View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9401_low_138 (Length: 206)

Name: NF9401_low_138
Description: NF9401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9401_low_138
NF9401_low_138
[»] chr3 (49 HSPs)
chr3 (1-201)||(12776539-12776739)
chr3 (1-201)||(3339231-3339431)
chr3 (1-201)||(15946619-15946819)
chr3 (1-201)||(15619288-15619489)
chr3 (1-176)||(13136215-13136391)
chr3 (1-201)||(13195463-13195665)
chr3 (1-200)||(14445773-14445969)
chr3 (49-201)||(20565633-20565786)
chr3 (1-201)||(13068149-13068352)
chr3 (4-202)||(17045703-17045902)
chr3 (4-202)||(17047863-17048062)
chr3 (86-201)||(20561017-20561132)
chr3 (86-201)||(20563325-20563440)
chr3 (1-201)||(20225759-20225960)
chr3 (1-202)||(13601068-13601272)
chr3 (1-54)||(14348593-14348646)
chr3 (1-53)||(20584261-20584313)
chr3 (1-200)||(3245593-3245795)
chr3 (1-52)||(3279343-3279394)
chr3 (1-54)||(4382903-4382956)
chr3 (1-54)||(10546941-10546994)
chr3 (1-54)||(13001430-13001483)
chr3 (125-201)||(8686518-8686594)
chr3 (1-52)||(10602477-10602528)
chr3 (1-52)||(13504886-13504937)
chr3 (1-52)||(27356733-27356784)
chr3 (6-200)||(2721305-2721502)
chr3 (1-54)||(9360976-9361029)
chr3 (1-54)||(12160212-12160265)
chr3 (1-54)||(13690758-13690811)
chr3 (1-54)||(16448765-16448818)
chr3 (1-201)||(13097711-13097914)
chr3 (1-201)||(20156520-20156722)
chr3 (1-52)||(7600514-7600565)
chr3 (1-52)||(10160178-10160229)
chr3 (1-52)||(11947566-11947617)
chr3 (1-52)||(12187081-12187132)
chr3 (1-52)||(13187422-13187473)
chr3 (1-52)||(15556947-15556998)
chr3 (1-52)||(15645160-15645211)
chr3 (1-52)||(16373570-16373621)
chr3 (1-52)||(37942537-37942588)
chr3 (1-47)||(11398373-11398419)
chr3 (1-46)||(17387995-17388040)
chr3 (1-52)||(6815027-6815078)
chr3 (1-52)||(10147170-10147221)
chr3 (1-52)||(12193495-12193546)
chr3 (162-201)||(16703156-16703195)
chr3 (162-201)||(11398215-11398255)
[»] chr8 (26 HSPs)
chr8 (1-201)||(22369953-22370153)
chr8 (1-201)||(22033560-22033760)
chr8 (1-201)||(11346958-11347158)
chr8 (1-201)||(21831027-21831227)
chr8 (1-201)||(22102403-22102603)
chr8 (1-201)||(19767538-19767735)
chr8 (1-201)||(22099660-22099860)
chr8 (7-200)||(14352181-14352378)
chr8 (1-54)||(20038986-20039039)
chr8 (1-54)||(21098799-21098852)
chr8 (1-54)||(21104120-21104173)
chr8 (1-54)||(21843529-21843582)
chr8 (1-105)||(24034120-24034225)
chr8 (1-48)||(20002278-20002325)
chr8 (1-54)||(16418625-16418678)
chr8 (1-54)||(17620903-17620956)
chr8 (1-54)||(21940001-21940054)
chr8 (1-52)||(8314627-8314678)
chr8 (1-52)||(21382253-21382304)
chr8 (1-52)||(23911599-23911650)
chr8 (1-51)||(22817751-22817801)
chr8 (1-54)||(20712591-20712644)
chr8 (1-52)||(8322851-8322902)
chr8 (152-201)||(21843682-21843733)
chr8 (5-52)||(23455097-23455144)
chr8 (4-54)||(21538707-21538757)
[»] chr2 (32 HSPs)
chr2 (1-201)||(23159390-23159590)
chr2 (1-201)||(23570647-23570847)
chr2 (1-201)||(27631506-27631706)
chr2 (1-201)||(27768821-27769021)
chr2 (1-201)||(24171355-24171556)
chr2 (15-201)||(23647980-23648165)
chr2 (1-201)||(25144762-25144966)
chr2 (1-54)||(5500270-5500323)
chr2 (1-105)||(24178198-24178302)
chr2 (125-201)||(24321177-24321253)
chr2 (1-81)||(25804272-25804352)
chr2 (1-52)||(22665221-22665272)
chr2 (1-54)||(23644102-23644155)
chr2 (145-201)||(26191785-26191841)
chr2 (158-201)||(15532753-15532796)
chr2 (1-52)||(16775810-16775861)
chr2 (1-52)||(17590566-17590617)
chr2 (1-52)||(22044665-22044716)
chr2 (1-52)||(23798927-23798978)
chr2 (158-201)||(24019224-24019267)
chr2 (1-52)||(25357670-25357721)
chr2 (1-40)||(25370890-25370929)
chr2 (1-52)||(27627740-27627791)
chr2 (1-47)||(24795290-24795336)
chr2 (158-201)||(20851597-20851640)
chr2 (1-40)||(24321340-24321379)
chr2 (1-40)||(24506821-24506860)
chr2 (158-201)||(25582934-25582977)
chr2 (1-47)||(11620-11666)
chr2 (1-47)||(117707-117753)
chr2 (6-52)||(23257579-23257625)
chr2 (162-201)||(24502168-24502208)
[»] chr7 (37 HSPs)
chr7 (1-201)||(15065779-15065979)
chr7 (1-201)||(14221723-14221924)
chr7 (1-201)||(825634-825834)
chr7 (1-201)||(18287612-18287812)
chr7 (1-201)||(15916781-15916981)
chr7 (1-201)||(27291346-27291547)
chr7 (1-201)||(5397126-5397326)
chr7 (1-201)||(15206589-15206790)
chr7 (1-200)||(4791387-4791587)
chr7 (1-201)||(4461247-4461451)
chr7 (1-201)||(4312564-4312767)
chr7 (1-198)||(9264944-9265145)
chr7 (1-54)||(538760-538813)
chr7 (1-201)||(8780941-8781146)
chr7 (1-192)||(9194549-9194741)
chr7 (1-54)||(23515224-23515277)
chr7 (1-52)||(9004111-9004162)
chr7 (1-52)||(9583052-9583103)
chr7 (1-52)||(14551258-14551309)
chr7 (1-54)||(11921312-11921365)
chr7 (1-54)||(12548810-12548863)
chr7 (1-46)||(13658031-13658076)
chr7 (1-40)||(8718036-8718075)
chr7 (1-40)||(16119854-16119893)
chr7 (1-40)||(16465621-16465660)
chr7 (1-52)||(18593357-18593408)
chr7 (1-52)||(18618276-18618327)
chr7 (1-52)||(48801781-48801832)
chr7 (1-47)||(13674020-13674066)
chr7 (1-54)||(12567171-12567224)
chr7 (1-54)||(16532253-16532306)
chr7 (1-54)||(16633356-16633409)
chr7 (1-52)||(6713073-6713124)
chr7 (152-201)||(12567020-12567071)
chr7 (1-40)||(20108540-20108579)
chr7 (162-201)||(538924-538964)
chr7 (162-201)||(20108375-20108415)
[»] chr5 (25 HSPs)
chr5 (1-201)||(30759660-30759860)
chr5 (1-200)||(25006813-25007012)
chr5 (1-201)||(22855572-22855774)
chr5 (1-201)||(22317518-22317719)
chr5 (1-200)||(18484217-18484416)
chr5 (1-183)||(25116176-25116360)
chr5 (1-201)||(26847652-26847854)
chr5 (1-183)||(25175266-25175451)
chr5 (1-52)||(15735693-15735744)
chr5 (1-52)||(20595836-20595887)
chr5 (1-52)||(20602122-20602173)
chr5 (1-52)||(20608413-20608464)
chr5 (1-201)||(24219752-24219956)
chr5 (1-47)||(20444844-20444890)
chr5 (4-54)||(23600644-23600694)
chr5 (1-52)||(18073059-18073110)
chr5 (1-52)||(20790719-20790770)
chr5 (1-52)||(20916461-20916512)
chr5 (1-52)||(23748210-23748261)
chr5 (1-52)||(24940693-24940744)
chr5 (125-201)||(23600767-23600845)
chr5 (1-36)||(21387565-21387600)
chr5 (1-40)||(24953179-24953218)
chr5 (1-40)||(27270564-27270603)
chr5 (125-201)||(20444970-20445048)
[»] chr4 (25 HSPs)
chr4 (1-199)||(15260114-15260312)
chr4 (1-201)||(10650398-10650598)
chr4 (1-201)||(14654003-14654203)
chr4 (1-201)||(16682762-16682964)
chr4 (1-201)||(15409380-15409580)
chr4 (1-201)||(15865498-15865698)
chr4 (125-198)||(9489009-9489082)
chr4 (1-54)||(10630907-10630960)
chr4 (1-50)||(15254509-15254558)
chr4 (1-54)||(18081464-18081517)
chr4 (1-54)||(56580544-56580597)
chr4 (125-201)||(12515042-12515118)
chr4 (1-200)||(17484915-17485118)
chr4 (1-52)||(11496619-11496670)
chr4 (1-52)||(13823072-13823123)
chr4 (1-52)||(42709736-42709787)
chr4 (1-47)||(38426887-38426933)
chr4 (1-201)||(3354646-3354850)
chr4 (125-200)||(10630758-10630835)
chr4 (1-54)||(18292095-18292148)
chr4 (1-54)||(45234237-45234290)
chr4 (1-46)||(9488883-9488928)
chr4 (125-200)||(18291945-18292022)
chr4 (125-200)||(38426745-38426822)
chr4 (1-45)||(17296254-17296298)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-201)||(50511-50711)
[»] scaffold0566 (1 HSPs)
scaffold0566 (1-201)||(2612-2813)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-201)||(42095-42295)
[»] scaffold0089 (1 HSPs)
scaffold0089 (1-201)||(54854-55056)
[»] scaffold0384 (1 HSPs)
scaffold0384 (1-201)||(10570-10771)
[»] scaffold0512 (1 HSPs)
scaffold0512 (1-201)||(5090-5290)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-201)||(22160-22360)
[»] chr1 (15 HSPs)
chr1 (1-200)||(21784477-21784677)
chr1 (1-200)||(8947520-8947719)
chr1 (1-198)||(4027693-4027890)
chr1 (1-201)||(19875649-19875854)
chr1 (125-201)||(16382706-16382782)
chr1 (1-52)||(8653275-8653326)
chr1 (1-52)||(17094606-17094657)
chr1 (1-52)||(19364188-19364239)
chr1 (1-52)||(27047033-27047084)
chr1 (1-47)||(20237620-20237666)
chr1 (1-47)||(52938626-52938672)
chr1 (1-54)||(3990096-3990149)
chr1 (1-52)||(14070664-14070715)
chr1 (1-52)||(21798667-21798718)
chr1 (1-40)||(16382580-16382619)
[»] scaffold0116 (1 HSPs)
scaffold0116 (4-200)||(37751-37948)
[»] chr6 (27 HSPs)
chr6 (1-200)||(18731727-18731926)
chr6 (1-201)||(11203856-11204055)
chr6 (124-201)||(35270850-35270927)
chr6 (5-97)||(35270927-35271019)
chr6 (1-201)||(20107785-20107989)
chr6 (1-52)||(25963401-25963452)
chr6 (1-52)||(25968048-25968099)
chr6 (1-52)||(30671812-30671863)
chr6 (1-54)||(2181211-2181264)
chr6 (1-52)||(15699714-15699765)
chr6 (1-52)||(22165554-22165605)
chr6 (1-52)||(22243971-22244022)
chr6 (1-47)||(18448298-18448344)
chr6 (124-201)||(29686449-29686527)
chr6 (1-54)||(18184879-18184932)
chr6 (1-54)||(21560559-21560612)
chr6 (1-201)||(25625691-25625894)
chr6 (1-52)||(20170402-20170453)
chr6 (1-52)||(22061508-22061559)
chr6 (1-52)||(22767121-22767172)
chr6 (1-40)||(23023258-23023297)
chr6 (1-52)||(24855250-24855301)
chr6 (1-54)||(29595846-29595899)
chr6 (1-52)||(23517836-23517887)
chr6 (1-47)||(18854175-18854221)
chr6 (125-201)||(23023093-23023171)
chr6 (1-201)||(25631274-25631477)
[»] scaffold0011 (3 HSPs)
scaffold0011 (1-201)||(161854-162053)
scaffold0011 (1-201)||(172111-172312)
scaffold0011 (1-54)||(164408-164461)
[»] scaffold0861 (1 HSPs)
scaffold0861 (1-200)||(766-965)
[»] scaffold0037 (2 HSPs)
scaffold0037 (1-201)||(72577-72777)
scaffold0037 (1-201)||(84767-84967)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-201)||(22614-22813)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-131)||(18127-18258)
[»] scaffold0375 (1 HSPs)
scaffold0375 (1-201)||(12587-12789)
[»] scaffold0117 (1 HSPs)
scaffold0117 (1-176)||(45233-45408)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-199)||(37722-37921)
[»] scaffold1225 (1 HSPs)
scaffold1225 (1-202)||(1694-1897)
[»] scaffold0974 (1 HSPs)
scaffold0974 (1-54)||(1260-1313)
[»] scaffold0582 (1 HSPs)
scaffold0582 (1-54)||(8811-8864)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-54)||(983-1036)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-54)||(121104-121157)
[»] scaffold0157 (1 HSPs)
scaffold0157 (125-201)||(5793-5869)
[»] scaffold0230 (1 HSPs)
scaffold0230 (1-52)||(15837-15888)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-52)||(123528-123579)
[»] scaffold0506 (1 HSPs)
scaffold0506 (1-54)||(2292-2345)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-54)||(10211-10264)
[»] scaffold0162 (1 HSPs)
scaffold0162 (1-54)||(35109-35162)
[»] scaffold0113 (2 HSPs)
scaffold0113 (1-54)||(370-423)
scaffold0113 (162-201)||(220-260)
[»] scaffold0096 (1 HSPs)
scaffold0096 (1-54)||(38513-38566)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-54)||(58633-58686)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-54)||(97731-97784)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-54)||(11206-11259)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-54)||(251875-251928)
[»] scaffold0078 (1 HSPs)
scaffold0078 (120-200)||(30498-30578)
[»] scaffold0773 (1 HSPs)
scaffold0773 (1-40)||(643-682)
[»] scaffold0059 (1 HSPs)
scaffold0059 (1-52)||(12555-12606)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-52)||(232792-232843)
[»] scaffold0825 (1 HSPs)
scaffold0825 (1-198)||(2857-3058)
[»] scaffold0679 (1 HSPs)
scaffold0679 (1-47)||(8098-8144)
[»] scaffold0404 (2 HSPs)
scaffold0404 (1-47)||(3473-3519)
scaffold0404 (1-47)||(1202-1248)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-47)||(515-561)
[»] scaffold0315 (1 HSPs)
scaffold0315 (1-54)||(14667-14720)
[»] scaffold0094 (2 HSPs)
scaffold0094 (161-201)||(1041-1081)
scaffold0094 (1-52)||(1193-1244)
[»] scaffold1095 (1 HSPs)
scaffold1095 (152-201)||(2859-2910)
[»] scaffold0215 (1 HSPs)
scaffold0215 (1-40)||(620-659)
[»] scaffold0218 (1 HSPs)
scaffold0218 (162-200)||(25624-25662)


