View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9401_high_59 (Length: 201)

Name: NF9401_high_59
Description: NF9401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9401_high_59
NF9401_high_59
[»] chr5 (24 HSPs)
chr5 (1-184)||(27270410-27270606)
chr5 (139-184)||(27270124-27270169)
chr5 (139-184)||(27270269-27270314)
chr5 (1-45)||(25175263-25175307)
chr5 (1-44)||(15735704-15735747)
chr5 (1-44)||(20595833-20595876)
chr5 (1-44)||(20602119-20602162)
chr5 (1-44)||(20608410-20608453)
chr5 (1-44)||(22317515-22317558)
chr5 (1-44)||(25006810-25006853)
chr5 (1-44)||(25116173-25116216)
chr5 (1-44)||(30759657-30759700)
chr5 (3-44)||(22855734-22855775)
chr5 (1-44)||(18073070-18073113)
chr5 (1-44)||(18484214-18484257)
chr5 (1-44)||(20790716-20790759)
chr5 (1-36)||(21387568-21387603)
chr5 (1-44)||(23600638-23600681)
chr5 (1-44)||(23748221-23748264)
chr5 (1-44)||(24219916-24219959)
chr5 (1-44)||(24940704-24940747)
chr5 (1-44)||(24953176-24953219)
chr5 (1-36)||(26847822-26847857)
chr5 (3-44)||(20444843-20444884)
[»] chr2 (21 HSPs)
chr2 (1-180)||(19805619-19805816)
chr2 (1-44)||(5500267-5500310)
chr2 (1-44)||(22665232-22665275)
chr2 (1-44)||(23159387-23159430)
chr2 (1-44)||(23570644-23570687)
chr2 (1-44)||(23644115-23644158)
chr2 (1-44)||(24171516-24171559)
chr2 (1-44)||(25144759-25144802)
chr2 (1-44)||(25804269-25804312)
chr2 (1-44)||(27631666-27631709)
chr2 (1-44)||(27768818-27768861)
chr2 (4-44)||(25370890-25370930)
chr2 (1-44)||(16775821-16775864)
chr2 (1-44)||(17590577-17590620)
chr2 (1-44)||(22044662-22044705)
chr2 (1-44)||(24795287-24795330)
chr2 (1-44)||(25357681-25357724)
chr2 (1-44)||(27627751-27627794)
chr2 (1-42)||(17334607-17334648)
chr2 (3-44)||(24321339-24321380)
chr2 (1-33)||(24178195-24178227)
[»] scaffold0096 (1 HSPs)
scaffold0096 (1-45)||(38510-38554)
[»] scaffold0974 (1 HSPs)
scaffold0974 (1-44)||(1273-1316)
[»] scaffold0861 (1 HSPs)
scaffold0861 (1-44)||(925-968)
[»] scaffold0773 (1 HSPs)
scaffold0773 (1-44)||(642-685)
[»] scaffold0582 (1 HSPs)
scaffold0582 (1-44)||(8824-8867)
[»] scaffold0566 (1 HSPs)
scaffold0566 (1-44)||(2773-2816)
[»] scaffold0512 (1 HSPs)
scaffold0512 (1-44)||(5250-5293)
[»] scaffold0375 (1 HSPs)
scaffold0375 (1-44)||(12749-12792)
[»] scaffold0230 (1 HSPs)
scaffold0230 (1-44)||(15848-15891)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-44)||(996-1039)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-44)||(42255-42298)
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-44)||(50508-50551)
scaffold0035 (1-42)||(88362-88403)
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-44)||(123539-123582)
scaffold0029 (1-42)||(77392-77433)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-44)||(121117-121160)
[»] scaffold0011 (3 HSPs)
scaffold0011 (1-44)||(162013-162056)
scaffold0011 (1-44)||(172272-172315)
scaffold0011 (1-44)||(164405-164448)
[»] chr8 (21 HSPs)
chr8 (1-44)||(11346955-11346998)
