  5627491 catcaaaagttcagccctcatagtattatc 5627520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 7055399 - 7055274
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||| |||||||||||||||| |||||       ||| || ||||||||| ||||| |||||| |||| |||||||||||||  |||||| || ||    
T  7055399 ggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactataacataaaaaatataattagtaacacctcactatttgtagaatga 7055300  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||| |||||||||||    
T  7055299 catcaaaagttcagccctcatagtat 7055274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 4319007 - 4318882
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| | |||||       ||| || ||||||||| |||||||||| ||| |||||||||||| ||| |||||||||  ||    
T  4319007 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaagtgttatgagtaacaccccactgtttgtacagtga 4318908  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||  || ||||||||    
T  4318907 catcaaaagttcaacccccatagtat 4318882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 217
Target Start/End: Original strand, 8513233 - 8513354
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| | |||||       ||| || ||||||||| || ||||||| |||  ||||||||||| ||| |||||||||  ||    
T  8513233 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataatatcaaaagtgttgtgagtaacaccccactgtttgtacagtga 8513332  T
Q  196 catcaaaagttcagtcctcata 217  Q
    ||||||||||||||||| ||||    
T  8513333 catcaaaagttcagtccccata 8513354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 225
Target Start/End: Complemental strand, 7235219 - 7235090
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    ||||||||||||||||||||| || | |||||       ||| || | ||||||| |||||||||| |||| |||||| |||| ||| ||||||||   |    
T  7235219 tggaaaattctatggtgaagttatgagaatgacttttccggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactgtttgtacggtg 7235120  T
Q  195 acatcaaaagttcagtcctcatagtattatc 225  Q
     ||||||||||||||| ||||||||||||||    
T  7235119 ccatcaaaagttcagt-ctcatagtattatc 7235090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 3880123 - 3879998
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||  | |||||       ||| || |||||| || |  ||||||| |||  |||||||||||  || |||||||||| ||    
T  3880123 ggaaaattctatggtgaagtcacgagaatgacttttctggtgaagttaacattatagtatcaaaagtgttgtgagtaacaccctactgtttgtacaatga 3880024  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||| ||| ||||||||    
T  3880023 catcaaaagttcaatccccatagtat 3879998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 33893141 - 33893070
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcc 212  Q
    ||||||||| |||||||||| |||  ||||||||||| |||  ||||||||| || || |||||||||||||    
T  33893141 ttaacactataacatcaaaagtgttgtgagtaacaccccactatttgtacaatgatattaaaagttcagtcc 33893070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 6091312 - 6091242
Alignment:
Q  151 aacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||| ||||||||| ||||||||||  ||  |||||||||| | ||||||||||||||| ||| ||||||    
T  6091312 aacataaaaaatgtagtgagtaacacaccattgtttgtacaatgccatcaaaagttcagtactcgtagtat 6091242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 15491670 - 15491740
Alignment:
Q  151 aacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||||||| |||  ||||||||||| |||  ||||||||  | |||||||||||||| |||||||||||    
T  15491670 aacatcaaaagtgttgtgagtaacaccccactatttgtacagtggcatcaaaagttcagccctcatagtat 15491740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 29182208 - 29182278
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtc 211  Q
    ||||||||| |||||||||| |||  ||||||||||| ||| |||| ||||  | ||||||||||||||||    
T  29182208 ttaacactataacatcaaaagtgttgtgagtaacaccccactgtttatacagtgtcatcaaaagttcagtc 29182278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 18498490 - 18498559
Alignment:
Q  153 catcaaaaatgtaatgagtaacacctc-accgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||||| |||| |||| |||||| | || |||||||||  | ||||||||||||||||||||||||||    
T  18498490 catcaaaagtgtagtgagcaacacccccacagtttgtacagtggcatcaaaagttcagtcctcatagtat 18498559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 21017235 - 21017171
Alignment:
Q  157 aaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||  ||||||||||| ||   ||||||||| | ||||||||||||||||| ||||||||    
T  21017235 aaaaatgttgtgagtaacaccccattatttgtacaatggcatcaaaagttcagtccccatagtat 21017171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 37663950 - 37663827
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||||| |||||       | | || |||||||||  |||| |||| |||||||||||||||| ||| |||||||||| ||    
T  37663950 ggaaaattctatggtgaagtcataagaatgacttttttgatgaagttaacacta--acattaaaactgtaatgagtaacaccccactgtttgtacaatga 37663853  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||||||||||||    
T  37663852 catcaaaagttcagtcctcatagtat 37663827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 19089664 - 19089539
