View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9401_low_96 (Length: 252)

Name: NF9401_low_96
Description: NF9401
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9401_low_96
NF9401_low_96
[»] chr1 (34 HSPs)
chr1 (1-226)||(23378459-23378683)
chr1 (54-225)||(23591698-23591867)
chr1 (54-225)||(1502729-1502897)
chr1 (54-225)||(38812740-38812909)
chr1 (54-225)||(13321876-13322045)
chr1 (54-225)||(30171879-30172048)
chr1 (54-225)||(30187420-30187589)
chr1 (54-225)||(23576423-23576591)
chr1 (54-223)||(6754474-6754640)
chr1 (61-209)||(36490795-36490941)
chr1 (54-223)||(41624832-41624998)
chr1 (54-225)||(6180186-6180355)
chr1 (54-225)||(39150336-39150504)
chr1 (77-225)||(39627603-39627749)
chr1 (54-225)||(35512725-35512894)
chr1 (70-214)||(47355403-47355544)
chr1 (59-225)||(7824872-7825036)
chr1 (54-225)||(22167335-22167504)
chr1 (70-214)||(7520022-7520164)
chr1 (54-171)||(52337821-52337935)
chr1 (54-225)||(17919454-17919622)
chr1 (136-224)||(5857990-5858079)
chr1 (155-228)||(29924356-29924429)
chr1 (54-105)||(25465276-25465327)
chr1 (113-225)||(34050351-34050461)
chr1 (159-225)||(44918025-44918091)
chr1 (114-225)||(3121119-3121227)
chr1 (159-224)||(8062206-8062271)
chr1 (108-163)||(33048175-33048227)
chr1 (136-193)||(35941110-35941167)
chr1 (140-217)||(43317498-43317575)
chr1 (116-213)||(50079870-50079966)
chr1 (160-225)||(51382372-51382437)
chr1 (108-209)||(25956665-25956764)
[»] chr4 (41 HSPs)
chr4 (62-225)||(2096871-2097032)
chr4 (54-225)||(24684836-24685006)
chr4 (54-225)||(9759151-9759319)
chr4 (56-225)||(19468194-19468361)
chr4 (56-223)||(19450911-19451076)
chr4 (54-225)||(16667393-16667562)
chr4 (61-225)||(50352303-50352464)
chr4 (54-225)||(17409824-17409993)
chr4 (54-223)||(49181074-49181241)
chr4 (117-225)||(7349689-7349794)
chr4 (141-211)||(10813587-10813658)
chr4 (56-225)||(40049559-40049725)
chr4 (62-225)||(8736828-8736988)
chr4 (54-225)||(23545476-23545645)
chr4 (54-225)||(27019260-27019429)
chr4 (54-225)||(34941278-34941447)
chr4 (62-188)||(37784877-37785001)
chr4 (116-225)||(6875501-6875608)
chr4 (109-225)||(25843291-25843406)
chr4 (54-210)||(27362406-27362560)
chr4 (62-225)||(52391298-52391459)
chr4 (54-225)||(54495646-54495815)
chr4 (160-225)||(10389380-10389445)
chr4 (110-224)||(33632267-33632379)
chr4 (157-214)||(40681960-40682017)
chr4 (160-225)||(49228357-49228422)
chr4 (63-169)||(1378075-1378178)
chr4 (110-224)||(19838756-19838866)
chr4 (62-212)||(39876844-39876991)
chr4 (162-225)||(45742368-45742431)
chr4 (61-169)||(55813920-55814026)
chr4 (110-201)||(13009820-13009909)
chr4 (54-225)||(47326901-47327070)
chr4 (54-225)||(47341697-47341866)
chr4 (136-225)||(49332333-49332423)
chr4 (148-225)||(10658544-10658621)
chr4 (148-225)||(10872689-10872766)
chr4 (62-224)||(51691343-51691502)
chr4 (158-225)||(3728249-3728317)
chr4 (54-130)||(18882276-18882352)
chr4 (115-172)||(35645071-35645126)
[»] chr7 (26 HSPs)
chr7 (115-225)||(42750289-42750396)
chr7 (54-224)||(47457470-47457638)
chr7 (54-226)||(26300572-26300740)
chr7 (54-225)||(24462964-24463132)
chr7 (54-225)||(33342989-33343157)
chr7 (54-223)||(7170005-7170171)
chr7 (54-218)||(25709408-25709570)
chr7 (54-225)||(46290011-46290179)
chr7 (54-225)||(4969773-4969942)
chr7 (54-225)||(19889341-19889509)
chr7 (116-225)||(19868114-19868221)
chr7 (54-225)||(34270266-34270430)
chr7 (1-44)||(19017882-19017925)
chr7 (54-225)||(9331962-9332130)
chr7 (54-225)||(23982764-23982933)
chr7 (54-132)||(33072072-33072150)
chr7 (54-224)||(36548469-36548636)
chr7 (72-225)||(47707911-47708065)
chr7 (108-198)||(3530177-3530264)
chr7 (54-198)||(8091321-8091463)
chr7 (54-100)||(26050470-26050516)
chr7 (54-100)||(26059829-26059875)
chr7 (54-132)||(29398143-29398221)
chr7 (160-225)||(24250314-24250379)
chr7 (160-225)||(29398227-29398292)
chr7 (136-215)||(12650831-12650911)
[»] chr8 (45 HSPs)
chr8 (54-225)||(26682068-26682237)
chr8 (54-225)||(6818017-6818186)
chr8 (54-225)||(31812113-31812282)
chr8 (54-225)||(3306064-3306232)
chr8 (54-225)||(20514632-20514802)
chr8 (54-225)||(2161388-2161556)
chr8 (160-225)||(7750668-7750733)
chr8 (61-225)||(12131983-12132145)
chr8 (54-225)||(9580118-9580287)
chr8 (118-225)||(14816198-14816303)
chr8 (118-225)||(14829437-14829542)
chr8 (110-225)||(38843704-38843817)
chr8 (160-225)||(11923015-11923080)
chr8 (160-225)||(38527821-38527886)
chr8 (54-189)||(39024866-39024998)
chr8 (54-225)||(12189597-12189766)
chr8 (54-225)||(12434025-12434194)
chr8 (110-196)||(34741730-34741813)
chr8 (139-225)||(8284660-8284747)
chr8 (61-225)||(45005970-45006131)
chr8 (140-217)||(5298077-5298157)
chr8 (54-225)||(13327950-13328118)
chr8 (118-225)||(35678347-35678452)
chr8 (54-225)||(36967079-36967248)
chr8 (160-225)||(7140571-7140636)
chr8 (160-225)||(9824959-9825024)
chr8 (111-205)||(16445801-16445893)
chr8 (160-225)||(40210933-40210998)
chr8 (164-224)||(11947016-11947076)
chr8 (117-225)||(9743862-9743967)
chr8 (110-218)||(10974619-10974725)
chr8 (54-223)||(28014867-28015032)
chr8 (54-132)||(2083078-2083156)
chr8 (179-225)||(11117129-11117175)
chr8 (54-225)||(26834561-26834730)
chr8 (114-225)||(32186186-32186295)
chr8 (177-227)||(37523756-37523806)
chr8 (183-225)||(38213081-38213123)
chr8 (140-198)||(44091346-44091404)
chr8 (160-225)||(10129104-10129169)
chr8 (160-225)||(12346006-12346071)
chr8 (141-198)||(45516316-45516373)
chr8 (57-217)||(1844572-1844731)
chr8 (140-223)||(35583368-35583453)
chr8 (160-224)||(40568314-40568378)
[»] chr2 (32 HSPs)
chr2 (55-225)||(15411632-15411800)
chr2 (54-225)||(9747317-9747486)
chr2 (61-225)||(5583574-5583735)
chr2 (54-225)||(14377425-14377593)
chr2 (140-225)||(12438740-12438825)
chr2 (54-216)||(45062207-45062367)
chr2 (54-225)||(23932565-23932734)
chr2 (54-225)||(27665053-27665221)
chr2 (62-225)||(43806360-43806521)
chr2 (54-188)||(24729586-24729718)
chr2 (61-225)||(34213965-34214129)
chr2 (117-225)||(34817544-34817649)
chr2 (136-225)||(39367059-39367149)
chr2 (54-225)||(7757795-7757963)
chr2 (160-225)||(12016667-12016732)
chr2 (70-172)||(2579983-2580082)
chr2 (160-224)||(7720116-7720180)
chr2 (54-130)||(26003355-26003431)
chr2 (116-200)||(2051639-2051721)
chr2 (139-225)||(43388857-43388944)
chr2 (54-225)||(19228426-19228594)
chr2 (110-225)||(36612796-36612909)
chr2 (110-225)||(36620647-36620760)
chr2 (175-225)||(36909503-36909553)
chr2 (159-225)||(39904159-39904225)
chr2 (160-225)||(4579901-4579966)
chr2 (168-225)||(16754971-16755028)
chr2 (160-225)||(16919266-16919331)
chr2 (160-225)||(22705455-22705520)
chr2 (168-225)||(26003612-26003669)
chr2 (134-217)||(25998088-25998172)
chr2 (55-225)||(26229864-26230030)
[»] chr6 (18 HSPs)
chr6 (54-225)||(6016856-6017025)
chr6 (72-225)||(30623326-30623477)
chr6 (62-225)||(8977483-8977644)
chr6 (54-225)||(34692354-34692523)
chr6 (54-225)||(14228135-14228303)
chr6 (54-225)||(28943778-28943946)
chr6 (118-208)||(29730295-29730383)
chr6 (54-223)||(10887031-10887198)
chr6 (56-225)||(33017725-33017891)
chr6 (70-225)||(1017803-1017956)
chr6 (54-225)||(29863311-29863480)
chr6 (160-225)||(1814894-1814959)
chr6 (160-225)||(3485711-3485776)
chr6 (54-225)||(17552596-17552764)
chr6 (160-225)||(24979262-24979327)
chr6 (168-223)||(17596315-17596370)
chr6 (54-225)||(18332697-18332866)
chr6 (160-225)||(5363005-5363070)
[»] chr5 (26 HSPs)
chr5 (54-225)||(30839782-30839950)
chr5 (54-225)||(36597580-36597748)
chr5 (54-223)||(8103589-8103755)
chr5 (61-225)||(18841721-18841883)
chr5 (54-225)||(3398220-3398389)
chr5 (54-225)||(40512952-40513120)
chr5 (118-225)||(5958196-5958301)
chr5 (54-225)||(11636732-11636900)
chr5 (54-163)||(15240959-15241065)
chr5 (136-217)||(10665053-10665134)
chr5 (168-225)||(11360186-11360243)
chr5 (181-225)||(11250090-11250134)
chr5 (117-214)||(28629890-28629984)
chr5 (181-225)||(33072677-33072721)
chr5 (54-225)||(2795524-2795692)
chr5 (159-213)||(11375972-11376026)
chr5 (70-132)||(15820317-15820379)
chr5 (56-146)||(23995427-23995516)
chr5 (61-131)||(31567507-31567577)
chr5 (159-225)||(34578012-34578078)
chr5 (115-198)||(40309497-40309580)
chr5 (160-225)||(24014800-24014865)
chr5 (54-172)||(6863610-6863725)
chr5 (54-130)||(7162934-7163010)
chr5 (1-29)||(20058109-20058137)
chr5 (5-37)||(24015674-24015706)
[»] chr3 (31 HSPs)
chr3 (54-225)||(2571269-2571437)
chr3 (54-225)||(10307767-10307935)
chr3 (56-225)||(54527717-54527884)
chr3 (54-225)||(38389447-38389616)
chr3 (54-225)||(50204403-50204572)
chr3 (117-226)||(20938056-20938162)
chr3 (54-223)||(46492352-46492519)
chr3 (54-225)||(51618050-51618216)
chr3 (115-208)||(53794781-53794872)
chr3 (138-216)||(2379162-2379238)
chr3 (64-193)||(38786343-38786468)
chr3 (54-225)||(11610915-11611083)
chr3 (135-218)||(24569324-24569408)
chr3 (140-223)||(37444149-37444232)
chr3 (139-226)||(40330381-40330468)
chr3 (62-225)||(13495294-13495455)
chr3 (62-225)||(42180052-42180213)
chr3 (137-225)||(37055455-37055544)
chr3 (136-225)||(47386922-47387013)
chr3 (56-132)||(51401531-51401607)
chr3 (174-225)||(8497550-8497601)
chr3 (54-218)||(45983516-45983675)
chr3 (139-225)||(46845531-46845618)
chr3 (140-214)||(13879899-13879973)
chr3 (54-100)||(25633121-25633167)
chr3 (160-226)||(26200733-26200799)
chr3 (62-225)||(12515491-12515651)
chr3 (54-131)||(23523038-23523115)
chr3 (141-225)||(30214103-30214187)
chr3 (160-225)||(32321835-32321899)
chr3 (55-132)||(49396471-49396548)
[»] scaffold0111 (1 HSPs)
scaffold0111 (54-225)||(37123-37292)
[»] scaffold0631 (1 HSPs)
scaffold0631 (181-224)||(443-486)
[»] scaffold0129 (1 HSPs)
scaffold0129 (110-218)||(13723-13829)
[»] scaffold0618 (1 HSPs)
scaffold0618 (140-198)||(8506-8564)
[»] scaffold0061 (1 HSPs)
scaffold0061 (54-225)||(52788-52956)
[»] scaffold0036 (1 HSPs)
scaffold0036 (113-224)||(94086-94195)
[»] scaffold0017 (1 HSPs)
scaffold0017 (54-225)||(145678-145846)
[»] scaffold0011 (1 HSPs)
scaffold0011 (54-225)||(13086-13254)
[»] scaffold0305 (1 HSPs)
scaffold0305 (61-163)||(18012-18111)
[»] scaffold0149 (1 HSPs)
scaffold0149 (181-225)||(22460-22504)


Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 23378459 - 23378683
Alignment:
Q  1 ttcattagataattttatttgatgatgttttattgttggtataaagcctagactcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23378459 ttcattagataattttatttgatgatgttttattgttggtataa-gcctagactcatgtacaaatttgaacatgttaagaatttcaaaatagtaaatttg 23378557  T
Q  101 aattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23378558 aattgctatttgtacattttatattaaatatagtgtaactttttaacaaataattgttattttcaataaaaagttattaattttagttgttttaacatat 23378657  T
Q  201 gtaatattgcacatgttaaacaaaca 226  Q
    ||||||||||||||||||||||||||    
T  23378658 gtaatattgcacatgttaaacaaaca 23378683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 23591867 - 23591698
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| ||  ||||   || |||| ||||  | ||||||||||| |||||||||||   ||||||||||| ||||||    
T  23591867 tcatgtgcaaatttgcacatgttaagaaattttaaataacaactttgcattggaacttgtacattttgtattaaatata---taactttttaataaataa 23591771  T
Q  154 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     | || |||||||||||||| ||| |||||||||||| |||||||| || ||| |||||||||||| ||||||    
T  23591770 ttattgattttcaataaaaacttactaattttagttgctttaacatgtgcaatgttgcacatgttagacaaac 23591698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 1502729 - 1502897
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  ||||| ||||||| |||||||||||   |||||||||   ||||||    
T  1502729 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatata---taactttttgttaaataa 1502825  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||| ||||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  1502826 ttgttgttttcaataaaaatttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 1502897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 38812909 - 38812740
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| |||||||| | || |||  ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  38812909 tcatgtgcaaatttgcacatgttaagaagttcaaaatagaaattttatattgaaacttgtacatttaatattaaatataa---aacttttgaataaataa 38812813  T