chr8 (1-44)||(19767695-19767738)
chr8 (1-44)||(20002285-20002328)
chr8 (1-44)||(20038983-20039026)
chr8 (1-44)||(21098796-21098839)
chr8 (1-44)||(21104117-21104160)
chr8 (1-44)||(21831187-21831230)
chr8 (1-44)||(21843526-21843569)
chr8 (1-44)||(22033557-22033600)
chr8 (1-44)||(22099657-22099700)
chr8 (1-44)||(22370113-22370156)
chr8 (8-44)||(23455108-23455144)
chr8 (1-44)||(8314638-8314681)
chr8 (1-44)||(16418622-16418665)
chr8 (1-44)||(17620916-17620959)
chr8 (1-44)||(21382264-21382307)
chr8 (1-44)||(21939998-21940041)
chr8 (1-44)||(22102563-22102606)
chr8 (1-44)||(22817761-22817804)
chr8 (1-44)||(23911610-23911653)
chr8 (1-44)||(24034185-24034228)
[»] chr7 (31 HSPs)
chr7 (1-44)||(538757-538800)
chr7 (1-44)||(825794-825837)
chr7 (1-44)||(4312727-4312770)
chr7 (1-44)||(8718035-8718078)
chr7 (1-44)||(9583063-9583106)
chr7 (1-44)||(11921309-11921352)
chr7 (1-44)||(13658036-13658079)
chr7 (1-44)||(14221720-14221763)
chr7 (1-44)||(14551269-14551312)
chr7 (1-44)||(15065939-15065982)
chr7 (1-44)||(15916778-15916821)
chr7 (1-44)||(16119851-16119894)
chr7 (1-44)||(16465618-16465661)
chr7 (1-44)||(18287772-18287815)
chr7 (1-44)||(27291507-27291550)
chr7 (3-44)||(23515237-23515278)
chr7 (1-44)||(4461244-4461287)
chr7 (1-44)||(5397286-5397329)
chr7 (1-36)||(8780938-8780973)
chr7 (1-44)||(9004122-9004165)
chr7 (1-36)||(9264941-9264976)
chr7 (1-44)||(12548807-12548850)
chr7 (1-44)||(12567184-12567227)
chr7 (1-44)||(13674026-13674069)
chr7 (1-36)||(15206586-15206621)
chr7 (1-44)||(16532266-16532309)
chr7 (1-44)||(16633353-16633396)
chr7 (1-44)||(18593354-18593397)
chr7 (1-44)||(18618287-18618330)
chr7 (1-44)||(48801778-48801821)
chr7 (1-41)||(4791384-4791424)
[»] chr6 (19 HSPs)
chr6 (1-44)||(2181224-2181267)
chr6 (1-44)||(15699725-15699768)
chr6 (1-44)||(18448304-18448347)
chr6 (1-44)||(22165551-22165594)
chr6 (1-44)||(22243982-22244025)
chr6 (1-44)||(23023257-23023300)
chr6 (1-44)||(25963412-25963455)
chr6 (1-44)||(25968059-25968102)
chr6 (1-44)||(30671809-30671852)
chr6 (3-44)||(20107784-20107825)
chr6 (1-45)||(29595858-29595902)
chr6 (1-44)||(18184876-18184919)
chr6 (1-44)||(20170413-20170456)
chr6 (1-44)||(21560556-21560599)
chr6 (1-44)||(22061505-22061548)
chr6 (1-44)||(22767118-22767161)
chr6 (1-44)||(24855247-24855290)
chr6 (1-36)||(25631271-25631306)
chr6 (1-44)||(35270983-35271026)
[»] chr4 (17 HSPs)
chr4 (1-44)||(10630920-10630963)
chr4 (1-44)||(11496616-11496659)
chr4 (1-44)||(13823083-13823126)
chr4 (1-44)||(14654000-14654043)
chr4 (1-44)||(15254518-15254561)
chr4 (1-44)||(15865658-15865701)
chr4 (1-44)||(17484912-17484955)
chr4 (1-44)||(18081461-18081504)
chr4 (1-44)||(38426893-38426936)
chr4 (1-44)||(42709733-42709776)
chr4 (1-44)||(56580541-56580584)
chr4 (1-44)||(3354810-3354853)
chr4 (1-44)||(10650558-10650601)
chr4 (1-44)||(15260111-15260154)
chr4 (1-44)||(15409540-15409583)
chr4 (1-44)||(16682924-16682967)
