View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9401_low_68 (Length: 353)
Name: NF9401_low_68
Description: NF9401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9401_low_68 |
 | |
|
| [»] scaffold0516 (1 HSPs) |
| | |
|
| [»] scaffold0316 (1 HSPs) |
| | |
|
| [»] scaffold0182 (1 HSPs) |
| | |
|
| [»] scaffold0061 (1 HSPs) |
| | |
|
| [»] scaffold0017 (1 HSPs) |
| | |
|
| [»] scaffold0045 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 255; Significance: 1e-142; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 5 - 333
Target Start/End: Original strand, 35870227 - 35870557
Alignment:
| Q |
5 |
tattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaatctctcatgcttatgtcatgtggctatcttttgttcttgatt |
104 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||| |
|
|
| T |
35870227 |
tattctaagctacattttttctatgtgtcaccttaccaatgcccccctttctaactaatctctcatacttatgccatgtggctatcttttcttcttgatt |
35870326 |
T |
|
| Q |
105 |
ctttactagtcattccttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattat |
204 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35870327 |
ctttactagtcattccttactatctatctttcattttccatcagttgcgaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattat |
35870426 |
T |
|
| Q |
205 |
aatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctctt--acacacaagtttattactatatagctcctcann |
302 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||| |
|
|
| T |
35870427 |
aatccattttattaatattgagaggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaaggtcctcatt |
35870526 |
T |
|
| Q |
303 |
nnnnnctaagcttatatatatgttgcttatg |
333 |
Q |
| |
|
|||| ||||||||||||||||||||| |
|
|
| T |
35870527 |
tttttctaaacttatatatatgttgcttatg |
35870557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 5 - 333
Target Start/End: Original strand, 48266151 - 48266478
Alignment:
| Q |
5 |
tattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaatctctcatgcttatgtcatgtggctatcttttgttcttgatt |
104 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||| | |||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||| |
|
|
| T |
48266151 |
tattctaagcttcatttttcttatgtgtcaccttatctatgcccccctttctaactaatctc--atacttatgtcatgtggctatcttttcttcttgatt |
48266248 |
T |
|
| Q |
105 |
ctttactagtcattccttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattat |
204 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
48266249 |
ctttactagtcattccttactatctatctttcattttccatcagttgcaaaaactctccatttactt-acttcatgcaagttacacaatgaatgcattat |
48266347 |
T |
|
| Q |
205 |
aatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctctt--acacacaagtttattactatatagctcctcann |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
48266348 |
aatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctcatt |
48266447 |
T |
|
| Q |
303 |
nnnnnctaagcttatatatatgttgcttatg |
333 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
48266448 |
tttttctaagcttatatatatgttgcttatg |
48266478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 121 - 333
Target Start/End: Original strand, 52349726 - 52349940
Alignment:
| Q |
121 |
ttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
220 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52349726 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
52349825 |
T |
|
| Q |
221 |
attgaggggttacattttaaaattattcatattcttaatcaatcctctt--acacacaagtttattactatatagctcctcannnnnnnctaagcttata |
318 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||| |
|
|
| T |
52349826 |
attgaggggttacattttaaaattatttatattcttaatcaatcctcttacacacacaaatttattactataaagctcctcatttttttctaagcttata |
52349925 |
T |
|
| Q |
319 |
tatatgttgcttatg |
333 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
52349926 |
tatatgttgcttatg |
52349940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 26215163 - 26215420
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttc-taactaatctctcatgcttatgtcatgtggctatcttttgttct |
99 |
Q |
| |
|
|||||||||||| ||||||||| | ||||||| || | ||||||| |||||| ||||||||||||||| |||||| ||||||||| ||||||||||| |
|
|
| T |
26215163 |
catgtattctaaactacattttacttatgtgttacttcaccaatgtttcccttttgtaactaatctctcatacttatgccatgtggctctcttttgttct |
26215262 |
T |
|
| Q |
100 |
tgattctttactagtcattccttaccatcta-tctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatg |
198 |
Q |
| |
|
||||||||| |||| |||||||||| ||||| ||||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
26215263 |
tgattctttgctagccattccttactatctaatctttcattttccatcaattggaaaaactctccatttacttcacttcatggaagttacacaatgaatg |
26215362 |
T |
|
| Q |
199 |
cattataatccattttattaatattgaggggttacattttaaaattattcatattctt |
256 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
26215363 |
tgttataatccattttattaatagcgaggggttacattttaaaattattcatattctt |
26215420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10176765 - 10176716
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgccccc |
50 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10176765 |
catgtattctaaactacatttttcctatgtgtcaccttaccaatgccccc |
10176716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 5884481 - 5884423
Alignment:
| Q |
149 |
ttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataat |
207 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
5884481 |
ttgcaaaagcactgcatttacttcacttcatgcaagttgtacaatgaatgcattataat |
5884423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 43267970 - 43267912
Alignment:
| Q |
5 |
tattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaat |
63 |
Q |
| |
|
||||||||||||||||||| |||||| |||||| |||||||||||||| |||||||||| |
|
|
| T |
43267970 |
tattctaagctacattttttctatgtatcacctcaccaatgcccccctctctaactaat |
43267912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 54945835 - 54945777
Alignment:
| Q |
149 |
ttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataat |
207 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
54945835 |
ttgcaaaagcactgcatttacttcacttcatgcaagttgtacaatgaatgcattataat |
54945777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 52349565 - 52349607
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaa |
43 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
52349565 |
catgtattctaacctacatttttcctatgtgtcacctcaccaa |
52349607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 54949270 - 54949208
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaat |
63 |
Q |
| |
|
|||||||||||||||||| ||| | || ||||||| ||||||||||||||||||||||||| |
|
|
| T |
54949270 |
catgtattctaagctacactttacttacatgtcaccacaccaatgcccccctttctaactaat |
54949208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 33519266 - 33519206
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaacta |
61 |
Q |
| |
|
|||||||||||| |||||| || | ||||||||| ||||| |||||| ||||||||||||| |