Alignment Details
Target: chr3 (Bit Score: 161; Significance: 5e-86; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 12776539 - 12776739
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||    
T  12776539 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaggattaatatatgacaattcaaataaaagcttatg 12776638  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||||    
T  12776639 tctccctcgaggtttcatttcaatgtacactaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtctcaagtgagtgtgtgtgt 12776738  T
Q  201 g 201  Q
    |    
T  12776739 g 12776739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 3339231 - 3339431
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||    
T  3339231 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaggattaatatatgacaattcaaataaaagcttatg 3339330  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||| |||||| ||||||||||||||||    
T  3339331 tctccctcgaggtttcatttcaatgtacactaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgt 3339430  T
Q  201 g 201  Q
    |    
T  3339431 g 3339431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 15946819 - 15946619
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  15946819 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacacggcagcaacaaaaggattaatatgtgacactttaaataaaagcttatg 15946720  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| |||||||||| |||| || ||||||||||||||||||||    
T  15946719 tctccctcgaggtttcatttcaatgtacactaatcacaacttcaagcattccttgtaaacttattcaacccgacaacaaatctcaagtgagtgtgtgtgt 15946620  T
Q  201 g 201  Q
    |    
T  15946619 g 15946619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 15619288 - 15619489
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||| ||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  15619288 aactgccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaggattaatatatgacactttaaattaaagcttatg 15619387  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaac-ctattcaacccaacaataagtctcaagtgagtgtgtgtg 199  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||| | ||||||||  ||||||||||||||| || ||| |||||||||| ||||    
T  15619388 tctccctcgaggtttcatttcaacgtacactaatcacaacttcaagtattctttgtaaactttattcaacccaacaacaaatcttaagtgagtgtatgtg 15619487  T
Q  200 tg 201  Q
    ||    
T  15619488 tg 15619489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 13136215 - 13136391
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataa-aagcttat 99  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||    
T  13136215 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatgtcagcaacaaaaggattaatatatgacactttaaataataagcttat 13136314  T
Q  100 gtctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaa 176  Q
    |||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| |||||||||| ||||    
T  13136315 gtctccctcgaggtttcatttcaatgtacactaatcacaacttcaagcattccttgtaaacttattcaacccgacaa 13136391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 13195463 - 13195665
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaa--ggattaatatatgacactttaaataaaagctta 98  Q
    ||||||| |||||||||||||||| |||||||||||||||  ||||||||||||| |||||||||  |||||||||||||||| || |||||||||||||    
T  13195463 aactcccacacacttgaatctttgcttgtcctcaagcaaaatgcatagacatggcagcaacaaaaaaggattaatatatgacaattcaaataaaagctta 13195562  T
Q  99 tgtctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgt 198  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||  ||| ||||||||||||||  |||||| ||||||||||||||    
T  13195563 tgtctccttcgaggtttcatttcaatgtacactaatcacaacttcaagtattccttgagaacttattcaacccaacatcaagtcttaagtgagtgtgtgt 13195662  T
Q  199 gtg 201  Q
    |||    
T  13195663 gtg 13195665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 14445773 - 14445969
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||   ||||||| ||||||||||| ||| || ||||||||| |||||    
T  14445773 aactcccccacacttgaatctttgcttgtcctaaagcaaaaggcatagacatagc---aacaaaaagattaatatataacaattcaaataaaagtttatg 14445869  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    || || |  |||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||| |||||| ||||||||||||||||    
T  14445870 tcccctttaaggtttcatttcaatgtacactaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgt 14445969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 49 - 201
Target Start/End: Complemental strand, 20565786 - 20565633
Alignment:
Q  49 acatggccgcaacaaaa-ggattaatatatgacactttaaataaaagcttatgtctccctcgaggtttcatttcaatgtacactaatcacaacttccagt 147  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||    
T  20565786 acatggcagcaacaaaaaggattaatatatgacactttaaataaaagcttatgtctcccttgaggtttcctttcaatgtacactaatcacaacttcaagt 20565687  T
Q  148 atcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgtg 201  Q
    || | |||||||| ||||||||||||||| || ||| |||||||||| ||||||    
T  20565686 attctttgtaaacttattcaacccaacaacaaatcttaagtgagtgtatgtgtg 20565633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 13068352 - 13068149
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaag-gattaatatatgacactttaaataaaagcttat 99  Q
    |||||||||||||||||||||||  |||||||||| |||| | |||||| || || |||||||||  ||||||||||| ||| | | |||||||||||||    
T  13068352 aactcccccacacttgaatctttacttgtcctcaaccaaaagacatagaaatagcagcaacaaaaaagattaatatataacaatattaataaaagcttat 13068253  T
Q  100 gtctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaac-ctattcaacccaacaataagtc-tcaagtgagtgtgtg 197  Q
     || |  |||||||||||||||||||||||||| |||||||||| ||||| |||||| |||  ||||||||||| ||| ||||| | |||||||||||||    
T  13068252 ttccctttcgaggtttcatttcaatgtacactactcacaacttcaagtattccttgtgaactttattcaacccatcaacaagtcttaaagtgagtgtgtg 13068153  T
Q  198 tgtg 201  Q
    ||||    
T  13068152 tgtg 13068149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 4 - 202
Target Start/End: Complemental strand, 17045902 - 17045703
Alignment:
Q  4 tcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatgtct 103  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| | || |  |||  || | |||||| |||||||| || || ||||| |||||||||    
T  17045902 tcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaaaatagtagcataaacaagattaacatatgacaattcaattaaaaacttatgtct 17045803  T
Q  104 ccctcgaggtttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgtga 202  Q
    ||    ||| || ||||||| |||||||||||||||||||| ||||| |||||| ||||||||||||||||||| || |  |||||||||||||||||||    
T  17045802 cctcaaaggctttatttcaagtgtacactaatcacaacttcaagtattccttgtgaacctattcaacccaacaacaaattccaagtgagtgtgtgtgtga 17045703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 4 - 202
Target Start/End: Complemental strand, 17048062 - 17047863
Alignment:
Q  4 tcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatgtct 103  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| | || |  |||  || | |||||| |||||||| || || ||||| |||||||||    
T  17048062 tcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaaaatagtagcataaacaagattaacatatgacaattcaattaaaaacttatgtct 17047963  T
Q  104 ccctcgaggtttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgtga 202  Q
    ||    ||| || ||||||| |||||||||||||||||||| ||||| |||||| ||||||||||||||||||| || |  |||||||||||||||||||    
T  17047962 cctcaaaggctttatttcaagtgtacactaatcacaacttcaagtattccttgtgaacctattcaacccaacaacaaattccaagtgagtgtgtgtgtga 17047863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 86 - 201
Target Start/End: Complemental strand, 20561132 - 20561017
Alignment:
Q  86 aaataaaagcttatgtctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctca 185  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| | |||||||| ||||||||||||||| || ||| |    
T  20561132 aaataaaagcttatgtctcccttgaggtttcctttcaatgtacactaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaaatctta 20561033  T
Q  186 agtgagtgtgtgtgtg 201  Q
    ||||||||| ||||||    
T  20561032 agtgagtgtatgtgtg 20561017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 86 - 201
Target Start/End: Complemental strand, 20563440 - 20563325
Alignment:
Q  86 aaataaaagcttatgtctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctca 185  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| | |||||||| ||||||||||||||| || ||| |    
T  20563440 aaataaaagcttatgtctcccttgaggtttcctttcaatgtacactaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaaatctta 20563341  T
Q  186 agtgagtgtgtgtgtg 201  Q
    ||||||||| ||||||    
T  20563340 agtgagtgtatgtgtg 20563325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 20225759 - 20225960
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||| |||| |||||||| ||||||||||||||| | |||| |||| || |||  || | |||||| ||||||||    || ||||| ||||||    
T  20225759 aactcccccatacttaaatctttgtttgtcctcaagcaaaagacataaacatagcagcataaataagattaacatatgacaaaacaattaaaaacttatg 20225858  T
Q  101 tctccctcgaggtttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtg 199  Q
    |||||    ||| || ||||||| |||||||||||||||||||| || || |||||| ||||||||||||||| ||| |||| |||||| ||||||||||    
T  20225859 tctcctcaaaggctttatttcaagtgtacactaatcacaacttcaagcattccttgtgaacctattcaacccagcaacaagtttcaagtaagtgtgtgtg 20225958  T
Q  200 tg 201  Q
    ||    
T  20225959 tg 20225960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 13601272 - 13601068
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaa--taaaagctta 98  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||| ||||  |  ||| || | ||||||||||||||   | | |  ||| | |||     
T  13601272 aactcccccacacttgaatctttgcttgttctcaagcaaaaggcataaacataacatcaaaaacaagattaatatatgaccaataacaattaagaacttt 13601173  T
Q  99 tgtctccctcgaggtttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtg 197  Q
    |||||||    ||| || ||||| | ||| |||||||||||||||| || || |||||| ||||||||||||||||||| |||| |||||||||||||||    
T  13601172 tgtctcctcaaaggctttatttcgagtgtgcactaatcacaacttcaagcattccttgtgaacctattcaacccaacaacaagtttcaagtgagtgtgtg 13601073  T
Q  198 tgtga 202  Q
    |||||    
T  13601072 tgtga 13601068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14348593 - 14348646
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  14348593 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatgg 14348646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20584313 - 20584261
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatg 53  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  20584313 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatg 20584261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 3245593 - 3245795
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| |||| |  |||  || | |||||  |||||||| || || ||||| ||||||    
T  3245593 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcataaacaagattatcatatgacaattcaattaaaa-cttatg 3245691  T
Q  101 tctccctcgagg-tttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaac-ctattcaacccaacaat-aagtctcaagtgagtgtgt 196  Q
    |||||    ||| ||| |||||||  |||||||||||||||  || || ||  ||||||| |  |||||||||||||||| ||||||||||||||| |||    
T  3245692 tctcctcaaaggcttttatttcaagcgtacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagtctcaagtgagtatgt 3245791  T
Q  197 gtgt 200  Q
    ||||    
T  3245792 gtgt 3245795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3279394 - 3279343
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  3279394 aactcccccacacttgaatctttgtttgtcctcaagcaaaaggcatagacat 3279343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4382956 - 4382903
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  4382956 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 4382903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10546941 - 10546994
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  10546941 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 10546994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13001430 - 13001483
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  13001430 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 13001483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 8686518 - 8686594
Alignment:
Q  125 gtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgtg 201  Q
    |||||||||||| |||||| || ||  ||| | ||||||||||||||||||| |||||| |||||||||||||||||    
T  8686518 gtacactaatcagaacttcaagcatttcttatgaacctattcaacccaacaacaagtcttaagtgagtgtgtgtgtg 8686594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10602477 - 10602528
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  10602477 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 10602528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13504886 - 13504937
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  13504886 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 13504937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27356733 - 27356784
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  27356733 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 27356784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 2721502 - 2721305
Alignment:
Q  6 ccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatgtctcc 105  Q
    ||||||||||||||||||| ||||||||||||||| |||||| |||| || |||  || | |||||  |||||||| || || ||||| |||||||||||    
T  2721502 ccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagcagcataaacaagattataatatgacaattcaattaaaa-cttatgtctcc 2721404  T
Q  106 ctcgagg-tttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaac-ctattcaacccaacaat-aagtctcaagtgagtgtgtgtgt 200  Q
        ||| ||| | |||||  |||||||||||||||  || || ||  ||||||| |  |||||||||||||||| |||| ||||||||||||||||||    
T  2721403 tcaaaggcttttaattcaagcgtacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagtttcaagtgagtgtgtgtgt 2721305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9360976 - 9361029
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||||    
T  9360976 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 9361029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12160212 - 12160265
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||| ||||||    
T  12160212 aactcccccacacttgaatctttgcttgtcctcaagcaaaatgcataaacatgg 12160265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13690811 - 13690758
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    ||||||||||||||||||||||| |||||| ||||||||| |||||| ||||||    
T  13690811 aactcccccacacttgaatctttagttgtcatcaagcaaaaggcataaacatgg 13690758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16448765 - 16448818
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||||    
T  16448765 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 16448818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 13097914 - 13097711
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||| ||||||||||| ||||||||||| ||| |||||| ||||||  |||  || | ||||| |  |||||| ||||| ||||| |  |||    
T  13097914 aactcccccacatttgaatctttgcttgtcctcaagtaaaaggcataaacatggtagcataaacaagattacttcatgacaatttaattaaaa-cacatg 13097816  T
Q  101 tctccctcgagg-tttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaacc-tattcaacccaacaat-aagtctcaagtgagtgtgt 196  Q
    |||||    ||| ||| ||||||| ||||||||||||||||  || || || | |||||| || | |||||||||||||| |||| ||||||||||||||    
T  13097815 tctcctcaaaggctttaatttcaagtgtacactaatcacaaactcaagcattctttgtaatcctttttcaacccaacaatcaagtttcaagtgagtgtgt 13097716  T
Q  197 gtgtg 201  Q
    |||||    
T  13097715 gtgtg 13097711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 20156520 - 20156722
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||| | |||||||||||||||  ||||| ||||||  |||  || | ||| |  |||||||| || || ||||| || |||    
T  20156520 aactcccccacacttgaatctt-gcttgtcctcaagcaaaatgcataaacatggtagcataaacaagataatcatatgacaattaaattaaaa-ctcatg 20156617  T
Q  101 tctccctcgagg-tttcatttcaatgt-acactaatcacaacttccagtatcccttgtaaacct-attcaacccaacaat-aagtctcaagtgagtgtgt 196  Q
    |||||    ||| ||| |||||||| | |||||||||||||  || || ||  ||||||||| | ||||||||||||||| |||||||||||||||||||    
T  20156618 tctcctcaaaggcttttatttcaattttacactaatcacaagctcaagcatttcttgtaaactttattcaacccaacaatcaagtctcaagtgagtgtgt 20156717  T
Q  197 gtgtg 201  Q
    |||||    
T  20156718 gtgtg 20156722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 7600565 - 7600514
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  7600565 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 7600514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10160178 - 10160229
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  10160178 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 10160229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11947617 - 11947566
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||| ||||    
T  11947617 aactcccccacacttgaatctttacttgtcctcaagcaaaaggcataaacat 11947566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12187081 - 12187132
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  12187081 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 12187132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13187422 - 13187473
