View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9395_low_7 (Length: 452)

Name: NF9395_low_7
Description: NF9395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9395_low_7
NF9395_low_7
[»] chr4 (57 HSPs)
chr4 (166-436)||(878981-879251)
chr4 (18-83)||(34361635-34361700)
chr4 (18-83)||(25184115-25184180)
chr4 (18-83)||(32912724-32912789)
chr4 (18-83)||(55478039-55478104)
chr4 (16-80)||(47253749-47253813)
chr4 (10-83)||(879692-879765)
chr4 (15-66)||(27396615-27396666)
chr4 (18-83)||(19440792-19440858)
chr4 (18-80)||(28003133-28003195)
chr4 (18-80)||(38011856-38011918)
chr4 (18-80)||(39397920-39397982)
chr4 (16-74)||(52516597-52516655)
chr4 (18-83)||(4396328-4396393)
chr4 (18-83)||(35021179-35021244)
chr4 (17-61)||(20097494-20097538)
chr4 (18-82)||(50697244-50697308)
chr4 (19-82)||(6864038-6864101)
chr4 (18-61)||(38812263-38812306)
chr4 (18-80)||(7703519-7703581)
chr4 (18-80)||(17272013-17272075)
chr4 (18-80)||(29584345-29584407)
chr4 (18-80)||(34948244-34948306)
chr4 (16-82)||(36493833-36493899)
chr4 (18-83)||(3042613-3042678)
chr4 (18-75)||(4597995-4598052)
chr4 (18-67)||(37663899-37663948)
chr4 (18-83)||(46884178-46884243)
chr4 (18-82)||(9139249-9139313)
chr4 (18-80)||(37287735-37287798)
chr4 (18-61)||(38811815-38811858)
chr4 (18-61)||(47073660-47073703)
chr4 (18-61)||(55241270-55241313)
chr4 (18-72)||(19089608-19089662)
chr4 (18-80)||(25701204-25701266)
chr4 (13-83)||(42199726-42199796)
chr4 (18-83)||(4205118-4205183)
chr4 (16-61)||(33255499-33255544)
chr4 (18-66)||(49375968-49376017)
chr4 (16-80)||(33341395-33341459)
chr4 (18-82)||(53124289-53124353)
chr4 (18-61)||(2704514-2704557)
chr4 (18-61)||(28293240-28293283)
chr4 (18-61)||(49878638-49878680)
chr4 (18-61)||(51204581-51204624)
chr4 (18-61)||(54995802-54995845)
chr4 (15-61)||(2266859-2266905)
chr4 (18-80)||(7152253-7152315)
chr4 (19-53)||(17612338-17612372)
chr4 (18-80)||(32579446-32579508)
chr4 (18-80)||(35025735-35025797)
chr4 (9-83)||(37775663-37775736)
chr4 (11-61)||(47236859-47236909)
chr4 (18-59)||(9743590-9743631)
chr4 (88-131)||(879292-879333)
chr4 (16-80)||(5048112-5048176)
chr4 (14-66)||(33816694-33816746)
[»] chr1 (43 HSPs)
chr1 (16-82)||(15752025-15752091)
chr1 (18-83)||(1547285-1547350)
chr1 (18-83)||(10922725-10922790)
chr1 (9-82)||(18422640-18422713)
chr1 (18-82)||(10182122-10182186)
chr1 (18-82)||(37619010-37619074)
chr1 (12-83)||(30254850-30254921)
chr1 (18-83)||(27227592-27227655)
chr1 (18-83)||(19899882-19899947)
chr1 (18-82)||(23999345-23999409)
chr1 (12-83)||(30254416-30254487)
chr1 (18-61)||(47279161-47279204)
chr1 (18-80)||(2959746-2959808)
chr1 (18-80)||(3309146-3309208)
chr1 (18-80)||(14758039-14758101)
chr1 (18-80)||(16415643-16415705)
chr1 (18-80)||(38823212-38823274)
chr1 (18-83)||(47682608-47682671)
chr1 (18-83)||(15382931-15382996)
chr1 (18-75)||(31621674-31621731)
chr1 (18-83)||(32267032-32267097)
chr1 (18-78)||(21289663-21289723)
chr1 (14-82)||(41926157-41926225)
chr1 (18-82)||(42721037-42721101)
chr1 (18-61)||(4150490-4150533)
chr1 (16-83)||(28769649-28769716)
chr1 (26-89)||(37451292-37451355)
chr1 (18-61)||(43579244-43579287)
chr1 (18-72)||(7079198-7079252)
chr1 (19-61)||(42663788-42663830)
chr1 (18-83)||(8222129-8222194)
chr1 (18-83)||(30327065-30327130)
chr1 (18-75)||(34012498-34012555)
chr1 (15-67)||(238641-238693)
chr1 (13-61)||(16132472-16132520)
chr1 (18-61)||(13876922-13876965)
chr1 (18-61)||(26970263-26970306)
chr1 (29-83)||(27267312-27267364)
chr1 (27-66)||(47279196-47279235)
chr1 (18-80)||(22170752-22170814)
chr1 (18-67)||(11742479-11742528)
chr1 (16-61)||(33725735-33725780)
chr1 (16-83)||(46931404-46931474)
[»] chr8 (40 HSPs)
chr8 (18-83)||(10555326-10555391)
chr8 (16-82)||(7891073-7891139)
chr8 (18-83)||(23854555-23854620)
chr8 (22-83)||(37970643-37970704)
chr8 (18-83)||(43643719-43643784)
chr8 (11-83)||(1150229-1150301)
chr8 (18-81)||(15009243-15009306)
chr8 (18-83)||(1204928-1204993)
chr8 (18-80)||(13307624-13307686)
chr8 (9-83)||(30654707-30654781)
chr8 (18-80)||(38643979-38644041)
chr8 (16-61)||(35735987-35736032)
chr8 (12-80)||(465837-465905)
chr8 (18-82)||(16222864-16222928)
chr8 (18-82)||(35459823-35459887)
chr8 (6-61)||(6446709-6446764)
chr8 (18-80)||(5300073-5300135)
chr8 (16-61)||(23176766-23176811)
chr8 (18-75)||(34894968-34895025)
chr8 (18-67)||(41362519-41362568)
chr8 (18-82)||(6098643-6098707)
chr8 (18-83)||(8803934-8803995)
chr8 (13-80)||(16447002-16447069)
chr8 (13-80)||(27082965-27083032)
chr8 (19-61)||(5018013-5018055)
chr8 (18-56)||(7998364-7998402)
chr8 (9-83)||(12876101-12876175)
chr8 (18-72)||(24823407-24823461)
chr8 (18-67)||(4133148-4133197)
chr8 (18-67)||(33906225-33906274)
chr8 (18-83)||(36695090-36695155)
chr8 (18-51)||(39099265-39099298)
chr8 (13-61)||(1835392-1835440)
chr8 (13-61)||(1879233-1879281)
chr8 (18-61)||(4108915-4108958)
chr8 (23-61)||(8151415-8151453)
chr8 (30-80)||(11727037-11727087)
chr8 (18-80)||(44869497-44869559)
chr8 (18-67)||(31934026-31934075)
chr8 (25-61)||(41191022-41191058)
[»] chr3 (44 HSPs)
chr3 (18-83)||(51213099-51213164)
chr3 (18-83)||(40552377-40552442)
chr3 (18-82)||(46297881-46297945)
chr3 (18-67)||(11835740-11835789)
chr3 (26-83)||(29099356-29099413)
chr3 (18-83)||(35844319-35844384)
chr3 (18-83)||(48354934-48354999)
chr3 (11-83)||(3655320-3655392)
chr3 (13-80)||(7327603-7327671)
chr3 (9-61)||(53818512-53818564)
chr3 (18-61)||(40640637-40640680)
chr3 (18-80)||(4015453-4015515)
chr3 (9-67)||(21193590-21193648)
chr3 (18-80)||(22450961-22451023)
chr3 (18-72)||(26941389-26941443)
chr3 (18-80)||(37157701-37157763)
chr3 (19-61)||(38392631-38392673)
chr3 (18-58)||(43348282-43348322)
chr3 (18-61)||(49359631-49359674)
chr3 (18-80)||(27480500-27480562)
chr3 (18-80)||(37203060-37203122)
chr3 (18-80)||(45174496-45174558)
chr3 (18-80)||(52041044-52041106)
chr3 (18-75)||(11466817-11466874)
chr3 (18-83)||(20373414-20373479)
chr3 (18-83)||(47481515-47481580)
chr3 (15-80)||(54828821-54828886)
chr3 (18-54)||(43976032-43976068)
chr3 (13-61)||(45879501-45879549)
chr3 (18-82)||(55343403-55343467)
chr3 (18-61)||(42665544-42665587)
chr3 (18-61)||(47930669-47930712)
chr3 (18-61)||(53811979-53812022)
chr3 (19-61)||(4556543-4556585)
chr3 (19-61)||(5124671-5124713)
chr3 (19-61)||(23165841-23165883)
chr3 (18-80)||(44186622-44186684)
chr3 (18-80)||(44891500-44891561)
chr3 (18-80)||(46994771-46994833)
chr3 (31-80)||(11357486-11357535)
chr3 (18-83)||(54505801-54505866)
chr3 (18-83)||(4761767-4761834)
chr3 (19-66)||(22446199-22446247)
chr3 (19-51)||(32373466-32373498)
[»] chr7 (43 HSPs)
chr7 (18-83)||(18797306-18797369)
chr7 (18-83)||(17842705-17842770)
chr7 (18-83)||(24211718-24211783)
chr7 (18-83)||(37109849-37109914)
chr7 (18-83)||(26524446-26524511)
chr7 (18-64)||(241021-241067)
chr7 (18-80)||(5657603-5657665)
chr7 (13-83)||(31579188-31579258)
chr7 (18-80)||(48928685-48928747)
chr7 (18-79)||(7334771-7334832)
chr7 (15-80)||(25691667-25691732)
chr7 (18-83)||(32821172-32821237)
chr7 (18-83)||(38258522-38258587)
chr7 (16-80)||(27421501-27421565)
chr7 (15-82)||(23111164-23111231)
chr7 (18-80)||(12390752-12390814)
chr7 (18-83)||(9355945-9356010)
chr7 (18-83)||(27283721-27283786)
chr7 (18-83)||(43686018-43686083)
chr7 (17-61)||(3953732-3953776)
chr7 (16-67)||(8299190-8299241)
chr7 (18-61)||(23402374-23402417)
chr7 (18-80)||(8861262-8861324)
chr7 (18-80)||(21991613-21991675)
chr7 (18-75)||(15612885-15612942)
chr7 (30-83)||(22687228-22687281)
chr7 (18-82)||(31520843-31520907)
chr7 (18-82)||(37346999-37347063)
chr7 (32-80)||(48928418-48928466)
chr7 (18-61)||(4582896-4582939)
chr7 (18-53)||(30055503-30055538)
chr7 (18-61)||(40381942-40381985)
chr7 (16-82)||(44413499-44413566)
chr7 (18-80)||(6546496-6546558)
chr7 (18-56)||(10359360-10359398)
chr7 (13-67)||(32432429-32432483)
chr7 (18-80)||(33688384-33688445)
chr7 (18-82)||(10481580-10481645)
chr7 (24-61)||(22955315-22955352)
chr7 (18-51)||(41765229-41765262)
chr7 (28-61)||(46481218-46481251)
chr7 (19-51)||(10675345-10675377)
chr7 (15-51)||(19786279-19786315)
[»] chr6 (18 HSPs)
chr6 (18-80)||(4318943-4319005)
chr6 (18-82)||(5627393-5627457)
chr6 (18-82)||(7055333-7055397)
chr6 (16-80)||(30353478-30353542)
chr6 (18-72)||(8513235-8513289)
chr6 (18-80)||(20768088-20768150)
chr6 (9-83)||(1945826-1945901)
chr6 (16-67)||(6088908-6088959)
chr6 (18-80)||(7235154-7235216)
chr6 (15-80)||(29182162-29182227)
chr6 (18-66)||(3880073-3880121)
chr6 (18-61)||(3005396-3005439)
chr6 (18-61)||(19631751-19631794)
chr6 (9-61)||(30338469-30338521)
chr6 (15-66)||(21017246-21017297)
chr6 (15-61)||(6614039-6614085)
chr6 (18-80)||(33893122-33893184)
chr6 (18-66)||(18498435-18498483)
[»] chr5 (43 HSPs)
chr5 (18-80)||(15724492-15724554)
chr5 (18-83)||(14409434-14409499)
chr5 (18-82)||(5112422-5112486)
chr5 (18-82)||(12910352-12910416)
chr5 (12-80)||(25501037-25501105)
chr5 (18-82)||(26317793-26317857)
chr5 (18-81)||(22974192-22974255)
chr5 (18-80)||(8741998-8742060)
chr5 (18-80)||(19119861-19119923)
chr5 (18-83)||(31705719-31705784)
chr5 (18-83)||(35826591-35826656)
chr5 (16-83)||(27318595-27318662)
chr5 (16-82)||(699150-699216)
chr5 (18-80)||(7693232-7693294)
chr5 (18-83)||(16004484-16004550)
chr5 (18-80)||(27330308-27330370)
chr5 (18-83)||(31786754-31786819)
chr5 (18-83)||(39572821-39572886)
chr5 (18-82)||(1429254-1429318)
chr5 (18-61)||(22616496-22616539)
chr5 (18-61)||(26411295-26411338)
chr5 (18-80)||(8466747-8466809)
chr5 (18-67)||(35933904-35933953)
chr5 (18-83)||(36860425-36860490)
chr5 (16-60)||(5837555-5837599)
chr5 (18-83)||(24886104-24886171)
chr5 (18-82)||(36866764-36866828)
chr5 (18-66)||(40133387-40133435)
chr5 (17-83)||(7208971-7209038)
chr5 (17-80)||(26268075-26268138)
chr5 (18-80)||(9200235-9200297)
chr5 (15-53)||(12081284-12081322)
chr5 (19-61)||(13380498-13380540)
chr5 (18-80)||(13956456-13956518)
chr5 (18-83)||(17158138-17158206)
chr5 (18-80)||(23116333-23116395)
chr5 (18-80)||(32563151-32563213)
chr5 (18-80)||(38528347-38528409)
chr5 (25-66)||(5748437-5748478)
chr5 (13-54)||(12164926-12164967)
chr5 (18-67)||(22980795-22980844)
chr5 (16-57)||(33163513-33163554)
chr5 (25-53)||(43308790-43308818)
[»] chr2 (41 HSPs)
chr2 (18-83)||(17054232-17054297)
chr2 (18-83)||(17071873-17071938)
chr2 (18-83)||(33551122-33551187)
chr2 (14-61)||(41643870-41643917)
chr2 (18-83)||(11366517-11366582)
chr2 (18-67)||(41465511-41465560)
chr2 (18-82)||(29242275-29242339)
chr2 (15-59)||(36641985-36642029)
chr2 (13-61)||(41464008-41464056)
chr2 (13-61)||(43446465-43446513)
chr2 (16-80)||(43770978-43771041)
chr2 (18-61)||(31861897-31861940)
chr2 (18-80)||(19424767-19424829)
chr2 (13-58)||(7007051-7007096)
chr2 (18-83)||(35958911-35958976)
chr2 (18-83)||(37905711-37905775)
chr2 (18-66)||(13711466-13711514)
chr2 (18-66)||(19313854-19313902)
chr2 (18-61)||(34441924-34441967)
chr2 (18-61)||(42005391-42005434)
chr2 (18-80)||(18494407-18494469)
chr2 (18-80)||(26357579-26357641)
chr2 (18-80)||(31570873-31570935)
chr2 (18-83)||(33902070-33902133)
chr2 (18-80)||(41960885-41960947)
chr2 (18-66)||(4166924-4166972)
chr2 (16-80)||(33660507-33660571)
chr2 (18-61)||(6177777-6177820)
chr2 (18-61)||(18514774-18514817)
chr2 (18-61)||(19093415-19093458)
chr2 (19-61)||(58025-58067)
chr2 (18-80)||(4264216-4264278)
chr2 (18-75)||(2325514-2325571)
chr2 (20-61)||(18947601-18947642)
chr2 (16-61)||(30844844-30844889)
chr2 (18-71)||(39167511-39167564)
chr2 (4-61)||(39788580-39788637)
chr2 (15-83)||(3176938-3177006)
chr2 (18-66)||(4763630-4763678)
chr2 (18-61)||(19073359-19073403)
chr2 (18-82)||(19289460-19289519)
[»] scaffold0009 (2 HSPs)
scaffold0009 (18-81)||(100823-100886)
scaffold0009 (13-80)||(42345-42412)
[»] scaffold0291 (1 HSPs)
scaffold0291 (15-80)||(7886-7951)
[»] scaffold0022 (1 HSPs)
scaffold0022 (16-83)||(146134-146201)
[»] scaffold0318 (1 HSPs)
scaffold0318 (16-80)||(11906-11971)
[»] scaffold0061 (1 HSPs)
scaffold0061 (16-83)||(43957-44024)
[»] scaffold0017 (1 HSPs)
scaffold0017 (16-83)||(154763-154830)
[»] scaffold0002 (2 HSPs)
scaffold0002 (13-67)||(131-185)
scaffold0002 (18-67)||(408703-408752)
[»] scaffold0312 (1 HSPs)
scaffold0312 (18-61)||(9138-9181)
[»] scaffold0262 (1 HSPs)
scaffold0262 (18-61)||(12141-12184)


Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 166 - 436
Target Start/End: Complemental strand, 879251 - 878981
Alignment:
Q  166 caaagctaaacaaaaatacgtgtttgttgatatcttaacatggtttcatggaaaatggannnnnnngttgaagtttgttcaataaaatgcggtttgagaa 265  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| ||||||||||||    
T  879251 caaagctaaacaaaaatacatgtttgttgatatcttaacatggtttcatggaaaatggatttttttgttgaagtttgttcaataaaacgcggtttgagaa 879152  T
Q  266 tgaagagtgtgtgaaatggtgacaacaacataatgatactagaaaattatctaaaattctaatcatgatgtatactttacctagtagtagaacttcatga 365  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  879151 tgaagagtgtgtgaaatggtgacaacaacataatgatactagaaaattatctaaaattgtgatcatgatgtatactttacctagtagtagaacttcatga 879052  T