|
|
| T |
33519266 |
catgtattctaacctacatattgcttatgtgtcatcttactaatgcctccctttctaacta |
33519206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 347
Target Start/End: Original strand, 26215432 - 26215538
Alignment:
| Q |
239 |
aaaattattcatattcttaatcaatcctctt--acacacaagtttattactatatagctcctcannnnnnnctaagcttatatatatgttgcttatgatg |
336 |
Q |
| |
|
||||||||||||||||||| |||||| |||| |||||||||| |||||||| ||||||||| ||||||| |||||||||||||||||| | |
|
|
| T |
26215432 |
aaaattattcatattcttagtcaatcatcttacacacacaagt---ttactataaagctcctca-ttttttctaagctcatatatatgttgcttatgtta |
26215527 |
T |
|
| Q |
337 |
tccatctcatt |
347 |
Q |
| |
|
||| ||||||| |
|
|
| T |
26215528 |
tccttctcatt |
26215538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3744513 - 3744451
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaat |
63 |
Q |
| |
|
|||||||||||| ||||| ||| | |||||||||||| |||||| | ||||| |||||||||| |
|
|
| T |
3744513 |
catgtattctaacctacactttgcttatgtgtcacctcaccaattctcccctctctaactaat |
3744451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 5 - 332
Target Start/End: Complemental strand, 47234079 - 47233751
Alignment:
| Q |
5 |
tattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaatctctcatgcttatgtcatgtggctatcttttgttcttgatt |
104 |
Q |
| |
|
|||||||| ||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
47234079 |
tattctaaactatatttttcctatgtgtcactttaccaatgccccc-tttctaactaatctctcatacttatgtcatgtggctatcttttgttcttgatt |
47233981 |
T |
|
| Q |
105 |
ctttactagtcattccttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattat |
204 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47233980 |
ctttactagtcattccttactatctatctttcattttccatcagttgcaaaaacacttcatttacttcacttcatgcaagttacacaatgaatgcattat |
47233881 |
T |
|
| Q |
205 |
aatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttaca--cacaagtttattactatatagctcctcann |
302 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
47233880 |
aatccattttattaatattaaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctcatt |
47233781 |
T |
|
| Q |
303 |
nnnnnctaagcttatatatatgttgcttat |
332 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
47233780 |
tttttataagcttatatatatgttgcttat |
47233751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 121 - 333
Target Start/End: Complemental strand, 5768206 - 5767992
Alignment:
| Q |
121 |
ttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
220 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
5768206 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatcaattttattaat |
5768107 |
T |
|
| Q |
221 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttaca--cacaagtttattactatatagctcctcannnnnnnctaagcttata |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
5768106 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctcatttttttctaagcttata |
5768007 |
T |
|
| Q |
319 |
tatatgttgcttatg |
333 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
5768006 |
tatatgttgcttatg |
5767992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 121 - 333
Target Start/End: Complemental strand, 25419717 - 25419503
Alignment:
| Q |
121 |
ttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
220 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25419717 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
25419618 |
T |
|
| Q |
221 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttaca--cacaagtttattactatatagctcctcannnnnnnctaagcttata |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||| ||||||||||| |
|
|
| T |
25419617 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaaatttattactataaagctcctcatttttttctaagcttata |
25419518 |
T |
|
| Q |
319 |
tatatgttgcttatg |
333 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
25419517 |
tatatgttgcttatg |
25419503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 121 - 300
Target Start/End: Complemental strand, 39067012 - 39066831
Alignment:
| Q |
121 |
ttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
220 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39067012 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
39066913 |
T |
|
| Q |
221 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacac--acaagtttattactatatagctcctca |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
39066912 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacatacaagtttattactataaggctcctca |
39066831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 72 - 347
Target Start/End: Original strand, 44393618 - 44393890
Alignment:
| Q |
72 |
cttatgtcatgtggctatcttttgttcttgattctttactagtcattccttaccatcta-tctttcattttccatcagttgcaaaaacactccatttact |
170 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||| ||| |||||| ||| ||||||| |
|
|
| T |
44393618 |
cttatgtcatgtggctctcttttgttcttgattctttactagtcatttcttactatctaatctttcatttcccatcaattggaaaaactctctatttact |
44393717 |
T |
|
| Q |
171 |
tcacttcatgcaagttacacaatgaatgcattataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctctt- |
269 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
44393718 |
tcacttcatggaagttacacaatgaatgtattataatccattttattaatagtgaggggtttcattttaaaattattcatattcttagtcaatcatctta |
44393817 |
T |
|
| Q |
270 |
-acacacaagtttattactatatagctcctcannnnnnnctaagcttatatatatgttgcttatgatgtccatctcatt |
347 |
Q |
| |
|
|||||||||| |||||||| ||||||||| ||||||| |||||||||||||||||| | ||| ||||||| |
|
|
| T |
44393818 |
cacacacaagt---ttactataaagctcctca---ttttctaagctcatatatatgttgcttatgttatccttctcatt |
44393890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 47933033 - 47932975
Alignment:
| Q |
149 |
ttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataat |
207 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
47933033 |
ttgcaaaagcactgcatttacttcacttcatgcaagttgtacaatgaatgcattataat |
47932975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39063993 - 39063933
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaacta |
61 |
Q |
| |
|
|||||||||||| ||||||||| | ||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
39063993 |
catgtattctaacctacattttgcttatgtgtcatcttaccaatgcctccctttctaacta |
39063933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39067174 - 39067114
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaacta |
61 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
39067174 |
catgtattctaacctacatttttcctatgtgtcacctcaccaacatccccctttctaacta |
39067114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17026577 - 17026639
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaat |
63 |
Q |
| |
|
|||||||||||||||||| ||| | |||||||||||| |||||| ||||||| |||||||||| |
|
|
| T |
17026577 |
catgtattctaagctacactttgcttatgtgtcacctcaccaattcccccctctctaactaat |
17026639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5768369 - 5768309