Q  154 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||| ||||| || ||||||||| || | |||||||||||||||| |  ||| |||||||||||||||||||    
T  38812812 ttgttgttttctaagaaaaagttactactattagttgttttaacatgtacaatgttgcacatgttaaacaaac 38812740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 13322045 - 13321876
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| | |||||||||| || ||||| | || |||| ||||  |||||||||||| ||||||||||||    ||||||| || ||||||    
T  13322045 tcatgtgcaaatttgcatatgttaagaagtttaaaatagaaattttgtattggaatttgtacatttaatattaaatata---aaacttttgaaaaaataa 13321949  T
Q  154 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  ||||||| ||||||||| || | |||||||||||||||| |  ||| |||||||||||| ||||||    
T  13321948 ttgttgtttttcaagaaaaagttactactattagttgttttaacatgtacaatgttgcacatgttagacaaac 13321876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 30172048 - 30171879
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | |||| ||||| |||||||||||   ||| |||||||| ||||||    
T  30172048 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatat---gtagctttttaataaataa 30171952  T
Q  154 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     | || |||| ||||||||| ||| || |||||| ||| ||||||| || ||| |||||||||||| ||||||    
T  30171951 gttttgtttttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 30171879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 30187589 - 30187420
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | |||| ||||| |||||||||||   ||| |||||||| ||||||    
T  30187589 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatat---gtagctttttaataaataa 30187493  T
Q  154 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     | || |||| ||||||||| ||| || |||||| ||| ||||||| || ||| |||||||||||| ||||||    
T  30187492 gttttgtttttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 30187420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 23576423 - 23576591
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  23576423 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtattaaatata---taactttttgttaaataa 23576519  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||||||| || ||| ||||||||   ||||||| || ||||||||| |||||| ||||||    
T  23576520 ttgttggtttcaataaaaacttgttacttttagttaccttaacatgtgcaatattgcagatgttagacaaac 23576591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 223
Target Start/End: Complemental strand, 6754640 - 6754474
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| ||||||||||||| |||   |||  ||||||| || |||    
T  6754640 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattat---gtagatttttaataattaa 6754544  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 223  Q
     ||||  |||||||||||||||| || |||||||||  ||||||| || |||||||||||||||| ||||    
T  6754543 ttgttggtttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaa 6754474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 209
Target Start/End: Complemental strand, 36490941 - 36490795
Alignment:
Q  61 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-a 159  Q
    |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||||||||||| |||| ||||||   ||||||||||| |||||| ||||      
T  36490941 caaatttgcacatgttaagaagtttaaaatagtaactttgcattggaacttgtacattttgtatttaatata---taactttttaataaataattgttgt 36490845  T
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattg 209  Q
    ||||||||||||| ||| || ||||| ||| |||||||| || |||||||    
T  36490844 ttttcaataaaaacttactacttttaattgctttaacatgtgcaatattg 36490795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 223
Target Start/End: Complemental strand, 41624998 - 41624832
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| | ||| |||||| || ||| | |||| ||||| |||  | |||| ||||||||||||| |||   |||  ||||||| || |||    
T  41624998 tcatgtgcaaatttgcatatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattat---gtagatttttaataattaa 41624902  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 223  Q
     ||||  |||||||||||||||| || ||||||||| |||||||| || |||||||||||||||| ||||    
T  41624901 ttgttggtttcaataaaaagttactatttttagttgctttaacatgtgcaatattgcacatgttagacaa 41624832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 6180355 - 6180186
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||  ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  6180355 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgtacatttaatattaaatataa---aacttttaaataaataa 6180259  T
Q  154 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     | | |||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  6180258 ttataattttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 6180186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 39150336 - 39150504
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  ||||||   |||||||||||||||   ||||||||| || ||||||    
T  39150336 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatat---gtaactttt-aataaataa 39150431  T
Q  154 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| || |||||||||||||||| ||||||    
T  39150432 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 39150504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 225
Target Start/End: Original strand, 39627603 - 39627749
Alignment:
Q  77 aagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-attttcaataaaaagtt 175  Q
    ||||| |||||||| ||||||||| ||||  | |||| ||||||||||||||||   |||||||||| || || | | ||||  |||||||| |||||||    
T  39627603 aagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaata---tgtaacttttcaataagtgattgttgtttttcaattaaaagtt 39627699  T
Q  176 attaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
      || ||||||||   ||||||| ||||||||||||||||||| ||||||    
T  39627700 gctatttttagtttccttaacatgtgtaatattgcacatgttagacaaac 39627749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 35512894 - 35512725
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||  ||||  | ||| |||||| ||||||||||||    ||||||| || | ||||    
T  35512894 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgcacatttaatattaaatataa---aacttttgaatatataa 35512798  T
Q  154 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||| ||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  35512797 atgttgttttccaagaaaaagttactactattagttgttttaacatttgcaatgttgcacatgttagacaaac 35512725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 47355403 - 47355544
Alignment:
Q  70 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataa 169  Q
    |||||||||||| || |||||  |||||||| ||||  | |||| |||||||||||||  |||   || |||||| | || ||| |||| ||||||||||    
T  47355403 acatgttaagaaatttaaaataataaatttgtattggaacttgttcattttatattaatgata---tacctttttgataagtaattgttgttttcaataa 47355499  T
Q  170 aaagttattaattttagttgttttaacatatgtaatattgcacat 214  Q
    ||||||  || ||||||||| |||||||| || ||||||||||||    
T  47355500 aaagtttatacttttagttgctttaacatgtgcaatattgcacat 47355544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 7824872 - 7825036
Alignment:
Q  59 tacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt 158  Q
    |||||||||| ||||||||| || || |||||   || |||| | ||  |||||||||||| ||||||||||||    ||||||| || |||||| |||     
T  7824872 tacaaatttgcacatgttaaaaagtttaaaataaaaattttgtaatgaaatttgtacatttaatattaaatataa---aacttttgaataaataattgtg 7824968  T
Q  159 attttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  7824969 gttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 7825036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 22167504 - 22167335
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaacttttt-aacaaata 152  Q
    |||||| |||||||| ||||| |||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    || ||||| || |||||    
T  22167504 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatata----aattttttgaataaata 22167409  T
Q  153 actgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    | |||| |||| ||| ||||||||| || | |||||||||||||||| || ||| ||||||||| || ||||||    
T  22167408 attgttgtttttcaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatggtagacaaac 22167335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 7520022 - 7520164
Alignment:
Q  70 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aata 168  Q
    |||||||||||| || |||||   || |||| ||||  ||||||||||||| |||| ||||||   |||| |||||| |||||| | |||||||  ||||    
T  7520022 acatgttaagaagtttaaaataacaactttgcattgaaatttgtacattttgtatttaatata---taacattttaataaataagtattattttttaata 7520118  T
Q  169 aaaagttattaattttagttgttttaacatatgtaatattgcacat 214  Q
    |||| ||| || ||||||||| |||||||| || ||||||||||||    
T  7520119 aaaatttactacttttagttgctttaacatgtgcaatattgcacat 7520164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 171
Target Start/End: Complemental strand, 52337935 - 52337821
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    ||||| |||| ||||||||||||||||| || ||||| |||||| || ||||| | || |  |||||||||||||||||   ||| ||||||| ||||||    
T  52337935 tcatgaacaagtttgaacatgttaagaagtttaaaatagtaaatatgcattgcaacttatgtattttatattaaatata---taaatttttaataaataa 52337839  T
Q  154 ctgttattttcaataaaa 171  Q
     ||||||| | |||||||    
T  52337838 ttgttattattaataaaa 52337821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 17919622 - 17919454
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||||  |||||| || ||| | |||| ||||| |||  ||||||   |||||||||||||||   ||||||||| || ||||||    
T  17919622 tcatgtgcaaatttgcacataataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatat---gtaactttt-aataaataa 17919527  T
Q  154 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| |  |||||||||||||||| ||||||    
T  17919526 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtacaatattgcacatgttagacaaac 17919454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 5858079 - 5857990
Alignment:
Q  136 taactttttaacaaataactg-ttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 224  Q
    ||||||||||| |||||| |  || |||| ||||||||||| ||| ||||| ||||||||| || |  ||||||||||||||||||||||    
T  5858079 taactttttaataaataattacttgtttttaataaaaagttgttacttttaattgttttaatatgtcaaatattgcacatgttaaacaaa 5857990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 29924356 - 29924429
Alignment:
Q  155 tgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaacaaa 228  Q
    |||||||||||||||||| || ||| ||||||||| |||| ||| |||||  ||||| |||||| |||||||||    
T  29924356 tgttattttcaataaaaaattgttatttttagttgctttagcatgtgtaacgttgcatatgttagacaaacaaa 29924429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 25465327 - 25465276
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattg 105  Q
    |||||| |||||||| |||||||||||| |||||||| ||||||||| ||||    
T  25465327 tcatgtgcaaatttgcacatgttaagaagttcaaaatagtaaatttgcattg 25465276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 225
Target Start/End: Original strand, 34050351 - 34050461
Alignment:
Q  113 tacattttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgca 211  Q
    ||||||||||||| ||||||   ||| ||||| | |||||| |||| |||| |||||| || || ||| |||| |||| |||||||| || |||||||||    
T  34050351 tacattttatatttaatata---taattttttgataaataattgttgtttttcaataataatttgttacttttggttgctttaacatgtgcaatattgca 34050447  T
Q  212 catgttaaacaaac 225  Q
    ||||||| ||||||    
T  34050448 catgttagacaaac 34050461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 44918091 - 44918025
Alignment:
Q  159 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||||||||| ||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  44918091 attttcaataaaaatttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 44918025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 225
Target Start/End: Complemental strand, 3121227 - 3121119
Alignment:
Q  114 acattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcaca 213  Q
    ||||||| |||||||||||   |||||||||   |||||| ||||  |||||||||||| ||  || ||||| ||   ||||||||||||||||||||||    
T  3121227 acattttgtattaaatata---taactttttgttaaataattgttggtttcaataaaaacttgctacttttaattaccttaacatatgtaatattgcaca 3121131  T
Q  214 tgttaaacaaac 225  Q
    | ||| ||||||    
T  3121130 tattagacaaac 3121119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 8062271 - 8062206