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  13187422 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 13187473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 15556947 - 15556998
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||| ||||    
T  15556947 aactcccccacacttgaatctttgcttgtcctcaagaaaaaggcataaacat 15556998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15645211 - 15645160
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  15645211 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 15645160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16373570 - 16373621
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  16373570 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 16373621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 37942588 - 37942537
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  37942588 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 37942537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11398419 - 11398373
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcata 47  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  11398419 aactcccccacacttgaatatttgcttgtcctcaagcaaaaggcata 11398373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17388040 - 17387995
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcat 46  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||    
T  17388040 aactcccccacacttgaatctttgcttgtccttaagcaaaaggcat 17387995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6815078 - 6815027
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    ||||||| || ||||||||||||| ||||||||||||||| |||||| ||||    
T  6815078 aactccctcatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 6815027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10147221 - 10147170
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| |||||| |||||| ||||||||||||||| |||||| ||||    
T  10147221 aactcccccatacttgagtctttgcttgtcctcaagcaaaaggcataaacat 10147170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12193495 - 12193546
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| || |||||||||| ||||||||||||||| |||||| ||||    
T  12193495 aactcccccatacctgaatctttgcttgtcctcaagcaaaaggcataaacat 12193546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 162 - 201
Target Start/End: Complemental strand, 16703195 - 16703156
Alignment:
Q  162 tattcaacccaacaataagtctcaagtgagtgtgtgtgtg 201  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  16703195 tattcaacccaacaacaagtctcaagtgagtgtgtctgtg 16703156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 201
Target Start/End: Complemental strand, 11398255 - 11398215
Alignment:
Q  162 tattcaacccaacaat-aagtctcaagtgagtgtgtgtgtg 201  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  11398255 tattcaacccaacaatcaagtttcaagtgagtgtgtgtgtg 11398215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 157; Significance: 1e-83; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 22370153 - 22369953
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||    
T  22370153 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaggattaatatatgacaattcaaataaaagcttatg 22370054  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||| |||||| ||||||||||||||||    
T  22370053 tctccctcgaggtttcatttcaatgtacactaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgt 22369954  T
Q  201 g 201  Q
    |    
T  22369953 g 22369953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 22033560 - 22033760
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22033560 aactcccccacacttgaatctttgcttgtcctcaagcaaaagacatagacatggcagcaacaaaaggattaatatatgacactttaaataaaagcttatg 22033659  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||| | |||||||| ||||||||||||||| || ||| |||||||||| |||||    
T  22033660 tctccctcgaggtttcatttcaacgtacactaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaaatcttaagtgagtgtatgtgt 22033759  T
Q  201 g 201  Q
    |    
T  22033760 g 22033760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 11346958 - 11347158
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||| || |||||||||||||||    
T  11346958 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaataaaaagattaatatatgacaattcaaataaaagcttatg 11347057  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||| |||||| ||||||||||||||||    
T  11347058 tctccttcgaggtttcatttcaatgtacactaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgt 11347157  T
Q  201 g 201  Q
    |    
T  11347158 g 11347158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 21831227 - 21831027
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| | |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21831227 aactcccccacacttgaatctttgcttgtcctcaagcaaaagacatagacacggcagcaacaaaaggattaatatatgacactttaaataaaagcttatg 21831128  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||| | |||||||| ||||||||||||||| || ||| |||||||||| |||||    
T  21831127 tctccctcgaggtttcatttcaacgtacactaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaaatcttaagtgagtgtatgtgt 21831028  T
Q  201 g 201  Q
    |    
T  21831027 g 21831027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 22102603 - 22102403
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  22102603 aactcccctacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggaagcaacaaaaggattaatatatgacactttaaataaaatcttatg 22102504  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| |||||||||| |||| || | ||||||||||| ||||||    
T  22102503 tctccctcgaggtttcatttcaatgtacactaatcacaacttcaagcattccttgtaaacttattcaacccgacaacaaatttcaagtgagtgcgtgtgt 22102404  T
Q  201 g 201  Q
    |    
T  22102403 g 22102403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 19767735 - 19767538
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| || |||| ||||||||||    
T  19767735 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaggattaatatatgacaattcaaattaaagcttatg 19767636  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| ||| |||||||||||||   |||||| ||||||||||||||||    
T  19767635 tctccctcgaggtttcatttcaatgtacactaatcataacttcaagtattccttgtgaacttattcaacccaac---aagtcttaagtgagtgtgtgtgt 19767539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 22099660 - 22099860
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| | |||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||    
T  22099660 aactcccccacacttgaatctttgcttgtcctcaagcaaaagacatagacatggcagcaacaaaaggattaatatatgtcactttaaataaaaacttatg 22099759  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||| ||||||||||||||||||| ||||||||||||||||||| ||||| | |||||||| ||||||||||||||| || ||| |||||||||| |||||    
T  22099760 tctgcctcgaggtttcatttcaacgtacactaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaaatcttaagtgagtgtatgtgt 22099859  T
Q  201 g 201  Q
    |    
T  22099860 g 22099860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 200
Target Start/End: Original strand, 14352181 - 14352378
Alignment:
Q  7 cccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatgtctccc 106  Q
    |||||||||||||||||| ||||||||||||||| | |||| ||||||  |||  || | ||| | ||||||||| || |||| ||| || ||||||||     
T  14352181 cccacacttgaatctttgcttgtcctcaagcaaaagacataaacatggtagcataaacaagataattatatgacaattaaaattaaaactcatgtctcct 14352280  T
Q  107 tcgagg-tttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaac-ctattcaacccaacaat-aagtctcaagtgagtgtgtgtgt 200  Q
     ||||| ||| |||||||  |||||||||| || |  || || || | |||||| |  |||||||||||||||| |||||||||||||||||||||||    
T  14352281 ccgaggcttttatttcaagcgtacactaattactaactcaagcattctttgtaatctttattcaacccaacaatcaagtctcaagtgagtgtgtgtgt 14352378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20038986 - 20039039
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  20038986 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 20039039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21098799 - 21098852
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  21098799 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 21098852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21104120 - 21104173
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  21104120 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 21104173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21843529 - 21843582
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  21843529 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 21843582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 24034225 - 24034120
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaag-gattaatatatgacactttaaataaaagcttat 99  Q
    |||||||||||||||||||||||| |||||| |||||||| |||||| |||| |  |||| ||| | ||||||||||||||| || || | ||| |||||    
T  24034225 aactcccccacacttgaatctttgcttgtccacaagcaaaaggcataaacatagtagcaataaacgagattaatatatgacaattcaattgaaaacttat 24034126  T
Q  100 gtctcc 105  Q
    ||||||    
T  24034125 gtctcc 24034120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 20002325 - 20002278
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatag 48  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||    
T  20002325 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatag 20002278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16418625 - 16418678
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||| ||||||    
T  16418625 aactcccccacacttgaatctttgcttgttctcaagcaaaaggcataaacatgg 16418678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17620956 - 17620903
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||||| ||||||    
T  17620956 aactcccccacacttgaatttttgcttgtcctcaagcaaaaggcataaacatgg 17620903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21940001 - 21940054
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||| ||||||    
T  21940001 aactcccccacacttgaatctttgcttgttctcaagcaaaaggcataaacatgg 21940054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 8314678 - 8314627
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  8314678 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 8314627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 21382304 - 21382253
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  21382304 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 21382253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 23911650 - 23911599
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  23911650 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 23911599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22817801 - 22817751
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagaca 51  Q
    |||||||||||||||||||||||| || |||||||||||| | ||||||||    
T  22817801 aactcccccacacttgaatctttgcttttcctcaagcaaaagacatagaca 22817751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20712644 - 20712591
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||| |||||| |||||||| ||||||||||||||| |||||| ||||||    
T  20712644 aactcccctacacttaaatctttgcttgtcctcaagcaaaaggcataaacatgg 20712591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8322851 - 8322902
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    ||||||| || ||||||||||||| ||||||||||||||| |||||| ||||    
T  8322851 aactccctcatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 8322902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 21843682 - 21843733
Alignment:
Q  152 cttgtaaacct-attcaacccaacaat-aagtctcaagtgagtgtgtgtgtg 201  Q
    ||||||||||| ||||||||||||||| |||| |||||||||||||||||||    
T  21843682 cttgtaaaccttattcaacccaacaatcaagtttcaagtgagtgtgtgtgtg 21843733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 23455144 - 23455097
Alignment:
Q  5 cccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||| |||||||| |||||| |||||| ||||    
T  23455144 cccccacacttgaatctttgcttgtcctcgagcaaaaggcataaacat 23455097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 21538757 - 21538707
Alignment:
Q  4 tcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||| ||| |||| ||||||||||||||| |||||| ||||||    
T  21538757 tcccccacacttaaatttttgcttgtcctcaagcaaaaggcataaacatgg 21538707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 1e-83; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 23159390 - 23159590
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  23159390 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaggattaatatatgacaatttaaataaaagcttatg 23159489  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||||||||| ||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  23159490 tctccctcgaggtctcatttcaatgtacactaatcacaacttgaagtattccttgtaaacttattcaacccaacaacaaatctcaagtgagtgtgtgtgt 23159589  T
Q  201 g 201  Q
    |    
T  23159590 g 23159590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 23570647 - 23570847
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  23570647 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaggattaatatatgacaatttaaataaaagcttatg 23570746  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||||||||| ||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  23570747 tctccctcgaggtctcatttcaatgtacactaatcacaacttgaagtattccttgtaaacttattcaacccaacaacaaatctcaagtgagtgtgtgtgt 23570846  T
Q  201 g 201  Q
    |    
T  23570847 g 23570847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 27631706 - 27631506
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27631706 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaggattaatatatgacactttaaataaaagcttatg 27631607  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| |||||||||| |||| || | ||||||||||||||||||    
T  27631606 tctccctcgaggtttcatttcaatgtacactaatcacaacttcaagcattccttgtaaacttattcaacccgacaacaaatttcaagtgagtgtgtgtgt 27631507  T
Q  201 g 201  Q
    |    
T  27631506 g 27631506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 27768821 - 27769021
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  27768821 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaggattaatatatgacactttaaataaaaacttatg 27768920  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||| | |||||||| ||||||||||||||| || ||| |||||||||| |||||    
T  27768921 tctccctcgaggtttcatttcaacgtacactaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaaatcttaagtgagtgtatgtgt 27769020  T
Q  201 g 201  Q
    |    
T  27769021 g 27769021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 24171556 - 24171355
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||| || || ||||||||| ||||||||||||||| || ||||| |||| ||||    
T  24171556 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagatatagcagcaacaaaaagattaatatatgacaattcaaatagaagcatatg 24171457  T
Q  101 tctccctcga-ggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtg 199  Q
    |||| ||  | ||||||||||||||||||||||||||||||||| ||||| |||||| |||| |||||||||||||| |||||| |||||||||||||||    
T  24171456 tctctctttaaggtttcatttcaatgtacactaatcacaacttcgagtattccttgtgaaccaattcaacccaacaacaagtcttaagtgagtgtgtgtg 24171357  T
Q  200 tg 201  Q
    ||    
T  24171356 tg 24171355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 15 - 201
Target Start/End: Complemental strand, 23648165 - 23647980
Alignment:
Q  15 tgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatgtctccctcgaggtt 114  Q
    |||||||||| |||||||||||||||  |||||||||| |  | || |||| ||| || ||||| || || ||||||||||||||||||||    |||||    
T  23648165 tgaatctttgcttgtcctcaagcaaaatgcatagacatagtagtaataaaaagat-aacatatggcatttcaaataaaagcttatgtctcctctaaggtt 23648067  T
Q  115 tcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgtg 201  Q
    ||||||||||||||||||||||||||||| | ||| || ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  23648066 tcatttcaatgtacactaatcacaacttcaaatattccatgtgaacctattcaacccaacaacaagtctcaagtgagtgtgtgtgtg 23647980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 25144762 - 25144966
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgca-acaaaaggattaatatatgacactttaaataaaagcttat 99  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||  ||| | || |  ||||  |||||||| ||||| ||||| |  ||    
T  25144762 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaacaatattatcatatgacaatttaattaaaa-cacat 25144860  T
Q  100 gtctccctcgagg--tttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaacc-tattcaacccaacaat-aagtctcaagtgagtgt 194  Q
    |||| |||| |||  ||  |||||||  |||||||||||||||  || || ||  |||||||||| |||||||||||||||| |||| ||||||||||||    
T  25144861 gtct-cctcaagggcttcaatttcaagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtgagtgt 25144959  T
Q  195 gtgtgtg 201  Q
    |||||||    
T  25144960 gtgtgtg 25144966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5500270 - 5500323
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  5500270 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 5500323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 24178198 - 24178302