Q  366 acattctcgtgtccacgattaagataatatctgatcaatgttgactatgatcgtaaatgtttgtttcaaac 436  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  879051 acattctcgtgtccacgattaagacaatatctgatcaatgttgactatgctcgtaaatgtttgtttcaaac 878981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 34361700 - 34361635
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||    
T  34361700 aaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatg 34361635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 25184115 - 25184180
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||| |||||||    
T  25184115 aaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatg 25184180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 32912789 - 32912724
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||||    
T  32912789 aaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatg 32912724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 55478104 - 55478039
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| |||||||    
T  55478104 aaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactataacatcaaaaatg 55478039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 47253749 - 47253813
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||| ||||    
T  47253749 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactatatcatcaaaa 47253813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 879765 - 879692
Alignment:
Q  10 aaattagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||| |||||| || ||||||||||||||||| | |||||||||||||||||||| ||||||| |||||||    
T  879765 aaattaggaaaattttaaggtgaagtcatgagaataatttttttggtgaagtaaacactataacatcaaaaatg 879692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 27396615 - 27396666
Alignment:
Q  15 agaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaaca 66  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  27396615 agaaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaaca 27396666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 19440858 - 19440792
Alignment:
Q  18 aaaattctatggtgaa-gtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||| ||||||||||||||||||||||||| || ||||| ||||||| |||||||    
T  19440858 aaaattctatggtgaaagtcatgagaatgacttttttggtgatgttaacactataacatcaaaaatg 19440792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 28003195 - 28003133
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| ||| ||| ||||    
T  28003195 aaaattctatggtgaagtcatgagaatgacttttctggtgaagtcaacactatagcatcaaaa 28003133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 38011856 - 38011918
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||| ||||||||||||||||| ||||||||| ||||| ||||||| ||||    
T  38011856 aaaattctatggtgaaatcatgagaatgacttttctggtgaagtcaacactataacatcaaaa 38011918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 39397920 - 39397982
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||| |||||||||||| ||||||||| ||||| ||||||| ||||    
T  39397920 aaaattctatggtgaagtcattagaatgacttttatggtgaagttaacactataacattaaaa 39397982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 52516597 - 52516655
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataaca 74  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  52516597 gaaaaattttatggtgaagtcatgagaatgacttttatggtgaagttaacactataaca 52516655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 4396328 - 4396393
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||| |||||||||| | |||||||||||| ||||||| ||||| |||||||||||||||    
T  4396328 aaaattctatagtgaagtcataaaaatgacttttttagtgaagttaacactataacataaaaaatg 4396393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 35021244 - 35021179
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||  ||||||| |||||||    
T  35021244 aaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacattataacatcaaaaatg 35021179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 20097538 - 20097494
Alignment:
Q  17 aaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  20097538 aaaaattctatggtgaagtcatgagaatgacttttctggtgaagt 20097494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 50697244 - 50697308
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    ||||||||| ||||||||||| | ||||| |||||| ||||||||||||| ||||||||||||||    
T  50697244 aaaattctacggtgaagtcataaaaatgatttttttagtgaagtaaacactataacataaaaaat 50697308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 6864038 - 6864101
Alignment:
Q  19 aaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    ||||| |||||||| |||||||||||||||||||||||||||| | ||| ||||||| ||||||    
T  6864038 aaattgtatggtgatgtcatgagaatgacttttttggtgaagttatcactataacatcaaaaat 6864101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 38812306 - 38812263
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  38812306 aaaattctatggtgaagtcatgagaatgacttttctggtgaagt 38812263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 7703519 - 7703581
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||| | |||||||||||||||||||| ||||||||| ||||| ||||||| ||||    
T  7703519 aaaattctatgttaaagtcatgagaatgacttttctggtgaagttaacactataacatcaaaa 7703581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 17272013 - 17272075
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||| || ||||||||||| ||||||||| ||||| ||||||| ||||    
T  17272013 aaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaa 17272075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 29584407 - 29584345
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||| || ||||||||||| ||||||||| ||||| ||||||| ||||    
T  29584407 aaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaa 29584345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 34948306 - 34948244
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||| ||||| ||||||| ||||    
T  34948306 aaaattttatggtgaagtcatgagaatgacttttctggcgaagttaacactataacatcaaaa 34948244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 36493899 - 36493833
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| || || ||| ||| ||||||    
T  36493899 gaaaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactataccatcaaaaat 36493833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 3042613 - 3042678
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||| |||| | ||||| |||||||||||||| ||||| |||||||| ||||||    
T  3042613 aaaattctatggtgaaatcataaaaatgatttttttggtgaagttaacactataacatacaaaatg 3042678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 4597995 - 4598052
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacat 75  Q
    |||||| |||||||||||||| |||||||||||| ||||||||| ||||| |||||||    
T  4597995 aaaattttatggtgaagtcattagaatgacttttctggtgaagttaacactataacat 4598052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 37663948 - 37663899
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacac 67  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| |||||    
T  37663948 aaaattctatggtgaagtcataagaatgacttttttgatgaagttaacac 37663899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 46884243 - 46884178
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||| |||||||||| | |||||||||||||| ||||| |||||  ||||||||||||||    
T  46884243 aaaattctatagtgaagtcataaaaatgacttttttggcgaagttaacaccgtaacataaaaaatg 46884178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 9139249 - 9139313
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    ||||||||||||||||||||||| | |||||||||||||||||| |||   ||| ||||||||||    
T  9139249 aaaattctatggtgaagtcatgaaattgacttttttggtgaagttaacgttatagcataaaaaat 9139313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 37287735 - 37287798
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgac-ttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||| ||||| ||||||| ||||    
T  37287735 aaaattctatggtgaagtaatgagaatgactttttttggtaaagttaacactataacatcaaaa 37287798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 38811815 - 38811858
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||||||||||||||||| |||| |||||||||    
T  38811815 aaaattctatggtgaagtcatgagaatgatttttctggtgaagt 38811858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 47073703 - 47073660
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  47073703 aaaattctatggtaaagtcatgataatgacttttttggtgaagt 47073660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 55241313 - 55241270
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||||||||||||||||||||||||||||| | |||||||    
T  55241313 aaaattctatggtgaagtcatgagaatgacttttctagtgaagt 55241270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 19089662 - 19089608
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataa 72  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||| ||||| ||||    
T  19089662 aaaattctatggtgaagtcataagaataacttttttgatgaagttaacactataa 19089608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 25701266 - 25701204
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||| |||||||||||||||| ||||||||||||||| |||| ||||  ||||||| ||||    
T  25701266 aaaattttatggtgaagtcatgataatgacttttttggtaaagttaacattataacatcaaaa 25701204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 42199726 - 42199796
Alignment:
Q  13 ttagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||| |||| ||||||||||| |||| ||||||| |||||||||||||| || || ||||||| |||||||    
T  42199726 ttaggaaaaatctatggtgaaatcataagaatgatttttttggtgaagttaatactataacatcaaaaatg 42199796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 4205118 - 4205183
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||||| || |||||||||| || |||||| ||||| |||| || |||||||    
T  4205118 aaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatg 4205183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 33255499 - 33255544
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||||    
T  33255499 gaaaaattatatggtgaagtcacgagaatcacttttttggtgaagt 33255544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 49375968 - 49376017
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttt-tggtgaagtaaaca 66  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  49375968 aaaattctacggtgaagtcatgagaatgactttttctggtgaagttaaca 49376017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 33341395 - 33341459
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||| |||||||||||||||||| |||| ||||||| | ||||| ||| ||| ||||    
T  33341395 gaaaaattctatagtgaagtcatgagaatgatttttctggtgaaattaacactatatcatcaaaa 33341459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 53124289 - 53124353
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    |||||| |||| ||||||||| | ||||| |||||||||||||| ||||| ||||||| ||||||    
T  53124289 aaaattatatgatgaagtcattaaaatgatttttttggtgaagttaacactataacatcaaaaat 53124353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 2704514 - 2704557
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||| |||||||||||||||| |||||||||| |||||||||    
T  2704514 aaaattttatggtgaagtcatgaaaatgacttttctggtgaagt 2704557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 28293283 - 28293240
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||    
T  28293283 aaaattctacgctgaagtcatgagaatgactttttcggtgaagt 28293240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 49878638 - 49878680
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||||||||||||| |||| ||||||||||||||||||||    
T  49878638 aaaattctatggtgaagt-atgataatgacttttttggtgaagt 49878680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 51204581 - 51204624
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||||||||| | |||||||||| |||||||||    
T  51204581 aaaattctatggtgaagtcataaaaatgacttttctggtgaagt 51204624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 54995845 - 54995802
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||| | ||||||||||| ||||||||||||||||||||    
T  54995845 aaaattctacgatgaagtcatgataatgacttttttggtgaagt 54995802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 2266905 - 2266859
Alignment:
Q  15 agaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||| |||||||||||||||| |||||||||| | |||||||    
T  2266905 agaaaaattatatggtgaagtcatgataatgacttttctagtgaagt 2266859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 7152315 - 7152253
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||||  |||||||||| |||| |||| ||||  ||||||| ||||    
T  7152315 aaaattctatggtgaagtcatgctaatgacttttctggtaaagttaacattataacatcaaaa 7152253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 17612338 - 17612372
Alignment:
Q  19 aaattctatggtgaagtcatgagaatgactttttt 53  Q
    |||||||||||||||||||||||||||| ||||||    
T  17612338 aaattctatggtgaagtcatgagaatgattttttt 17612372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 32579446 - 32579508
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||| |||||||||||  |||||||||||||| ||||||||| ||||  ||||||| ||||    
T  32579446 aaaattttatggtgaagttctgagaatgacttttctggtgaagtcaacattataacatcaaaa 32579508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 35025797 - 35025735