Alignment:
Q  159 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 224  Q
    ||||||||| |||||||| || ||||||||   ||||||| |  ||||||||||||||||||||||    
T  8062271 attttcaatgaaaagttactacttttagttaccttaacatgttcaatattgcacatgttaaacaaa 8062206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 33048175 - 33048227
Alignment:
Q  108 atttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt 163  Q
    ||||||| |||||||||||||||||   ||||||||||| |||||| |||||||||    
T  33048175 atttgtatattttatattaaatata---taactttttaataaataattgttatttt 33048227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 35941110 - 35941167
Alignment:
Q  136 taactttttaacaaataactgttattttcaataaaaagttattaattttagttgtttt 193  Q
    ||||||||||| |||||| |||| |||| |||||||||||| || |||||||| ||||    
T  35941110 taactttttaataaataaatgttgtttttaataaaaagttaatacttttagttctttt 35941167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 43317575 - 43317498
Alignment:
Q  140 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtt 217  Q
    ||||||| |||| | |||| ||||||| ||| ||||| || ||||||||| |||||||| |  |||||||||||||||    
T  43317575 tttttaataaatgattgttgttttcaaaaaatagttactacttttagttgctttaacatgtacaatattgcacatgtt 43317498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 50079966 - 50079870
Alignment:
Q  116 attttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcaca 213  Q
    |||||||||||||||   | ||| ||||||| |||||| |  | |||| |||||||||||| || ||||| ||| |||||||||| ||||||||||||    
T  50079966 attttatattaaataatatataattttttaataaataattaatttttttaataaaaagttacta-ttttaattgctttaacatatataatattgcaca 50079870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 51382437 - 51382372
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  51382437 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 51382372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 25956764 - 25956665
Alignment:
Q  108 atttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaata 206  Q
    |||| ||||||| ||||||||||||    ||||||| || |||||| |||| |||| ||| |||||||||||| | ||||||||||||| || || ||||    
T  25956764 atttatacatttaatattaaatataa---aacttttaaataaataattgttgtttttcaagaaaaagttattattattagttgttttaatatgtgcaata 25956668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 62 - 225
Target Start/End: Complemental strand, 2097032 - 2096871
Alignment:
Q  62 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 160  Q
    ||||||| |||||||||||| ||||||||||||| |||| ||||  | |||| ||||||||||||||||||   ||||||||||| |||||| ||||  |    
T  2097032 aaatttgcacatgttaagaagttcaaaatggtaagtttgtattggaacttgtgcattttatattaaatata---taactttttaataaataattgttgtt 2096936  T
Q  161 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||||||||| | | ||||||||| |||||| | || |||||||||||||||| ||||||    
T  2096935 tttcaataaaaagttgtcacttttagttgatttaacttgtgcaatattgcacatgttagacaaac 2096871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 24685006 - 24684836
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  24685006 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtacatttaatattaaatataa---aacttttgaataaataa 24684910  T
Q  154 ctgttattttc--aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||| |||||  || ||||||||| || | |||||||||||||||| |||||| ||||| |||||||||||||    
T  24684909 ttgttgttttccaaaaaaaaagttactactattagttgttttaacatgtgtaatgttgcaaatgttaaacaaac 24684836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 9759151 - 9759319
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    ||||||||||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  9759151 tcatgtacaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaagttgaacattttgtattaaatata---taactttttgttaaataa 9759247  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  9759248 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 9759319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 225
Target Start/End: Complemental strand, 19468361 - 19468194
Alignment:
Q  56 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 155  Q
    |||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |    
T  19468361 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataa---aacttttgaataaataatt 19468265  T
Q  156 gttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||| ||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  19468264 gttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 19468194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 223
Target Start/End: Original strand, 19450911 - 19451076
Alignment:
Q  56 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 155  Q
    |||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |    
T  19450911 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttgaataaataatt 19451007  T
Q  156 gttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 223  Q
    ||| |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||    
T  19451008 gttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaa 19451076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 16667393 - 16667562
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || |||||| ||| ||| | |||  | ||||  ||||||||||||||||   ||| |||||||| ||||||    
T  16667393 tcatgtgcaaatttgcacatgttaagaagtttaaaatgataattttaacttgaaacttgtgtattttatattaaatat---gtagctttttaataaataa 16667489  T
Q  154 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||| |||| |||| |||| ||| || |||||| ||| ||||||| || ||| |||||||||||| ||||||    
T  16667490 gtgttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 16667562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 225
Target Start/End: Complemental strand, 50352464 - 50352303
Alignment:
Q  61 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 160  Q
    |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   |||||| ||||      
T  50352464 caaatttgcacatgttaagaaatttaaaatagtaattttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataattgttgg 50352368  T
Q  161 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  50352367 tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 50352303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 17409993 - 17409824
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaacttttt-aacaaata 152  Q
    |||||| |||||||| ||||| |||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    || ||||| || |||||    
T  17409993 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatata----aattttttgaataaata 17409898  T
Q  153 actgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    | |||| |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  17409897 attgttgtttttcaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 17409824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 223
Target Start/End: Complemental strand, 49181241 - 49181074
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| || ||||||||| |||||||| ||||||||| ||||  | |||| ||||||||||||||||   |||||||||| || |||| |    
T  49181241 tcatgtgcaaatttgcacctgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaata---tgtaacttttcaataaatga 49181145  T
Q  154 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 223  Q
     ||||  |||||||| ||| |||  || ||||||||   ||||||| || |||||||||||| ||| ||||    
T  49181144 ttgttgtttttcaattaaaggttgctacttttagtttccttaacatgtgcaatattgcacattttagacaa 49181074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 7349794 - 7349689
Alignment:
Q  117 ttttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatg 215  Q
    |||||||||||||||   ||||||||| ||||||||| ||||  |||||||| ||||||||||| |||||||||  ||||||| || |||||||||| ||    
T  7349794 ttttatattaaatat---gtaactttt-aacaaataattgttggttttcaatgaaaagttattacttttagttgccttaacatgtgcaatattgcacgtg 7349699  T
Q  216 ttaaacaaac 225  Q
    ||| ||||||    
T  7349698 ttagacaaac 7349689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 10813587 - 10813658
Alignment:
Q  141 ttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgca 211  Q
    ||||||||||||| ||||  |||||||||||||||||||| |||||||||  |||||||||| |||||||||    
T  10813587 ttttaacaaataattgttggttttcaataaaaagttattacttttagttgccttaacatatgcaatattgca 10813658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 225
Target Start/End: Complemental strand, 40049725 - 40049559
Alignment:
Q  56 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 155  Q
    |||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||  ||||||| |||||||||||   ||| |||||   |||||| |    
T  40049725 atgtgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaactttaacattttttattaaatata---taattttttgttaaataatt 40049629  T
Q  156 gttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||  |||| ||||||| ||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  40049628 gttggtttctataaaaacttactacttttagttactttaacatgtgcaatattgcacatgttagacaaac 40049559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 225
Target Start/End: Original strand, 8736828 - 8736988
Alignment:
Q  62 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 161  Q
    ||||||| |||||||||||| || ||| |||||| ||||| |||  | | || ||||| |||||||||||   |||||||||||| |||||| | || ||    
T  8736828 aaatttgcacatgttaagaaatttaaagtggtaactttgacttggaact-gtgcatttcatattaaatat---gtaactttttaataaataagttttgtt 8736923  T
Q  162 tt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    || ||||||||| ||| || |||||| ||| ||||||| || ||| |||||||||||| ||||||    
T  8736924 tttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaac 8736988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 23545645 - 23545476
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||||||||| || || |||||   || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  23545645 tcatgtgcaaatttgcacatgttaataagtttaaaatataaattttgtattggaaattgtacatttaatattaaatataa---aacttttgaataaataa 23545549  T
Q  154 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||| |||| ||| ||||| ||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  23545548 ttgttgtttttcaagaaaaaattactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 23545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 27019429 - 27019260
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| | ||||||| || || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  27019429 tcatgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataa---aacttttgaataaataa 27019333  T
Q  154 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||| ||||| || ||||||||| || | |||||||||||||||| || ||| ||||||| |||| ||||||    
T  27019332 ttgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacacgttagacaaac 27019260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 34941447 - 34941278
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| | |||||| ||||| |||||| || ||||| |||| |||| ||||  | ||||||||||| |||| ||||||   ||||||||||| |||||     
T  34941447 tcatgtgcgaatttgcacatgataagaagtttaaaatagtaattttgcattggaacttgtacattttgtatttaatata---taactttttaataaatag 34941351  T
Q  154 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||| |||| |||||||||||| ||| ||||||||   |||| || || |||||| ||||||||| ||||||    
T  34941350 ttgttgtttttcaataaaaagttgttacttttagttaccttaatatgtgcaatattacacatgttagacaaac 34941278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 188
Target Start/End: Original strand, 37784877 - 37785001
Alignment:
Q  62 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 160  Q
    ||||||| |||||||||||| |||||||| ||||||||  ||||  |||||| |||||||| |||||||   ||||||||||||| |||| | | ||  |    
T  37784877 aaatttggacatgttaagaagttcaaaatagtaaatttatattgtaatttgtgcattttatgttaaata---tgtaactttttaataaatgattattgtt 37784973  T
Q  161 tttcaataaaaagttattaattttagtt 188  Q
    |||||||||||||||  || ||||||||    
T  37784974 tttcaataaaaagttgctacttttagtt 37785001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 6875608 - 6875501
Alignment:
Q  116 attttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacat 214  Q
    |||||||||||||| ||   |||||||| || |||||| || ||||||| |||||||  ||| || |||||||||||||||||| || ||||||||| ||    
T  6875608 attttatattaaattta---taacttttcaataaataattgatattttccaataaaatattactatttttagttgttttaacatgtgcaatattgcaaat 6875512  T