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||| |||| |||| |||||| |||| || |||  || | |||||  |||||||| ||||| ||||| ||||||    
T  24178198 aactcccccacacttgaatctttgcttgtcttcaaacaaaaggcataaacatagcagcataaacaagattatcatatgacaatttaattaaaaacttatg 24178297  T
Q  101 tctcc 105  Q
    |||||    
T  24178298 tctcc 24178302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 24321253 - 24321177
Alignment:
Q  125 gtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgtg 201  Q
    ||||||||||||||||||| || ||  ||  | ||||||||||||||||||| ||||||||| ||||||||||||||    
T  24321253 gtacactaatcacaacttcaagcatttctcatgaacctattcaacccaacaacaagtctcaaatgagtgtgtgtgtg 24321177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 25804272 - 25804352
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgaca 81  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| |||| || |||  || | |||||| ||||||||    
T  25804272 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagcagcacaaacaagattaacatatgaca 25804352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22665272 - 22665221
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  22665272 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 22665221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23644155 - 23644102
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| | |||| ||||||    
T  23644155 aactcccccacacttgaatctttgcttgtcctcaagcaaaagacataaacatgg 23644102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 26191785 - 26191841
Alignment:
Q  145 agtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgtg 201  Q
    ||||| |||||| ||| ||||||||||||||| |||||| |||||||||||||||||    
T  26191785 agtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgtg 26191841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 15532796 - 15532753
Alignment:
Q  158 aacctattcaacccaacaataagtctcaagtgagtgtgtgtgtg 201  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  15532796 aacctattcaacccaacaacaagtttcaagtgagtgtgtgtgtg 15532753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 16775861 - 16775810
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  16775861 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 16775810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 17590617 - 17590566
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  17590617 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 17590566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 22044665 - 22044716
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  22044665 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 22044716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23798927 - 23798978
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| || |||||||||||| |||||| ||||    
T  23798927 aactcccccacacttgaatctttgattatcctcaagcaaaaggcataaacat 23798978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 24019224 - 24019267
Alignment:
Q  158 aacctattcaacccaacaataagtctcaagtgagtgtgtgtgtg 201  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  24019224 aacctattcaacccaacaacaagtttcaagtgagtgtgtgtgtg 24019267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25357721 - 25357670
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  25357721 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 25357670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 25370890 - 25370929
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  25370890 aactcccccacacttgaatctttgcttgtcctcaagcaaa 25370929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 27627791 - 27627740
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  27627791 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 27627740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24795290 - 24795336
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcata 47  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  24795290 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcata 24795336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 20851640 - 20851597
Alignment:
Q  158 aacctattcaacccaacaataagtctcaagtgagtgtgtgtgtg 201  Q
    ||||||||||||||||||  |||||||||||||||| |||||||    
T  20851640 aacctattcaacccaacatcaagtctcaagtgagtgagtgtgtg 20851597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 24321379 - 24321340
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaa 40  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  24321379 aactcccccatacttgaatctttgcttgtcctcaagcaaa 24321340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 24506860 - 24506821
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaa 40  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  24506860 aactcccccacacttgaatcttttattgtcctcaagcaaa 24506821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 25582934 - 25582977
Alignment:
Q  158 aacctattcaacccaacaataagtctcaagtgagtgtgtgtgtg 201  Q
    ||||||||||||||||||| || | |||||||||||||||||||    
T  25582934 aacctattcaacccaacaacaaatttcaagtgagtgtgtgtgtg 25582977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11620 - 11666
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcata 47  Q
    ||||||||||||||||  |||||| ||||||||||||||| ||||||    
T  11620 aactcccccacacttgcctctttgcttgtcctcaagcaaaaggcata 11666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 117753 - 117707
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcata 47  Q
    |||||||||||||||| || |||| ||||||||||||||| ||||||    
T  117753 aactcccccacacttgcatatttgcttgtcctcaagcaaaaggcata 117707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 23257579 - 23257625
Alignment:
Q  6 ccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    ||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  23257579 ccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 23257625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 201
Target Start/End: Complemental strand, 24502208 - 24502168
Alignment:
Q  162 tattcaacccaacaat-aagtctcaagtgagtgtgtgtgtg 201  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  24502208 tattcaacccaacaatcaagtttcaagtgagtgtgtgtgtg 24502168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 3e-81; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 15065979 - 15065779
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  15065979 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcaaagacatggcagcaacaaaaggattaatatatgacaccttaaataaaagcttatg 15065880  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| |||||||||| |||| || ||||||||||||||||||||    
T  15065879 tctccctcgaggtttcatttcaatgtacactaatcacaacttcaagcattccttgtaaacttattcaacccgacaacaaatctcaagtgagtgtgtgtgt 15065780  T
Q  201 g 201  Q
    |    
T  15065779 g 15065779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 14221723 - 14221924
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaa-ggattaatatatgacactttaaataaaagcttat 99  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| ||||||| ||||||||||||||||| ||||||||    
T  14221723 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaaggattaaaatatgacactttaaatagaagcttat 14221822  T
Q  100 gtctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtg 199  Q
    ||||||||| |||||||||||||||||||| | ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14221823 gtctccctcaaggtttcatttcaatgtacattgatcacaacttcaagtattccttgtaaacctattcaacccaacaagaagtctcaagtgagtgtgtgtg 14221922  T
Q  200 tg 201  Q
    ||    
T  14221923 tg 14221924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 825834 - 825634
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||| |  |||||||||||||||    
T  825834 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaagattaatatatgacaatgcaaataaaagcttatg 825735  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||| |||||| ||||||||||||||||    
T  825734 tctccctcgaggtttcatttcaatgtacactaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgt 825635  T
Q  201 g 201  Q
    |    
T  825634 g 825634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 18287812 - 18287612
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18287812 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaggattaatatatgacactttaaataaaagcttatg 18287713  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    |||| |||||||||||||||||||||||||||||||||||||| || || |||||||||| |||||||||| |||| || | |||||||||||| |||||    
T  18287712 tctctctcgaggtttcatttcaatgtacactaatcacaacttcaagcattccttgtaaacttattcaacccgacaacaaatttcaagtgagtgtctgtgt 18287613  T
Q  201 g 201  Q
    |    
T  18287612 g 18287612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 15916781 - 15916981
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||| ||||||||||||||| || |||||||||||||||    
T  15916781 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcaacaacaaaaagattaatatatgacaattcaaataaaagcttatg 15916880  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||| |||||| ||| ||||||||||||||| |||||| ||||||||||||||||    
T  15916881 tctccctcgaggtttcatttcaatgttcactaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgt 15916980  T
Q  201 g 201  Q
    |    
T  15916981 g 15916981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 27291547 - 27291346
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaagg-attaatatatgacactttaaataaaagcttat 99  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||    
T  27291547 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaagtattaatatatgacactttaaataaaagcttat 27291448  T
Q  100 gtctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtg 199  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| ||||| | |||||||| ||||||||||||||| || ||| |||||||||| ||||    
T  27291447 gtctcccttgaggtttcatttcaacgtacactaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaaatcttaagtgagtgtatgtg 27291348  T
Q  200 tg 201  Q
    ||    
T  27291347 tg 27291346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 5397326 - 5397126
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||||||| || | ||||||| ||||||||||||||| || |||||||||||||||    
T  5397326 aactcccctacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagcagaaacaaaaagattaatatatgacaattcaaataaaagcttatg 5397227  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||  ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||| |||||| ||||||||||||||||    
T  5397226 tctctttcgaggtttcatttcaatgtacactaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgt 5397127  T
Q  201 g 201  Q
    |    
T  5397126 g 5397126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 15206589 - 15206790
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacac-tttaaataaaagcttat 99  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||| || |||||||||  ||||||||||||||  |||||||||||||||||    
T  15206589 aactcccccacacttgaatctttgcttgtcctcaagaaaaaggcatagacatagcagcaacaaaaatattaatatatgacaaatttaaataaaagcttat 15206688  T
Q  100 gtctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtg 199  Q
    |||||| ||||||||| |||||||||||||||||| |||||||| ||||| |||||| ||| ||||||||||||||| |||||| || ||||||||||||    
T  15206689 gtctccttcgaggttttatttcaatgtacactaattacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaaatgagtgtgtgtg 15206788  T
Q  200 tg 201  Q
    ||    
T  15206789 tg 15206790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 4791387 - 4791587
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||| ||||||||||||| ||||||||||||| |  ||||||||||||| |||| |||| |||||| |||||||| || || ||||| ||||||    
T  4791387 aactcccccatacttgaatctttgcttgtcctcaagcagaatgcatagacatggcagcaataaaaagattaacatatgacaattcaattaaaaacttatg 4791486  T
Q  101 tctcc-ctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtg 199  Q
    ||||| ||  ||| || |||||||||||||||||||| || |||  |||| |||||| ||||||||||||||||||| |||||||||| |||||||||||    
T  4791487 tctcctcttaaggctttatttcaatgtacactaatcaaaatttcaggtattccttgtgaacctattcaacccaacaacaagtctcaagcgagtgtgtgtg 4791586  T
Q  200 t 200  Q
    |    
T  4791587 t 4791587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 4461247 - 4461451
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggatta--atatatgacactttaaataaaagctta 98  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||||| |||  || | |||||  ||||||||||    || | ||| ||||    
T  4461247 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggcagcataaacaagattaatatatatgacaacacaattgaaaactta 4461346  T
Q  99 tgtctccctcgaggtttcatttcaa-tgtacactaatcacaacttccagtatcccttgt-aaacctattcaacccaacaataagtctcaagtgagtgtgt 196  Q
    |||||||  | |||||||||| ||| ||||||||||||||| |||| || ||  ||  | |||||||||||||||||||| |||||||||||||||||||    
T  4461347 tgtctcctccaaggtttcattacaagtgtacactaatcacatcttcaagcatttctcatgaaacctattcaacccaacaacaagtctcaagtgagtgtgt 4461446  T
Q  197 gtgtg 201  Q
    |||||    
T  4461447 gtgtg 4461451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 4312767 - 4312564
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| |||| |  |||  || | |||||  |||||||| || || ||||| ||||||    
T  4312767 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcataaacaagattatcatatgacaattcaattaaaa-cttatg 4312669  T
Q  101 tctccctcgagg-tttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaac-ctattcaacccaacaat-aagtctcaagtgagtgtgt 196  Q
    |||||    ||| ||| |||||||  |||||||||||||||  || || ||  ||||||| |  |||||||||||||||| |||| ||||||||||||||    
T  4312668 tctcctcaaaggcttttatttcaagcgtacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagtttcaagtgagtgtgt 4312569  T
Q  197 gtgtg 201  Q
    |||||    
T  4312568 gtgtg 4312564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 9264944 - 9265145
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||| |||| || |||  |  | |||||| |||||||| || ||  |||| ||||||    
T  9264944 aactcccccacacttgaatctttgcttgtcctcaaacaaaaggcataaacatagcagcataagcaagattaacatatgacaattcaataaaaaacttatg 9265043  T
Q  101 tctccctcgagg--tttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaac-ctattcaacccaacaat-aagtctcaagtgagtgtg 195  Q
    ||| |||| | |  ||| |||||||  |||||||||||||||  || |||||  ||||||| |  |||||||||||||||| |||| |||||||||||||    
T  9265044 tct-cctcaaagacttttatttcaagcgtacactaatcacaaactcaagtatttcttgtaatctttattcaacccaacaatcaagtttcaagtgagtgtg 9265142  T
Q  196 tgt 198  Q
    |||    
T  9265143 tgt 9265145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 538760 - 538813
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  538760 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 538813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 8780941 - 8781146
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaat-aaaagcttat 99  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||| |||| || |||  || | |||||| |||||||| || || | |||| |||||    
T  8780941 aactcccccacacttgaatctttgcttgtcctcaaacaaaaggcataaacatagcagcataaacaagattaacatatgacaattcaattaaaaaacttat 8781040  T
Q  100 gtctccctcgagg-tttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaac-ctattcaacccaacaat-aagtctcaagtgagtgtg 195  Q
    ||||||    ||| ||| ||||||| ||||||||||||||||  || || ||  ||||||| |  |||||||||||||||| |||| |||||  ||||||    
T  8781041 gtctcctcaaaggcttttatttcaagtgtacactaatcacaaactcaagcatttcttgtaacctttattcaacccaacaatcaagtttcaaggtagtgtg 8781140  T
Q  196 tgtgtg 201  Q
    ||||||    
T  8781141 tgtgtg 8781146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 9194549 - 9194741
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacact-ttaaataaaagcttat 99  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| | |  ||  ||| || | ||||||||||||||| |   || ||| | ||| |    
T  9194549 aactcccccatacttgaatctttgtttgtcctcaagcaaaaggcataaata-agcaacaaaaacaagattaatatatgacaataacaattaagaactttt 9194647  T
Q  100 gtctccctcgaggtttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagt 192  Q
    |||||| |  ||| || ||||||| ||||||| |||||||||||| || || |||||| || |||||||||||||||| ||||  |||||||||    
T  9194648 gtctcctttaaggctttatttcaagtgtacaccaatcacaacttcaagcattccttgtgaatctattcaacccaacaacaagttccaagtgagt 9194741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23515277 - 23515224
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  23515277 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 23515224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9004162 - 9004111
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  9004162 aactcccccacacttgaatctttgtttgtcctcaagcaaaaggcataaacat 9004111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9583103 - 9583052
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  9583103 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 9583052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14551309 - 14551258
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  14551309 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 14551258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11921312 - 11921365
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| | |||| ||||||    
T  11921312 aactcccccacacttgaatctttgcttgtcctcaagcaaaagtcataaacatgg 11921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12548810 - 12548863