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||||| ||| |       | | || ||||||||| || ||||||| |||||||||||||||| ||| ||||||| || ||    
T  19089664 ggaaaattctatggtgaagtcataagaataacttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtataatga 19089565  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||||||||||||    
T  19089564 catcaaaagttcagtcctcatagtat 19089539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 19440814 - 19440738
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcata 217  Q
    ||||||||| ||||||||||||||||||| ||||||  |||||||||||||| | ||||||||||||||||||||||    
T  19440814 ttaacactataacatcaaaaatgtaatgattaacactccaccgtttgtacaatggcatcaaaagttcagtcctcata 19440738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 25184113 - 25184238
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| | |||||       ||| || ||||||||| ||||||||||||||||||||||||||   || |||||||||| ||    
T  25184113 ggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaatga 25184212  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    |||| |||||||| || |||||||||    
T  25184213 catccaaagttcaatcttcatagtat 25184238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 25701268 - 25701143
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||| |||||||||||||| | |||||       |||||| |||||| || |||||||||| |||| |||||||||||  || |||||||||  ||    
T  25701268 ggaaaattttatggtgaagtcatgataatgacttttttggtaaagttaacattataacatcaaaagtgtagtgagtaacaccctactgtttgtacagtga 25701169  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||||||||||||    
T  25701168 catcaaaagttcagtcctcatagtat 25701143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 209
Target Start/End: Complemental strand, 34361702 - 34361589
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||||| |||||       ||| || ||||||||| ||||| ||||||||||||||||||||| ||| ||||||| || ||    
T  34361702 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgtagaatga 34361603  T
Q  196 catcaaaagttcag 209  Q
    ||| ||||||||||    
T  34361602 cattaaaagttcag 34361589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 55478106 - 55477977
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcac----cgtttgtaca 191  Q
    ||||||||||||||||||||||| | |||||       ||| || ||||||||| |||||||||||||||| |||||||||  |||     |||||||||    
T  55478106 ggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacactccactgtttgtttgtaca 55478007  T
Q  192 aggacatcaaaagttcagtcctcatagtat 221  Q
    | ||||||||||||||||||||||||||||    
T  55478006 atgacatcaaaagttcagtcctcatagtat 55477977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 879712 - 879634
Alignment:
Q  143 aacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||| ||||||||||||||||||||||||||||||  |||||||||| ||||||||||||| | || |||||||||    
T  879712 aacactataacatcaaaaatgtaatgagtaacacctcattgtttgtacaatgacatcaaaagtttaatcttcatagtat 879634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 211
Target Start/End: Original strand, 3042611 - 3042726
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||||||||||||| ||||||||||||       ||| || ||||||||| |||||  |||||||||||||||| ||| |||||||| ||||| ||    
T  3042611 ggaaaattctatggtgaaatcataaaaatgatttttttggtgaagttaacactataacatacaaaatgtaatgagtaataccccaccgtttatacaatga 3042710  T
Q  196 catcaaaagttcagtc 211  Q
    |||||||| |||||||    
T  3042711 catcaaaaattcagtc 3042726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 221
Target Start/End: Original strand, 23761111 - 23761197
Alignment:
Q  135 gtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||| ||||||||| |||||||||| |||  ||||||||||||||| ||||||| |  ||||||||||||||||||| ||||||||    
T  23761111 gtaaagttaacactataacatcaaaagtgttgtgagtaacacctcactgtttgtatagtgacatcaaaagttcagtccccatagtat 23761197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 29584364 - 29584286
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||| |||||||||| |||  ||||||||||||||| |||||||||| | |||||||||||||||| |||||||||    
T  29584364 ttaacactataacatcaaaagtgt--tgagtaacacctcactgtttgtacaatggcatcaaaagttcagtcttcatagtat 29584286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 26143928 - 26143980
Alignment:
Q  33 tattgatagtgaattaatgcctattttgaaaactaatcaacattttaaatata 85  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  26143928 tattgatggtgaatcaatgcctattttgaaaactaatcaacattttaaatata 26143980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 30002835 - 30002710
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||| |||||||||||||||| |||||||       ||| || ||||||||  | |||||||| |||  ||||||||||||||| |||||||||  ||    
T  30002835 ggaaaactctatggtgaagtcattaaaatgatttttctggtgaagttaacactgtagcatcaaaagtgttgtgagtaacacctcactgtttgtacagtga 30002736  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||||| || ||||||    