Q  215 gttaaacaaac 225  Q
    |||| ||||||    
T  6875511 gttagacaaac 6875501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 25843406 - 25843291
Alignment:
Q  109 tttgtacattttatattaaatatagtgtaa-ctttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaata 206  Q
    ||||| ||||||||||||||||||   ||| |||||||||||||   ||||  ||||||||||||||||| || ||||||||| |||||||| | | |||    
T  25843406 tttgtgcattttatattaaatata---taagctttttaacaaatggttgttgtttttcaataaaaagttactacttttagttgctttaacatgtattata 25843310  T
Q  207 ttgcacatgttaaacaaac 225  Q
    ||| |||||||| ||||||    
T  25843309 ttgtacatgttagacaaac 25843291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 210
Target Start/End: Complemental strand, 27362560 - 27362406
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  |||||| ||||| ||||||||||   |||| |||||| | ||||||    
T  27362560 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaatttgtgcatttcatattaaata---tgtagctttttgataaataa 27362464  T
Q  154 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgc 210  Q
     | ||  ||||||||||||| ||| || |||||| | | |||||||||| ||| ||||    
T  27362463 gttttgtttttcaataaaaaattactacttttagatatcttaacatatgcaatgttgc 27362406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 225
Target Start/End: Complemental strand, 52391459 - 52391298
Alignment:
Q  62 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 160  Q
    ||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| ||||  |    
T  52391459 aaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttgaataaataattgttgtt 52391363  T
Q  161 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||| ||||||||| || | |||||| ||||||||| || || ||| ||||| ||| ||||||    
T  52391362 tttcaaaaaaaagttactactattagttattttaacatgtgcaacattacacatattagacaaac 52391298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 54495646 - 54495815
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||| | |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  54495646 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttaacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 54495742  T
Q  154 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     | ||  ||||||| ||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  54495743 gttttgtttttcaaaaaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 54495815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 10389380 - 10389445
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||| |||||||| || ||||||||  | |||||| ||||||||||||||||||| ||||||    
T  10389380 ttttcaattaaaagttaatacttttagttactataacatgtgtaatattgcacatgttagacaaac 10389445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 33632267 - 33632379
Alignment:
Q  110 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatatt 208  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| |||| ||| ||||||||| || | ||||||||||| |||| | |||| ||    
T  33632267 ttgtacatttaatattaaatataa---aacttttgaataaataattgttgtttttcaaaaaaaagttactactattagttgtttttacatgtataatgtt 33632363  T
Q  209 gcacatgttaaacaaa 224  Q
    |||||||||| |||||    
T  33632364 gcacatgttagacaaa 33632379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 40682017 - 40681960
Alignment:
Q  157 ttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacat 214  Q
    |||||||||||||||| ||| || |||||||||  |||||||||| ||||||||||||    
T  40682017 ttattttcaataaaaaattactatttttagttgacttaacatatgcaatattgcacat 40681960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 49228422 - 49228357
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||| |||||||| || ||||||||   |||||||||| |||||||||||||||| ||||||    
T  49228422 ttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgcacatgttagacaaac 49228357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 169
Target Start/End: Complemental strand, 1378178 - 1378075
Alignment:
Q  63 aatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattt 162  Q
    |||||| |||||||||||| || ||||||||||||||   |||  | |||||||||| ||||||||||||   |||| |||||| |||||| || | |||    
T  1378178 aatttgcacatgttaagaaatttaaaatggtaaatttatcttgaaacttgtacatttaatattaaatata---taacattttaataaataattgatgttt 1378082  T
Q  163 tcaataa 169  Q
    |||||||    
T  1378081 tcaataa 1378075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 19838756 - 19838866
Alignment:
Q  110 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattg 209  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| |||  || |||||||||||| | |||||||||||||||| || ||| ||     
T  19838756 ttgtacatttaatattaaatataa---aacttttgaataaataattgttgtttaaaa-aaaaagttattactattagttgttttaacatgtgcaatgttc 19838851  T
Q  210 cacatgttaaacaaa 224  Q
    ||||||||| |||||    
T  19838852 cacatgttagacaaa 19838866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 212
Target Start/End: Complemental strand, 39876991 - 39876844
Alignment:
Q  62 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 161  Q
    ||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| ||| |||||||   |||||||||   |||||| ||||  |    
T  39876991 aaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtatcaaatata---taactttttgttaaataattgttggt 39876895  T
Q  162 ttcaataaaaagttattaattttagttgttttaacatatgtaatattgcac 212  Q
    ||||||||||| ||| || ||||||||   ||||||| || ||||||||||    
T  39876894 ttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcac 39876844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 45742431 - 45742368
Alignment:
Q  162 ttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  45742431 ttcaagaaaaagttaatactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 45742368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 169
Target Start/End: Complemental strand, 55814026 - 55813920
Alignment:
Q  61 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-a 159  Q
    |||||||| ||||||||| || || |||||  ||| |||| ||||  ||||||||||| | |||||||||||   ||||||||||| |||||| |||| |    
T  55814026 caaatttgcacatgttaaaaagtttaaaataataattttgtattgaaatttgtacattctgtattaaatata---taactttttaataaataattgttga 55813930  T
Q  160 ttttcaataa 169  Q
    ||||||||||    
T  55813929 ttttcaataa 55813920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 201
Target Start/End: Original strand, 13009820 - 13009909
Alignment:
Q  110 ttgtacattttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatg 201  Q
    ||||| ||||| |||||||||||   || |||||||  |||||| | ||| ||||||||||||| ||| || |||||||||||||||||||||    
T  13009820 ttgtatattttgtattaaatata---tagctttttagtaaataattattagttttcaataaaaacttaatacttttagttgttttaacatatg 13009909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 47326901 - 47327070
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | || | ||||| ||||||||||   ||||  ||||||| ||||||    
T  47326901 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaata---tgtagttttttaataaataa 47326997  T
Q  154 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     | ||  |||||||| |||| ||| || |||||| ||| ||||||| || ||| ||||||| |||| ||||||    
T  47326998 gttttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacaggttagacaaac 47327070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 47341697 - 47341866
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | || | ||||| ||||||||||   ||||  ||||||| ||||||    
T  47341697 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaata---tgtagttttttaataaataa 47341793  T
Q  154 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     | ||  |||||||| |||| ||| || |||||| ||| ||||||| || ||| ||||||| |||| ||||||    
T  47341794 gttttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacaggttagacaaac 47341866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 49332423 - 49332333
Alignment:
Q  136 taactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||||| |||||| |  |||||| |||| ||||||||||| ||||| ||   ||||||| || |||||||||||||||| ||||||    
T  49332423 taactttttaataaataattaatatttttcaatgaaaagttattacttttaattaccttaacatgtgaaatattgcacatgttagacaaac 49332333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 10658544 - 10658621
Alignment:
Q  148 aaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||| ||||  |||||||||||| ||  || ||||||||   ||||||| ||||||||||||||||||| ||||||    
T  10658544 aaataattgttggtttcaataaaaacttgctacttttagttaccttaacatgtgtaatattgcacatgttagacaaac 10658621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 10872689 - 10872766
Alignment:
Q  148 aaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||| ||||  |||||||||||| ||  || ||||||||   ||||||| ||||||||||||||||||| ||||||    
T  10872689 aaataattgttggtttcaataaaaacttgctacttttagttaccttaacatgtgtaatattgcacatgttagacaaac 10872766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 224
Target Start/End: Complemental strand, 51691502 - 51691343
Alignment:
Q  62 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtta-t 160  Q
    ||||||| |||||||||||| ||  |||| |||| |||| ||||  | ||||| |||||  ||||||||||   || |||||||| |||||| | ||| |    
T  51691502 aaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgaattaaatata---tagctttttaataaataattattagt 51691406  T
Q  161 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 224  Q
    |||||||||| | ||| | |||||||||| |||||||| || ||| |||||||| ||| |||||    
T  51691405 tttcaataaagacttact-attttagttgctttaacatgtgcaatgttgcacattttagacaaa 51691343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 3728317 - 3728249
Alignment:
Q  158 tattttcaataaaaa-gttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||||||||| |||| || ||||||||||| |||||| |  ||||||| |||||||| ||||||    
T  3728317 tattttcaataaaaaagttactacttttagttgttataacatgttcaatattgtacatgttagacaaac 3728249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 18882276 - 18882352
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaata 130  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||    
T  18882276 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaata 18882352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 35645071 - 35645126
Alignment:
Q  115 cattttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaa 172  Q
    ||||||||||||||||||   ||||||||||| |||||| ||||| |||||||||||||    
T  35645071 cattttatattaaatata---taactttttaataaataattgttatttttcaataaaaa 35645126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 115 - 225
Target Start/End: Complemental strand, 42750396 - 42750289
Alignment:
Q  115 cattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacat 214  Q
    ||||||||||||||   | ||||||||||||| |||||| | || |||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  42750396 cattttatattaaa---attgtaactttttaataaataattattgttttcaataaaaagttattatttttagttgctttaacatatgcaatattgcacat 42750300  T
Q  215 gttaaacaaac 225  Q
    |||||||||||    
T  42750299 gttaaacaaac 42750289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 47457470 - 47457638
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||||||||| || || ||| | |||| ||||| |||  |||| | |||||||||||| ||   ||||| ||||| || ||||||    
T  47457470 tcatgtgcaaatttgcacatgttaaaaaatttaaagtagtaactttgacttggaatttatgcattttatattatat---gtgtagcttttaaataaataa 47457566  T
Q  154 ctgttattttcaataaaaag-ttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 224  Q
     ||||||||||||||||||  ||| || |||||||||||||||||| || |||||||||||||||| |||||    
T  47457567 ttgttattttcaataaaaaaattactacttttagttgttttaacatgtgcaatattgcacatgttagacaaa 47457638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 226
Target Start/End: Complemental strand, 26300740 - 26300572
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    ||||||||||||||| ||||||||| || || ||||| |||| |||||||||  | ||||| ||||| |||||||| ||   ||||||||||| || |      
T  26300740 tcatgtacaaatttgcacatgttaaaaagtttaaaatagtaactttgaattgaaacttgtatattttgtattaaatgta---taactttttaataatttt 26300644  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaaca 226  Q
     | || ||||||||| | | ||| || ||||||||||||||||||||| |||||| ||||||||| |||||||    
T  26300643 ttttt-ttttcaatacagaattaatacttttagttgttttaacatatgcaatattacacatgttagacaaaca 26300572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 24462964 - 24463132
