View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9395_low_46 (Length: 211)
Name: NF9395_low_46
Description: NF9395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9395_low_46 |
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Alignment Details
Target: chr3 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 52475212 - 52475373
Alignment:
| Q |
15 |
cagagactcacaggaaatcttgaaggattgaagatctccgggtcattgtgaatagttggatcatgatgtatagatctagcatcaatattgatgttccaac |
114 |
Q |
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| T |
52475212 |
cagagactcacaggaaatcttgaaggattgaagatctccgggtcattgtgaatagttggatcatgatgtatagatctagcatcaatattgatgttccaac |
52475311 |
T |
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| Q |
115 |
ctttcttgatattaaatcctatataaatagccattaagtaattatactactgagtttattta |
176 |
Q |
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| T |
52475312 |
ctttcttgatattaaatcctatataaatagccattaagtaattatactactgagtttattta |
52475373 |
T |
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