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||| ||||||||||| ||||| |||| ||||||||| ||||| ||| ||| ||||    
T  35025797 aaaattctatgctgaagtcatgaaaatgatttttctggtgaagtcaacactatagcatcaaaa 35025735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 37775663 - 37775736
Alignment:
Q  9 aaaattagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||| ||||| ||||||||||| | ||||| |||||||||||||| | ||| |||| || |||||||    
T  37775663 aaaattagaaaa-ttctacggtgaagtcattaaaatgatttttttggtgaagttagcactataatattaaaaatg 37775736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 47236859 - 47236909
Alignment:
Q  11 aattagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||| ||||||||| |||||| ||||| ||||||||| ||||    
T  47236859 aattagaaaaattttatggtgaaatcatgaaaatgatttttttggttaagt 47236909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 9743590 - 9743631
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaa 59  Q
    ||||||||||||| ||||||||  ||||||||||||||||||    
T  9743590 aaaattctatggtaaagtcatgtaaatgacttttttggtgaa 9743631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 879333 - 879292
Alignment:
Q  88 aacaaattatcataatacaaagtcgcggtaaagggtaaggagat 131  Q
    |||||||||||||| ||||||||  |||||||||||||||||||    
T  879333 aacaaattatcatactacaaagt--cggtaaagggtaaggagat 879292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 5048176 - 5048112
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||  |||||| |||||||||| |||| ||||||||| ||| | ||||||| ||||    
T  5048176 gaaaaattctataatgaagttatgagaatgatttttctggtgaagtcaactctataacatcaaaa 5048112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 33816746 - 33816694
Alignment:
Q  14 tagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaaca 66  Q
    |||||||||| |||| | ||||||||||||||| |||| ||||||||| ||||    
T  33816746 tagaaaaattatatgcttaagtcatgagaatgatttttctggtgaagtcaaca 33816694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 8e-25; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 15752025 - 15752091
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  15752025 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaat 15752091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 1547285 - 1547350
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  1547285 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatg 1547350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 10922725 - 10922790
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||| ||||||||| |||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  10922725 aaaattttatggtgaaatcatgagaatgatttttttggtgaagttaacactataacataaaaaatg 10922790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 18422640 - 18422713
Alignment:
Q  9 aaaattagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    |||| ||| ||||||||||||||||||||| | |||||||||||||||||||| ||||| ||||||| ||||||    
T  18422640 aaaaataggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacatcaaaaat 18422713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 10182186 - 10182122
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    ||||||||||||||||||||||| |||||||||||||||||||| || ||  |||||||||||||    
T  10182186 aaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactgtaacataaaaaat 10182122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 37619074 - 37619010
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    |||||||||||||||||| || |||||||||||||||||||||| ||||| ||||||| ||||||    
T  37619074 aaaattctatggtgaagttataagaatgacttttttggtgaagttaacactataacatcaaaaat 37619010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 30254850 - 30254921
Alignment:
Q  12 attagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||| ||||||||||||||||||||| | ||||||||||||| |||||| ||||| ||||||| |||||||    
T  30254850 attaggaaaattctatggtgaagtcataataatgacttttttgatgaagttaacactataacatcaaaaatg 30254921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 27227655 - 27227592
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||  || |||||||||||    
T  27227655 aaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacac--tagcataaaaaatg 27227592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 19899947 - 19899882
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||| | ||||| |||||||||||||| ||||| ||||||| |||||||    
T  19899947 aaaattctatggtgaagtcataataatgatttttttggtgaagttaacactataacatcaaaaatg 19899882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 23999345 - 23999409
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    |||||| |||||||||||||| ||||||| |||||||||||||| ||||| | ||||||||||||    
T  23999345 aaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactacaacataaaaaat 23999409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 30254416 - 30254487
Alignment:
Q  12 attagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||| |||||||||||||||||| || ||||||||||||||| |||||| ||||  ||||||| |||||||    
T  30254416 attaggaaaattctatggtgaagttataagaatgacttttttgttgaagttaacaatataacatcaaaaatg 30254487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 47279161 - 47279204
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  47279161 aaaaatctatggtgaagtcatgagaatgacttttttggtgaagt 47279204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 2959746 - 2959808
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||||| |||||||||| || |||||| ||||| ||||||| ||||    
T  2959746 aaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaa 2959808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 3309146 - 3309208
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||| |||||||||||||||||||| |||| |||| ||||| ||||||| ||||    
T  3309146 aaaattctatggtaaagtcatgagaatgacttttctggtaaagttaacactataacatcaaaa 3309208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 14758039 - 14758101
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||| || |||||||||||||||||||||||| ||||||||| ||||| ||||||| ||||    
T  14758039 aaaattttacggtgaagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaa 14758101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 16415643 - 16415705
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| ||||| ||| ||| ||||    
T  16415643 aaaattctaaggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaa 16415705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 38823212 - 38823274
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||||||||||||||||||| |||| |||| ||||| ||| ||| ||||    
T  38823212 aaaattctatggtgaagtcatgagaatgacttttctggttaagttaacactatagcatcaaaa 38823274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 47682671 - 47682608
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||| |||||||||||||||||| |||||||||||||||||| |||||  || |||||||||||    
T  47682671 aaaattttatggtgaagtcatgagagtgacttttttggtgaagttaacac--tagcataaaaaatg 47682608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 15382931 - 15382996
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||| || | |||||||||||||||||| | ||||| ||||||| |||||||    
T  15382931 aaaattctatggtgaagttataaaaatgacttttttggtgaaattaacactataacatcaaaaatg 15382996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 31621731 - 31621674
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacat 75  Q
    ||||||||| |||||||||||||||||||||||| | ||||||| ||||| |||||||    
T  31621731 aaaattctacggtgaagtcatgagaatgacttttctagtgaagtcaacactataacat 31621674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 32267032 - 32267097
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||| |||||||||||||| |||||||||||||| ||||||| ||||  ||||||| |||||||    
T  32267032 aaaattttatggtgaagtcataagaatgactttttttgtgaagttaacaatataacatcaaaaatg 32267097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 21289663 - 21289723
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaa 78  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||| ||||| ||| ||||||    
T  21289663 aaaaatctattgtgaagtcatgagaatgacttttctggtgaagttaacactatatcataaa 21289723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 41926157 - 41926225
Alignment:
Q  14 tagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    |||||||||||||||||||||| |||| ||||| ||||||| |||||| || || ||||||| ||||||    
T  41926157 tagaaaaattctatggtgaagttatgaaaatgatttttttgatgaagttaatactataacatcaaaaat 41926225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 42721037 - 42721101
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| | | | ||| ||||||||||    
T  42721037 aaaattctatggtgaagtcatgaaaatgatttttttggtgaagttagccctatatcataaaaaat 42721101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 4150533 - 4150490
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  4150533 aaaattctatggtgaagtcatgataatgacttttctggtgaagt 4150490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 28769649 - 28769716
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||||| | ||| |||||||| ||||||| ||||| || |||| |||||||    
T  28769649 gaaaaattctatggtgaagtcataaaaataactttttttgtgaagttaacactatgacatcaaaaatg 28769716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 37451292 - 37451355
Alignment:
Q  26 atggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatgaaataa 89  Q
    ||||||||||||| | ||||||||||||||| |||| ||||| ||||||| ||||||| |||||    
T  37451292 atggtgaagtcataaaaatgacttttttggtaaagttaacactataacatcaaaaatgtaataa 37451355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 43579244 - 43579287
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||||||||||||||||||||||||||||| | |||||||    
T  43579244 aaaattctatggtgaagtcatgagaatgacttttctagtgaagt 43579287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 7079252 - 7079198
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataa 72  Q
    |||||| |||||| ||||||||| |||||||||||||||||||| ||||| ||||    
T  7079252 aaaattttatggtaaagtcatgataatgacttttttggtgaagttaacactataa 7079198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 42663830 - 42663788
Alignment:
Q  19 aaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  42663830 aaattctatggtgaagtcatgataatgacttttttagtgaagt 42663788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 8222129 - 8222194
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||| ||||||||||| | |||||| ||||| ||||||| ||||| ||||||| |||||||    
T  8222129 aaaattctacggtgaagtcataaaaatgacctttttagtgaagttaacactataacatcaaaaatg 8222194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 30327130 - 30327065
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||| |||||||||| | |||||||||||| ||||| | ||||| ||||||| |||||||    
T  30327130 aaaattctatagtgaagtcataaaaatgactttttttgtgaatttaacactataacatcaaaaatg 30327065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 34012555 - 34012498
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacat 75  Q
    ||||||||||||||||||||||| |||||| ||| || |||||| ||||| |||||||    
T  34012555 aaaattctatggtgaagtcatgaaaatgacgtttatgatgaagttaacactataacat 34012498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 238693 - 238641
Alignment:
Q  15 agaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacac 67  Q
    ||||||||||||| ||||||||| || ||| |||||||||||||||| |||||    
T  238693 agaaaaattctatagtgaagtcacgaaaataacttttttggtgaagttaacac 238641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 16132472 - 16132520
Alignment:
Q  13 ttagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||| ||||||||||||||||||||  ||| ||||||||||||||||||    
T  16132472 ttaggaaaattctatggtgaagtcaatagattgacttttttggtgaagt 16132520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 13876965 - 13876922
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||||||||||||| |||| |||||||||| |||||||||    
T  13876965 aaaattctatggtgaagttatgaaaatgacttttatggtgaagt 13876922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 26970263 - 26970306
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||| |||||| ||||||||| ||||||||||||||||||||    
T  26970263 aaaattttatggtaaagtcatgataatgacttttttggtgaagt 26970306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 27267364 - 27267312
Alignment:
Q  29 gtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||| |||||||||||||| |||||  || |||||||||||    
T  27267364 gtgaagtcatgagaatgatttttttggtgaagttaacac--tagcataaaaaatg 27267312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 47279196 - 47279235
Alignment:
Q  27 tggtgaagtcatgagaatgacttttttggtgaagtaaaca 66  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  47279196 tggtgaagtcatgagaatgatttttttggtgaagttaaca 47279235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 22170752 - 22170814
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||| |||||| |||||||||| |  |||||| ||||| ||||||| ||||    
T  22170752 aaaattctatggtgaaatcatgaaaatgacttttctaatgaagttaacactataacatcaaaa 22170814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 11742528 - 11742479
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacac 67  Q
    |||||| ||| ||||||| ||||||||||||||| ||||||||| |||||    