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || |||||  ||| ||||| ||    ||||||||||||||||||||||   ||||  ||||||| |||||     
T  24462964 tcatgtgcaaatttgcacatgttaagaagtttaaaataataactttgacttaaagtttgtacattttatattaaata---tgtagttttttaataaatac 24463060  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||| |||||||||| || ||| || |||||||||  ||||||| || |||||| ||||||||| ||||||    
T  24463061 ttgttgttttcaataagaaattactacttttagttgccttaacatgtgaaatatttcacatgttagacaaac 24463132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 33343157 - 33342989
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  33343157 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgtattggaacttgaacattttgtattaaatata---taactttttgttaaataa 33343061  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  33343060 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 33342989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 223
Target Start/End: Complemental strand, 7170171 - 7170005
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| ||||||||||||| |||   |||  ||||||| || |||    
T  7170171 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattat---gtagatttttaataattaa 7170075  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 223  Q
     ||||  |||||||||||||||| || |||||||||  ||||||| || |||||||||||||||| ||||    
T  7170074 ttgttggtttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaa 7170005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 218
Target Start/End: Original strand, 25709408 - 25709570
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | |||| ||||| ||||||||||    ||| |||||||| |||| |    
T  25709408 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtattggaacttgttcatttcatattaaata---ggtagctttttaataaatta 25709504  T
Q  154 ctgttattt-tcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtta 218  Q
     |||| ||| |||||||||| ||| || ||||||||| |||||||| || |||||| |||||||||    
T  25709505 ttgttgtttatcaataaaaaattactacttttagttgatttaacatgtgcaatatttcacatgtta 25709570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 46290179 - 46290011
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  46290179 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 46290083  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || ||| |||||||||||| ||||||    
T  46290082 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaattttgcacatgttagacaaac 46290011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 4969942 - 4969773
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  4969942 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttaaataaataa 4969846  T
Q  154 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     | |  |||| ||| |||||| || || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  4969845 ttatagttttccaagaaaaagctactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 4969773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 19889509 - 19889341
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||||||| || ||||||    
T  19889509 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatat---gtaactttt-aataaataa 19889414  T
Q  154 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| || |||||||||||||||| ||||||    
T  19889413 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 19889341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 19868221 - 19868114
Alignment:
Q  116 attttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacat 214  Q
    |||||||||||||||||   ||||||||| | |||||| || | |||| |||| |||| ||| || |||||||||| ||||||| || ||||||||||||    
T  19868221 attttatattaaatata---taactttttgataaataattggtgtttttcaatgaaaatttactacttttagttgtcttaacatgtgcaatattgcacat 19868125  T
Q  215 gttaaacaaac 225  Q
    |||| ||||||    
T  19868124 gttagacaaac 19868114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 34270430 - 34270266
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  34270430 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 34270334  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||||||| ||     ||||||||   ||||||| || |||||||||||||||| ||||||    
T  34270333 ttgttggtttcaataaaaactt----cttttagttaccttaacatgtgcaatattgcacatgttagacaaac 34270266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19017882 - 19017925
Alignment:
Q  1 ttcattagataattttatttgatgatgttttattgttggtataa 44  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||    
T  19017882 ttcattagatagttttatttgatgatgttttattgttagtataa 19017925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 9332130 - 9331962
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||| ||| | ||| |||    
T  9332130 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatat---gtaacatttaatcaa-taa 9332035  T
Q  154 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||| ||||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  9332034 ttgttgattttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 9331962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 23982764 - 23982933
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||| |||||||| || ||| | |||| ||||| |||  | ||||  ||||||||||||||||    ||| ||||||| || |||    
T  23982764 tcatgtgcaaatttgcacacgttaagaaatttaaagtagtaactttgacttggaacttgtgtattttatattaaatatt---taagtttttaataattaa 23982860  T
Q  154 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||| ||| |||||||| || |||||||||  ||||||| | ||||||||||||||||| ||||||    
T  23982861 ttgttggttttgaatgaaaagttactacttttagttgccttaacatgtataatattgcacatgttagacaaac 23982933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 33072150 - 33072072
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 132  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  ||||| ||||||| |||||||||||    
T  33072150 tcatgtgcaaatttgtacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatata 33072072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 36548469 - 36548636
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| ||   |||||||  |||||||||||||||   |||| | |||||  |||||    
T  36548469 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttaaaatttgtattttttatattaaatat---gtaa-tatttaatcaataa 36548564  T
Q  154 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 224  Q
     ||||  ||||||||||||| ||| || ||||||||   ||||||| || |||||||||||||||| |||||    
T  36548565 ttgttggttttcaataaaaaattactacttttagttcccttaacatgtgcaatattgcacatgttagacaaa 36548636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 225
Target Start/End: Original strand, 47707911 - 47708065
Alignment:
Q  72 atgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-attttcaataaa 170  Q
    |||||||||| || ||||| |||| |||||||||  | || |||||||| |||||||||||   ||||||||||| |||||| ||||  ||||| |||||    
T  47707911 atgttaagaagtttaaaatagtaattttgaattgaaacttatacattttgtattaaatata---taactttttaataaataattgttgtttttccataaa 47708007  T
Q  171 aagttattaattt---tagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |  || ||| |||   ||||||||||||||| ||||| |||||| ||| || ||||||    
T  47708008 atcttgttacttttagtagttgttttaacatgtgtaacattgcatatgatagacaaac 47708065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 3530177 - 3530264
Alignment:
Q  108 atttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacat 198  Q
    |||||| |||||||||| |||||||   ||| ||||||| |||||| |||| ||||||||||||| |||||| | ||| ||| ||||||||    
T  3530177 atttgtgcattttatatcaaatata---taattttttaataaataattgttgttttcaataaaaaattattattcttaattgctttaacat 3530264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 198
Target Start/End: Original strand, 8091321 - 8091463
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||  |||||||||||| || ||||| |||| |||| ||||  | || |||||||| | |||||||||   ||||||||||| ||||||    
T  8091321 tcatgtgcaaatttacacatgttaagaagtttaaaatagtaactttgcattgtaacttttacattttgtgttaaatata---taactttttaataaataa 8091417  T
Q  154 ctgtt-attttcaataaaaagttattaattttagttgttttaacat 198  Q
     | || |||||||||||||| ||  || ||||||||| ||| ||||    
T  8091418 ttattgattttcaataaaaatttgctacttttagttgctttgacat 8091463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 26050470 - 26050516
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttg 100  Q
    |||||| |||||||| |||||||||||| || |||||||||||||||    
T  26050470 tcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttg 26050516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 26059829 - 26059875
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttg 100  Q
    |||||| |||||||| |||||||||||| || |||||||||||||||    
T  26059829 tcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttg 26059875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 29398143 - 29398221
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 132  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    
T  29398143 tcatgttcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata 29398221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 24250379 - 24250314
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  24250379 ttttcaatgaaaagttaatacttttagtttccttaacatgtgcaatattgcacatgttagacaaac 24250314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 29398227 - 29398292
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||| |||| ||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  29398227 ttttcaatgaaaaattagtattattagttgttttaacatgtgcaatgttgcacatgttagacaaac 29398292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 12650911 - 12650831
Alignment:
Q  136 taactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatg 215  Q
    ||||||||||| |||||| || || |||||||| |||||||| || |||||||||  ||||||| |  |||||||||||||    
T  12650911 taactttttaataaataattggtagttttcaatgaaaagttactatttttagttggcttaacatgtacaatattgcacatg 12650831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 26682237 - 26682068
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | |||| |||||||||||||||   ||||| |||||||| ||||||    
T  26682237 tcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaat---gtgtagctttttaataaataa 26682141  T
Q  154 ctgttattttcaataaaaag-ttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||| |||||||||||||  ||| || |||||||||||||||||| || |||||||||||||||| ||||||    
T  26682140 ttgttgttttcaataaaaaaattactacttttagttgttttaacatgtgcaatattgcacatgttagacaaac 26682068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 6818186 - 6818017
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| ||||| ||| || |  | |||| ||||||||||||| ||||    |||||||||| ||||||    
T  6818186 tcatgtgcaaatttgtacatgttaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataa---aactttttaataaataa 6818090  T
Q  154 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||| |||| ||||  ||||||| || ||||||||  ||||||||||  |||||||||||||||| ||||||    
T  6818089 ttgttctttttcaatgtaaagttactatttttagttcctttaacatatacaatattgcacatgttagacaaac 6818017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 31812282 - 31812113
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||| ||||||| || |||||||||| ||||| |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  31812282 tcatgtgcaaatttgcacatattaagaagtttaaaatggtaattttgacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 31812186  T
Q  154 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     | ||| ||||||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  31812185 gttttatttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 31812113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 3306064 - 3306232
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| ||| |||||||   |||||||||   ||||||    
T  3306064 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtatcaaatata---taactttttgttaaataa 3306160  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||||||| ||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  3306161 ttgttggtttcaataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 3306232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 20514802 - 20514632
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| || ||||| ||| |||||||| || |||||||||| ||||  |||  | |||||||||||||||||||||||   ||||||||||| ||||||    