chr4 (1-34)||(18292118-18292151)
[»] chr3 (36 HSPs)
chr3 (1-44)||(3245590-3245633)
chr3 (1-44)||(3339228-3339271)
chr3 (1-44)||(4382916-4382959)
chr3 (1-44)||(10546938-10546981)
chr3 (1-44)||(10602474-10602517)
chr3 (1-44)||(12160209-12160252)
chr3 (1-44)||(12776536-12776579)
chr3 (1-44)||(13001427-13001470)
chr3 (1-44)||(13136212-13136255)
chr3 (1-44)||(13504883-13504926)
chr3 (1-44)||(14348590-14348633)
chr3 (1-44)||(15946779-15946822)
chr3 (1-44)||(20584273-20584316)
chr3 (1-44)||(27356730-27356773)
chr3 (1-44)||(3279354-3279397)
chr3 (1-44)||(7600525-7600568)
chr3 (1-44)||(9360973-9361016)
chr3 (1-44)||(10160175-10160218)
chr3 (1-44)||(11398379-11398422)
chr3 (1-44)||(11947577-11947620)
chr3 (1-44)||(12187078-12187121)
chr3 (1-44)||(13187419-13187462)
chr3 (1-44)||(13195460-13195503)
chr3 (1-44)||(13601232-13601275)
chr3 (1-44)||(14445770-14445813)
chr3 (1-36)||(15556944-15556979)
chr3 (1-44)||(15619285-15619328)
chr3 (1-44)||(15645171-15645214)
chr3 (1-44)||(16373567-16373610)
chr3 (1-44)||(16448762-16448805)
chr3 (1-44)||(17388000-17388043)
chr3 (1-44)||(20156517-20156559)
chr3 (1-44)||(37942548-37942591)
chr3 (7-44)||(17045865-17045902)
chr3 (7-44)||(17048025-17048062)
chr3 (1-45)||(8686389-8686433)
[»] chr1 (12 HSPs)
chr1 (1-44)||(17094603-17094646)
chr1 (1-44)||(19364199-19364242)
chr1 (1-44)||(20237626-20237669)
chr1 (1-44)||(27047044-27047087)
chr1 (1-44)||(52938623-52938666)
chr1 (3-44)||(8653286-8653327)
chr1 (3-44)||(19875648-19875689)
chr1 (1-44)||(14070675-14070718)
chr1 (1-44)||(21784474-21784517)
chr1 (1-44)||(21798664-21798707)
chr1 (2-44)||(16382578-16382620)
chr1 (1-42)||(18478235-18478276)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-43)||(22774-22816)
[»] scaffold0258 (1 HSPs)
scaffold0258 (3-44)||(22159-22200)
[»] scaffold0215 (1 HSPs)
scaffold0215 (1-45)||(617-661)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-45)||(18217-18261)
[»] scaffold0679 (1 HSPs)
scaffold0679 (1-44)||(8104-8147)
[»] scaffold0506 (1 HSPs)
scaffold0506 (1-44)||(2289-2332)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-44)||(10208-10251)
[»] scaffold0404 (1 HSPs)
scaffold0404 (1-44)||(3479-3522)
[»] scaffold0384 (1 HSPs)
scaffold0384 (1-44)||(10731-10774)
[»] scaffold0162 (1 HSPs)
scaffold0162 (1-44)||(35106-35149)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-44)||(37745-37788)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-44)||(383-426)
[»] scaffold0089 (1 HSPs)
scaffold0089 (1-44)||(54851-54894)
[»] scaffold0059 (1 HSPs)
scaffold0059 (1-36)||(12574-12609)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-36)||(58630-58665)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-44)||(97728-97771)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-44)||(11219-11262)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-36)||(232789-232824)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-43)||(251872-251914)