T  11742528 aaaattttatcgtgaagttatgagaatgacttttctggtgaagttaacac 11742479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 33725780 - 33725735
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||| |||||| ||||||||||||| | |||||||    
T  33725780 gaaaaattctatggtaaagtcaagagaatgacttttctagtgaagt 33725735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 46931404 - 46931474
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatga---cttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||||| || |||||||    |||||| ||||||| ||||| ||||||| |||||||    
T  46931404 gaaaaattctatggtgaagttataagaatgaattttttttttgtgaagttaacactataacatcaaaaatg 46931474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 8e-22; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 10555391 - 10555326
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  10555391 aaaattctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatg 10555326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 7891139 - 7891073
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||    
T  7891139 gaaaaattctatggtgaagtcatgagaatgactttttttgtgaagttaacactataacatcaaaaat 7891073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 23854620 - 23854555
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||| |||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  23854620 aaaagtctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatg 23854555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 37970704 - 37970643
Alignment:
Q  22 ttctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  37970704 ttctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaaatg 37970643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 43643784 - 43643719
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||| |||||||    
T  43643784 aaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatg 43643719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 1150301 - 1150229
Alignment:
Q  11 aattagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||| ||| | ||||||| |||||||    
T  1150301 aattaggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacgctataacatcaaaaatg 1150229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 15009243 - 15009306
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaa 81  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||    
T  15009243 aaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaa 15009306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 1204928 - 1204993
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||| || |||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  1204928 aaaattttacggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatg 1204993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 13307624 - 13307686
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||||||| ||||    
T  13307624 aaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactataacatcaaaa 13307686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 30654781 - 30654707
Alignment:
Q  9 aaaattagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||| ||| |||||| |||||||||||||| ||| ||| |||||||||||||| ||||| |||||||||||||||    
T  30654781 aaaaataggaaaattttatggtgaagtcataagagtgatttttttggtgaagttaacactataacataaaaaatg 30654707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 38643979 - 38644041
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||| ||||    
T  38643979 aaaattctatggtgaaatcatgagaatgacttttttggtcaagttaacactataacatcaaaa 38644041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 35736032 - 35735987
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  35736032 gaaaaattctatggtgaagtcattagaatgacttttttggtgaagt 35735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 465837 - 465905
Alignment:
Q  12 attagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||| |||||||||||||| | |||||||||| ||||||||| ||||| ||||||| ||||    
T  465837 attagaaaaattttatggtgaagtcattaaaatgacttttgtggtgaagttaacacgataacatcaaaa 465905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 16222864 - 16222928
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    ||||||||| |||||| ||||||||||||||||| ||||||| | ||||| ||||||||||||||    
T  16222864 aaaattctacggtgaaatcatgagaatgacttttctggtgaatttaacactataacataaaaaat 16222928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 35459887 - 35459823
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    |||||||||||||||||||||||||||||||||||| || |||| || || |||| |||||||||    
T  35459887 aaaattctatggtgaagtcatgagaatgacttttttcgtaaagttaatactataatataaaaaat 35459823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 6446764 - 6446709
Alignment:
Q  6 aacaaaattagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||| |||||||||    
T  6446764 aacaaaaattgaaaaattctatggtgaagtcatgataatgacttttctggtgaagt 6446709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 5300135 - 5300073
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||||| ||| ||| ||||    
T  5300135 aaaattctatggtgaagtcatgagaatgacttttttaatgaagttaacactatagcatcaaaa 5300073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 23176811 - 23176766
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  23176811 gaaaatttctatggtgaagtcatgaaaatgacttttttggtgaagt 23176766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 34894968 - 34895025
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacat 75  Q
    ||||||||||||||||||||||| |||||||||| || |||||| ||||| |||||||    
T  34894968 aaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacat 34895025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 41362519 - 41362568
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacac 67  Q
    |||||||||||||||||| |||| |||||||||||||||||||| |||||    
T  41362519 aaaattctatggtgaagttatgaaaatgacttttttggtgaagttaacac 41362568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 6098707 - 6098643
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| || || ||| ||| ||||||    
T  6098707 aaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactatagcatcaaaaat 6098643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 8803995 - 8803934
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||||||    ||||||||||||||||||| ||||| ||||||| |||||||    
T  8803995 aaaattctatggtgaagtcat----atgacttttttggtgaagttaacactataacatcaaaaatg 8803934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 16447069 - 16447002
Alignment:
Q  13 ttagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||| ||||||||||||||||||||||| |||||||||| || | |||| ||||| ||||||| ||||    
T  16447069 ttaggaaaattctatggtgaagtcatgaaaatgacttttctgataaagttaacactataacatcaaaa 16447002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 27083032 - 27082965
Alignment:
Q  13 ttagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||| ||||||||||||||||||||| ||| |||||||| ||||||||| ||||| ||| ||| ||||    
T  27083032 ttaggaaaattctatggtgaagtcatcagactgacttttctggtgaagttaacactatagcatcaaaa 27082965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 5018013 - 5018055
Alignment:
Q  19 aaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  5018013 aaattctatggtgaagtcatgataatgacttttttagtgaagt 5018055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 7998364 - 7998402
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggt 56  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  7998364 aaaattctatggtgaagtcatgagaatgacttttctggt 7998402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 12876101 - 12876175
Alignment:
Q  9 aaaattagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||| | ||||||||||||| |||||| || |||||||||| || |||||| ||||| |||| ||||||||||    
T  12876101 aaaatttggaaaattctatggttaagtcacgaaaatgacttttctgatgaagttaacactataatataaaaaatg 12876175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 24823461 - 24823407
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataa 72  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||| ||||| ||||    
T  24823461 aaaatactatggtaaagttatgagaatgacttttttggtgaagttaacactataa 24823407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 4133197 - 4133148
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacac 67  Q
    |||||| |||||| ||||||| |||||||||||||||||||||| |||||    
T  4133197 aaaattttatggtcaagtcatcagaatgacttttttggtgaagttaacac 4133148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 33906225 - 33906274
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacac 67  Q
    |||||||||||||||| | ||||||||||||||| ||||||||| |||||    
T  33906225 aaaattctatggtgaaattatgagaatgacttttctggtgaagtcaacac 33906274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 36695155 - 36695090
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||||| || |||||||||| || |||||| ||||| |||| || |||||||    
T  36695155 aaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatg 36695090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 39099298 - 39099265
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgactttt 51  Q
    ||||||||||||||||||||||||||||||||||    
T  39099298 aaaattctatggtgaagtcatgagaatgactttt 39099265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 1835440 - 1835392
Alignment:
Q  13 ttagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||| ||||||||||||||||||  | ||||||||||||||||||||||    
T  1835440 ttaggaaaattctatggtgaagttgttagaatgacttttttggtgaagt 1835392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 1879281 - 1879233
Alignment:
Q  13 ttagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||| ||||||||||||||||||  | ||||||||||||||||||||||    
T  1879281 ttaggaaaattctatggtgaagttgttagaatgacttttttggtgaagt 1879233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 4108958 - 4108915
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||    
T  4108958 aaaattttatggtgaagtcatgaaaatgacttttttggtaaagt 4108915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 8151453 - 8151415
Alignment:
Q  23 tctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  8151453 tctatggtgcagtcatgaaaatgacttttttggtgaagt 8151415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 11727037 - 11727087
Alignment:
Q  30 tgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||| |||||||||| |||||||||||||| ||||| ||||||| ||||    
T  11727037 tgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaa 11727087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 44869497 - 44869559
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||| |||||| | || ||||| |||||||||||||||| ||||| ||||||| ||||    
T  44869497 aaaattctacggtgaaattataagaataacttttttggtgaagttaacactataacattaaaa 44869559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 31934075 - 31934026
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacac 67  Q
    |||||||||  ||||||| |||||||||| |||||||||||||| |||||    
T  31934075 aaaattctaacgtgaagttatgagaatgatttttttggtgaagttaacac 31934026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 41191058 - 41191022
Alignment:
Q  25 tatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  41191058 tatggtgaagttatgaaaatgacttttttggtgaagt 41191022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 8e-22; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 51213164 - 51213099
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  51213164 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactgtaacataaaaaatg 51213099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 40552442 - 40552377
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| |||||||    
T  40552442 aaaattctatggtgaagtcatgagaatgacttttttggagaagttaacactataacatcaaaaatg 40552377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 46297945 - 46297881
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||| ||||||| ||||||    
T  46297945 aaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacactataacatcaaaaat 46297881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 11835789 - 11835740
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacac 67  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  11835789 aaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacac 11835740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 29099356 - 29099413
Alignment:
Q  26 atggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||| |||||||||||| ||||||||| ||||| |||||||||||||||    
T  29099356 atggtgaagtcattagaatgacttttctggtgaagttaacactataacataaaaaatg 29099413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 35844319 - 35844384
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| ||||| ||||||  |||||||    
T  35844319 aaaattctatggtgaagtcatgataatgacttttctggtgaagttaacactataacaacaaaaatg 35844384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 48354934 - 48354999
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| ||||| |||| || |||||||    
T  48354934 aaaattctatggtgaagtcatgagaatgatttttatggtgaagttaacactataatattaaaaatg 48354999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 3655392 - 3655320