T  20514802 tcatgtgcatatttgcacaggttaagaaatttaaaatggtaagtttgtcttggaacttgtacattttatattaaatata---taactttttaataaataa 20514706  T
Q  154 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaata-ttgcacatgttaaacaaac 225  Q
     || || |||||||||| || ||| || ||| ||||| |||| ||| || |||| |||||||||||| ||||||    
T  20514705 ttggtatttttcaataagaaattactactttaagttgctttaccatgtgcaatatttgcacatgttagacaaac 20514632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 2161556 - 2161388
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| |||||||  ||||||||||   |||||||||   ||||||    
T  2161556 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgaattaaatata---taactttttgttaaataa 2161460  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  2161459 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 2161388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 7750733 - 7750668
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||||||||||  || |||||||||||||||||| || |||||||||||||||| ||||||    
T  7750733 ttttcaataaaaagttgctacttttagttgttttaacatgtgcaatattgcacatgttagacaaac 7750668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 225
Target Start/End: Complemental strand, 12132145 - 12131983
Alignment:
Q  61 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgt-ta 159  Q
    |||| ||| |||||||||||| || ||| | |||| |||| ||||  | ||| |||||||||||||||||||   ||||||||||| |||||  |||       
T  12132145 caaacttgcacatgttaagaaatttaaagtagtaagtttgtattggaacttgaacattttatattaaatata---taactttttaataaatacttgtggt 12132049  T
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||||||||||  || ||||||||  |||||||| || ||| |||||||||||| ||||||    
T  12132048 ttttcaataaaaagttgctacttttagtttctttaacatgtgcaatgttgcacatgttagacaaac 12131983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 9580118 - 9580287
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||  |||||||||||| || ||||| | || |||| ||||  | |||||||||| |||||||||||| | |   |||| || ||||||    
T  9580118 tcatgtgcaaatttacacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataattt---ttttgaataaataa 9580214  T
Q  154 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||| |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||| ||| ||||||    
T  9580215 ttgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatattagacaaac 9580287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 225
Target Start/End: Original strand, 14816198 - 14816303
Alignment:
Q  118 tttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 216  Q
    ||||||||||||||   |||| ||||||| || ||| ||||  ||||||||||||||||| || ||||||||  |||||||| || ||||||||||||||    
T  14816198 tttatattaaatat---gtaaatttttaataattaattgttggttttcaataaaaagttactacttttagtttctttaacatgtgcaatattgcacatgt 14816294  T
Q  217 taaacaaac 225  Q
    || ||||||    
T  14816295 tagacaaac 14816303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 225
Target Start/End: Complemental strand, 14829542 - 14829437
Alignment:
Q  118 tttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 216  Q
    ||||||||||||||   |||| ||||||| || ||| ||||  ||||||||||||||||| || ||||||||  |||||||| || ||||||||||||||    
T  14829542 tttatattaaatat---gtaaatttttaataattaattgttggttttcaataaaaagttactacttttagtttctttaacatgtgcaatattgcacatgt 14829446  T
Q  217 taaacaaac 225  Q
    || ||||||    
T  14829445 tagacaaac 14829437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 225
Target Start/End: Complemental strand, 38843817 - 38843704
Alignment:
Q  110 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatatt 208  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| ||||| || ||||||||| || | |||||||||||||||| || ||| ||    
T  38843817 ttgtacatttaatattaaatataa---aacttttgaataaataattgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgtt 38843721  T
Q  209 gcacatgttaaacaaac 225  Q
    |||||||||| ||||||    
T  38843720 gcacatgttagacaaac 38843704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 11923080 - 11923015
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||||||||||||| | ||| |||||||||||| | || |||||||||||||||| ||||||    
T  11923080 ttttcaataaaaagttatcattttcagttgttttaacttgtgcaatattgcacatgttagacaaac 11923015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 38527886 - 38527821
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||| ||||||||||| |||||||||  ||||||| || |||||||||||||||| ||||||    
T  38527886 ttttcaatgaaaagttattacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 38527821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 189
Target Start/End: Original strand, 39024866 - 39024998
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  |||||| ||||||||||||| ||   ||||  ||||||| || |||    
T  39024866 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgcattttatattaacta---tgtagatttttaataattaa 39024962  T
Q  154 ctgttattttcaataaaaagttattaattttagttg 189  Q
     ||||  ||||||||||||||||||| |||||||||    
T  39024963 ttgttggtttcaataaaaagttattacttttagttg 39024998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 12189597 - 12189766
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaacttttt-aacaaata 152  Q
    |||||| |||||||| ||||| |||||| || ||||| | || |||  ||||  | |||||||||| ||||||||||||    || ||||| || |||||    
T  12189597 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatata----aattttttgaataaata 12189692  T
Q  153 actgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    | |||| |||| ||| ||||||||| || | |||||||||||||||| || |||  ||||||||||||||||||    
T  12189693 attgttgtttttcaagaaaaagttaatactcttagttgttttaacatgtgcaatgctgcacatgttaaacaaac 12189766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 12434025 - 12434194
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaacttttt-aacaaata 152  Q
    |||||| |||||||| ||||| |||||| || ||||| | || |||  ||||  | |||||||||| ||||||||||||    || ||||| || |||||    
T  12434025 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatata----aattttttgaataaata 12434120  T
Q  153 actgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    | |||| |||| ||| ||||||||| || | |||||||||||||||| || |||  ||||||||||||||||||    
T  12434121 attgttgtttttcaagaaaaagttaatactcttagttgttttaacatgtgcaatgctgcacatgttaaacaaac 12434194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 196
Target Start/End: Original strand, 34741730 - 34741813
Alignment:
Q  110 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaac 196  Q
    |||| ||||||||||||||||||   ||| ||||||| |||||| | || |||||||| ||||||| ||| ||||||||||||||||    
T  34741730 ttgtgcattttatattaaatata---taattttttaataaataattattgttttcaattaaaagttgttatttttagttgttttaac 34741813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 225
Target Start/End: Original strand, 8284660 - 8284747
Alignment:
Q  139 ctttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||| |||||| |||| ||||  |||||||||||| || ||||||||| |||||||| || |||| ||||||||||| ||||||    
T  8284660 ctttttaataaataattgttcttttttaataaaaagttactacttttagttgctttaacatgtgcaatactgcacatgttagacaaac 8284747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 225
Target Start/End: Complemental strand, 45006131 - 45005970
Alignment:
Q  61 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 160  Q
    |||||||| |||||||||||| || ||||| | || |||| ||||  |  ||||||| | ||||||||||||    ||||||| || |||||| |||| |    
T  45006131 caaatttgcacatgttaagaagtttaaaatag-aattttgtattggaacatgtacatctaatattaaatataa---aacttttgaataaataattgttgt 45006036  T
Q  161 tttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  45006035 tttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 45005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 5298157 - 5298077
Alignment:
Q  140 tttttaacaaataactgttattttcaataaaaag---ttattaattttagttgttttaacatatgtaatattgcacatgtt 217  Q
    ||||||| |||||| |||| |||||||||||||    || ||| ||||||| |||||||||| ||||||||||||||||||    
T  5298157 tttttaataaataattgttgttttcaataaaaaaaatttgttagttttagtagttttaacatgtgtaatattgcacatgtt 5298077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 13327950 - 13328118
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||| ||| | ||| |||    
T  13327950 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatat---gtaacatttaatcaa-taa 13328045  T
Q  154 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||| |||||||| || ||||||||   |||||||||| |||||||||||||||| ||||||    
T  13328046 ttgttggttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgcacatgttagacaaac 13328118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 225
Target Start/End: Original strand, 35678347 - 35678452
Alignment:
Q  118 tttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 216  Q
    ||||||||||||||   |||| ||||||| || ||| ||||  |||||||| |||||||| || ||||||||  |||||||| || ||||||||||||||    
T  35678347 tttatattaaatat---gtaaatttttaataattaattgttggttttcaatgaaaagttactacttttagtttctttaacatgtgcaatattgcacatgt 35678443  T
Q  217 taaacaaac 225  Q
    || ||||||    
T  35678444 tagacaaac 35678452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 36967079 - 36967248
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | ||| |||||| ||||||||||||    ||||||| || | ||||    
T  36967079 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaactttgtattgaaacttgcacatttaatattaaatata---aaacttttgaatatataa 36967175  T
Q  154 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||| |||| ||| ||||||||| || | |||||||| ||||||| |  ||| |||||||||||| ||||||    
T  36967176 ttgttgttttccaagaaaaagttactactattagttgtcttaacatgtacaatgttgcacatgttagacaaac 36967248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 7140571 - 7140636
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||||||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  7140571 ttttcaataaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 7140636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 9825024 - 9824959
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||||||||||| |||||||| |||  |||||||||  ||||||||| |||||| ||||||    
T  9825024 ttttcaataaaaagttactaattttaattgcattaacatatacaatattgcatatgttagacaaac 9824959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 16445801 - 16445893
Alignment:
Q  111 tgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaat 205  Q
    ||||||||| ||||||||||||    ||||||| || |||||| |||| ||||| || ||||||||| || | |||||||||||||||||||||||    
T  16445801 tgtacatttaatattaaatataa---aacttttgaataaataattgttgttttccaagaaaaagttactactattagttgttttaacatatgtaat 16445893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 40210933 - 40210998
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||| |||||||| || ||||||||   |||||||||| |||||||||||||||| ||||||    
T  40210933 ttttcaatgaaaagttaatacttttagttaccttaacatatgcaatattgcacatgttagacaaac 40210998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 11947016 - 11947076
Alignment:
Q  164 caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 224  Q
    |||||||||||||| | |||||||||||||||| | || ||||||| |||||||| |||||    
T  11947016 caataaaaagttatcatttttagttgttttaacttgtgcaatattgtacatgttagacaaa 11947076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 9743967 - 9743862
Alignment:
Q  117 ttttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatg 215  Q
    |||||||||||||||   ||||||||| || |||||| ||||  ||||||||||||| ||| || |||||||||| |||||||    |||||||||||||    
T  9743967 ttttatattaaatat---gtaactttt-aataaataattgttggttttcaataaaaaattactacttttagttgtcttaacatgcacaatattgcacatg 9743872  T
Q  216 ttaaacaaac 225  Q
    ||| ||||||    
T  9743871 ttagacaaac 9743862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 218
Target Start/End: Original strand, 10974619 - 10974725
Alignment:
Q  110 ttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatatt 208  Q
    |||||||||||||||||||||   ||||| ||||||| |||||  | ||  |||||||||||| |||| || ||||||||| ||||||||||  |||| |    
T  10974619 ttgtacattttatattaaata---tgtaattttttaataaatagttattgtttttcaataaaatgttactacttttagttgctttaacatatacaatagt 10974715  T
Q  209 gcacatgtta 218  Q
    ||| ||||||    
T  10974716 gcatatgtta 10974725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 223