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaacta |
61 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| || || ||||||||||||||| |
|
|
| T |
5768369 |
catgtattctaacctacatttttcctatgtgtcacctcacaaacatccccctttctaacta |
5768309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25419866 - 25419824
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaa |
43 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
25419866 |
catgtattctaacctacatttttcctatgtgtcacctcaccaa |
25419824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 39073362 - 39073300
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaat |
63 |
Q |
| |
|
|||||||||||| ||||| ||| | |||||||||||| |||||| ||||||| |||||||||| |
|
|
| T |
39073362 |
catgtattctaacctacactttgcttatgtgtcacctcaccaattcccccctctctaactaat |
39073300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 47936469 - 47936407
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaat |
63 |
Q |
| |
|
|||||||||||||||||| ||| | || ||||||| ||||||||||||||||||||||||| |
|
|
| T |
47936469 |
catgtattctaagctacactttacttacatgtcaccacaccaatgcccccctttctaactaat |
47936407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 246; Significance: 1e-136; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 5 - 333
Target Start/End: Complemental strand, 53830767 - 53830433
Alignment:
| Q |
5 |
tattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaatctctcatgcttatgtcatgtggctatcttttgttcttgatt |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
53830767 |
tattctaagctacatttttcctatgtgtcaccttaccgatgcccccctttttaactaatctctcatacttatgccatgtggctatcttttgttcttgatt |
53830668 |
T |
|
| Q |
105 |
ctttactagtcattccttaccatctatct----ttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgca |
200 |
Q |
| |
|
||||||||| | |||||||| |||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53830667 |
ctttactagccgttccttactatctatctatctttcattttccatcggttgcaaaaacactctatttacttcacttcatgcaagttacacaatgaatgca |
53830568 |
T |
|
| Q |
201 |
ttataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttaca--cacaagtttattactatatagctcct |
298 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
53830567 |
ttataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcct |
53830468 |
T |
|
| Q |
299 |
cannnnnnnctaagcttatatatatgttgcttatg |
333 |
Q |
| |
|
|| |||||||||||||||||||||||||| |
|
|
| T |
53830467 |
catttttttctaagcttatatatatgttgcttatg |
53830433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 333
Target Start/End: Complemental strand, 34738061 - 34737730
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaatctctcatgcttatgtcatgtggctatcttttgttctt |
100 |
Q |
| |
|
|||||||||||| ||||||||| | |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| | |||||||||||| |
|
|
| T |
34738061 |
catgtattctaacctacattttgcatatgtgtcaccttaccaatgcctccctttctaactaatctctcatacttatgccatgtggatctcttttgttctt |
34737962 |
T |
|
| Q |
101 |
gattctttactagtcattccttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgca |
200 |
Q |
| |
|
||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
34737961 |
gattctttactagccattccgtacaatctatctttcattttccatcagttgcaaaaacactccatctacttcacttcatgcaagttacacaatgaatgca |
34737862 |
T |
|
| Q |
201 |
ttataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttacacaca--agtttattactatatagctcct |
298 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||| ||||||| |
|
|
| T |
34737861 |
ttataatccattttattaacaatgaggggttacattttaaaattattcatattcttgatcaatcctcttacacacacaagttta---ctataaagctcct |
34737765 |
T |
|
| Q |
299 |
cannnnnnnctaagcttatatatatgttgcttatg |
333 |
Q |
| |
|
|| |||||||||||||||||||||||||| |
|
|
| T |
34737764 |
catttttttctaagcttatatatatgttgcttatg |
34737730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 21802776 - 21803051
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaatctctcatgcttatgtcatgtggctatcttttgttctt |
100 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||| |||||||||||| |
|
|
| T |
21802776 |
catgtattctaagctacatttcgcctatgtgtcaccttaccaatgcccccctttctaactaatctctcatacttatgccaagtggctctcttttgttctt |
21802875 |
T |
|
| Q |
101 |
gattctttactagtcattccttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgca |
200 |
Q |
| |
|
||||||||||||| ||||| |||| ||||||||||||||| | |||||||||||||||| | ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
21802876 |
gattctttactagccattcattactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgca |
21802975 |
T |
|
| Q |
201 |
ttataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttacacaca |
276 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
21802976 |
ttataatccattttattaatattgaggggttacgttttaaaattgttcatattcttaatcaataatcttacacaca |
21803051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 21633032 - 21632756
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaatctctcatgcttatgtcatgtggctatcttttgttctt |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| || ||||| |||||||||||| |
|
|
| T |
21633032 |
catgtattctaagctacattttgcctatgtgtcaccttaccaatacccccctttctaactaatctctcatacttatgccaagtggcgctcttttgttctt |
21632933 |
T |
|
| Q |
101 |
gattctttactagtcattccttaccatctatctttcattttccatcagttgca-aaaacactccatttacttcacttcatgcaagttacacaatgaatgc |
199 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||||||||| |||||||||| |||||| | ||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
21632932 |
gattctttactagccattccttactatctatctttcattttctatcagttgcaaaaaacatttcatttacttcacttcttgcaagttacacgatgaatgc |
21632833 |
T |
|
| Q |
200 |
attataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttacacaca |
276 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
21632832 |
attatgatccattttattaatattgaggggttatgttttaaaattgttcatattcttaatcaatcttcttacacaca |
21632756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 121 - 333
Target Start/End: Complemental strand, 2505143 - 2504929
Alignment:
| Q |
121 |
ttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
220 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2505143 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
2505044 |
T |
|
| Q |
221 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttaca--cacaagtttattactatatagctcctcannnnnnnctaagcttata |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||| ||||||||||| |
|
|
| T |
2505043 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaaatttattactataaagctcctcatttttttctaagcttata |
2504944 |
T |
|
| Q |
319 |
tatatgttgcttatg |
333 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
2504943 |
tatatgttgcttatg |
2504929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 126 - 333
Target Start/End: Original strand, 46092308 - 46092517
Alignment:
| Q |
126 |
atctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaatattga |
225 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46092308 |
atctatctttcattttccatcggttacaaaaacttgccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaatattga |
46092407 |
T |
|
| Q |
226 |
ggggttacattttaaaattattcatattcttaatcaatcctctt--acacacaagtttattactatatagctcctcannnnnnnctaagcttatatatat |
323 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
46092408 |
ggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctcatttttttctaagcttatatatat |
46092507 |
T |
|
| Q |
324 |
gttgcttatg |
333 |
Q |
| |
|
|||||||||| |
|
|
| T |
46092508 |
gttgcttatg |
46092517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 126 - 333
Target Start/End: Original strand, 46134833 - 46135042
Alignment:
| Q |
126 |
atctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaatattga |
225 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46134833 |
atctatctttcattttccatcggttacaaaaacttgccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaatattga |
46134932 |
T |
|
| Q |
226 |
ggggttacattttaaaattattcatattcttaatcaatcctctt--acacacaagtttattactatatagctcctcannnnnnnctaagcttatatatat |
323 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
46134933 |
ggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctcatttttttctaagcttatatatat |
46135032 |
T |
|
| Q |
324 |
gttgcttatg |
333 |
Q |
| |
|
|||||||||| |
|
|
| T |
46135033 |
gttgcttatg |
46135042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 56 - 276
Target Start/End: Original strand, 5430644 - 5430868
Alignment:
| Q |
56 |
taactaatctctcatgcttatgtcatgtggctatcttttgttcttgattctttactagtcattccttaccatcta-tctttcattttccatcagttgcaa |
154 |
Q |
| |
|
|||||||| | |||| |||||| ||||||||| ||||||||||||||||||||||||| |||||||||| ||||| |||||||||| |||||| ||| || |
|
|
| T |
5430644 |
taactaatttttcatacttatgccatgtggctctcttttgttcttgattctttactagccattccttactatctaatctttcatttcccatcaattggaa |
5430743 |
T |
|
| Q |
155 |
aaacactccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttat---taatattgaggggttacattttaaaattattcata |
251 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
5430744 |
aaactctccatttacttcacttcatggaagttacacaatgaatgtattataatccattttattaataatagtgaggggttacattttaaaattattcata |
5430843 |
T |
|
| Q |
252 |
ttcttaatcaatcctcttacacaca |
276 |
Q |
| |
|
|||||| |||||| ||||||||||| |
|
|
| T |
5430844 |
ttcttagtcaatcatcttacacaca |
5430868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 72 - 276
Target Start/End: Complemental strand, 2500835 - 2500631
Alignment:
| Q |
72 |
cttatgtcatgtggctatcttttgttcttgattctttactagtcattccttaccatctatctttcattttccatcagttgcaaaaacactccatttactt |
171 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||| ||||| ||||||||||| || |||||||||||| ||||| |||||||||| || |||||||||| |
|
|
| T |
2500835 |
cttatgccatgtggctctcttttgttcttgattccctactaatcattccttactatttatctttcatttcccatccgttgcaaaaatacaccatttactt |
2500736 |
T |
|
| Q |
172 |
cacttcatgcaagttacacaatgaatgcattataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttac |
271 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
2500735 |
cacttcatgcaagttgcacaatgaatgcattataatccattttattaatattgtgcggttacattttaaaattatttgtattcttgatcaatcctcttac |
2500636 |
T |
|
| Q |
272 |
acaca |
276 |
Q |
| |
|
||||| |
|
|
| T |
2500635 |
acaca |
2500631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 89 - 273
Target Start/End: Original strand, 20036251 - 20036435
Alignment:
| Q |
89 |
tcttttgttcttgattctttactagtcattccttaccatctatctttcattttccatcagttgcaaaaa-cactccatttacttcacttcatgcaagtta |
187 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |||| ||||||||||||||| ||||||| || ||||| |||| || ||||||||||||||||||||| |
|
|
| T |
20036251 |
tcttttgttctt-attctttactagtcattcattactatctatctttcatttcccatcagatgtaaaaaacacttcagttacttcacttcatgcaagttg |
20036349 |
T |
|
| Q |
188 |
cacaatgaatgcattataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttacac |
273 |
Q |
| |
|
|| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
20036350 |
cataatgaatgcattataattcattttattaatattgagcagttacattttaaaattaatcatattcttaatcaatcctcttacac |
20036435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27256580 - 27256640
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaacta |
61 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27256580 |
catgtattctaacctacatttttcctatgtgtcaccttaccaatgcccccctttctaacta |
27256640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 51868300 - 51868360
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaacta |
61 |
Q |
| |
|
|||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||| |
|
|
| T |
51868300 |
catgtattctaacatacattttgcttatgtgtcaccttaccaatgcccccctttctaacta |
51868360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 43943462 - 43943520
Alignment:
| Q |
149 |
ttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataat |
207 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
43943462 |
ttgcaaaagcactgcatttacttcacttcatgcaagttgtacaatgaatgcattataat |
43943520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26382347 - 26382434
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgc-ccccctttctaactaatctctcatgcttatgtcatgtggct |
87 |
Q |
| |
|
|||||||||||||||||||||| | || |||||||| ||||| || | |||||| |||| |||||||||| |||||| ||||||||| |
|
|
| T |
26382347 |
catgtattctaagctacattttccttacatgtcacctcaccaaagctctccctttgtaaccaatctctcatacttatgccatgtggct |
26382434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2505292 - 2505250
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaa |
43 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
2505292 |
catgtattctaacctacatttttcctatgtgtcacctcaccaa |
2505250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26376855 - 26376915
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaacta |
61 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||| |||| || || ||||||||||||||| |
|
|
| T |
26376855 |
catgtattctaacctacattttacctatgtgtaacctcacaaacatccccctttctaacta |
26376915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46140697 - 46140637
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaacta |
61 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||| |||| || || ||||||||||||||| |
|
|
| T |
46140697 |
catgtattctaacctacattttacctatgtgtaacctcacaaacatccccctttctaacta |
46140637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 240; Significance: 1e-133; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 5 - 333
Target Start/End: Complemental strand, 21605324 - 21604997
Alignment:
| Q |
5 |
tattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaatctctcatgcttatgtcatgtggctatcttttgttcttgatt |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
21605324 |
tattctaagctacatttttcctatgtgtcaccttaccaataccccc-tttctaactaatctctcatacttatgtcatgtggctatcttttgttcttgatt |