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||    
T  12548810 aactccccaacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 12548863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13658076 - 13658031
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcat 46  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||    
T  13658076 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcat 13658031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8718075 - 8718036
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  8718075 aactcccccacacttgaatctttgcttgtcctcaagcaaa 8718036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16119854 - 16119893
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  16119854 aactcccccacacttgaatctttgcttgtcctcaagcaaa 16119893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16465621 - 16465660
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  16465621 aactcccccacacttgaatctttgcttgtcctcaagcaaa 16465660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 18593357 - 18593408
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  18593357 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 18593408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 18618327 - 18618276
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  18618327 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 18618276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 48801781 - 48801832
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||| ||||    
T  48801781 aactcccccacacttgaatcttttcttgtcctcaagcaaaaggcatacacat 48801832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13674066 - 13674020
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcata 47  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  13674066 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcata 13674020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12567224 - 12567171
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    ||||||||||||||||||| |||| |||||||||||||||  ||||| ||||||    
T  12567224 aactcccccacacttgaatttttgcttgtcctcaagcaaaatgcataaacatgg 12567171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16532306 - 16532253
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||| ||||||||||||| ||||||||||||||| | |||| ||||||    
T  16532306 aactcccccatacttgaatctttgcttgtcctcaagcaaaagacataaacatgg 16532253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16633356 - 16633409
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||| ||||||||||||| ||||||||||||||| | |||| ||||||    
T  16633356 aactcccccatacttgaatctttgcttgtcctcaagcaaaagacataaacatgg 16633409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6713073 - 6713124
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||| | ||||||||||||| ||||||||||||||| |||||| ||||    
T  6713073 aactcccctatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 6713124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 12567071 - 12567020
Alignment:
Q  152 cttgtaaacct-attcaacccaacaat-aagtctcaagtgagtgtgtgtgtg 201  Q
    ||||||||||| ||||||||||||||| |||| |||||||||||||||||||    
T  12567071 cttgtaaaccttattcaacccaacaatcaagtttcaagtgagtgtgtgtgtg 12567020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 20108579 - 20108540
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaa 40  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  20108579 aactcccccacacttgaatcttttattgtcctcaagcaaa 20108540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 201
Target Start/End: Original strand, 538924 - 538964
Alignment:
Q  162 tattcaacccaacaat-aagtctcaagtgagtgtgtgtgtg 201  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  538924 tattcaacccaacaatcaagtttcaagtgagtgtgtgtgtg 538964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 201
Target Start/End: Complemental strand, 20108415 - 20108375
Alignment:
Q  162 tattcaacccaacaat-aagtctcaagtgagtgtgtgtgtg 201  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  20108415 tattcaacccaacaatcaagtttcaagtgagtgtgtgtgtg 20108375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 153; Significance: 3e-81; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 30759660 - 30759860
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||    
T  30759660 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaagaattaatatatgacaatttaaataaaagcttatg 30759759  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||| |||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  30759760 tctcccttgaggtttcatttcaacgtacactaatcacaacttcaagtattccttgtaaacttattcaacccaacaacaaatctcaagtgagtgtgtgtgt 30759859  T
Q  201 g 201  Q
    |    
T  30759860 g 30759860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 25006813 - 25007012
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25006813 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaggattaatatatgacactttaaataaaagcttatg 25006912  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||| |||||||||||||||||||||||||||||| |||||| || || |||||||||| |||||||||| |||| || | ||||||||||||||||||    
T  25006913 tctccttcgaggtttcatttcaatgtacactaatcataacttcaagcattccttgtaaacttattcaacccgacaacaaatttcaagtgagtgtgtgtgt 25007012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 22855774 - 22855572
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaag--gattaatatatgacactttaaataaaagctta 98  Q
    |||||||||||||||||||||||| ||||||||||||||| | |||||||||||| |||||||||   ||||||||||||||| || |||||||||||||    
T  22855774 aactcccccacacttgaatctttgcttgtcctcaagcaaaagacatagacatggcagcaacaaaaaaagattaatatatgacaattcaaataaaagctta 22855675  T
Q  99 tgtctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgt 198  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  22855674 tgtttccctcgaggtttcatttcaatgtacactaatcacaacttcaagtattccttgtaaacttattcaacccaacaacaagtcttaagtgagtgtgtgt 22855575  T
Q  199 gtg 201  Q
    |||    
T  22855574 gtg 22855572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 22317518 - 22317719
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| || |||||||| ||||||    
T  22317518 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaggattaatatatgacaattgaaataaaatcttatg 22317617  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaac-ctattcaacccaacaataagtctcaagtgagtgtgtgtg 199  Q
    ||||  || |||||||||||||||||||||||||||||||||| ||||| |||||| |||  ||||||||||||||| |||||| |||||||||||||||    
T  22317618 tctctttcaaggtttcatttcaatgtacactaatcacaacttcaagtattccttgtgaactttattcaacccaacaacaagtcttaagtgagtgtgtgtg 22317717  T
Q  200 tg 201  Q
    ||    
T  22317718 tg 22317719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 18484217 - 18484416
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||| ||||||||||||||| || |||||||||||||||    
T  18484217 aactccccaacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagcagcaacaaaaagattaatatatgacaattcaaataaaagcttatg 18484316  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    || || ||||||||||||||||||||||||||||||||||||| ||| | |||||| ||| ||||||||||||||| |||||| ||||||||||||||||    
T  18484317 tccccttcgaggtttcatttcaatgtacactaatcacaacttcaagtgttccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgt 18484416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 25116176 - 25116360
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaa--ggattaatatatgacactttaaataaaagctta 98  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||  |||||||||||||||| || |||||||||||||    
T  25116176 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatggacatggcagcaacaaaaaaggattaatatatgacaattcaaataaaagctta 25116275  T
Q  99 tgtctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtct 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||| ||||||    
T  25116276 tgtctccctcgaggtttcatttcaatgtacactaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtct 25116360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 26847854 - 26847652
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaag--gattaatatatgacactttaaataaaagctta 98  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||||||||||| |||||||||   ||||||||||||||| || |||||||||||||    
T  26847854 aactcccccacacttgaatctttgcttgtcctcaaccaaaaggcatagacatggcagcaacaaaaaaagattaatatatgacaattcaaataaaagctta 26847755  T
Q  99 tgtctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgt 198  Q
    ||||| | |||||||||||||||||||||||| ||||||||| || ||||| |||||| ||| ||||||||||||||| |||||| ||||||||||||||    
T  26847754 tgtctgcttcgaggtttcatttcaatgtacaccaatcacaacgtcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgt 26847655  T
Q  199 gtg 201  Q
    |||    
T  26847654 gtg 26847652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 25175266 - 25175451
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaag-ggcatagacatggccgcaacaaaa--ggattaatatatgacactttaaataaaagctt 97  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||| |||||||| |||||||||  |||||||||||||||| || ||||||||||||    
T  25175266 aactcccccacacttgaatctttgcttgtcctcaagcaaaaaggcatggacatggcagcaacaaaaaaggattaatatatgacaattcaaataaaagctt 25175365  T
Q  98 atgtctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtct 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||| ||||||    
T  25175366 atgtctccctcgaggtttcatttcaatgtacactaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtct 25175451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15735744 - 15735693
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  15735744 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 15735693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 20595836 - 20595887
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  20595836 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 20595887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 20602122 - 20602173
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  20602122 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 20602173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 20608413 - 20608464
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  20608413 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 20608464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 24219956 - 24219752
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgca-acaaaaggattaatatatgacactttaaataaaagcttat 99  Q
    ||||||||||||||||| |||||| ||||||||||||||| |||||| ||||||  ||| | || |  ||||  |||||||| ||||| ||||| |  ||    
T  24219956 aactcccccacacttgagtctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaacaatattatcatatgacaatttaattaaaa-cacat 24219858  T
Q  100 gtctccctcgagg--tttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaacc-tattcaacccaacaat-aagtctcaagtgagtgt 194  Q
    |||| |||| |||  ||  |||||||  |||||||||||||||  || || ||  |||||||||| |||||||||||||||| |||| ||||||||||||    
T  24219857 gtct-cctcaagggcttcaatttcaagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtgagtgt 24219759  T
Q  195 gtgtgtg 201  Q
    |||||||    
T  24219758 gtgtgtg 24219752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20444844 - 20444890
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcata 47  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  20444844 aactcccccacacttgaatctttgattgtcctcaagcaaaaggcata 20444890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 23600644 - 23600694
Alignment:
Q  4 tcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  23600644 tcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 23600694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 18073110 - 18073059
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  18073110 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 18073059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 20790719 - 20790770
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  20790719 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 20790770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 20916461 - 20916512
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||| |||| ||||| |||||||||||||||||||| |||||||||||    
T  20916461 aactcccctacacatgaatttttggttgtcctcaagcaaaaggcatagacat 20916512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 23748261 - 23748210
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  23748261 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 23748210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 24940744 - 24940693
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  24940744 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 24940693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 23600767 - 23600845
Alignment:
Q  125 gtacactaatcacaacttccagtatcccttgtaaacct-attcaacccaacaat-aagtctcaagtgagtgtgtgtgtg 201  Q
    |||||||||||||||  || || ||  ||||||||||| ||||||||||||||| |||| |||||||||||||||||||    
T  23600767 gtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtgagtgtgtgtgtg 23600845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 21387600 - 21387565
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaag 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  21387600 aactcccccacacttgaatctttgcttgtcctcaag 21387565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24953179 - 24953218
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaa 40  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  24953179 aactcccccatacttgaatctttgcttgtcctcaagcaaa 24953218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 27270603 - 27270564
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaa 40  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  27270603 aactcccccacacttgaatcattgcttgtcctcaagcaaa 27270564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 20444970 - 20445048
Alignment:
Q  125 gtacactaatcacaacttccagtatcccttgtaaacct-attcaacccaacaat-aagtctcaagtgagtgtgtgtgtg 201  Q
    |||||||||||||||  || || ||  ||||||||| | ||||||||||||||| |||| |||||||||||||||||||    
T  20444970 gtacactaatcacaaactcaagcatttcttgtaaactttattcaacccaacaatcaagtttcaagtgagtgtgtgtgtg 20445048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 4e-80; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 15260114 - 15260312
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15260114 aactcccccacacttgaatctttgcttttcctcaagcaaaaggcatagacatggcagcaacaaaaggattaatatatgacactttaaataaaagcttatg 15260213  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtg 199  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| |||||||||| |||| || | |||||||||||||||||    
T  15260214 tctccctcgaggtttcatttcaatgtacactaatcacaacttcaagcattccttgtaaacttattcaacccgacaacaaatttcaagtgagtgtgtgtg 15260312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 10650598 - 10650398
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10650598 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaggattaatatatgacactttaaataaaagcttatg 10650499  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||| | |||||||| ||||||||||||||| || ||| |||||||||| |||||    
T  10650498 tctccctcgaggtttcatttcaacgtacactaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaaatcttaagtgagtgtatgtgt 10650399  T
Q  201 g 201  Q
    |    
T  10650398 g 10650398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 14654003 - 14654203
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||| ||||||||||||||| || |||||||||||||||    
T  14654003 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagcagcaacaaaaagattaatatatgacaattcaaataaaagcttatg 14654102  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||| |||||| ||||||||||||||||    
T  14654103 tctccttcgaggtttcatttcaatgtacactaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgt 14654202  T
Q  201 g 201  Q
    |    
T  14654203 g 14654203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 16682964 - 16682762
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaa--ggattaatatatgacactttaaataaaagctta 98  Q
    |||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| |||||||||  |||||||||||||||| || |||||||||||||    
T  16682964 aactcccccacacttgaatctttgcttgtcatcaagcaaaaggcatagacatggcagcaacaaaaaaggattaatatatgacaattcaaataaaagctta 16682865  T
Q  99 tgtctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||| ||||| |||||| ||||||||||||||    
T  16682864 tgtctccctcgaggtttcatttcaatgtacactaatcacaacttcaagtattccttgtaaacttattcaaccaaacaacaagtcttaagtgagtgtgtgt 16682765  T
Q  199 gtg 201  Q
    |||    
T  16682764 gtg 16682762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 15409580 - 15409380
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||||||||| | || ||||||||| ||||||||||||||| || |||||||||||||||    
T  15409580 aactcccccacactagaatctttgcttgtcctcaagcaaaaggcatagacgtagcagcaacaaaaagattaatatatgacaattcaaataaaagcttatg 15409481  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    |||||||  |||||||||||||||||||||||||||| ||||| ||||| | |||| |||| |||||||||||||| |||| ||||||||||||||||||    