Target Start/End: Original strand, 28014867 - 28015032
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  28014867 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttgaataaataa 28014963  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 223  Q
     |||| |||| || ||||||||| |    | |||| ||||||| | ||||| ||||||||||||| ||||    
T  28014964 ttgttgtttt-aaaaaaaagttactgcaataagttattttaacttgtgtaacattgcacatgttagacaa 28015032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 2083078 - 2083156
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 132  Q
    |||||| |||||||  |||| ||||||| ||||||||   ||||||| ||||  |||||| ||||||||||||||||||    
T  2083078 tcatgtgcaaatttacacatcttaagaagttcaaaataacaaatttgtattgaaatttgttcattttatattaaatata 2083156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 11117129 - 11117175
Alignment:
Q  179 aattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||||| |||||||| || |||||||||||||||| ||||||    
T  11117129 aattttagttgctttaacatgtgcaatattgcacatgttagacaaac 11117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 26834730 - 26834561
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| | || ||||||| || |||||||||| ||||| |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  26834730 tcatgtgcaaatttgcatatattaagaaatttaaaatggtaattttgacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 26834634  T
Q  154 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     | ||  ||||||||||||| ||| || |||||| | | ||| ||| || ||| ||||| |||||| ||||||    
T  26834633 gttttgtttttcaataaaaaattactacttttagatatcttagcatgtgcaatgttgcatatgttagacaaac 26834561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 225
Target Start/End: Complemental strand, 32186295 - 32186186
Alignment:
Q  114 acattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcac 212  Q
    |||||| ||||||||||||    ||||||| || | |||| |||| ||||| || ||||||||| || | |||||||||||||||| || ||| |||| |    
T  32186295 acatttaatattaaatataa---aacttttgaatatataaatgttgttttctaagaaaaagttactactattagttgttttaacatttgcaatgttgctc 32186199  T
Q  213 atgttaaacaaac 225  Q
    |||||||||||||    
T  32186198 atgttaaacaaac 32186186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 37523806 - 37523756
Alignment:
Q  177 ttaattttagttgttttaacatatgtaatattgcacatgttaaacaaacaa 227  Q
    |||||||||| ||||||||||| || ||||||| |||||||| ||||||||    
T  37523806 ttaattttagctgttttaacatgtgcaatattgtacatgttagacaaacaa 37523756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 38213081 - 38213123
Alignment:
Q  183 ttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||||||||||| || ||| |||||||||||||||||||    
T  38213081 ttagttgttttaacatgtgcaatgttgcacatgttaaacaaac 38213123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 44091404 - 44091346
Alignment:
Q  140 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacat 198  Q
    ||||||| |||||| |||| ||||||||||||| ||| || |||| |||||||||||||    
T  44091404 tttttaataaataattgttgttttcaataaaaaattaatacttttcgttgttttaacat 44091346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 10129169 - 10129104
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||| |||| ||| |||||||||||   ||||||| || |||||||||||||||| ||||||    
T  10129169 ttttcaatgaaaaattactaattttagttaccttaacatgtgcaatattgcacatgttagacaaac 10129104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 12346071 - 12346006
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||| ||||||||| || | ||| |||||||||||| |||||| |||||||||| | ||||||    
T  12346071 ttttcaagaaaaagttactactattaattgttttaacatgtgtaatgttgcacatgtcagacaaac 12346006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 45516373 - 45516316
Alignment:
Q  141 ttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacat 198  Q
    |||||| |||||| ||||| |||||||||||||||| || |||||||| | |||||||    
T  45516373 ttttaataaataattgttagtttcaataaaaagttactacttttagttatcttaacat 45516316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 1844572 - 1844731
Alignment:
Q  57 tgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactg 156  Q
    ||||||| |||  |||||||||||| ||||||||  |||||||| || |  |||| |  |||||||||||||||   | ||||||||||| |||||| ||    
T  1844572 tgtacaagtttacacatgttaagaaattcaaaataataaatttgtatcgaaatttatgtattttatattaaata---tttaactttttaataaataattg 1844668  T
Q  157 tta-ttttcaataaa-aagttattaattttagttgttttaacatatgtaatattgcacatgtt 217  Q
    ||| |||| |||||| || ||  || |||||||||||| ||| | || ||||||| |||||||    
T  1844669 ttactttttaataaagaaatttctacttttagttgtttcaacgtgtgcaatattgtacatgtt 1844731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 35583453 - 35583368
Alignment:
Q  140 tttttaacaaataactgttattttcaata---aaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 223  Q
    |||||||||||||| |||| |||||||||   ||||||| || ||||||  ||||||||||| || ||||||| |||||||| ||||    
T  35583453 tttttaacaaataattgttgttttcaataaataaaagttgtt-attttaaatgttttaacatgtgcaatattgtacatgttagacaa 35583368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 40568378 - 40568314
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 224  Q
    |||| ||||||||||||  | |||||||||||||||||| || |||||||||  ||||| |||||    
T  40568378 tttttaataaaaagttacaacttttagttgttttaacatgtgaaatattgcatgtgttagacaaa 40568314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 225
Target Start/End: Original strand, 15411632 - 15411800
Alignment:
Q  55 catgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataac 154  Q
    ||||| |||||||| |||||||||||| || ||||| |||| ||||  |||  | |||| |||||||||||||||||   ||| |||||||| |||| |     
T  15411632 catgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatat---gtagctttttaataaattat 15411728  T
Q  155 tgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||| |||| ||||||||| ||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  15411729 tgttgtttttcaataaaaaattactacttttagttactttaacatgtgcaatattgcacatgttagacaaac 15411800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 9747486 - 9747317
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||  |||||||||||| || ||||| |||| ||||  |||  | |||| |||||||||||||||||   ||| |||||| |||||||     
T  9747486 tcatgtgcaaattttcacatgttaagaagtttaaaatagtaattttgtcttggaacttgttcattttatattaaatat---gtagcttttttacaaatag 9747390  T
Q  154 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||| |||| ||||||| ||||| || ||||||||  |||||||| |||| |||||||||||||| ||||||    
T  9747389 ttgttgtttttcaataaatagttactacttttagttaatttaacatgtgtactattgcacatgttagacaaac 9747317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 225
Target Start/End: Original strand, 5583574 - 5583735
Alignment:
Q  61 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 160  Q
    |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   |||||| ||||      
T  5583574 caaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataattgttgg 5583670  T
Q  161 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  5583671 tttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 5583735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 14377593 - 14377425
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||||||| |||||||||    
T  14377593 tcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatat---gtaactttt-aacaaataa 14377498  T
Q  154 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  ||||||||||||||||| || |||||||||  ||||||| || |||||||||| ||||| ||||||    
T  14377497 ttgttggttttcaataaaaagttactacttttagttgccttaacatgtgcaatattgcacgtgttagacaaac 14377425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 225
Target Start/End: Original strand, 12438740 - 12438825
Alignment:
Q  140 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||| |||||| ||||  ||| ||| ||||||||||| |||||||||| | |||||||| |||||||||||||||| ||||||    
T  12438740 tttttaataaataattgttggttttaatgaaaagttattatttttagttgtctgaacatatgcaatattgcacatgttatacaaac 12438825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 45062367 - 45062207
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||| ||||||| |||||||| |||| |||   |||  | |||| |||||||||||||| ||   |||||||||||| ||||||    
T  45062367 tcatgtgcaaatttgcacatattaagaagttcaaaatagtaactttattttggaacttgtgcattttatattaaacat---gtaactttttaataaataa 45062271  T
Q  154 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 216  Q
     | || ||||  ||||||||||||  | ||||| |||||||||||||| |||||||| ||||||    
T  45062270 tttttgttttttaataaaaagttaccacttttaattgttttaacatatttaatattgtacatgt 45062207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 23932734 - 23932565
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| | || ||||||| || ||||| ||||| ||| || |  | |||| ||||||||||||| ||||    |||||||||| ||||||    
T  23932734 tcatgtgcaaatttgcatatattaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataa---aactttttaataaataa 23932638  T
Q  154 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||| |||| ||||  ||||||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  23932637 ttgttctttttcaatgtaaagttactatttttagttcctttaacatgtgcaatattgcacatgttagacaaac 23932565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 27665053 - 27665221
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||||||| || ||||||    
T  27665053 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatat---gtaactttt-aataaataa 27665148  T
Q  154 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| || |||||||||||||||| ||||||    
T  27665149 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 27665221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 225
Target Start/End: Complemental strand, 43806521 - 43806360
Alignment:
Q  62 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 161  Q
    ||||||| ||||||||| || || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |||| ||    
T  43806521 aaatttgcacatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataa---aacttttgaataaataattgttgtt 43806425  T
Q  162 ttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||| || ||||||||| || | ||| |||||||||||| || ||| |||||||||||| ||||||    
T  43806424 ttccaagaaaaagttactactattaattgttttaacatgtgcaatgttgcacatgttagacaaac 43806360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 188
Target Start/End: Original strand, 24729586 - 24729718
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  ||||||| ||||| |||||| || |   ||||||||||| ||||||    
T  24729586 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgtatattttgtattaattaca---taactttttaataaataa 24729682  T
Q  154 ct-gttattttcaataaaaagttattaattttagtt 188  Q
     |  |||||||||||||||| ||| || ||||||||    
T  24729683 ttatttattttcaataaaaatttactatttttagtt 24729718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 225
Target Start/End: Original strand, 34213965 - 34214129
Alignment:
Q  61 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtta- 159  Q
    |||||||| |||||||||||| || ||||| |||| |||  ||||  | ||| ||||||| ||||||| ||| | ||||||||||  |||||| ||||      
T  34213965 caaatttgcacatgttaagaaatttaaaatagtaatttttcattggaacttgaacattttttattaaaaata-tataactttttataaaataattgttgg 34214063  T
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||||||| ||| || ||||||||| |||||||| || | ||||  |||||||| ||||||    
T  34214064 ttttcaataaaaacttactatttttagttgctttaacatgtgcagtattatacatgttagacaaac 34214129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 34817649 - 34817544
Alignment:
Q  117 ttttatattaaatatagtgtaactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 216  Q
    |||| |||||||||||   ||||||||||| |||||| |||| ||||||||||| ||||  || |||||||| |||||| |  || ||||||||| ||||    
T  34817649 ttttttattaaatata---taactttttaataaataattgttgttttcaataaatagttgatatttttagttattttaatacgtgcaatattgcatatgt 34817553  T
Q  217 taaacaaac 225  Q
    || ||||||    
T  34817552 tagacaaac 34817544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 39367149 - 39367059
Alignment:
Q  136 taactttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||||| |||||| | || |||||||||||||  || ||||||||||||| ||||||||| |||||  || |||||||| ||||||    
T  39367149 taactttttaataaataattattgattttcaataaaattttgttaattttagttgctttaacatacgtaatggtgtacatgttagacaaac 39367059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 7757795 - 7757963