21605226 |
T |
|
| Q |
105 |
ctttactagtcattccttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattat |
204 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21605225 |
ctttattagtcattccttactatctatctttcattttccattggctgcaaaaacacttcatttacttcacttcatgcaagttacacaatgaatgcattat |
21605126 |
T |
|
| Q |
205 |
aatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttaca--cacaagtttattactatatagctcctcann |
302 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
21605125 |
aatccattttattaatattgaggggttaaattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctcatt |
21605026 |
T |
|
| Q |
303 |
nnnnnctaagcttatatatatgttgcttatg |
333 |
Q |
| |
|
||||||| ||||||||||||||||| |
|
|
| T |
21605025 |
tttttctaagct--tatatatgttgcttatg |
21604997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 37302250 - 37301975
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaatctctcatgcttatgtcatgtggctatcttttgttctt |
100 |
Q |
| |
|
|||||||||||| ||||||||| | |||||||||||||||||||| | |||||||||||||||||| || |||||| ||||||| | |||||||||||| |
|
|
| T |
37302250 |
catgtattctaacctacattttgcatatgtgtcaccttaccaatgacttcctttctaactaatctcttatacttatgccatgtggatctcttttgttctt |
37302151 |
T |
|
| Q |
101 |
gattctttactagtcattccttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgca |
200 |
Q |
| |
|
||||||||||||| |||||| ||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37302150 |
gattctttactagccattccgtacaatctatctttcatttcccatcatttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgca |
37302051 |
T |
|
| Q |
201 |
ttataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttacacaca |
276 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
37302050 |
ttataatccattttattaataatggagggttacattttaaaattattcatattcttaatcaatccacttacacaca |
37301975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 121 - 333
Target Start/End: Original strand, 36991043 - 36991257
Alignment:
| Q |
121 |
ttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
220 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
36991043 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatctattttattaat |
36991142 |
T |
|
| Q |
221 |
attgaggggttacattttaaaattattcatattcttaatcaatcctctt--acacacaagtttattactatatagctcctcannnnnnnctaagcttata |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
36991143 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctcatttttttctaagcttata |
36991242 |
T |
|
| Q |
319 |
tatatgttgcttatg |
333 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
36991243 |
tatatgttgcttatg |
36991257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10180446 - 10180503
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaa |
58 |
Q |
| |
|
|||||||||||| ||||||||| | |||||||||||| ||||||||| |||||||||| |
|
|
| T |
10180446 |
catgtattctaacctacattttgcttatgtgtcacctcaccaatgcctccctttctaa |
10180503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36990880 - 36990940
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaacta |
61 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| || || ||||||||||||||| |
|
|
| T |
36990880 |
catgtattctaacctacatttttcctatgtgtcacctcacaaacatccccctttctaacta |
36990940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 11386778 - 11386865
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgc-ccccctttctaactaatctctcatgcttatgtcatgtggct |
87 |
Q |
| |
|
|||||||||||||||||||||| | || |||||||| ||||| | | |||||| |||| |||||||||| |||||| ||||||||| |
|
|
| T |
11386778 |
catgtattctaagctacattttccttacatgtcacctcaccaaaactctccctttgtaaccaatctctcatacttatgccatgtggct |
11386865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11381265 - 11381325
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaacta |
61 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||| |||| || || ||||||||||||||| |
|
|
| T |
11381265 |
catgtattctaacctacattttgcctatgtgtaacctcacaaacatccccctttctaacta |
11381325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 233; Significance: 1e-129; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 41646968 - 41646629
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatg-cccccctttctaactaatctctcatgcttatgtcatgtggctatcttttgttct |
99 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
41646968 |
catgtattataagctacatttttcctatgtgtcaccttaccaatgtcccccctttttaactaatctctcatacttatgccatgtggctatcttttgttct |
41646869 |
T |
|
| Q |
100 |
tgattctttactagtcattccttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgc |
199 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
41646868 |
tgattctttactagccattccttact---tatctttcattttccatcggttgcaaaaacactccatttacttcatttcatgcaagttacacaatgaatgt |
41646772 |
T |
|
| Q |
200 |
attataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttaca--cacaagtttattactatatagctcc |
297 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |
|
|
| T |
41646771 |
attttaatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcc |
41646672 |
T |
|
| Q |
298 |
tca-nnnnnnnctaagcttatatatatgttgcttatgatgtcc |
339 |
Q |
| |
|
||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
41646671 |
tcattttttttctaagcttatatatatgttgcttatgttgtcc |
41646629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 121 - 333
Target Start/End: Complemental strand, 7574233 - 7574019
Alignment:
| Q |
121 |
ttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
220 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7574233 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
7574134 |
T |
|
| Q |
221 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttaca--cacaagtttattactatatagctcctcannnnnnnctaagcttata |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||| ||||||||||| |
|
|
| T |
7574133 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaaatttattactataaagctcctcatttttttctaagcttata |
7574034 |
T |
|
| Q |
319 |
tatatgttgcttatg |
333 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
7574033 |
tatatgttgcttatg |
7574019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 121 - 333
Target Start/End: Complemental strand, 16668828 - 16668614
Alignment:
| Q |
121 |
ttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
220 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
16668828 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacataatgaatgcattataatccattttattaat |
16668729 |
T |
|
| Q |
221 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttaca--cacaagtttattactatatagctcctcannnnnnnctaagcttata |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| ||||||||| ||||||||||| |
|
|
| T |
16668728 |
attgaggggttacattttaaaattattcatattcttgatcaatcctcttacacacacaaatttattactataaagctcctcatttttttctaagcttata |
16668629 |
T |
|
| Q |
319 |
tatatgttgcttatg |