Alignment Details
Target: chr5 (Bit Score: 119; Significance: 5e-61; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 27270606 - 27270410
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaaaccaagggacgacaacaacataattcagaaaaacagaatgaactaaaaaccaatt- 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  27270606 tcaaactcccccacacttgaatcattgcttgtcctcaagcaaaaaccaagggacgacaacaacataattcagaaaaacagaatgaactaaaaaccaattg 27270507  T
Q  100 -----------------gctttgttctcaggatgcacttatcacaacctaaacacttttcaaggatcacatcaaccctacaacagtttcaagtgagtgtg 182  Q
                     ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||    
T  27270506 catttttatttttcaaggctttgttctcaggatgcacttatcacaacctaaacacttttca-----cacatcaaccctacaacagtttcaagtgagtgtg 27270412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 27270169 - 27270124
Alignment:
Q  139 tttcaaggatcacatcaaccctacaacagtttcaagtgagtgtgtg 184  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  27270169 tttcatggatcacatcaaccctacaacagtttcaagtgagtgtgtg 27270124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 27270314 - 27270269
Alignment:
Q  139 tttcaaggatcacatcaaccctacaacagtttcaagtgagtgtgtg 184  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  27270314 tttcatggatcacatcaaccctacaacagtttcaagtgagtgtgtg 27270269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25175263 - 25175307
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaaa 45  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||    
T  25175263 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaa 25175307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15735747 - 15735704
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  15735747 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 15735704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20595833 - 20595876
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  20595833 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 20595876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20602119 - 20602162
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  20602119 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 20602162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20608410 - 20608453
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  20608410 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 20608453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22317515 - 22317558
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  22317515 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22317558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25006810 - 25006853
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  25006810 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 25006853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25116173 - 25116216
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  25116173 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 25116216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30759657 - 30759700
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  30759657 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 30759700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 22855775 - 22855734
Alignment:
Q  3 aaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  22855775 aaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22855734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18073113 - 18073070
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  18073113 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 18073070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18484214 - 18484257
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||    
T  18484214 tcaaactccccaacacttgaatctttgcttgtcctcaagcaaaa 18484257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20790716 - 20790759
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  20790716 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 20790759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 21387603 - 21387568
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctc 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  21387603 tcaaactcccccacacttgaatctttgcttgtcctc 21387568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23600638 - 23600681
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||    
T  23600638 tcaaattcccccacacttgaatctttgcttgtcctcaagcaaaa 23600681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23748264 - 23748221
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  23748264 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 23748221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24219959 - 24219916
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    |||||||||||||||||||| || |||||||||||| |||||||    
T  24219959 tcaaactcccccacacttgagtctttgcttgtcctcaagcaaaa 24219916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24940747 - 24940704
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  24940747 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 24940704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24953176 - 24953219
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  24953176 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 24953219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 26847857 - 26847822
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctc 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  26847857 tcaaactcccccacacttgaatctttgcttgtcctc 26847822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 20444843 - 20444884
Alignment:
Q  3 aaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||| ||| |||||||| |||||||    
T  20444843 aaactcccccacacttgaatctttgattgtcctcaagcaaaa 20444884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 4e-49; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 19805619 - 19805816
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaaaccaagggacgacaacaacataattcagaaaaacagaatgaactaaaaaccaatt- 99  Q
    ||||||||||||||||| ||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||| |||||     
T  19805619 tcaaactcccccacactagaaccattgcttgtcctcaagcaaaaagcaagggatgacaacaacataattcagaaaaacagaatgaactagaaatcaattg 19805718  T
Q  100 -----------------gctttgttctcaggatgcacttatcacaacctaaacacttttcaaggatcacatcaaccctacaacagtttcaagtgagtg 180  Q
                     |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19805719 catttttatttttcaaggctttgctctcagggtgcacttatcacaacctaaacacttttcaaggatcacatcaaccctacaacaatttcaagtgagtg 19805816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5500267 - 5500310
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  5500267 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 5500310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22665275 - 22665232
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  22665275 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22665232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23159387 - 23159430
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  23159387 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 23159430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23570644 - 23570687
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  23570644 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 23570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23644158 - 23644115
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  23644158 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 23644115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24171559 - 24171516
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  24171559 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 24171516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25144759 - 25144802
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  25144759 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 25144802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25804269 - 25804312
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  25804269 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 25804312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27631709 - 27631666
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  27631709 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 27631666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27768818 - 27768861
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  27768818 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 27768861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 25370890 - 25370930
Alignment:
Q  4 aactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  25370890 aactcccccacacttgaatctttgcttgtcctcaagcaaaa 25370930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 16775864 - 16775821
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  16775864 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 16775821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17590620 - 17590577
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  17590620 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 17590577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22044662 - 22044705
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  22044662 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 22044705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24795287 - 24795330
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  24795287 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 24795330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25357724 - 25357681
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  25357724 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 25357681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27627794 - 27627751
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  27627794 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 27627751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17334607 - 17334648
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaa 42  Q
    ||||||||||||||||||||| ||||| |||||||| |||||    
T  17334607 tcaaactcccccacacttgaaccattgattgtcctcaagcaa 17334648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 24321380 - 24321339
Alignment:
Q  3 aaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||| ||||||||| |||||||||||| |||||||    