T  30002735 catcaaaagttcagtcttcttagtat 30002710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 32912791 - 32912710
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacc 177  Q
    ||||||||||||||||||||||||| |||||       ||| || ||||||||| |||||||||||||||||||||||||||    
T  32912791 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacc 32912710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 4396326 - 4396418
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgt 188  Q
    |||||||||||| ||||||||||||||||||        || || ||||||||| ||||| ||||||||||||||||||||| ||||||||||    
T  4396326 ggaaaattctatagtgaagtcataaaaatgacttttttagtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgt 4396418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 221
Target Start/End: Original strand, 47253742 - 47253873
Alignment:
Q  89 tttatgtggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgt 188  Q
    |||||||| ||||||||||||||||||||| | |||||       ||| || ||||||||| | |||||||| |||  ||||||||||| ||  |||| |    
T  47253742 tttatgtgaaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactatatcatcaaaagtgttgtgagtaacacc-cattgtttat 47253840  T
Q  189 acaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||  ||||||||||||||||||||||||||||    
T  47253841 acagtgacatcaaaagttcagtcctcatagtat 47253873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 96 - 208
Target Start/End: Original strand, 50697242 - 50697354
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||| |||||||||||||||||||        || || | ||||||| ||||| |||||| ||| ||||||||||  ||||||||||||| ||    
T  50697242 ggaaaattctacggtgaagtcataaaaatgatttttttagtgaagtaaacactataacataaaaaatataacgagtaacaccctaccgtttgtacaatga 50697341  T
Q  196 catcaaaagttca 208  Q
    |||||||||||||    
T  50697342 catcaaaagttca 50697354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 221
Target Start/End: Complemental strand, 36493897 - 36493774
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggaca 197  Q
    ||||||||||||||||||||| ||||| |       ||| || |||| |||| | |||||||||| || ||||||||||| ||  |||||||||  ||||    
T  36493897 aaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacaccccattgtttgtacagtgaca 36493798  T
Q  198 tcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||| ||||||||    
T  36493797 tcaaaagttcagtccccatagtat 36493774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 35021246 - 35021121
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||| |||||||       ||| || |||||| || ||||||||||||||| ||||||||||  ||| |||||||||  |     
T  35021246 ggaaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacattataacatcaaaaatgtagtgagtaacacaccactgtttgtacattgg 35021147  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    | |||||||||  |||||| ||||||    
T  35021146 cgtcaaaagtttcgtcctcgtagtat 35021121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 42199729 - 42199854
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||| ||||||||||| |||||| |||||       ||| || |||| |||| ||||||||||||||||||||||| ||| ||   |||||| || ||    
T  42199729 ggaaaaatctatggtgaaatcataagaatgatttttttggtgaagttaatactataacatcaaaaatgtaatgagtaataccccattatttgtagaatga 42199828  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||| |||||||||| |||||||||||    
T  42199829 cataaaaagttcagccctcatagtat 42199854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 37287772 - 37287855
Alignment:
Q  134 ggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcata 217  Q
    |||||| ||||||||| |||||||||| |||  ||||||||||| ||| |||||||||  | ||||||||||||| ||||||||    
T  37287772 ggtaaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcaaaagttcaatcctcata 37287855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 211
Target Start/End: Original strand, 39397917 - 39398033
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||||||||||||| | |||||       ||| || ||||||||| ||||| |||| |||  ||||||||||| ||  |||||||||  |    
T  39397917 tggaaaattctatggtgaagtcattagaatgacttttatggtgaagttaacactataacattaaaagtgttgtgagtaacaccccattgtttgtacagtg 39398016  T
Q  195 acatcaaaagttcagtc 211  Q
    |||||||||||||||||    
T  39398017 acatcaaaagttcagtc 39398033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 221
Target Start/End: Original strand, 27396618 - 27396741
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggaca 197  Q
    ||||||||||||||||||||| | |||||       ||| || |||||| || | ||| |||| ||| ||||||||||||  || |||||||||| ||||    
T  27396618 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattatagcattaaaagtgttatgagtaacaccctactgtttgtacaatgaca 27396717  T
Q  198 tcaaaagttcagtcctcatagtat 221  Q
    |||||||||  |||||||||||||    
T  27396718 tcaaaagtttcgtcctcatagtat 27396741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 7703516 - 7703642
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagg 194  Q
    |||||||||||||| | ||||||| | |||||       ||| || ||||||||| |||||||||| |||  | ||||||||| ||| ||||||||   |    