Alignment:
Q  11 aattagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||| |||||| |||||||||||||| | ||||||||||||| | |||| ||||| |||||||||||||||    
T  3655392 aattaggaaaattttatggtgaagtcataaaaatgacttttttgataaagttaacactataacataaaaaatg 3655320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 7327671 - 7327603
Alignment:
Q  13 ttagaaaaattctatggtgaagtcatgagaatgacttttttggtgaag-taaacacaataacataaaaa 80  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||| ||||||| ||||||| ||||    
T  7327671 ttaggaaaattctatggtgaagttatgagaatgacttttttagtgaagttaaacactataacatcaaaa 7327603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 53818564 - 53818512
Alignment:
Q  9 aaaattagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||| |||||||||||||||||||||| |||| |||||||||    
T  53818564 aaaattagaaaaattttatggtgaagtcatgagaatgatttttctggtgaagt 53818512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 40640680 - 40640637
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  40640680 aaaattctatggtgaagtcatgagaatgacttttctggtgaagt 40640637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 4015453 - 4015515
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||||||||||||||||||| || |||||| ||||| ||| ||| ||||    
T  4015453 aaaattctatggtgaagtcatgagaatgacttttctgatgaagttaacactatagcatcaaaa 4015515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 21193590 - 21193648
Alignment:
Q  9 aaaattagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacac 67  Q
    ||||| || ||||||||||||| |||||||||||||||||||| ||||||||| |||||    
T  21193590 aaaataaggaaaattctatggtaaagtcatgagaatgacttttctggtgaagttaacac 21193648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 22450961 - 22451023
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| ||| ||||    
T  22450961 aaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactatagcatcaaaa 22451023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 26941443 - 26941389
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataa 72  Q
    ||||||||||||||||||||| ||||||| |||||||||||||| ||||| ||||    
T  26941443 aaaattctatggtgaagtcataagaatgatttttttggtgaagttaacactataa 26941389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 37157701 - 37157763
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||||| |||| |||||||| |||||| ||||| ||||||| ||||    
T  37157701 aaaattctatggtgaagtcatgaaaatggcttttttgatgaagttaacactataacatcaaaa 37157763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 38392673 - 38392631
Alignment:
Q  19 aaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  38392673 aaattatatggtgaagtcatgagaatgacttttttggtgaagt 38392631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 43348282 - 43348322
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtga 58  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  43348282 aaaattctatggtgaagtcatgagaatgatttttttggtga 43348322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 49359674 - 49359631
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  49359674 aaaattctatggtgaagtcatgaaaatgactttttttgtgaagt 49359631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 27480562 - 27480500
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||| |||||||||||||||||  |||||||| |||| ||||| ||||||| ||||    
T  27480562 aaaattctatgatgaagtcatgagaatgatatttttggtaaagtcaacactataacatcaaaa 27480500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 37203060 - 37203122
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||| | ||||| ||||||| |||||| ||||| ||||||| ||||    
T  37203060 aaaattctatggtgaagtcataaaaatgatttttttgatgaagttaacactataacatcaaaa 37203122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 45174496 - 45174558
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||| |||||||||||  ||||||| |||||||||||||||| ||||| ||||||| ||||    
T  45174496 aaaattttatggtgaagttgtgagaataacttttttggtgaagttaacactataacatcaaaa 45174558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 52041106 - 52041044
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||  |||||||||||||||||||||||| ||||||||| || || ||||||| ||||    
T  52041106 aaaattctgaggtgaagtcatgagaatgacttttctggtgaagttaatactataacatcaaaa 52041044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 11466817 - 11466874
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacat 75  Q
    ||||||||||||||||||| |||||||||||||| || |||||| || || |||||||    
T  11466817 aaaattctatggtgaagtcttgagaatgacttttctgatgaagttaagactataacat 11466874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 20373479 - 20373414
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||| ||| |||||||||| ||||||| |||||||||||||| || || ||||||| |||||||    
T  20373479 aaaattttatagtgaagtcataagaatgatttttttggtgaagttaatactataacatcaaaaatg 20373414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 47481515 - 47481580
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||| ||||||||||||||  ||||||  ||||||||||||| ||||| ||||||| |||||||    
T  47481515 aaaattttatggtgaagtcataggaatgatgtttttggtgaagttaacactataacatcaaaaatg 47481580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 54828886 - 54828821
Alignment:
Q  15 agaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||| |||||||||||||| | ||| | ||||||||| |||| ||||| ||||||||||||    
T  54828886 agaaaaattttatggtgaagtcataaaaataatttttttggtaaagttaacactataacataaaaa 54828821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 43976068 - 43976032
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttg 54  Q
    |||||| ||||||||||||||||||||||||||||||    
T  43976068 aaaattttatggtgaagtcatgagaatgacttttttg 43976032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 45879549 - 45879501
Alignment:
Q  13 ttagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||| ||||||||||| |||||||||||||||||||||| |||| ||||    
T  45879549 ttaggaaaattctatgctgaagtcatgagaatgacttttctggtaaagt 45879501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 55343467 - 55343403
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    |||||||||||||||||||| || |||||||||| || |||||| ||||| |||| || ||||||    
T  55343467 aaaattctatggtgaagtcacgaaaatgacttttctgatgaagttaacactataatatcaaaaat 55343403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 42665587 - 42665544
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||    
T  42665587 aaaattctatggtgaagttatgataatgatttttttggtgaagt 42665544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 47930712 - 47930669
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||||||||||| ||||| |||| |||||||||    
T  47930712 aaaattctatggtgaagtcatgaaaatgatttttctggtgaagt 47930669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 53812022 - 53811979
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||| |||||||||||||||||||||||| || ||||||    
T  53812022 aaaattctacggtgaagtcatgagaatgacttttctgatgaagt 53811979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 4556543 - 4556585
Alignment:
Q  19 aaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||||||||||||||||| |||||||||| | |||||||    
T  4556543 aaattctatggtgaagtcatgaaaatgacttttctcgtgaagt 4556585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 5124671 - 5124713
Alignment:
Q  19 aaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||| |||| | ||||||||||||||||||||    
T  5124671 aaattctatggtgaaatcattaaaatgacttttttggtgaagt 5124713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 23165883 - 23165841
Alignment:
Q  19 aaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||||||||||||||||| ||||| |||||| |||||||    
T  23165883 aaattctatggtgaagtcatgataatgatttttttagtgaagt 23165841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 44186684 - 44186622
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||| |||||||  |||||||| |||||||||||||| ||||| ||| ||| ||||    
T  44186684 aaaattctatgatgaagtcgagagaatgatttttttggtgaagttaacactatagcatcaaaa 44186622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 44891500 - 44891561
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||| || ||||||||||||| |||||| ||||||||||||| ||||| ||||||| ||||    
T  44891500 aaaattatacggtgaagtcatgaaaatgac-tttttggtgaagttaacactataacatcaaaa 44891561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 46994833 - 46994771
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||| ||||||||| | ||||||| |||||||||||||| || || ||||||| ||||    
T  46994833 aaaattctacggtgaagtcgtaagaatgatttttttggtgaagttaatactataacatcaaaa 46994771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 11357535 - 11357486
Alignment:
Q  31 gaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||| ||||||||| ||||| ||| ||| ||||    
T  11357535 gaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaa 11357486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 54505801 - 54505866
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||| |||| |||||||   ||||||||||||||| |||||| ||||| ||||||| |||||||    
T  54505801 aaaattttatgatgaagtcgcaagaatgacttttttgttgaagttaacactataacatcaaaaatg 54505866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 4761834 - 4761767
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgac--ttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||| |||||||| ||||  |||||||||||||| || || |||| || |||||||    
T  4761834 aaaattctatggtgaattcatgagattgacttttttttggtgaagttaatactataatatcaaaaatg 4761767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 22446247 - 22446199
Alignment:
Q  19 aaattctatggtgaagtcatgagaatgactt-ttttggtgaagtaaaca 66  Q
    |||||||| ||||||||||||| |||||||| |||||||||||| ||||    
T  22446247 aaattctacggtgaagtcatgaaaatgactttttttggtgaagttaaca 22446199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 32373466 - 32373498
Alignment:
Q  19 aaattctatggtgaagtcatgagaatgactttt 51  Q
    |||||||||| ||||||||||||||||||||||    
T  32373466 aaattctatgatgaagtcatgagaatgactttt 32373498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 5e-20; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 18797306 - 18797369
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  18797306 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacac--taacataaaaaatg 18797369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 17842770 - 17842705
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||| | |||||||||||||||||||| ||||| |||||||||||||||    
T  17842770 aaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatg 17842705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 24211718 - 24211783
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||||    
T  24211718 aaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatg 24211783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 37109849 - 37109914
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||| | |||||||||||||||||||| ||||| |||||||||||||||    
T  37109849 aaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatg 37109914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 26524511 - 26524446
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||||||||||||||||||| |||||| || ||||| ||||||| |||||||    
T  26524511 aaaattctatggtgaagtcatgagaatgacttttctggtgatgttaacactataacatcaaaaatg 26524446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 241067 - 241021
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaa 64  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  241067 aaaattctatggtgaagtcatgaaaatgacttttttggtgaagtaaa 241021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 5657665 - 5657603
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||| ||||    
T  5657665 aaaattctatggtgaagtcatgagaatgacttttctagtgaagttaacactataacatcaaaa 5657603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 31579258 - 31579188
Alignment:
Q  13 ttagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||| ||||||||||||||||||||| ||||| | |||||||||||||| ||||| ||||||| |||||||    
T  31579258 ttaggaaaattctatggtgaagtcataagaataatttttttggtgaagttaacactataacatcaaaaatg 31579188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 48928747 - 48928685
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||||| ||||    
T  48928747 aaaattttatggtgaagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaa 48928685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 7334771 - 7334832
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaa 79  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||| ||||| |||||||||||    
T  7334771 aaaattctacggtgaagtcgtgagaatgacttttttgatgaagttaacactataacataaaa 7334832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 25691732 - 25691667
Alignment:
Q  15 agaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||| ||||||||||||||||||||||||||| | ||||||| ||||| ||||||| ||||    
T  25691732 agaaaaattttatggtgaagtcatgagaatgacttttctcgtgaagttaacactataacatcaaaa 25691667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 32821237 - 32821172
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| ||||  ||||||| |||||||    