T  24321380 aaactcccccatacttgaatctttgcttgtcctcaagcaaaa 24321339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24178195 - 24178227
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtc 33  Q
    ||||||||||||||||||||||| |||||||||    
T  24178195 tcaaactcccccacacttgaatctttgcttgtc 24178227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38510 - 38554
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaaa 45  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||    
T  38510 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaaa 38554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1316 - 1273
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  1316 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 1273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 968 - 925
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  968 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0773 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 685 - 642
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  685 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8867 - 8824
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  8867 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 8824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2816 - 2773
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  2816 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 2773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5293 - 5250
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  5293 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 5250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12792 - 12749
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  12792 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 12749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15891 - 15848
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  15891 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 15848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1039 - 996
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  1039 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42298 - 42255
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  42298 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 42255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 50508 - 50551
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  50508 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 50551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 88362 - 88403
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaa 42  Q
    ||||||||||| ||||||||| |||||||||||||| |||||    
T  88362 tcaaactcccctacacttgaaccattgcttgtcctcaagcaa 88403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 123582 - 123539
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  123582 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 123539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 77392 - 77433
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaa 42  Q
    ||||||||||| ||||||||| |||||||||||||| |||||    
T  77392 tcaaactcccctacacttgaaccattgcttgtcctcaagcaa 77433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 121160 - 121117
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  121160 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 121117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 162056 - 162013
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  162056 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 162013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 172315 - 172272
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  172315 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 172272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 164405 - 164448
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||| ||||| |||||||    
T  164405 tcaaactcccccacacttgaatctttgcttatcctcaagcaaaa 164448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11346955 - 11346998
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  11346955 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 11346998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19767738 - 19767695
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  19767738 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 19767695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20002328 - 20002285
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  20002328 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 20002285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20038983 - 20039026
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  20038983 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 20039026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21098796 - 21098839
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  21098796 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 21098839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21104117 - 21104160
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  21104117 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 21104160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21831230 - 21831187
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  21831230 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 21831187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21843526 - 21843569
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  21843526 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 21843569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22033557 - 22033600
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  22033557 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22033600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22099657 - 22099700
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  22099657 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22099700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22370156 - 22370113
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  22370156 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22370113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 23455144 - 23455108
Alignment:
Q  8 cccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    |||||||||||||||| ||||||||||||||||||||    
T  23455144 cccccacacttgaatctttgcttgtcctcgagcaaaa 23455108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8314681 - 8314638
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  8314681 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 8314638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16418622 - 16418665
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  16418622 tcaaactcccccacacttgaatctttgcttgttctcaagcaaaa 16418665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17620959 - 17620916
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||  |||||||||||| |||||||    
T  17620959 tcaaactcccccacacttgaatttttgcttgtcctcaagcaaaa 17620916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21382307 - 21382264
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  21382307 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 21382264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21939998 - 21940041
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  21939998 tcaaactcccccacacttgaatctttgcttgttctcaagcaaaa 21940041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22102606 - 22102563
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||    
T  22102606 tcaaactcccctacacttgaatctttgcttgtcctcaagcaaaa 22102563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22817804 - 22817761
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||| ||||| |||||||    
T  22817804 tcaaactcccccacacttgaatctttgcttttcctcaagcaaaa 22817761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23911653 - 23911610
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  23911653 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 23911610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24034228 - 24034185
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||| | |||||||    
T  24034228 tcaaactcccccacacttgaatctttgcttgtccacaagcaaaa 24034185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 538757 - 538800
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  538757 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 538800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 825837 - 825794
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  825837 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 825794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4312770 - 4312727
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  4312770 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 4312727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8718078 - 8718035
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  8718078 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 8718035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9583106 - 9583063
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  9583106 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 9583063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11921309 - 11921352
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  11921309 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 11921352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13658079 - 13658036
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  13658079 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 13658036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14221720 - 14221763
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  14221720 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 14221763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14551312 - 14551269
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  14551312 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 14551269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15065982 - 15065939
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  15065982 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 15065939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15916778 - 15916821