T  7703516 tggaaaattctatgttaaagtcatgagaatgacttttctggtgaagttaacactataacatcaaaagtgttgtcagtaacaccccactgtttgtacggtg 7703615  T
Q  195 acatcaaaagttcagtcctcatagtat 221  Q
    |||||||||||||||||| ||||||||    
T  7703616 acatcaaaagttcagtccccatagtat 7703642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 17167758 - 17167838
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||| || || |||||||||||  ||||||||||| ||| |||||||||| ||||||||||||||| ||  ||||||||    
T  17167758 ttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgacatcaaaagttcattctccatagtat 17167838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 17173335 - 17173415
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||| || || |||||||||||  ||||||||||| ||| |||||||||| ||||||||||||||| ||  ||||||||    
T  17173335 ttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgacatcaaaagttcaatctccatagtat 17173415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 34948263 - 34948187
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcata 217  Q
    ||||||||| |||||||||| |||  ||||||||||| ||| ||||||| |  | ||||||||||||||||||||||    
T  34948263 ttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtaaagtggcatcaaaagttcagtcctcata 34948187  T

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Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 221
Target Start/End: Complemental strand, 35025799 - 35025674
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||| ||||||||| |||||||       ||| || | ||||||| | |||||||| |||| |||||| |||| ||| |||| |||   ||    
T  35025799 ggaaaattctatgctgaagtcatgaaaatgatttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcaccccactgtttatacgttga 35025700  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||||| ||||||    
T  35025699 catcaaaagttcagtcctcgtagtat 35025674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 54499405 - 54499334
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtac-aaggacatcaaaagttcagtc 211  Q
    ||||||||| | |||||||| |||  ||||||||||| |||||||||||| || ||||||||||||||||||    
T  54499405 ttaacactatagcatcaaaagtgttgtgagtaacaccccaccgtttgtactaatgacatcaaaagttcagtc 54499334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 50764785 - 50764855
Alignment:
Q  151 aacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||||||| |||  ||||||||||| ||| ||||||||   ||||||||||||||| ||||||||||||    
T  50764785 aacatcaaaagtgttgtgagtaacaccccactgtttgtacggtgacatcaaaagttcaatcctcatagtat 50764855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 53124286 - 53124368
Alignment:
Q  95 tggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacc 177  Q
    ||||||||| |||| ||||||||| |||||||       ||| || ||||||||| |||||||||||| ||||||||||||||    
T  53124286 tggaaaattatatgatgaagtcattaaaatgatttttttggtgaagttaacactataacatcaaaaatataatgagtaacacc 53124368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 4205116 - 4205221
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||  |||||||       | | || ||||||||| || |||||||||||  ||| ||||||| ||| |||||||||| ||    
T  4205116 ggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttctgaataacaccccactgtttgtacaatga 4205215  T
Q  196 catcaa 201  Q
    ||||||    
T  4205216 catcaa 4205221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 225
Target Start/End: Original strand, 38011854 - 38011983
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    |||||||||||||||||| |||| | |||||       ||| || | ||||||| |||||||||| |||| ||| || |||| ||| ||||||||   |     
T  38011854 ggaaaattctatggtgaaatcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgaatagcaccccactgtttgtacggtgc 38011953  T
Q  196 catcaaaagttcagtcctcatagtattatc 225  Q
    ||||||||||||||||| |||| |||||||    
T  38011954 catcaaaagttcagtccccataatattatc 38011983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 4597994 - 4598108
Alignment:
Q  97 gaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggac 196  Q
    ||||||| |||||||||||||| | |||||       ||| || ||||||||| |||||||||  |||  ||||||||||| ||| |||||||||  | |    
T  4597994 gaaaattttatggtgaagtcattagaatgacttttctggtgaagttaacactataacatcaaag-tgttgtgagtaacaccccactgtttgtacagtggc 4598092  T
Q  197 atcaaaagttcagtcc 212  Q
    ||||||||||||||||    
T  4598093 atcaaaagttcagtcc 4598108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 9139316 - 9139370
Alignment:
Q  167 tgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||||||||| |||||||||||||  ||||| ||||||||| ||| ||||||||    
T  9139316 tgagtaacaccccaccgtttgtacagtgacataaaaagttcaatccccatagtat 9139370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 37775670 - 37775780
Alignment:
Q  97 gaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggac 196  Q
    |||||||||| ||||||||||| |||||||       ||| || ||| ||||| || || ||||||||  ||||||||||| ||| |||||||||  | |    