T  32821237 aaaattctatggtgaagtcatgaaaatgatttttttggtgaagttaacaatataacatcaaaaatg 32821172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 38258522 - 38258587
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||| ||||||||||| | ||||| |||||||||||||| ||||| |||||||||||||||    
T  38258522 aaaattctacggtgaagtcataaaaatgatttttttggtgaagttaacactataacataaaaaatg 38258587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 27421565 - 27421501
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||| ||| ||||| |||||||||||||| ||||| ||||||| ||||    
T  27421565 gaaaaattctatggtgaagtcgtgataatgatttttttggtgaagttaacactataacatcaaaa 27421501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 23111164 - 23111231
Alignment:
Q  15 agaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    ||||||||||| |||||||||||||| ||||| |||| ||||||||| ||||| ||||||| ||||||    
T  23111164 agaaaaattctgtggtgaagtcatgaaaatgatttttctggtgaagttaacactataacatcaaaaat 23111231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 12390814 - 12390752
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||| |||  ||||||||||||||||| ||||| ||||||| ||||    
T  12390814 aaaattctatggtgaagtcatcagatcgacttttttggtgaagttaacactataacatcaaaa 12390752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 9356010 - 9355945
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||| |||||||||||||||||||||||  |||||||||| | ||||| ||| |||||||||||    
T  9356010 aaaattttatggtgaagtcatgagaatgaccattttggtgaatttaacactatagcataaaaaatg 9355945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 27283721 - 27283786
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||| || | ||||| |||||||||||||| ||||| ||||||| |||||||    
T  27283721 aaaattctatggtgaagttataaaaatgatttttttggtgaagttaacactataacatcaaaaatg 27283786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 43686018 - 43686083
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||||| || ||||||||||| |||||||| ||||| |||| || |||||||    
T  43686018 aaaattctatggtgaagtcacgaaaatgactttttgggtgaagttaacactataatatcaaaaatg 43686083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 3953732 - 3953776
Alignment:
Q  17 aaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||||||| |||||||||||||||||||||| |||||||||    
T  3953732 aaaaattctatgatgaagtcatgagaatgacttttctggtgaagt 3953776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 8299190 - 8299241
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacac 67  Q
    |||||||||||||||||||||| || |||||||||| ||||||||| |||||    
T  8299190 gaaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacac 8299241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 23402417 - 23402374
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  23402417 aaaattctatggcgaagtcatgagaatgacttttctggtgaagt 23402374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 8861262 - 8861324
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||||||||||||||||||| | | ||||| ||||| ||| ||| ||||    
T  8861262 aaaattctatggtgaagtcatgagaatgacttttctcgcgaagttaacactatagcatcaaaa 8861324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 21991613 - 21991675
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||| ||||| ||| ||| ||||    
T  21991613 aaaattctagggtgaagtcatgagaatgatttttatggtgaagttaacactatagcatcaaaa 21991675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 15612942 - 15612885
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacat 75  Q
    ||||||||||||||||||||||||||| || ||| | ||||||| ||||| |||||||    
T  15612942 aaaattctatggtgaagtcatgagaataacgtttcttgtgaagttaacactataacat 15612885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 22687228 - 22687281
Alignment:
Q  30 tgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||||||| || |||||| ||||| ||||||| |||||||    
T  22687228 tgaagtcatgagaatgacttttctgatgaagttaacactataacatcaaaaatg 22687281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 31520907 - 31520843
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    |||||| |||| ||||||||||| |||||||||||||||||||| || || ||| ||| ||||||    
T  31520907 aaaattttatgatgaagtcatgaaaatgacttttttggtgaagttaatactataccatcaaaaat 31520843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 37346999 - 37347063
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    |||||| |||||||||||||||| ||||| |||||||||||||| || || ||| ||| ||||||    
T  37346999 aaaattttatggtgaagtcatgaaaatgatttttttggtgaagttaatactataccatcaaaaat 37347063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 48928466 - 48928418
Alignment:
Q  32 aagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||| ||||    
T  48928466 aagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaa 48928418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 4582896 - 4582939
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||||||||||||||| || |||||||||| |||||||||    
T  4582896 aaaattctatggtgaagtcacgaaaatgacttttctggtgaagt 4582939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 30055503 - 30055538
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgactttttt 53  Q
    ||||||||||||||||||||| ||||||||||||||    
T  30055503 aaaattctatggtgaagtcataagaatgactttttt 30055538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 40381942 - 40381985
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||    
T  40381942 aaaattctacggtgaagttatgagaatgacttttctggtgaagt 40381985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 44413566 - 44413499
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgactt-ttttggtgaagtaaacacaataacataaaaaat 82  Q
    ||||||||||||||| ||||||||| |||||||| ||||  |||||| ||||| ||||||| ||||||    
T  44413566 gaaaaattctatggtaaagtcatgaaaatgactttttttaatgaagttaacactataacatcaaaaat 44413499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 6546496 - 6546558
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||| ||||||| |||| | ||||||| ||||| ||| ||| ||||    
T  6546496 aaaattctatggtgaagtcataagaatgatttttctagtgaagttaacactatagcatcaaaa 6546558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 10359398 - 10359360
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggt 56  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  10359398 aaaattctatggtgaagtcatgataatgacttttctggt 10359360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 32432429 - 32432483
Alignment:
Q  13 ttagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacac 67  Q
    |||| |||||||||||||||||||| || ||||| |||| ||||||||| |||||    
T  32432429 ttaggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacac 32432483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 33688445 - 33688384
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||| ||||||||||| ||||||||||||||| |||| |||| ||||| ||||||| ||||    
T  33688445 aaaattatatggtgaagttatgagaatgacttttctggt-aagttaacactataacatcaaaa 33688384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 10481580 - 10481645
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgac-ttttttggtgaagtaaacacaataacataaaaaat 82  Q
    ||||||||||||| |||| | ||||||||| ||||||  |||||| ||||| ||||||||||||||    
T  10481580 aaaattctatggtaaagttaggagaatgactttttttaatgaagttaacactataacataaaaaat 10481645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 22955352 - 22955315
Alignment:
Q  24 ctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  22955352 ctatggtgaagtaatgagaatgacttttctggtgaagt 22955315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 41765262 - 41765229
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgactttt 51  Q
    ||||||| ||||||||||||||||||||||||||    
T  41765262 aaaattccatggtgaagtcatgagaatgactttt 41765229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 46481251 - 46481218
Alignment:
Q  28 ggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||| ||||||||||||||||||||    
T  46481251 ggtgaagtcatgaaaatgacttttttggtgaagt 46481218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 10675377 - 10675345
Alignment:
Q  19 aaattctatggtgaagtcatgagaatgactttt 51  Q
    |||||||||||||||||||||| ||||||||||    
T  10675377 aaattctatggtgaagtcatgataatgactttt 10675345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 19786279 - 19786315
Alignment:
Q  15 agaaaaattctatggtgaagtcatgagaatgactttt 51  Q
    |||||||||||| | ||||||||||||||||||||||    
T  19786279 agaaaaattctacgatgaagtcatgagaatgactttt 19786315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 5e-20; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 4319005 - 4318943
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||    
T  4319005 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaa 4318943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 5627393 - 5627457
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  5627393 aaaattctaaggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaat 5627457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 7055397 - 7055333
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    |||||| |||||||||||||| ||||||| |||||||||||||| ||||| ||||||||||||||    
T  7055397 aaaattttatggtgaagtcataagaatgatttttttggtgaagttaacactataacataaaaaat 7055333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 30353542 - 30353478
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||  ||||||| ||||    
T  30353542 gaaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattataacatcaaaa 30353478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 8513235 - 8513289
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataa 72  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||    
T  8513235 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataa 8513289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 20768088 - 20768150
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| ||| ||| ||||    
T  20768088 aaaattctatggtgaagtcatgagaatgacttttctggtgaagtcaacactatagcatcaaaa 20768150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 1945826 - 1945901
Alignment:
Q  9 aaaattagaaaaattctatggtgaagtcatgagaatgac-ttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||| || ||||||||| ||||||||||| |||||||| |||||||||||||| ||||| ||||||| |||||||    
T  1945826 aaaataaggaaaattctacggtgaagtcataagaatgactttttttggtgaagttaacactataacatcaaaaatg 1945901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 6088908 - 6088959
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacac 67  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||| |||||    
T  6088908 gaaaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacac 6088959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 7235216 - 7235154
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||| |||||||||||||||  |||||||| ||||| ||||||| ||||    
T  7235216 aaaattctatggtgaagttatgagaatgacttttccggtgaagtcaacactataacatcaaaa 7235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 29182162 - 29182227
Alignment:
Q  15 agaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||| |||||||||||||||||||||| ||| ||| |||||| ||||| ||||||| ||||    
T  29182162 agaaaaattttatggtgaagtcatgagaatgattttattgatgaagttaacactataacatcaaaa 29182227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 3880121 - 3880073
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaaca 66  Q
    |||||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  3880121 aaaattctatggtgaagtcacgagaatgacttttctggtgaagttaaca 3880073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 3005439 - 3005396
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||    
T  3005439 aaaattctatgttgaagtcatgagaatgacttttttgatgaagt 3005396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 19631751 - 19631794
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||||||||| |||||||||||| |||||||||    
T  19631751 aaaattctatggtgaagtcataagaatgacttttctggtgaagt 19631794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 30338469 - 30338521
Alignment:
Q  9 aaaattagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||| ||||||||||||||| ||||||  |||||||||||||||| |||||||    
T  30338469 aaaagtagaaaaattctatgatgaagttgtgagaatgacttttttagtgaagt 30338521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 21017297 - 21017246
Alignment:
Q  15 agaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaaca 66  Q
    ||||||||| || |||||||||| || |||||||||||||||||||| ||||    
T  21017297 agaaaaattatacggtgaagtcacgaaaatgacttttttggtgaagttaaca 21017246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 6614085 - 6614039
Alignment:
Q  15 agaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||| ||||||||| |||| |||||||||||| |||||||||    
T  6614085 agaaaaattatatggtgaaatcataagaatgacttttctggtgaagt 6614039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 33893184 - 33893122
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||| ||||||| ||||| | |||||| ||||||| ||||| ||||||| ||||    
T  33893184 aaaattctatggtaaagtcattagaataatttttttagtgaagttaacactataacatcaaaa 33893122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 18498435 - 18498483
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaaca 66  Q