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  15916778 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 15916821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16119851 - 16119894
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  16119851 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 16119894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16465618 - 16465661
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  16465618 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 16465661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18287815 - 18287772
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  18287815 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 18287772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27291550 - 27291507
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  27291550 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 27291507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 23515278 - 23515237
Alignment:
Q  3 aaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  23515278 aaactcccccacacttgaatctttgcttgtcctcaagcaaaa 23515237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4461244 - 4461287
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  4461244 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 4461287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5397329 - 5397286
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||    
T  5397329 tcaaactcccctacacttgaatctttgcttgtcctcaagcaaaa 5397286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 8780938 - 8780973
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctc 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  8780938 tcaaactcccccacacttgaatctttgcttgtcctc 8780973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9004165 - 9004122
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||    
T  9004165 tcaaactcccccacacttgaatctttgtttgtcctcaagcaaaa 9004122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 9264941 - 9264976
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctc 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9264941 tcaaactcccccacacttgaatctttgcttgtcctc 9264976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12548807 - 12548850
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||    
T  12548807 tcaaactccccaacacttgaatctttgcttgtcctcaagcaaaa 12548850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12567227 - 12567184
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||  |||||||||||| |||||||    
T  12567227 tcaaactcccccacacttgaatttttgcttgtcctcaagcaaaa 12567184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13674069 - 13674026
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  13674069 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 13674026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 15206586 - 15206621
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctc 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  15206586 tcaaactcccccacacttgaatctttgcttgtcctc 15206621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 16532309 - 16532266
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  16532309 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 16532266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16633353 - 16633396
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  16633353 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 16633396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18593354 - 18593397
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  18593354 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 18593397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18618330 - 18618287
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  18618330 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 18618287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 48801778 - 48801821
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| || ||||||||| |||||||    
T  48801778 tcaaactcccccacacttgaatcttttcttgtcctcaagcaaaa 48801821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4791384 - 4791424
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagca 41  Q
    ||||||||||||| ||||||||| |||||||||||| ||||    
T  4791384 tcaaactcccccatacttgaatctttgcttgtcctcaagca 4791424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2181267 - 2181224
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  2181267 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 2181224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15699768 - 15699725
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  15699768 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 15699725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18448347 - 18448304
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  18448347 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 18448304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22165551 - 22165594
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  22165551 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22165594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22244025 - 22243982
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  22244025 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22243982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23023300 - 23023257
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  23023300 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 23023257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25963455 - 25963412
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  25963455 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 25963412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25968102 - 25968059
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  25968102 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 25968059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30671809 - 30671852
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  30671809 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 30671852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 20107784 - 20107825
Alignment:
Q  3 aaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  20107784 aaactcccccacacttgaatctttgcttgtcctcaagcaaaa 20107825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29595902 - 29595858
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaaa 45  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||    
T  29595902 tcaaactccctcacacttgaatctttgcttgtcctcaagcaaaaa 29595858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18184876 - 18184919
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  18184876 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 18184919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20170456 - 20170413
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  20170456 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 20170413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21560556 - 21560599
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  21560556 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 21560599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22061505 - 22061548
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  22061505 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 22061548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22767118 - 22767161
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  22767118 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 22767161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24855247 - 24855290
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  24855247 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 24855290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 25631271 - 25631306
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctc 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  25631271 tcaaactcccccacacttgaatctttgcttgtcctc 25631306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35271026 - 35270983
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    |||||| |||||||||||||||| |||||||||||| |||||||    
T  35271026 tcaaacacccccacacttgaatctttgcttgtcctcaagcaaaa 35270983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10630963 - 10630920
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  10630963 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 10630920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11496616 - 11496659
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  11496616 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 11496659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13823126 - 13823083
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  13823126 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 13823083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14654000 - 14654043
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  14654000 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 14654043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15254561 - 15254518
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  15254561 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 15254518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15865701 - 15865658
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  15865701 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 15865658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17484912 - 17484955
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  17484912 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 17484955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18081461 - 18081504
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  18081461 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 18081504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38426936 - 38426893
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  38426936 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 38426893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42709733 - 42709776
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  42709733 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 42709776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 56580541 - 56580584