333 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
16668628 |
tatatgttgcttatg |
16668614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 200 - 266
Target Start/End: Original strand, 43564238 - 43564304
Alignment:
| Q |
200 |
attataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcct |
266 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43564238 |
attataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcct |
43564304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 200 - 269
Target Start/End: Original strand, 29455448 - 29455517
Alignment:
| Q |
200 |
attataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctctt |
269 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
29455448 |
attataatccattttattaatatcgaggggttacattttaaaattattcatattcttaattaatcctctt |
29455517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 37904137 - 37904075
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaat |
63 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
37904137 |
catgtattctaagctacatttttcctatgtgtcacctcaccaatgcccccctctctaactaat |
37904075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 29455086 - 29455145
Alignment:
| Q |
2 |
atgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaacta |
61 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | |||||| ||| ||||||||||| |
|
|
| T |
29455086 |
atgtattctaagctacatttttcctatgtgtcacttcaccaatatccctctttctaacta |
29455145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7574394 - 7574352
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaa |
43 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
7574394 |
catgtattctaacctacatttttcctatgtgtcacctcaccaa |
7574352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16668977 - 16668935
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaa |
43 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
16668977 |
catgtattctaacctacatttttcctatgtgtcacctcaccaa |
16668935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 22990071 - 22990009
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaat |
63 |
Q |
| |
|
|||||||||||| |||||||| | |||||||||||| |||||| ||||||| |||||||||| |
|
|
| T |
22990071 |
catgtattctaacgtacattttgcttatgtgtcacctcaccaattcccccctctctaactaat |
22990009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 31618616 - 31618560
Alignment:
| Q |
5 |
tattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaacta |
61 |
Q |
| |
|
|||||||||||||| ||| |||||||||||| |||||| ||||||||||||||| |
|
|
| T |
31618616 |
tattctaagctacactttgtttatgtgtcacctcaccaatatccccctttctaacta |
31618560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 2 - 276
Target Start/End: Complemental strand, 8150752 - 8150478
Alignment:
| Q |
2 |
atgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaatctctcatgcttatgtcatgtggctatcttttgttcttg |
101 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| || |||||||||||| |
|
|
| T |
8150752 |
atgtattctaagctacattttgcatatgtgtcaccttaccaatgcccccctttctaactaatctctcatacttatgccatgtgactcacttttgttcttg |
8150653 |
T |
|
| Q |
102 |
attctttactagtcattccttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcat |
201 |
Q |
| |
|
|||||||||||| |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
8150652 |
attctttactagccatttcttactatctatctttcatttcccatcagttgcaaaaacactccatttacttcactttatgcgagttacacaatgaatgcat |
8150553 |
T |
|
| Q |
202 |
tataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttacacaca |
276 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
8150552 |
tataatcaattttattaatattgaggggttacattttaaaattattcatattcttaatcagtcctcttacacaca |
8150478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 10186234 - 10186509
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaatctctcatgcttatgtcatgtggctatcttttgttctt |
100 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| | |||||| || ||| || |||||||||||| |
|
|
| T |
10186234 |
catgtattctaagctacatttcgcctatgtgtcaccttaccaatgcccccctttctaactaatatctcttacttatgccaagtgactctcttttgttctt |
10186333 |
T |
|
| Q |
101 |
gattctttactagtcattccttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgca |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||| | ||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
10186334 |
gattctttactagtcattccttactatctatctttcatttcctatcagttgcaaaaacatttcatttacctcacttcttgcaagttacacaatgaatgca |
10186433 |
T |
|
| Q |
201 |
ttataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttacacaca |
276 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10186434 |
ttataatccattttattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacaca |
10186509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 4138197 - 4138479
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaatctctcatgcttatgtcatgtggctatcttttgttctt |
100 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||| |||||||||||| |
|
|
| T |
4138197 |
catgtattctaagctacatttcgcctatgtgtcaccttaccaatgcccccctttctaactaatctctcatacttatgccaagtggctctcttttgttctt |
4138296 |
T |
|
| Q |
101 |
gattctttactagtcattccttaccatctatct-------ttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaat |
193 |
Q |
| |
|
||||||||||||| ||||| ||| |||||||| ||||||| | ||| |||||||||||| | ||||||||||||||| ||||||||||||||| |
|
|
| T |
4138297 |
gattctttactagccattctctactatctatctttcatctttcatttcctatccgttgcaaaaacatttcatttacttcacttcttgcaagttacacaat |
4138396 |
T |
|
| Q |
194 |
gaatgcattataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttacacaca |
276 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
4138397 |
gaatgcattataatctattttattaatattgaggggttacgttttaaaattgttcatattcttaatcaagactcttacacaca |
4138479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 72 - 347
Target Start/End: Original strand, 20171908 - 20172180
Alignment:
| Q |
72 |
cttatgtcatgtggctatcttttgttcttgattctttactagtcattccttaccatcta-tctttcattttccatcagttgcaaaaacactccatttact |
170 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||| ||| |||||| ||| ||||||| |
|
|
| T |
20171908 |
cttatgtcatgtggctctcttttgttcttgattctttactagtcatttcttactatctaatctttcatttcccatcaattggaaaaactctctatttact |
20172007 |
T |
|
| Q |
171 |
tcacttcatgcaagttacacaatgaatgcattataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctctt- |
269 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
20172008 |
tcacttcatggaagttacacaatgaatgtattataatccattttattaatagtgaggggtttcattttaaaattattcatattcttagtcaatcatctta |
20172107 |
T |
|
| Q |
270 |
-acacacaagtttattactatatagctcctcannnnnnnctaagcttatatatatgttgcttatgatgtccatctcatt |
347 |
Q |
| |
|
|||||||||| |||||||| ||||||||| ||||||| |||||||||||||||||| | ||| ||||||| |
|
|
| T |
20172108 |
cacacacaagt---ttactataaagctcctca---ttttctaagctcatatatatgttgcttatgttatccttctcatt |
20172180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 11428381 - 11428184