T  37775670 gaaaattctacggtgaagtcattaaaatgatttttttggtgaagttagcactataatattaaaaatgttgtgagtaacaccccactgtttgtacagtggc 37775769  T
Q  197 atcaaaagttc 207  Q
    |||||||||||    
T  37775770 atcaaaagttc 37775780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 126
Target Start/End: Original strand, 51204580 - 51204609
Alignment:
Q  97 gaaaattctatggtgaagtcataaaaatga 126  Q
    ||||||||||||||||||||||||||||||    
T  51204580 gaaaattctatggtgaagtcataaaaatga 51204609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 55241243 - 55241190
Alignment:
Q  168 gagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||||||| ||| |||||||||  | ||||||||||||||||| ||||||||    
T  55241243 gagtaacaccccactgtttgtacagtggcatcaaaagttcagtccccatagtat 55241190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 6864084 - 6864160
Alignment:
Q  145 cactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    ||||| |||||||||||| |||||| ||||| |  ||  |||||||||   |||||||||| |||||||||||||||    
T  6864084 cactataacatcaaaaatttaatgaataacatccaactttttgtacaatagcatcaaaagtccagtcctcatagtat 6864160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 46888323 - 46888247
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcata 217  Q
    |||| |||| |||||||||| |||| ||||||| ||| |||  ||||||||  | ||||||||||||||||| ||||    
T  46888323 ttaatactataacatcaaaattgtagtgagtaataccccactatttgtacagcggcatcaaaagttcagtccccata 46888247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 49376024 - 49376092
Alignment:
Q  153 catcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctcatagtat 221  Q
    |||||||| |||  ||||||||||| ||| | |||||||  | |||||||||||||||| |||||||||    
T  49376024 catcaaaagtgtcgtgagtaacaccccactgcttgtacagtggcatcaaaagttcagtcttcatagtat 49376092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 1e-18; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 408558 - 408495
Alignment:
Q  151 aacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagttcagtcctc 214  Q
    |||||||||||||||||||||||||||| |||||||||| || || ||||||||||||||||||    
T  408558 aacatcaaaaatgtaatgagtaacaccttaccgtttgtaaaatgaaatcaaaagttcagtcctc 408495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 134 - 259
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaagga 195  Q
    ||||||||||||||||||||||  |||||||       ||| || ||||||||  |  || ||||||||  ||||||||||  ||| |||||||||| |     
T  134 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactgtagtataaaaaatgttgtgagtaacactccactgtttgtacaatgg 233  T
Q  196 catcaaaagttcagtcctcatagtat 221  Q
    ||||||||||||||||||||||||||    
T  234 catcaaaagttcagtcctcatagtat 259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 126
Target Start/End: Complemental strand, 408754 - 408724
Alignment:
Q  96 ggaaaattctatggtgaagtcataaaaatga 126  Q
    |||||||||||||||||||||||||||||||    
T  408754 ggaaaattctatggtgaagtcataaaaatga 408724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 94523 - 94458
Alignment:
Q  141 ttaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggacatcaaaagtt 206  Q
    |||||| || |||||||||| |||| ||||||||||| ||| |||||||||  | |||||||||||    
T  94523 ttaacattataacatcaaaattgtagtgagtaacaccccactgtttgtacagtggcatcaaaagtt 94458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 221
Target Start/End: Original strand, 43959 - 44082
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggaca 197  Q
    ||||||||||||||||||| ||| || ||       ||| || ||||| ||| || |||||||||||||||||||||||| |   |||||||||| | ||    
T  43959 aaaattctatggtgaagtcgtaagaaagacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggca 44058  T
Q  198 tcaaaagttcagtcctcatagtat 221  Q
    | ||||||||||||||||||||||    
T  44059 taaaaagttcagtcctcatagtat 44082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 221
Target Start/End: Complemental strand, 146199 - 146076
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggaca 197  Q
    ||||||||| ||||||||||||| |||||       ||| || |||||| || ||||| ||||||||||||||||||||| ||   |||||| || ||||    
T  146199 aaaattctacggtgaagtcataagaatgatttttttggttaagttaacattataacataaaaaatgtaatgagtaacaccccattatttgtagaatgaca 146100  T
Q  198 tcaaaagttcagtcctcatagtat 221  Q
    |||||||||||| | |||||||||    
T  146099 tcaaaagttcagccttcatagtat 146076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 221
Target Start/End: Complemental strand, 154828 - 154705
Alignment:
Q  98 aaaattctatggtgaagtcataaaaatgannnnnnnggtaaaattaacactacaacatcaaaaatgtaatgagtaacacctcaccgtttgtacaaggaca 197  Q
    ||||||||||||||||||| ||| || ||       ||| || ||||| ||| || |||||||||||||||||||||||| |   |||||||||| | ||    
T  154828 aaaattctatggtgaagtcgtaagaaagacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggca 154729  T
Q  198 tcaaaagttcagtcctcatagtat 221  Q
    | ||||||||||||||||||||||    
T  154728 taaaaagttcagtcctcatagtat 154705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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