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  56580541 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 56580584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3354853 - 3354810
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||  |||||||||||| |||||||    
T  3354853 tcaaactcccccacacttgaatagttgcttgtcctcaagcaaaa 3354810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10650601 - 10650558
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  10650601 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 10650558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15260111 - 15260154
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||| ||||| |||||||    
T  15260111 tcaaactcccccacacttgaatctttgcttttcctcaagcaaaa 15260154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15409583 - 15409540
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||    
T  15409583 tcaaactcccccacactagaatctttgcttgtcctcaagcaaaa 15409540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 16682967 - 16682924
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| ||||||||| || |||||||    
T  16682967 tcaaactcccccacacttgaatctttgcttgtcatcaagcaaaa 16682924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 18292151 - 18292118
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcc 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  18292151 tcaaactcccccacacttgaatctttgcttgtcc 18292118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3245590 - 3245633
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  3245590 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 3245633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3339228 - 3339271
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  3339228 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 3339271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4382959 - 4382916
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  4382959 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 4382916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10546938 - 10546981
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  10546938 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 10546981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10602474 - 10602517
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  10602474 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 10602517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12160209 - 12160252
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  12160209 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 12160252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12776536 - 12776579
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  12776536 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 12776579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13001427 - 13001470
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  13001427 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 13001470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13136212 - 13136255
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  13136212 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 13136255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13504883 - 13504926
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  13504883 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 13504926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14348590 - 14348633
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  14348590 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 14348633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15946822 - 15946779
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  15946822 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 15946779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20584316 - 20584273
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  20584316 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 20584273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27356730 - 27356773
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  27356730 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 27356773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3279397 - 3279354
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||    
T  3279397 tcaaactcccccacacttgaatctttgtttgtcctcaagcaaaa 3279354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7600568 - 7600525
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  7600568 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 7600525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9360973 - 9361016
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  9360973 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 9361016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10160175 - 10160218
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  10160175 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 10160218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11398422 - 11398379
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||  |||||||||||| |||||||    
T  11398422 tcaaactcccccacacttgaatatttgcttgtcctcaagcaaaa 11398379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11947620 - 11947577
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| || ||||||||| |||||||    
T  11947620 tcaaactcccccacacttgaatctttacttgtcctcaagcaaaa 11947577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12187078 - 12187121
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  12187078 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 12187121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13187419 - 13187462
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  13187419 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 13187462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13195460 - 13195503
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    |||||||||| |||||||||||| |||||||||||| |||||||    
T  13195460 tcaaactcccacacacttgaatctttgcttgtcctcaagcaaaa 13195503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13601275 - 13601232
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  13601275 tcaaactcccccacacttgaatctttgcttgttctcaagcaaaa 13601232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14445770 - 14445813
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||  |||||||    
T  14445770 tcaaactcccccacacttgaatctttgcttgtcctaaagcaaaa 14445813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 15556944 - 15556979
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctc 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  15556944 tcaaactcccccacacttgaatctttgcttgtcctc 15556979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15619285 - 15619328
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||| ||||||||||||||| |||||||||||| |||||||    
T  15619285 tcaaactgccccacacttgaatctttgcttgtcctcaagcaaaa 15619328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15645214 - 15645171
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  15645214 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 15645171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16373567 - 16373610
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  16373567 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 16373610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16448762 - 16448805
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  16448762 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 16448805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17388043 - 17388000
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||  |||||||    
T  17388043 tcaaactcccccacacttgaatctttgcttgtccttaagcaaaa 17388000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20156517 - 20156559
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  20156517 tcaaactcccccacacttgaatc-ttgcttgtcctcaagcaaaa 20156559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37942591 - 37942548
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  37942591 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 37942548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 17045902 - 17045865
Alignment:
Q  7 tcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  17045902 tcccccacacttgaatctttgcttgtcctcaagcaaaa 17045865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 17048062 - 17048025
Alignment:
Q  7 tcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  17048062 tcccccacacttgaatctttgcttgtcctcaagcaaaa 17048025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8686389 - 8686433
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaaa 45  Q
    ||||||||||||| ||||||||| |||||||||||| | ||||||    
T  8686389 tcaaactcccccatacttgaatctttgcttgtcctcaaacaaaaa 8686433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17094603 - 17094646
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  17094603 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 17094646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19364242 - 19364199
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  19364242 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 19364199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20237669 - 20237626
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  20237669 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 20237626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27047087 - 27047044
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  27047087 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 27047044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 52938623 - 52938666
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  52938623 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaaa 52938666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 8653327 - 8653286
Alignment:
Q  3 aaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  8653327 aaactcccccacacttgaatctttgcttgtcctcaagcaaaa 8653286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 19875648 - 19875689
Alignment:
Q  3 aaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  19875648 aaactcccccacacttgaatctttgcttgtcctcaagcaaaa 19875689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14070718 - 14070675
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  14070718 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 14070675  T