    |||| ||||| ||||||||||||||||||||||  ||||||||| ||||    
T  18498435 aaaaatctatagtgaagtcatgagaatgactttcctggtgaagttaaca 18498483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 15724492 - 15724554
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| ||||    
T  15724492 aaaattctatggtgaagttatgagaatgacttttttggtgaagttaacactataacatcaaaa 15724554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 14409499 - 14409434
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||||||| |||||||    
T  14409499 aaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaacactataacatcaaaaatg 14409434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 5112486 - 5112422
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    |||||| |||||||||||||||| |||||||||||||||||||| || || ||||||||||||||    
T  5112486 aaaattttatggtgaagtcatgaaaatgacttttttggtgaagttaatactataacataaaaaat 5112422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 12910352 - 12910416
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    ||||||||||||||||||||||| |||||||||||||||||||| || || ||||||| ||||||    
T  12910352 aaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactataacatcaaaaat 12910416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 25501105 - 25501037
Alignment:
Q  12 attagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| ||| ||| ||||    
T  25501105 attagaaaaattctatggtgaagtcatgagaatgacttttctggtaaagttaacactatagcatcaaaa 25501037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 26317857 - 26317793
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||| ||||||    
T  26317857 aaaattctatgatgaagtcatgaaaatgacttttttggtgaagttaacactataacatcaaaaat 26317793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 22974255 - 22974192
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaa 81  Q
    |||||||||||||||||| |||||||||| |||||||||||||| ||||| ||||||| |||||    
T  22974255 aaaattctatggtgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaaa 22974192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 8742060 - 8741998
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| ||| ||| ||||    
T  8742060 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaa 8741998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 19119861 - 19119923
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| ||| ||| ||||    
T  19119861 aaaattctatggtgaagtcatgagaatgacttttgtggtgaagttaacactatagcatcaaaa 19119923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 31705784 - 31705719
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||| | ||||| |||||||||||||| ||||| ||||||| |||||||    
T  31705784 aaaattctatggtgaagtcataaaaatgatttttttggtgaagttaacactataacatcaaaaatg 31705719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 35826656 - 35826591
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| || || ||||||| |||||||    
T  35826656 aaaattctatggtgaagtcatgataatgactttttttgtgaagttaatactataacatcaaaaatg 35826591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 27318662 - 27318595
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||| | ||||||||||||||||||| |||| ||||||||| ||||| | |||||||||||||    
T  27318662 gaaaaattcaacggtgaagtcatgagaatgatttttctggtgaagttaacactaaaacataaaaaatg 27318595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 699150 - 699216
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    |||||||| ||||||||||| ||||||||||||||| || |||||| ||||| ||| ||||||||||    
T  699150 gaaaaattttatggtgaagttatgagaatgacttttctgatgaagttaacactatagcataaaaaat 699216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 7693232 - 7693294
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||| | |||||||||| ||||||||| ||||| ||||||| ||||    
T  7693232 aaaattctatggtgaagtcattaaaatgacttttctggtgaagttaacactataacatcaaaa 7693294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 16004550 - 16004484
Alignment:
Q  18 aaaattctatggtgaagtcatgagaa-tgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||| ||||| ||||||| |||||||    
T  16004550 aaaattctatggtaaagtcatgagaattgacttttctggtgaagttaacactataacatcaaaaatg 16004484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 27330308 - 27330370
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||| || ||||||||||| ||||||||| ||||| ||||||| ||||    
T  27330308 aaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaacactataacatcaaaa 27330370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 31786819 - 31786754
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||| |||||||  |||||||||||||||||||||||| ||||| ||| ||| |||||||    
T  31786819 aaaattctatagtgaagtagtgagaatgacttttttggtgaagttaacactatagcatgaaaaatg 31786754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 39572821 - 39572886
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||||||||||||||||||| | || |||| || || |||| ||||||||||    
T  39572821 aaaattctatggtgaagtcatgagaatgacttttctagttaagttaatactataatataaaaaatg 39572886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 1429318 - 1429254
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    |||| |||||||||||||||||| ||||||| |||||||||||| ||||| ||| ||| ||||||    
T  1429318 aaaaatctatggtgaagtcatgaaaatgactcttttggtgaagttaacactatagcatcaaaaat 1429254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 22616496 - 22616539
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  22616496 aaaattctatggtgaagtcatgaaaatgacttttctggtgaagt 22616539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 26411295 - 26411338
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||    
T  26411295 aaaattctatggtgaagtcattagaatgatttttttggtgaagt 26411338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 8466747 - 8466809
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||| |||||  |||||| ||||    
T  8466747 aaaattctatgatgaggtcatgagaatgacttttctggtgaagttaacactgtaacatcaaaa 8466809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 35933904 - 35933953
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacac 67  Q
    |||||| |||||||||||||||||||||| ||||||| |||||| |||||    
T  35933904 aaaattgtatggtgaagtcatgagaatgatttttttgatgaagttaacac 35933953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 36860425 - 36860490
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||||| || ||||| |||| ||||||||| ||||| |||  ||||||||||    
T  36860425 aaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactatagtataaaaaatg 36860490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 5837555 - 5837599
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaag 60  Q
    ||||||||||| |||||| ||||||||||||||||| ||||||||    
T  5837555 gaaaaattctacggtgaattcatgagaatgacttttctggtgaag 5837599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 24886104 - 24886171
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgac--ttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||| ||||||||| |||||||||||||  |||||||||||||| || || ||||||| |||||||    
T  24886104 aaaattttatggtgaaatcatgagaatgacttttttttggtgaagttaatactataacatcaaaaatg 24886171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 36866764 - 36866828
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    |||||||||||||||||||| || ||||| |||| ||||||||| ||||| |||| || ||||||    
T  36866764 aaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactataatatcaaaaat 36866828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 40133387 - 40133435
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaaca 66  Q
    |||||||||||||||||||| || |||||||||| ||||||||| ||||    
T  40133387 aaaattctatggtgaagtcacgaaaatgacttttgtggtgaagttaaca 40133435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 7209038 - 7208971
Alignment:
Q  17 aaaaattctatggtgaagtcatgagaatgactt-ttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||| ||||||||||| | |||||||| |||||||||||| ||||   ||||||||||||||    
T  7209038 aaaaattctacggtgaagtcataaaaatgactttttttggtgaagttaacattgtaacataaaaaatg 7208971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 26268075 - 26268138
Alignment:
Q  17 aaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||  |||||||||||||||||| |||| ||||||||| ||||| ||| ||| ||||    
T  26268075 aaaaattctacagtgaagtcatgagaatgatttttctggtgaagttaacactatagcatcaaaa 26268138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 9200235 - 9200297
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||| |||||||||||||| | ||| |||||| ||||||||| ||||| ||||||| ||||    
T  9200235 aaaattttatggtgaagtcattaaaataacttttctggtgaagttaacactataacatcaaaa 9200297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 12081322 - 12081284
Alignment:
Q  15 agaaaaattctatggtgaagtcatgagaatgactttttt 53  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  12081322 agaaaaattatatggtgaagttatgagaatgactttttt 12081284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 13380498 - 13380540
Alignment:
Q  19 aaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||| ||||||||||||||||||||||||||| | |||||||    
T  13380498 aaattttatggtgaagtcatgagaatgacttttctagtgaagt 13380540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 13956518 - 13956456
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||| ||||||||||||| |||||||||| |  |||||| ||||| ||||||| ||||    
T  13956518 aaaattctacggtgaagtcatgaaaatgacttttctcatgaagttaacactataacatcaaaa 13956456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 17158206 - 17158138
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttg---gtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||| | ||||| ||||||    ||||||| ||||| |||||||||||||||    
T  17158206 aaaattctatggtgaagtcataaaaatgatttttttttttgtgaagttaacactataacataaaaaatg 17158138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 23116395 - 23116333
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||| ||||||| ||||||||||||  |||||| ||||  ||||||| ||||    
T  23116395 aaaattctatggtgacgtcatgaaaatgactttttttatgaagttaacattataacatcaaaa 23116333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 32563151 - 32563213
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||| | ||||| |||| || |||||| ||||| ||||||| ||||    
T  32563151 aaaattctatggtgaagtcattaaaatgatttttctgatgaagttaacactataacatcaaaa 32563213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 38528409 - 38528347
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||||| ||||  |||| || |||||| ||||| ||||||| ||||    
T  38528409 aaaattctatggtgaagtcatgaaaatggtttttctgatgaagttaacactataacatcaaaa 38528347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 5748437 - 5748478
Alignment:
Q  25 tatggtgaagtcatgagaatgacttttttggtgaagtaaaca 66  Q
    |||| ||||||||||| |||||||||||||||||||| ||||    
T  5748437 tatgatgaagtcatgaaaatgacttttttggtgaagttaaca 5748478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 12164967 - 12164926
Alignment:
Q  13 ttagaaaaattctatggtgaagtcatgagaatgacttttttg 54  Q
    |||| |||||| || |||||||||||||||||||||||||||    
T  12164967 ttaggaaaattttacggtgaagtcatgagaatgacttttttg 12164926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 22980795 - 22980844
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacac 67  Q
    |||||| |||| |||||| ||||||||||||||| ||||||||| |||||    
T  22980795 aaaattttatgatgaagttatgagaatgacttttctggtgaagttaacac 22980844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 33163513 - 33163554
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtg 57  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  33163513 gaaaaattctatggtgaagtcatgaaaatgattttttcggtg 33163554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 53
Target Start/End: Complemental strand, 43308818 - 43308790
Alignment:
Q  25 tatggtgaagtcatgagaatgactttttt 53  Q
    |||||||||||||||||||||||||||||    
T  43308818 tatggtgaagtcatgagaatgactttttt 43308790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 17054297 - 17054232
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||||||| ||||||||||||||||||||| || || ||||||| |||||||    
T  17054297 aaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaatactataacatcaaaaatg 17054232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 17071938 - 17071873
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||  |||||||    
T  17071938 aaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaacactataacaacaaaaatg 17071873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 33551187 - 33551122
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| ||||| ||||||| |||||||    
T  33551187 aaaattctacggtgaagtcatgagaatgacttttttagtgaagttaacactataacatcaaaaatg 33551122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 41643870 - 41643917
Alignment:
Q  14 tagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41643870 tagaaaaattctatggtgaagtcatgataatgacttttttggtgaagt 41643917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 11366582 - 11366517
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||| |||| |||||||||||||||||||| | ||||| ||||||| |||||||    