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttc-taactaatctctcatgcttatgtcatgtggctatcttttgttct |
99 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||| || ||| |||||| |||||||| | |||| |||||| | ||||||| ||||||||||| |
|
|
| T |
11428381 |
catgtattctaagctacattttgcttatgtgtcacctcactaatatttcccttttgtaactaatttttcatacttatgccttgtggctctcttttgttct |
11428282 |
T |
|
| Q |
100 |
tgattctttactagtcattccttaccatcta-tctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaa |
196 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| ||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
11428281 |
tgattctttactagccattccttactatctaatctttcattttccatcaattggaaaaactatccatttacttcacttcatggaagttacacaatgaa |
11428184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 200 - 269
Target Start/End: Complemental strand, 919018 - 918949
Alignment:
| Q |
200 |
attataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctctt |
269 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
919018 |
attataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctctt |
918949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14597549 - 14597489
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaacta |
61 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
14597549 |
catgtattctaagctacattttgcctatatgtcaccttaccaattcccccctttctaacta |
14597489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 11428182 - 11428129
Alignment:
| Q |
223 |
tgaggggttacattttaaaattattcatattcttaatcaatcctcttacacaca |
276 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
11428182 |
tgaggggttacattttaaaattattcatattcttagtcaatcatcttacacaca |
11428129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28841609 - 28841671
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaat |
63 |
Q |
| |
|
|||||||||||||||| | ||| | |||||||||||| |||||| ||||||| |||||||||| |
|
|
| T |
28841609 |
catgtattctaagctatactttgcttatgtgtcacctcaccaattcccccctctctaactaat |
28841671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 31686163 - 31686249
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaatctctcatgcttatgtcatgtggct |
87 |
Q |
| |
|
|||||||||||| |||||| || | |||||||||||| || || ||||||||||||| ||| || |||| || ||||||||||||| |
|
|
| T |
31686163 |
catgtattctaaactacatattgcttatgtgtcacctcacaaaaacccccctttctaattaacctttcatactaatgtcatgtggct |
31686249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 14597465 - 14597421
Alignment:
| Q |
6 |
attctaagctacatttttcctatgtgtcaccttaccaatgccccc |
50 |
Q |
| |
|
||||||||||||| ||| | |||||||||||| |||||||||||| |
|
|
| T |
14597465 |
attctaagctacactttacttatgtgtcacctcaccaatgccccc |
14597421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0516 (Bit Score: 176; Significance: 9e-95; HSPs: 1)
Name: scaffold0516
Description:
Target: scaffold0516; HSP #1
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 2 - 276
Target Start/End: Original strand, 3127 - 3402
Alignment:
| Q |
2 |
atgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttc-taactaatctctcatgcttatgtcatgtggctatcttttgttctt |
100 |
Q |
| |
|
||||||| ||| ||||||||| | |||||||||| | ||||| | | |||||| ||||||||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
3127 |
atgtattttaaactacattttacttatgtgtcacttcaccaacgtctcccttttgtaactaatctctcatacttatgtcatgtggctctcttttgttctt |
3226 |
T |
|
| Q |
101 |
gattctttactagtcattccttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgca |
200 |
Q |
| |
|
||||||||||||| ||||| |||| || |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||| || | |
|
|
| T |
3227 |
gattctttactagccattctttactatttatctttcatttcccatcagttgcaaaaacacttcatttacttcacttcatgcaagttgcacaatgattgaa |
3326 |
T |
|
| Q |
201 |
ttataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttacacaca |
276 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3327 |
ttataatccattttattaatattaagcggttacattttaaaattattcatattcttaatcaatcctcttacacaca |
3402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 163; Significance: 5e-87; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 121 - 333
Target Start/End: Complemental strand, 13433595 - 13433381
Alignment:
| Q |
121 |
ttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
220 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13433595 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
13433496 |
T |
|
| Q |
221 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttaca--cacaagtttattactatatagctcctcannnnnnnctaagcttata |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||| ||||||||||| |
|
|
| T |
13433495 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaaatttattactataaagctcctcatttttttctaagcttata |
13433396 |
T |
|
| Q |
319 |
tatatgttgcttatg |
333 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
13433395 |
tatatgttgcttatg |
13433381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 16712155 - 16712096
Alignment:
| Q |
217 |
taatattgaggggttacattttaaaattattcatattcttaatcaatcctcttacacaca |
276 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16712155 |
taatagtgaggggttacattttaaaattattcatattcttaatcaatcatcttacacaca |
16712096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 16857232 - 16857290
Alignment:
| Q |
149 |
ttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataat |
207 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
16857232 |
ttgcaaaagcactgcatttacttcacttcatgcaagttgtacaatgaatgcattataat |
16857290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18877371 - 18877431
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaacta |
61 |
Q |
| |
|
|||||||||||| ||||||||| | || ||||||||||||||||||| ||||||||||||| |
|
|
| T |
18877371 |
catgtattctaacctacattttgcttaggtgtcaccttaccaatgcctccctttctaacta |
18877431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 18880846 - 18880907
Alignment:
| Q |
2 |
atgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaat |
63 |
Q |
| |
|
||||||||||||||||| ||| | |||||||||||| |||||| ||||||| |||||||||| |
|
|
| T |
18880846 |
atgtattctaagctacactttgcttatgtgtcacctcaccaattcccccctctctaactaat |
18880907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 26615380 - 26615320
Alignment:
| Q |
149 |
ttgcaaaaacactccatttacttcacttcatgcaa--gttacacaatgaatgcattataat |
207 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
26615380 |
ttgcaaaaacacttcatttacttcacttcatgcaattgttgtacaatgaatgcattataat |
26615320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 26721308 - 26721248
Alignment:
| Q |
149 |
ttgcaaaaacactccatttacttcacttcatgcaa--gttacacaatgaatgcattataat |
207 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
26721308 |
ttgcaaaaacacttcatttacttcacttcatgcaattgttgtacaatgaatgcattataat |
26721248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13433756 - 13433714