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Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21784474 - 21784517
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||  |||||||||||| |||||||    
T  21784474 tcaaactcccccacacttgaatatttgcttgtcctcaagcaaaa 21784517  T

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Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21798664 - 21798707
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  21798664 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 21798707  T

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Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 16382578 - 16382620
Alignment:
Q  2 caaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    |||||||||||| ||||||||| |||||||||||| |||||||    
T  16382578 caaactcccccatacttgaatctttgcttgtcctcaagcaaaa 16382620  T

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Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18478235 - 18478276
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaa 42  Q
    ||||||||||| ||||||||| |||||||||||||| |||||    
T  18478235 tcaaactcccctacacttgaaccattgcttgtcctcaagcaa 18478276  T

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Target: scaffold0031 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22816 - 22774
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaa 43  Q
    ||||||||||||||||||||||| |||||||||||| ||||||    
T  22816 tcaaactcccccacacttgaatctttgcttgtcctcaagcaaa 22774  T

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Target: scaffold0258 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 22159 - 22200
Alignment:
Q  3 aaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  22159 aaactcccccacacttgaatctttgcttgtcctcaagcaaaa 22200  T

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Target: scaffold0215 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 617 - 661
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaaa 45  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||    
T  617 tcaaactcccccacacttgaatctttgcttgtcctaaagcaaaaa 661  T

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Target: scaffold0123 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18261 - 18217
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaaa 45  Q
    ||||||||||||||||||||||| |||||||||||| || |||||    
T  18261 tcaaactcccccacacttgaatctttgcttgtcctcaagaaaaaa 18217  T

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Target: scaffold0679 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8147 - 8104
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| ||||||||| || |||||||    
T  8147 tcaaactcccccacacttgaatctttgcttgtcttcaagcaaaa 8104  T

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Target: scaffold0506 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2289 - 2332
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  2289 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 2332  T

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Target: scaffold0420 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10208 - 10251
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  10208 tcaaactcccccaaacttgaatctttgcttgtcctcaagcaaaa 10251  T

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Target: scaffold0404 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3522 - 3479
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  3522 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 3479  T

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Target: scaffold0384 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10774 - 10731
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    |||||||||||||||||| |||| |||||||||||| |||||||    
T  10774 tcaaactcccccacactttaatctttgcttgtcctcaagcaaaa 10731  T

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Target: scaffold0162 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35106 - 35149
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| || ||||||||| |||||||    
T  35106 tcaaactcccccacacttgaatctttccttgtcctcaagcaaaa 35149  T

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Target: scaffold0116 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37745 - 37788
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||    
T  37745 tcaaattcccccacacttgaatctttgcttgtcctcaagcaaaa 37788  T

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Target: scaffold0113 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 426 - 383
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  426 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 383  T

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Target: scaffold0089 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 54851 - 54894
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    |||||||||||||| |||||||| |||||||||||| |||||||    
T  54851 tcaaactcccccacgcttgaatctttgcttgtcctcaagcaaaa 54894  T

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Target: scaffold0059 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 12609 - 12574
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctc 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  12609 tcaaactcccccacacttgaatctttgcttgtcctc 12574  T

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Target: scaffold0034 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 58630 - 58665
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctc 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  58630 tcaaactcccccacacttgaatctttgcttgtcctc 58665  T

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Target: scaffold0032 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 97728 - 97771
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||||||||||||| |||||||||||  |||||||    
T  97728 tcaaactcccccacacttgaatctttgcttgtcctaaagcaaaa 97771  T

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Target: scaffold0026 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11262 - 11219
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaaa 44  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||    
T  11262 tcaaactcccccatacttgaatctttgcttgtcctcaagcaaaa 11219  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 232789 - 232824
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctc 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  232789 tcaaactcccccacacttgaatctttgcttgtcctc 232824  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 251872 - 251914
Alignment:
Q  1 tcaaactcccccacacttgaatcattgcttgtcctcgagcaaa 43  Q
    ||||||||||||||||||||||| || ||||||||| ||||||    
T  251872 tcaaactcccccacacttgaatctttacttgtcctcaagcaaa 251914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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