T  11366582 aaaattctatggtgaaatcataagaatgacttttttggtgaaattaacactataacatcaaaaatg 11366517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 41465511 - 41465560
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacac 67  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  41465511 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacac 41465560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 29242339 - 29242275
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    ||||||||||||||||||||||| ||||  |||||||||||||| || || ||||||||||||||    
T  29242339 aaaattctatggtgaagtcatgaaaatggtttttttggtgaagttaaaactataacataaaaaat 29242275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 36641985 - 36642029
Alignment:
Q  15 agaaaaattctatggtgaagtcatgagaatgacttttttggtgaa 59  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  36641985 agaaaaattctatggtgaagtcatgagaatgacttttctggtgaa 36642029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 41464056 - 41464008
Alignment:
Q  13 ttagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||    
T  41464056 ttagaaaaattctatggtgaagtcgtgagaatgacatttttggtgaagt 41464008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 43446513 - 43446465
Alignment:
Q  13 ttagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  43446513 ttaggaaaattctatggtgaagtcatgagaatgactttttcggtgaagt 43446465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 43771041 - 43770978
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| ||||| ||||||| ||||    
T  43771041 gaaaaattctatggtgaagtcattagaatga-ttttttggtgaagttaacactataacatcaaaa 43770978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 31861897 - 31861940
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  31861897 aaaattctatggtgaagttatgagaatgacttttttggtgaagt 31861940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 19424829 - 19424767
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||| ||||||||||||||||||||| ||||| ||||||||| ||||| ||||||| ||||    
T  19424829 aaaattttatggtgaagtcatgagaatggcttttctggtgaagttaacactataacatcaaaa 19424767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 7007096 - 7007051
Alignment:
Q  13 ttagaaaaattctatggtgaagtcatgagaatgacttttttggtga 58  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||    
T  7007096 ttaggaaaattctatggtgaagtcatgagaatgatttttttggtga 7007051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 35958911 - 35958976
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||| ||||||||| | ||||||||||||||||||||   ||| |||||||||||||||    
T  35958911 aaaattctatgatgaagtcataaaaatgacttttttggtgaagttgccactataacataaaaaatg 35958976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 37905711 - 37905775
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    |||||||||||||||||| || | ||||| |||||||||||||| ||||| |||||||||||||||    
T  37905711 aaaattctatggtgaagttataaaaatga-ttttttggtgaagttaacactataacataaaaaatg 37905775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 13711466 - 13711514
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaaca 66  Q
    ||||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  13711466 aaaattctatggtgaagtcatcagaatgacttttctggtgaagttaaca 13711514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 19313854 - 19313902
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaaca 66  Q
    ||||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  19313854 aaaattctatggtgaagtcattagaatgacttttctggtgaagttaaca 19313902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 34441967 - 34441924
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||    
T  34441967 aaaattctatggtgaagtcatgaaaatgacttttttggtaaagt 34441924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 42005391 - 42005434
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||    
T  42005391 aaaattctatggtgaagtcatgaaaatgatttttttggtgaagt 42005434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 18494469 - 18494407
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||| |||||||||||||| |||||||||| ||||||||| ||||| ||| ||| ||||    
T  18494469 aaaattctgtggtgaagtcatgaaaatgacttttctggtgaagttaacactatagcatcaaaa 18494407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 26357579 - 26357641
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||| |||||||||||||||| |||||||||| || |||||| ||||| ||||||| ||||    
T  26357579 aaaattttatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaa 26357641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 31570935 - 31570873
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||| |||||||| |||||| ||||||| | ||||| ||||||| ||||    
T  31570935 aaaattctatggtgaagttatgagaataacttttctggtgaaattaacactataacattaaaa 31570873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 33902070 - 33902133
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||| ||||||| | |||||||||||| ||||||||| |||||  ||||||||||||||    
T  33902070 aaaattctatgatgaagtcgttagaatgacttttctggtgaagttaacac--taacataaaaaatg 33902133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 41960885 - 41960947
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||||||   ||||||||||||| |||||| ||||| ||||||| ||||    
T  41960885 aaaattctatggtgaagtcatagaaatgacttttttgatgaagttaacactataacatcaaaa 41960947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 4166924 - 4166972
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaaca 66  Q
    |||||||||||||||||||| || |||||||||| ||||||||| ||||    
T  4166924 aaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaaca 4166972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 33660571 - 33660507
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||||| | |||||||||| | || |||| ||||| ||||||| ||||    
T  33660571 gaaaaattctatggtgaagtcattaaaatgacttttctagttaagttaacactataacatcaaaa 33660507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 6177777 - 6177820
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||| || ||||||||||||||||||||| |||||||||    
T  6177777 aaaattctacggcgaagtcatgagaatgacttttctggtgaagt 6177820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 18514817 - 18514774
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||| ||| |||||||||||||||||||||||||| ||||||    
T  18514817 aaaattttatagtgaagtcatgagaatgacttttttgatgaagt 18514774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 19093415 - 19093458
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||||| |||||||||||||||||||||| |||| |||||||||    
T  19093415 aaaattttatggtgaagtcatgagaatgatttttctggtgaagt 19093458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 58025 - 58067
Alignment:
Q  19 aaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||| | |||||||||||||||||| ||||||    
T  58025 aaattctatggtgaaattatgagaatgacttttttgatgaagt 58067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 4264278 - 4264216
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||| | |||||||||| |||| |||| ||||| ||| ||| ||||    
T  4264278 aaaattctatggtgaagtcatcataatgacttttctggtaaagttaacactatagcatcaaaa 4264216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 2325571 - 2325514
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacat 75  Q
    |||||||||||||||||| ||| ||||||||||| | ||||||| ||||  |||||||    
T  2325571 aaaattctatggtgaagttatgtgaatgacttttctcgtgaagttaacaatataacat 2325514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 18947642 - 18947601
Alignment:
Q  20 aattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||||||||||||| ||| |||||| |||||||||    
T  18947642 aattctatggtgaagtcatgaaaataacttttctggtgaagt 18947601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 30844844 - 30844889
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||| |||||||||||||| |||||||||||||||  ||||||||    
T  30844844 gaaaagttctatggtgaagttatgagaatgacttttaaggtgaagt 30844889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 39167564 - 39167511
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaata 71  Q
    |||||| ||||||||||||| |||||||| ||||||| |||||| |||| ||||    
T  39167564 aaaattttatggtgaagtcacgagaatgatttttttgatgaagttaacagaata 39167511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 39788637 - 39788580
Alignment:
Q  4 ataacaaaattagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    |||| |||| ||| |||||| |||||||||||||| |||||||||||| | |||||||    
T  39788637 ataaaaaaagtaggaaaattttatggtgaagtcataagaatgacttttctagtgaagt 39788580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 3176938 - 3177006
Alignment:
Q  15 agaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||| | || |||||||||| || |||||| || || |||| || |||||||    
T  3176938 agaaaaattctatggtgaagttacgaaaatgacttttctgatgaagttaatactataatatcaaaaatg 3177006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 4763630 - 4763678
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaaca 66  Q
    ||||||||||| ||||||||||| |||||||||| || |||||| ||||    
T  4763630 aaaattctatgatgaagtcatgaaaatgacttttctgatgaagttaaca 4763678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 19073359 - 19073403
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatga-cttttttggtgaagt 61  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||    
T  19073359 aaaattctatggtgaagttatgagaatgattttttttggtgaagt 19073403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 19289519 - 19289460
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaat 82  Q
    ||||||||||||||||||||     |||||||||||| |||||| ||||| ||||||| ||||||    
T  19289519 aaaattctatggtgaagtca-----atgacttttttgatgaagttaacactataacatcaaaaat 19289460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 100823 - 100886
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaa 81  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||| | ||||||| |||||    
T  100823 aaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacgctataacatcaaaaa 100886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 42345 - 42412
Alignment:
Q  13 ttagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||| |||||| |||||||||||||||||||| | |||| ||||||||| ||||| ||||||| ||||    
T  42345 ttaggaaaattttatggtgaagtcatgagaataatttttctggtgaagttaacactataacatcaaaa 42412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 7886 - 7951
Alignment:
Q  15 agaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    ||||||||||||||||||||| || ||||||||||||||| |||||| ||||| ||||||| ||||    
T  7886 agaaaaattctatggtgaagttataagaatgacttttttgatgaagttaacactataacatcaaaa 7951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 146201 - 146134
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||| ||||||||||| ||||||| ||||||||| |||| ||||  |||||||||||||||    
T  146201 gaaaaattctacggtgaagtcataagaatgatttttttggttaagttaacattataacataaaaaatg 146134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 11906 - 11971
Alignment:
Q  16 gaaaaattctatggtgaagtcatgag-aatgacttttttggtgaagtaaacacaataacataaaaa 80  Q
    |||||||||||||||||||||||||| |||||||||| ||||||| | ||||| ||||||| ||||    
T  11906 gaaaaattctatggtgaagtcatgagaaatgacttttctggtgaaattaacaccataacattaaaa 11971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 43957 - 44024
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||| | |||| ||||||||||||||||| ||| | |||| || |||||||    
T  43957 gaaaaattctatggtgaagtcgtaagaaagacttttttggtgaagttaacgctataatatcaaaaatg 44024  T

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Target: scaffold0017 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 154830 - 154763
Alignment:
Q  16 gaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacacaataacataaaaaatg 83  Q
    ||||||||||||||||||||| | |||| ||||||||||||||||| ||| | |||| || |||||||    
T  154830 gaaaaattctatggtgaagtcgtaagaaagacttttttggtgaagttaacgctataatatcaaaaatg 154763  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 131 - 185
Alignment:
Q  13 ttagaaaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacac 67  Q
    |||| |||||||||||||||||||| || |||||||||| ||||||||| |||||    
T  131 ttaggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacac 185  T

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Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 408752 - 408703
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagtaaacac 67  Q
    ||||||||||||||||||||| | ||||| |||||||||||||| |||||    
T  408752 aaaattctatggtgaagtcataaaaatgatttttttggtgaagttaacac 408703  T

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Target: scaffold0312 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 9181 - 9138
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||| |||||| |||||||||||||||||| ||||||    
T  9181 aaaattctatgatgaagttatgagaatgacttttttgctgaagt 9138  T

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Target: scaffold0262 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 12184 - 12141
Alignment:
Q  18 aaaattctatggtgaagtcatgagaatgacttttttggtgaagt 61  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||    
T  12184 aaaattctatgatgaagttatgagaatgacttttctggtgaagt 12141  T

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