T  15409480 tctcccttaaggtttcatttcaatgtacactaatcacgacttcaagtattcgttgtgaaccaattcaacccaacaacaagtttcaagtgagtgtgtgtgt 15409381  T
Q  201 g 201  Q
    |    
T  15409380 g 15409380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 15865698 - 15865498
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| || | ||||||| ||||||||||||||| || |||||||||||||||    
T  15865698 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacattgcagtaacaaaaagattaatatatgacaattcaaataaaagcttatg 15865599  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    || || ||||| ||||||||||||||||||||||||||||||| ||||| |||||| |||  |||||||||||||| |||||| |||||| |||||||||    
T  15865598 tccccttcgagatttcatttcaatgtacactaatcacaacttcaagtattccttgtgaactcattcaacccaacaacaagtcttaagtgaatgtgtgtgt 15865499  T
Q  201 g 201  Q
    |    
T  15865498 g 15865498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 9489009 - 9489082
Alignment:
Q  125 gtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgt 198  Q
    ||||||||| ||||||||| |||||  ||  | ||||||||||||||||||| |||||||||||||||||||||    
T  9489009 gtacactaaacacaacttcaagtatttctcatgaacctattcaacccaacaacaagtctcaagtgagtgtgtgt 9489082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10630960 - 10630907
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  10630960 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 10630907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15254558 - 15254509
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagac 50  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  15254558 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagac 15254509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18081464 - 18081517
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  18081464 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 18081517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 56580544 - 56580597
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  56580544 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 56580597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 12515118 - 12515042
Alignment:
Q  125 gtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgtg 201  Q
    |||||||| |||||||||| |||||  ||  | ||||||||||||||||||| |||| |||||||||||||||||||    
T  12515118 gtacactagtcacaacttcaagtatttctcatgaacctattcaacccaacaacaagtttcaagtgagtgtgtgtgtg 12515042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 17484915 - 17485118
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgca-acaaaaggattaatatatgacactttaaataaaagcttat 99  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| | ||||  ||| | || | |||||  | |||||| ||||| ||||| |||||    
T  17484915 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaatatggtagcataaaacaagattatcacatgacaatttaattaaaa-cttat 17485013  T
Q  100 gtctcc-ctcgaggtttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaacc-tattcaacccaacaat-aagtctcaagtgagtgtg 195  Q
    |||||| |  | | ||| |||||||  |||||||||||||||  || || ||  ||| ||| || |||||||||||||||| |||| |||||||||||||    
T  17485014 gtctcctcaggggcttttatttcaagcgtacactaatcacaaactcaagcatttcttataatccttattcaacccaacaatcaagtttcaagtgagtgtg 17485113  T
Q  196 tgtgt 200  Q
    |||||    
T  17485114 tgtgt 17485118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 11496619 - 11496670
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  11496619 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 11496670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 13823123 - 13823072
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  13823123 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 13823072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 42709736 - 42709787
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  42709736 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 42709787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38426933 - 38426887
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcata 47  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  38426933 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 38426887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 3354850 - 3354646
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaa-aggattaatatatgacactttaaataaaagcttat 99  Q
    |||||||||||||||||||  ||| ||||||||||||||| |||||| ||||||  |||  ||| |  ||||  |||||||| ||||| ||||| |  ||    
T  3354850 aactcccccacacttgaatagttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaacaatattatcatatgacaatttaattaaaa-cacat 3354752  T
Q  100 gtctccctcgagg--tttcatttcaat-gtacactaatcacaacttccagtatcccttgtaaacct-attcaacccaacaat-aagtctcaagtgagtgt 194  Q
    |||||| || |||  ||  |||||||  |||||||||||||||  || || ||  ||||||||||| ||||||||||||||| |||| ||||||||||||    
T  3354751 gtctcc-tcaagggcttcaatttcaagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtgagtgt 3354653  T
Q  195 gtgtgtg 201  Q
    |||||||    
T  3354652 gtgtgtg 3354646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 10630835 - 10630758
Alignment:
Q  125 gtacactaatcacaacttccagtatcccttgtaaacct-attcaacccaacaat-aagtctcaagtgagtgtgtgtgt 200  Q
    |||||||||||||||  || || ||  ||||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  10630835 gtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtgagtgtgtgtgt 10630758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18292148 - 18292095
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| |||||| |||| ||| |||||| ||||||    
T  18292148 aactcccccacacttgaatctttgcttgtccacaagaaaaaggcataaacatgg 18292095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45234237 - 45234290
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||| ||||||||||||| ||||||||||| ||| |||||| ||||||    
T  45234237 aactcccccagacttgaatctttgcttgtcctcaagtaaaaggcataaacatgg 45234290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9488883 - 9488928
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcat 46  Q
    |||||||||| |||| |||||||| ||||||||||||||| |||||    
T  9488883 aactcccccatacttcaatctttgcttgtcctcaagcaaaaggcat 9488928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 18292022 - 18291945
Alignment:
Q  125 gtacactaatcacaacttccagtatcccttgtaaacct-attcaacccaacaat-aagtctcaagtgagtgtgtgtgt 200  Q
    |||||||||||||||  || || ||  ||||||||||| ||||||||||||||| |||| ||||||||| ||||||||    
T  18292022 gtacactaatcacaaagtcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtgagcgtgtgtgt 18291945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 38426822 - 38426745
Alignment:
Q  125 gtacactaatcacaacttccagtatcccttgtaaacct-attcaacccaacaat-aagtctcaagtgagtgtgtgtgt 200  Q
    |||||||||||||||  || || ||  ||||||||||| |||||| |||||||| |||| ||||||||||||||||||    
T  38426822 gtacactaatcacaaactcaagcatttcttgtaaaccttattcaagccaacaatcaagtttcaagtgagtgtgtgtgt 38426745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17296254 - 17296298
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggca 45  Q
    ||||||||||  |||||||||||| ||||||||||||||| ||||    
T  17296254 aactcccccatgcttgaatctttgcttgtcctcaagcaaaaggca 17296298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 50511 - 50711
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||| ||||||||||||||| || |||||||||||||||    
T  50511 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagcagcaacaaaaagattaatatatgacaattcaaataaaagcttatg 50610  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||| |||||| ||||||||||||||||    
T  50611 tctccctcgaggtttcatttcaatgtacactaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgt 50710  T
Q  201 g 201  Q
    |    
T  50711 g 50711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 134; Significance: 6e-70; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 2813 - 2612
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||| || |||||||||||||||    
T  2813 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaagattaatatatgacaattcaaataaaagcttatg 2714  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaac-ctattcaacccaacaataagtctcaagtgagtgtgtgtg 199  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||| |||||| |||  ||||||||||||||| | |||| |||||||||||||||    
T  2713 tctccttcaaggtttcatttcaatgtacactaatcacaacttcaagtattccttgtgaactttattcaacccaacaacatgtcttaagtgagtgtgtgtg 2614  T
Q  200 tg 201  Q
    ||    
T  2613 tg 2612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 42295 - 42095
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||| ||||||||||||||| || ||||||||| |||||    
T  42295 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagcagcaacaaaaagattaatatatgacaattcaaataaaaggttatg 42196  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||| | |||||||| |||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||| |||||| ||||||||||||||||    
T  42195 tctcctttgaggtttcgtttcaatgtacactaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgt 42096  T
Q  201 g 201  Q
    |    
T  42095 g 42095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 132; Significance: 9e-69; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 54854 - 55056
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaa--ggattaatatatgacactttaaataaaagctta 98  Q
    ||||||||||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||  |||||||||||||||| || |||||||||||||    
T  54854 aactcccccacgcttgaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaaaggattaatatatgacaattcaaataaaagctta 54953  T
Q  99 tgtctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgt 198  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||| ||| ||||||||||||||| |||| | |||||||||| |||    
T  54954 tgtctccctcgaggtttcatttcaatgtacattaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagttttaagtgagtgtatgt 55053  T
Q  199 gtg 201  Q
    |||    
T  55054 gtg 55056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 10771 - 10570
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaa-ggattaatatatgacactttaaataaaagcttat 99  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||    
T  10771 aactcccccacactttaatctttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaaggattaatatatgacaatttaaataaaagcttat 10672  T
Q  100 gtctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtg 199  Q
    |||||||||||||  | ||||||||| |||||||||  |||||| ||||| |||||||||| ||||||||||||||| || |||||||||||||||||||    
T  10671 gtctccctcgaggacttatttcaatgcacactaatcgtaacttcaagtattccttgtaaacttattcaacccaacaacaaatctcaagtgagtgtgtgtg 10572  T
Q  200 tg 201  Q
    ||    
T  10571 tg 10570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 5290 - 5090
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| || |||| ||||    ||| |||||||| || |||||||||||||||    
T  5290 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagcagcaataaaaaagataacatatgacaattcaaataaaagcttatg 5191  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    |||||    |||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5190 tctcctctaaggtttcatttcaatgtacactaatcacaacttcaagtattccttgtgaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 5091  T
Q  201 g 201  Q
    |    
T  5090 g 5090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 22160 - 22360
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||| ||||||||||||||| || || ||||||||||||    
T  22160 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagcagcaacaaaaagattaatatatgacaattcaagtaaaagcttatg 22259  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    || || |  |||||| ||||||||||||||||||||||||||| ||||| | |||||||| ||||||||||||||| |||||| ||||||||||||||||    
T  22260 tcccctttaaggttttatttcaatgtacactaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgt 22359  T
Q  201 g 201  Q
    |    
T  22360 g 22360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 8e-60; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 21784477 - 21784677
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||||||||| || ||||||||| ||||||||||||||| ||||||||||||||||||    
T  21784477 aactcccccacacttgaatatttgcttgtcctcaagcaaaaggcatagacatagcagcaacaaaaagattaatatatgacaatttaaataaaagcttatg 21784576  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaac-ctattcaacccaacaataagtctcaagtgagtgtgtgtg 199  Q
    ||    || |||||||||||||||||||||||||||||||||| |||||  ||||| |||  ||||||||||||||| |||||| |||||||||||||||    
T  21784577 tccatttcaaggtttcatttcaatgtacactaatcacaacttcaagtatttcttgtgaactttattcaacccaacaacaagtcttaagtgagtgtgtgtg 21784676  T
Q  200 t 200  Q
    |    
T  21784677 t 21784677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 8947520 - 8947719
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||  ||||||||||| ||| | ||||||||| || |||| |||| ||||||||||||||| || |||||||| ||||||    
T  8947520 aactcccccacacttgaatctttacttgtcctcaaggaaaagacatagacatagcagcaataaaaagattaatatatgacaattcaaataaaaacttatg 8947619  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    |||||    ||| |||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  8947620 tctcctctaaggcttcatttcaatgtacactaatcacaacttcaagtattccttgtgaacctattcaacccaacaacaagtctcaagtgagcgtgtgtgt 8947719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 4027890 - 4027693
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    ||||||||||| |||||||||||| || |||||||||||| ||||||||||| || |||| |||| |||||| |||||||| || |||||||| ||||||    
T  4027890 aactcccccacccttgaatctttgcttttcctcaagcaaaaggcatagacatagcagcaataaaaagattaacatatgacaattcaaataaaaacttatg 4027791  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgt 198  Q
    |||||    ||  |||||||||||||||||||||||||||| | ||||| |||||| ||||||||||||||||||| |||||||||||||||||||||    
T  4027790 tctcctctaagacttcatttcaatgtacactaatcacaactccaagtattccttgtgaacctattcaacccaacaacaagtctcaagtgagtgtgtgt 4027693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 19875649 - 19875854
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggc---cgcaacaaaaggattaatatatgacactttaaataaaagctt 97  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| |||| ||      || || | ||||||||||||||| || || | ||| |||    
T  19875649 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagcaaaactaaaaacaagattaatatatgacaattcaattgaaaactt 19875748  T
Q  98 atgtctccctcgagg-tttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtg 195  Q
    ||||||||    ||| ||| ||||||| ||||||||||| |||||||| || || |||||  ||||||||||||||||||| |||||  || ||||||||    
T  19875749 atgtctcctcaaaggcttttatttcaagtgtacactaataacaacttcaagcattccttgcgaacctattcaacccaacaacaagtccgaaatgagtgtg 19875848  T
Q  196 tgtgtg 201  Q
    ||||||    
T  19875849 tgtgtg 19875854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 16382706 - 16382782
Alignment:
Q  125 gtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgtg 201  Q
    ||||||||||||||||||| || ||| || || |||| |||||||||||||| ||||||||||||||||||||||||    
T  16382706 gtacactaatcacaacttcaagcatctctcgtgaaccgattcaacccaacaacaagtctcaagtgagtgtgtgtgtg 16382782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 8653326 - 8653275
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  8653326 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 8653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17094606 - 17094657
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  17094606 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 17094657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 19364239 - 19364188
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||||||||    
T  19364239 aactcccccacacttgaatctttgcttgtcctcaagcaaaatgcatagacat 19364188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 27047084 - 27047033
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  27047084 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 27047033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20237666 - 20237620
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcata 47  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  20237666 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 20237620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 52938626 - 52938672
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcata 47  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  52938626 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 52938672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3990149 - 3990096
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||||    
T  3990149 aactcccccatacttgaatctttgtttgtcctcaagcaaaaggcataaacatgg 3990096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14070715 - 14070664
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  14070715 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 14070664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21798667 - 21798718
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  21798667 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 21798718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16382580 - 16382619