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaa |
43 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
13433756 |
catgtattctaacctacatttttcctatgtgtcacctcaccaa |
13433714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 163; Significance: 5e-87; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 121 - 333
Target Start/End: Original strand, 13786229 - 13786443
Alignment:
| Q |
121 |
ttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
220 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13786229 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
13786328 |
T |
|
| Q |
221 |
attgaggggttacattttaaaattattcatattcttaatcaatcctctt--acacacaagtttattactatatagctcctcannnnnnnctaagcttata |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||| |
|
|
| T |
13786329 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaaatttattactataaagctcctcatttttttctaagcttata |
13786428 |
T |
|
| Q |
319 |
tatatgttgcttatg |
333 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
13786429 |
tatatgttgcttatg |
13786443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 51 - 333
Target Start/End: Complemental strand, 22912740 - 22912459
Alignment:
| Q |
51 |
ctttctaactaatctctcatgcttatgtcatgtggctatcttttgttcttgattctttactagtcattccttaccatctatctttcattttccatca-gt |
149 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| ||||||||| || |||||||||||| |||||| || |
|
|
| T |
22912740 |
ctttctaactaatctctcatacttatgccatgtggctctcttttgttcttgattctttactagccattccttattatttatctttcatttcccatcaggt |
22912641 |
T |
|
| Q |
150 |
tgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaatattgaggggttacattttaaaattattca |
249 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||| |||||| |||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
22912640 |
tgcagaaacactccatttacttcacttcttgcatgttacaaaatgaatgcattataaaccattttattaata-tgaggagttacattttaaaattattca |
22912542 |
T |
|
| Q |
250 |
tattcttaatcaatcctcttacacacaagtttattactatatagctcctcannnnnnnctaagcttatatatatgttgcttatg |
333 |
Q |
| |
|
||||||||||||||||||||||||||| | | ||||||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
22912541 |
tattcttaatcaatcctcttacacacacgaat-ttactattaagctcctcatttttttctaagcttatatatatgttgcttatg |
22912459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 56 - 282
Target Start/End: Complemental strand, 23726231 - 23726006
Alignment:
| Q |
56 |
taactaatctctcatgcttatgtcatgtggctatcttttgttcttgattctttactagtcattccttaccatctatctttcattttccatcagttgcaaa |
155 |
Q |
| |
|
||||||||||||||| ||||||| || ||||| ||||||||||||||||||||||| ||||||| |||| |||||||||||||||| |||| |||||||| |
|
|
| T |
23726231 |
taactaatctctcatacttatgttatatggctctcttttgttcttgattctttactggtcattctttactatctatctttcatttttcatctgttgcaaa |
23726132 |
T |
|
| Q |
156 |
aacactccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaatattgaggggttacattttaaaattattcatattct |
255 |
Q |
| |
|
|||||| ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||| | ||||||||||| |||||||||||||||| |
|
|
| T |
23726131 |
aacacttcatttacttcatttcatgcaagttgcacaatgaatgaattataatccattttattaatattaaacggttacatttt-aaattattcatattct |
23726033 |
T |
|
| Q |
256 |
taatcaatcctcttacacacaagttta |
282 |
Q |
| |
|
|||||||||||||| |||||||||||| |
|
|
| T |
23726032 |
taatcaatcctcttgcacacaagttta |
23726006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 121 - 333
Target Start/End: Complemental strand, 25807914 - 25807699
Alignment:
| Q |
121 |
ttaccatctatctttcattttccatcagttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
220 |
Q |
| |
|
|||| |||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25807914 |
ttactatctatctttcattttccatcaattacaaaaactttccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
25807815 |
T |
|
| Q |
221 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttaca--cacaagtttattactatatagctcctca-nnnnnnnctaagcttat |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
25807814 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctcattttttttctaagcttat |
25807715 |
T |
|
| Q |
318 |
atatatgttgcttatg |
333 |
Q |
| |
|
||||||||| |||||| |
|
|
| T |
25807714 |
atatatgtttcttatg |
25807699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13786068 - 13786110
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaa |
43 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
13786068 |
catgtattctaacctacatttttcctatgtgtcacctcaccaa |
13786110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25808075 - 25808033
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaa |
43 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
25808075 |
catgtattctaacctacatttttcctatgtgtcacctcaccaa |
25808033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 39621653 - 39621715
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaat |
63 |
Q |
| |
|
|||||||||||| ||||| ||| | |||||||||||| |||||| ||||||| |||||||||| |
|
|
| T |
39621653 |
catgtattctaaactacactttgcttatgtgtcacctcaccaattcccccctctctaactaat |
39621715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0316 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0316
Description:
Target: scaffold0316; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5537 - 5480
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaa |
58 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
5537 |
catgtattctaacctacatttttcctatgtgtcaccttaccaatgttcccctttctaa |
5480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 10229 - 10171
Alignment:
| Q |
149 |
ttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataat |
207 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10229 |
ttgcaaaagcactgcatttacttcacttcatgcaagttgtgcaatgaatgcattataat |
10171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 46427 - 46366
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaat |
63 |
Q |
| |
|
|||||||||||||||||| ||| | |||||||||||| |||||| |||||||||||||||| |
|
|
| T |
46427 |
catgtattctaagctacactttacttatgtgtcacctcaccaat-ttcccctttctaactaat |
46366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 152360 - 152421
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaactaat |
63 |
Q |
| |
|
|||||||||||||||||| ||| | |||||||||||| |||||| |||||||||||||||| |
|
|
| T |
152360 |
catgtattctaagctacactttacttatgtgtcacctcaccaat-ttcccctttctaactaat |
152421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1412 - 1352
Alignment:
| Q |
1 |
catgtattctaagctacatttttcctatgtgtcaccttaccaatgcccccctttctaacta |
61 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||| |||| || || ||||||||||||||| |
|
|
| T |
1412 |
catgtattctaacctacattttgcctatgtgtaacctcacaaacatccccctttctaacta |
1352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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