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaa 40  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  16382580 aactcccccatacttgaatctttgcttgtcctcaagcaaa 16382619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 114; Significance: 5e-58; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 37751 - 37948
Alignment:
Q  4 tcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatgtct 103  Q
    ||||||||||||||||||||| ||||||||||||||| || |||||||| || ||||||||| ||||||||||||||| |||||||||||| |||||||     
T  37751 tcccccacacttgaatctttgcttgtcctcaagcaaaaggaatagacatagcagcaacaaaaagattaatatatgacaatttaaataaaagtttatgtcc 37850  T
Q  104 ccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaac-ctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    |  ||||||||| ||||||||||||||||||||||||||| ||||| |||||| |||  ||||||||||||||  |||||| ||||||||||||||||    
T  37851 ctttcgaggtttaatttcaatgtacactaatcacaacttcaagtattccttgtgaactttattcaacccaacatcaagtcttaagtgagtgtgtgtgt 37948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 8e-57; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 18731926 - 18731727
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||| ||||||||||||||| | ||||||||||||||| ||||||||||| || |||| |||| |||||| ||| |||| || |||||||||||||||    
T  18731926 aactcctccacacttgaatcttagcttgtcctcaagcaaaaggcatagacatagcagcaataaaaagattaacataagacaattcaaataaaagcttatg 18731827  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    |||||    ||||||||||||| |||||||||||||||||||| ||||| |||||| |||||||||| |||||||| |||||||||||||||||||||||    
T  18731826 tctcctctaaggtttcatttcattgtacactaatcacaacttcaagtattccttgtgaacctattcagcccaacaacaagtctcaagtgagtgtgtgtgt 18731727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 11204055 - 11203856
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    ||||||||||||||| ||| |||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||  || |||||||| |||||    
T  11204055 aactcccccacacttaaatatttgcttgtcctcaagcaaaaggcatagacatggcagcaacaaaaggattaatatatgaca-attcaataaaagtttatg 11203957  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaac-ctattcaacccaacaataagtctcaagtgagtgtgtgtg 199  Q
    ||| ||| |||||||||||||||||||||||| ||| |||||| ||||| |||||| |||  ||||||||||||||| |||||| |||||||||||||||    
T  11203956 tct-ccttgaggtttcatttcaatgtacactattcaaaacttcaagtattccttgtgaactttattcaacccaacaacaagtcttaagtgagtgtgtgtg 11203858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 35270927 - 35270850
Alignment:
Q  124 tgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgtg 201  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  35270927 tgtacactaatcacaacttcaagtattccttgtaaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgtg 35270850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 35271019 - 35270927
Alignment:
Q  5 cccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagctt 97  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||  |   ||||||| ||||||||||||||| || ||||||||||||    
T  35271019 cccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacataacaaaaacaaaaagattaatatatgacaattcaaataaaagctt 35270927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 20107785 - 20107989
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| |||| |  |||  || | ||| || |||||||| || || | ||| ||||||    
T  20107785 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagtagcataaacaagataaacatatgacaattcaattgaaaacttatg 20107884  T
Q  101 tctccctcgagg-tttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaac-ctattcaacccaacaat-aagtctcaagtgagtgtgt 196  Q
    |||||    ||| |||||||||||  |||||||||||||||  || || ||  ||||||| |  |||||||||||||||| |||| ||||||||||||||    
T  20107885 tctcctcaaaggctttcatttcaagcgtacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagtttcaagtgagtgtgt 20107984  T
Q  197 gtgtg 201  Q
    |||||    
T  20107985 gtgtg 20107989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25963452 - 25963401
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  25963452 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 25963401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25968099 - 25968048
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  25968099 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 25968048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 30671812 - 30671863
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  30671812 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacat 30671863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2181264 - 2181211
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  2181264 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 2181211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15699765 - 15699714
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  15699765 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 15699714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 22165554 - 22165605
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  22165554 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 22165605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22244022 - 22243971
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  22244022 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 22243971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18448344 - 18448298
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcata 47  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  18448344 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcata 18448298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 29686527 - 29686449
Alignment:
Q  124 tgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaat-aagtctcaagtgagtgtgtgtgtg 201  Q
    ||||||||||||||||||||  | ||  ||  | |||||||||||||||||||| ||||||||||||||||||||||||    
T  29686527 tgtacactaatcacaacttcaggcatttctcatgaacctattcaacccaacaatcaagtctcaagtgagtgtgtgtgtg 29686449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18184879 - 18184932
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||||    
T  18184879 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 18184932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21560559 - 21560612
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||||    
T  21560559 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 21560612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 25625894 - 25625691
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||| |||||||| |||| ||||||||||||||| ||  || ||||||  |||  || |  ||||  |||||||| ||||| ||||| | ||||    
T  25625894 aactcccccatacttgaatttttgcttgtcctcaagcaaaaggtgtaaacatggtagcataaacaatattatcatatgacaatttaattaaaa-catatg 25625796  T
Q  101 tctccctcgagg-tttcatttcaat-gtacactaatcacaacttccagtatcccttgtaaacct-attcaacccaacaat-aagtctcaagtgagtgtgt 196  Q
    ||||| |   || ||| |||||||  |||||||||||||||  || || ||  ||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  25625795 tctccttaagggctttaatttcaagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtgagtgtgt 25625696  T
Q  197 gtgtg 201  Q
    |||||    
T  25625695 gtgtg 25625691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 20170453 - 20170402
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  20170453 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 20170402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 22061508 - 22061559
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  22061508 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 22061559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 22767121 - 22767172
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  22767121 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 22767172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 23023297 - 23023258
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  23023297 aactcccccacacttgaatctttgcttgtcctcaagcaaa 23023258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24855250 - 24855301
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  24855250 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacat 24855301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29595899 - 29595846
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    ||||||| |||||||||||||||| |||||||||||||||  ||||| ||||||    
T  29595899 aactccctcacacttgaatctttgcttgtcctcaagcaaaaagcataaacatgg 29595846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23517836 - 23517887
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| || |||||||||||| |||||| ||||    
T  23517836 aactcccccatacttgaatctttgcttatcctcaagcaaaaggcatacacat 23517887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18854221 - 18854175
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcata 47  Q
    |||||||||| ||||||||||||  ||||||||||||||| ||||||    
T  18854221 aactcccccatacttgaatcttttcttgtcctcaagcaaaaggcata 18854175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 23023171 - 23023093
Alignment:
Q  125 gtacactaatcacaacttccagtatcccttgtaaacct-attcaacccaacaat-aagtctcaagtgagtgtgtgtgtg 201  Q
    |||||||||||||||  || || ||  ||||||||||| ||||||||||||||| |||| ||||||||||||| |||||    
T  23023171 gtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtgagtgtgcgtgtg 23023093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 25631274 - 25631477
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaa-aggattaatatatgacactttaaataaaagcttat 99  Q
    |||||||||||||||||||||||| ||||||||| | |||  ||||| ||||||  |||| ||| | ||||| ||||||||| || || ||||| |||||    
T  25631274 aactcccccacacttgaatctttgcttgtcctcaggaaaaatgcataaacatggtagcaataaacaagatta-tatatgacaattcaattaaaa-cttat 25631371  T
Q  100 gtctccctcgagg-tttcatttcaat-gtacactaatcacaacttccagtatcccttgtaaacct-attcaacccaacaat-aagtctcaagtgagtgtg 195  Q
     ||||     ||| ||| |||||||  |||||||||||||||  || || ||  ||||||| | | ||||||||||||||| |||| |||||||||||||    
T  25631372 atctcttcaaaggctttaatttcaagcgtacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagtttcaagtgagtgtg 25631471  T
Q  196 tgtgtg 201  Q
    ||||||    
T  25631472 tgtgtg 25631477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 109; Significance: 5e-55; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 162053 - 161854
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| || |||| |||| ||| || |||||||| || ||| |||||||||||    
T  162053 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagcagcaataaaaagat-aacatatgacaattcaaacaaaagcttatg 161955  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    |||||    || ||||||||||||||||||||||||||| ||| ||||| |||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  161954 tctcctctaagctttcatttcaatgtacactaatcacaatttcaagtattccttgtgaacctattcaacccaacaacaagtctcaagtaagtgtgtgtgt 161855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 172312 - 172111
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| |||| || |||  || | |||| | |||||||| |  || ||||| ||||||    
T  172312 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatagcagcataaacacgatttacatatgacaataaaattaaaaacttatg 172213  T
Q  101 tctccctcgaggtttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtg 199  Q
    | |||    ||| |||||||||| |||||| |||||| |||||| || || |||| | ||||||||||||||||||| || |||||||||||||||||||    
T  172212 tatcctctaaggcttcatttcaagtgtacattaatcataacttcaagcattccttatgaacctattcaacccaacaacaactctcaagtgagtgtgtgtg 172113  T
Q  200 tg 201  Q
    ||    
T  172112 tg 172111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 164408 - 164461
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| || |||||||||||| |||||| ||||||    
T  164408 aactcccccacacttgaatctttgcttatcctcaagcaaaaggcataaacatgg 164461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 965 - 766
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| || | ||  ||| ||||||||||||||| || |||||||||||||||    
T  965 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacatagcagtaattaaaagattaatatatgacaattcaaataaaagcttatg 866  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    |  || | ||||||||||||||||||| ||||||||||||||| ||||| |||||| ||| |||||||| ||| || |||||| ||||||||||||||||    
T  865 ttccctttgaggtttcatttcaatgtaaactaatcacaacttcaagtattccttgtgaacttattcaactcaaaaacaagtcttaagtgagtgtgtgtgt 766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 72577 - 72777
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||  || |||||||||||| ||||| ||| | || ||||||||| ||||||||||||||| || |||| |||| |||||    
T  72577 aactcccccacacttgaatctttacttttcctcaagcaaaaggcattgacgtagcagcaacaaaaagattaatatatgacaattcaaatgaaagtttatg 72676  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    |||||||  |||||||||||||| |||||||||||||||||||  |||| |||||| ||||||||||||||||||| || |||  |||||||||||||||    
T  72677 tctcccttaaggtttcatttcaacgtacactaatcacaacttcatgtattccttgtgaacctattcaacccaacaacaaatcttgagtgagtgtgtgtgt 72776  T
Q  201 g 201  Q
    |    
T  72777 g 72777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 84767 - 84967
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||  || |||||||||||| ||||| ||| | || ||||||||| ||||||||||||||| || |||| |||| |||||    
T  84767 aactcccccacacttgaatctttacttttcctcaagcaaaaggcattgacgtagcagcaacaaaaagattaatatatgacaattcaaatgaaagtttatg 84866  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    |||||||  |||||||||||||| |||||||||||||||||||  |||| |||||| ||||||||||||||||||| || |||  |||||||||||||||    
T  84867 tctcccttaaggtttcatttcaacgtacactaatcacaacttcatgtattccttgtgaacctattcaacccaacaacaaatcttgagtgagtgtgtgtgt 84966  T
Q  201 g 201  Q
    |    
T  84967 g 84967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 22813 - 22614
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||| || |||| || | ||||||||||||||| ||||| | ||| ||||||    
T  22813 aactcccccacacttgaatctttgcttgtcctcaagcaaagg-catagacatagcagcaaaaataagattaatatatgacaatttaattgaaaacttatg 22715  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    |||||    ||| || ||||||||||||||| ||||||||| | ||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  22714 tctcctctaaggctttatttcaatgtacacttatcacaactccaagtattccttgtgaacctattcaacccaacaataagtctcaagtgagtgtgtttgt 22615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 18258 - 18127
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaag-ggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttat 99  Q
    |||||||||||||||||||||||| ||||||||||| |||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  18258 aactcccccacacttgaatctttgcttgtcctcaagaaaaaaggcatagacatggcagcaacaaaaggattaatatatgacactttaaataaaagcatat 18159  T
Q  100 gtctccctcgaggtttcatttcaatgtacact 131  Q
    ||||| ||||||||||||||||||||||||||    
T  18158 gtctctctcgaggtttcatttcaatgtacact 18127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 12789 - 12587
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaa--aggattaatatatgacactttaaataaaagctta 98  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||| | || |||| |||  | ||||||||||||||| || || ||||| ||||    
T  12789 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcatagacttagcagcaataaagaaagattaatatatgacaattcaattaaaaactta 12690  T
Q  99 tgtctcc-ctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtg 197  Q
    ||||||| ||  || |||  ||||||||||||||||||| |||| | ||||| |||||| |||||||||||| |||||| ||||||||||||||||||||    
T  12689 tgtctcctctaaagctttg-tttcaatgtacactaatcataactccaagtattccttgtgaacctattcaactcaacaacaagtctcaagtgagtgtgtg 12591  T
Q  198 tgtg 201  Q
    ||||    
T  12590 tgtg 12587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 45233 - 45408
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    ||||||||||||| |||||||||| |||| |||||||||| | ||||||||| || ||||||||| ||||||   |||||| || |||||||||||||||    
T  45233 aactcccccacacctgaatctttgcttgttctcaagcaaaagacatagacatagcagcaacaaaaagattaacgcatgacaattcaaataaaagcttatg 45332  T
Q  101 tctccctcgaggtttcatttcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaa 176  Q
    |||||    ||||||||||||||| |||||||||||||||||| ||||  ||| || |||||||||||||||||||    
T  45333 tctcctctaaggtttcatttcaatttacactaatcacaacttcaagtaatcctcgtgaacctattcaacccaacaa 45408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 37921 - 37722
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaaaggattaatatatgacactttaaataaaagcttatg 100  Q
    |||||||||||||||||||||||  ||| ||||||||||| | |||| |||| ||  ||  || |  ||||| |||||||| || || ||||| ||||||    
T  37921 aactcccccacacttgaatcttttcttgccctcaagcaaaagccataaacatagcaacataaacaaaattaaaatatgacaattcaattaaaatcttatg 37822  T
Q  101 tctccctcgaggtttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtg 199  Q
    |||||    ||| || ||||||| ||||||||||||||||| || ||||| |||||  ||||||||||||||||||| |||| |||||||||||||||||    
T  37821 tctcctcaaaggcttaatttcaagtgtacactaatcacaacatcaagtattccttgcgaacctattcaacccaacaacaagtttcaagtgagtgtgtgtg 37722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1225 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold1225
Description:

Target: scaffold1225; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 1897 - 1694
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgcaacaaa-aggattaatatatgacactttaaataaaagcttat 99  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||| | || || |||  ||  | ||||||||||||||| |   | ||||  |||||    
T  1897 aactcccccacacttgaatctttgattgttctcaagcaaaaggcataaatatagcagcataaaccaagattaatatatgacaatacgattaaatacttat 1798  T
Q  100 gtctccctcgaggtttcatttcaa-tgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgt 198  Q
    ||||||    |||||| ||||||| ||||||||||||| |||||| || || |||||| | ||||||||| ||||||| |||| |||||| |||||||||    
T  1797 gtctcctcaaaggttttatttcaagtgtacactaatcataacttcaagcattccttgtgatcctattcaatccaacaacaagtttcaagtaagtgtgtgt 1698  T
Q  199 gtga 202  Q
    ||||    
T  1697 gtga 1694  T

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Target: scaffold0974 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1313 - 1260
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  1313 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 1260  T

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Target: scaffold0582 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8864 - 8811
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  8864 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 8811  T

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Target: scaffold0156 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1036 - 983
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  1036 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 983  T

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Target: scaffold0020 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 121157 - 121104
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  121157 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 121104  T

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Target: scaffold0157 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 5793 - 5869
Alignment:
Q  125 gtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgtg 201  Q
    |||||||| |||||||||| |||||  ||  | ||||||||||||||||||| |||| |||||||||||||||||||    
T  5793 gtacactagtcacaacttcaagtatttctcatgaacctattcaacccaacaacaagtttcaagtgagtgtgtgtgtg 5869  T

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Target: scaffold0230 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15888 - 15837
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  15888 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 15837  T

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Target: scaffold0029 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 123579 - 123528
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  123579 aactcccccacacttgaatctttgcttgtcctcaagcaaaaggcataaacat 123528  T

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Target: scaffold0506 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2292 - 2345
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||||    
T  2292 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 2345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10211 - 10264
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||||    
T  10211 aactcccccaaacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 10264  T

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Target: scaffold0162 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35109 - 35162
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||| ||||||    
T  35109 aactcccccacacttgaatctttccttgtcctcaagcaaaaggcataaacatgg 35162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 423 - 370
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||||    
T  423 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 370  T

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Target: scaffold0113; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 201
Target Start/End: Complemental strand, 260 - 220
Alignment:
Q  162 tattcaacccaacaat-aagtctcaagtgagtgtgtgtgtg 201  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  260 tattcaacccaacaatcaagtttcaagtgagtgtgtgtgtg 220  T

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Target: scaffold0096 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38513 - 38566
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||| ||||||    
T  38513 aactcccccacacttgaatctttgcttgtcctcaagcaaaaagcataaacatgg 38566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 58633 - 58686
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||| ||||||    
T  58633 aactcccccacacttgaatctttgcttgtcctcaagtaaaaggcataaacatgg 58686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 97731 - 97784
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||    
T  97731 aactcccccacacttgaatctttgcttgtcctaaagcaaaaggcataaacatgg 97784  T

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Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11259 - 11206
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| ||||||    
T  11259 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcataaacatgg 11206  T

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Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 251875 - 251928
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||| ||||||    
T  251875 aactcccccacacttgaatctttacttgtcctcaagcaaatggcataaacatgg 251928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 30578 - 30498
Alignment:
Q  120 tcaatgtacactaatcacaacttccagtatcccttgtaaacctattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||| |||||||||||||||| || || | |||||||| | ||||||||||||| || ||| |||||||||| |||||    
T  30578 tcaatgttcactaatcacaacttcaagcattctttgtaaactttttcaacccaacaacaaatcttaagtgagtgtttgtgt 30498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0773 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 682 - 643
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  682 aactcccccacacttgaatctttgcttgtcctcaagcaaa 643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 12606 - 12555
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||| ||||    
T  12606 aactcccccacacttgaatctttgcttgtcctcaagaaaaaggcataaacat 12555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 232792 - 232843
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||| ||||    
T  232792 aactcccccacacttgaatctttgcttgtcctcaagaaaaaggcataaacat 232843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 2857 - 3058
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatggccgca-acaaaaggattaatatatgacactttaaataaaagcttat 99  Q
    ||||||| || ||||||||||||| ||||||||||||||| |||||| ||||||  ||| | || |  ||||  |||||||| ||||| ||||| |  ||    
T  2857 aactcccacatacttgaatctttgcttgtcctcaagcaaaaggcataaacatggtagcacaaaacaatattatcatatgacaatttaattaaaa-cacat 2955  T
Q  100 gtctccct-cgaggtttcatttca-atgtacactaatcacaacttccagtatcccttgtaaacc-tattcaacccaacaat-aagtctcaagtgagtgtg 195  Q
    |||||| |  | | ||| ||||||  ||||||||||||||||  || || ||  |||||||||| |||||||||||||||| |||| |||||||||||||    
T  2956 gtctccttaagggctttaatttcatgtgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtgagtgtg 3055  T
Q  196 tgt 198  Q
    |||    
T  3056 tgt 3058  T

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Target: scaffold0679 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8144 - 8098
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcata 47  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  8144 aactcccccacacttgaatctttgcttgtcttcaagcaaaaggcata 8098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3519 - 3473
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcata 47  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  3519 aactcccccatacttgaatctttgcttgtcctcaagcaaaaggcata 3473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1248 - 1202
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcata 47  Q
    |||||||||| ||||||||||||| || |||||||||||| ||||||    
T  1248 aactcccccatacttgaatctttgcttttcctcaagcaaaaggcata 1202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 515 - 561
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcata 47  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  515 aactcccccatacttgaatctttgtttgtcctcaagcaaaaggcata 561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14667 - 14720
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacatgg 54  Q
    |||||||||| ||||||||||||| ||||||||||| ||| |||||| ||||||    
T  14667 aactcccccatacttgaatctttgcttgtcctcaagaaaaaggcataaacatgg 14720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 1081 - 1041
Alignment:
Q  161 ctattcaacccaacaataagtctcaagtgagtgtgtgtgtg 201  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  1081 ctattcaacccaacaacaagtttcaagtgagtgtgtgtgtg 1041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 1244 - 1193
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaagggcatagacat 52  Q
    |||||||||| ||||||||||||| |||||| |||||||| |||||| ||||    
T  1244 aactcccccatacttgaatctttgcttgtccacaagcaaaaggcataaacat 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 2910 - 2859
Alignment:
Q  152 cttgtaaacct-attcaacccaacaat-aagtctcaagtgagtgtgtgtgtg 201  Q
    ||||||||||| ||||||||||||||| |||| |||||||||||||||||||    
T  2910 cttgtaaaccttattcaacccaacaatcaagtttcaagtgagtgtgtgtgtg 2859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 620 - 659
Alignment:
Q  1 aactcccccacacttgaatctttggttgtcctcaagcaaa 40  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  620 aactcccccacacttgaatctttgcttgtcctaaagcaaa 659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 25624 - 25662
Alignment:
Q  162 tattcaacccaacaataagtctcaagtgagtgtgtgtgt 200  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  25624 tattcaacccaacaacaagtcttaagtgagtgtgtgtgt 25662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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