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||  |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  7757795 tcatgtgcaaatttacacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 7757891  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  ||| |||||||| || ||| ||||||||   ||||||| |  ||| |||||||||||| ||||||    
T  7757892 ttgttggttttaataaaaacttgttacttttagttaccttaacatgtacaattttgcacatgttagacaaac 7757963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 12016732 - 12016667
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||||||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  12016732 ttttcaataaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 12016667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 172
Target Start/End: Original strand, 2579983 - 2580082
Alignment:
Q  70 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttcaataa 169  Q
    |||||||||||| |||||| | |||| |||| ||||   |||||| ||||||| |||||||| |   || |||||||||||||| ||||||||| |||||    
T  2579983 acatgttaagaagttcaaactagtaagtttgtattgaattttgtatattttatgttaaatattg---aattttttaacaaataattgttatttttaataa 2580079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 7720180 - 7720116
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaa 224  Q
    ||||||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| |||||    
T  7720180 ttttcaaaaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaa 7720116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 26003355 - 26003431
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaata 130  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  |||||||||||| ||||||||||    
T  26003355 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaatttgtacatttgatattaaata 26003431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 2051721 - 2051639
Alignment:
Q  116 attttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatat 200  Q
    ||||||||||||||||    ||| ||||||| |||||| |||| |||| ||||||||| ||  |||||||||||||||||||||||    
T  2051721 attttatattaaatatt---taaatttttaataaataattgttgtttttcaataaaaacttgctaattttagttgttttaacatat 2051639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 225
Target Start/End: Original strand, 43388857 - 43388944
Alignment:
Q  139 ctttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||| |||||| |||| |||||||||||||| ||  || ||||||||| ||||| || || |||||||||||| ||| ||||||    
T  43388857 ctttttaataaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcacatattagacaaac 43388944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 19228594 - 19228426
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||| ||||||||||   ||||||||| | ||| |||    
T  19228594 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatat---gtaacttttaatcaa-taa 19228499  T
Q  154 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  19228498 ttgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 19228426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 225
Target Start/End: Original strand, 36612796 - 36612909
Alignment:
Q  110 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatatt 208  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| ||||| || ||||||||| || | |||||| |||||||||  | ||| ||    
T  36612796 ttgtacatttaatattaaatataa---aacttttgaataaataaatgttgttttccaaaaaaaagttactactattagttattttaacatgagcaatgtt 36612892  T
Q  209 gcacatgttaaacaaac 225  Q
    |||||||||| ||||||    
T  36612893 gcacatgttagacaaac 36612909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 225
Target Start/End: Original strand, 36620647 - 36620760
Alignment:
Q  110 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatatt 208  Q
    |||||||||| ||||||||||||    ||||||| || |||||| |||| ||||| || ||||||||| || | |||||| |||||||||  | ||| ||    
T  36620647 ttgtacatttaatattaaatataa---aacttttgaataaataaatgttgttttccaaaaaaaagttactactattagttattttaacatgagcaatgtt 36620743  T
Q  209 gcacatgttaaacaaac 225  Q
    |||||||||| ||||||    
T  36620744 gcacatgttagacaaac 36620760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 36909503 - 36909553
Alignment:
Q  175 tattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||| ||||| |||||||||||| |||||||||||| |||||| ||||||    
T  36909503 tattacttttaattgttttaacatgtgtaatattgcatatgttagacaaac 36909553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 39904159 - 39904225
Alignment:
Q  159 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  39904159 attttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 39904225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 4579901 - 4579966
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||| |||||||| ||  |||||||   ||||||| ||||||||||||||||||| ||||||    
T  4579901 ttttcaatgaaaagttactatatttagtttccttaacatgtgtaatattgcacatgttagacaaac 4579966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 16755028 - 16754971
Alignment:
Q  168 aaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  16755028 aaaaagttactactattagttgttttaacatttgcaatgttgcacatgttagacaaac 16754971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 16919266 - 16919331
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||| ||||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  16919266 ttttcaacaaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 16919331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 22705520 - 22705455
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  22705520 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 22705455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 26003612 - 26003669
Alignment:
Q  168 aaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  26003612 aaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 26003669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 25998088 - 25998172
Alignment:
Q  134 tgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtt 217  Q
    |||| |||||||| |||||| |||| |||| |||||||||||| | | ||||||||  |||||||| || |||| ||||||||||    
T  25998088 tgtatctttttaataaataattgttgtttttcaataaaaagttttcacttttagttactttaacatgtgcaataatgcacatgtt 25998172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 225
Target Start/End: Original strand, 26229864 - 26230030
Alignment:
Q  55 catgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataac 154  Q
    ||||| ||||||||  || |||||||| || ||||| |||| ||||| ||   |||| ||  |||||||||||||||   ||||||||| | ||| |||     
T  26229864 catgtgcaaatttgtccaggttaagaagtttaaaatagtaactttgacttaaaatttatattttttatattaaatat---gtaacttttaatcaa-taat 26229959  T
Q  155 tgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||  ||| |||||||| ||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  26229960 tgttggttttaataaaaaattactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 26230030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 6017025 - 6016856
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||||||||| || || ||| |||||| ||||| |||  | |||| ||||| ||||||||||||   ||||||||||| ||||||    
T  6017025 tcatgtgcaaatttgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatata---taactttttaaaaaataa 6016929  T
Q  154 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||| |||||||| || |||||| ||| ||| ||| || ||| |||||||||||| ||||||    
T  6016928 gtgttgtttttcaatgaaaagttactacttttagatgtcttaccatgtgcaatgttgcacatgttagacaaac 6016856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 225
Target Start/End: Complemental strand, 30623477 - 30623326
Alignment:
Q  72 atgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaa 170  Q
    |||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |||| |||| ||| |||    
T  30623477 atgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttgatattaaatataa---aacttttgaataaataattgttgtttttcaagaaa 30623381  T
Q  171 aagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||| || | |||||||||||||||| |||||| |||||||||||| ||||||    
T  30623380 aagttactactattagttgttttaacatgtgtaatgttgcacatgttagacaaac 30623326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 225
Target Start/End: Original strand, 8977483 - 8977644
Alignment:
Q  62 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 160  Q
    ||||||| || ||||||||| |||||||| ||||||||| ||||  | |||| ||||||||||||||||   |||||||||| || |||| | ||||  |    
T  8977483 aaatttgcacttgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaata---tgtaacttttcaataaatgattgttgtt 8977579  T
Q  161 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||| ||| |||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  8977580 tttcaattaaaggttgctacttttagtttccttaacatgtgcaatattgcacatgttagacaaac 8977644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 34692523 - 34692354
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  34692523 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttaaataaataa 34692427  T
Q  154 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     | |  |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  34692426 ttatagttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 34692354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 14228135 - 14228303
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  14228135 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 14228231  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||||||| ||  || ||||| ||   ||||||| || |||||||||||||||| ||||||    
T  14228232 ttgttggtttcaataaaaacttgctacttttaattaccttaacatgtgcaatattgcacatgttagacaaac 14228303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 28943778 - 28943946
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  28943778 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 28943874  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||||||| ||  || ||||| ||   ||||||| || |||||||||||||||| ||||||    
T  28943875 ttgttggtttcaataaaaacttgctacttttaattaccttaacatgtgcaatattgcacatgttagacaaac 28943946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 29730383 - 29730295
Alignment:
Q  118 tttatattaaatatagtgtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatatt 208  Q
    |||||||||||||||   ||||||||||| ||||||||||| |||| ||||||||| |||||||||||| | | ||||||||||| ||||||    
T  29730383 tttatattaaatata---taactttttaataaataactgttgtttttcaataaaaacttattaattttaatagctttaacatatgcaatatt 29730295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 223
Target Start/End: Complemental strand, 10887198 - 10887031
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | ||||  |||||||||||||||   |||| |||||||| ||||||    
T  10887198 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgatttggaacttgtgtattttatattaaata---tgtagctttttaataaataa 10887102  T
Q  154 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 223  Q
     | ||  ||||||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||    
T  10887101 gttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaa 10887031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 225
Target Start/End: Complemental strand, 33017891 - 33017725
Alignment:
Q  56 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 155  Q
    |||| |||||||| ||||||||| || || ||||| |||| |||| || |  | ||| ||||||| |||||||||||   |||||||||   |||||| |    
T  33017891 atgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatata---taactttttgttaaataatt 33017795  T
Q  156 gttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||  ||| |||||||| ||  |||||||||||   ||||||| || |||||||||||||||| ||||||    
T  33017794 gttggttttaataaaaacttgctaattttagttaccttaacatgtgcaatattgcacatgttagacaaac 33017725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 1017803 - 1017956
Alignment:
Q  70 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-attttcaata 168  Q
    |||||||||||| || ||| | |||| ||||| |||  | |||| ||||||||||||||||   ||||| ||||||| |||||| ||||  |||||||      
T  1017803 acatgttaagaagtttaaagtagtaactttgacttgaaagttgtgcattttatattaaata---tgtaaatttttaataaataattgttggttttcaacg 1017899  T
Q  169 aaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||| || |||||||| ||| | ||| || | |||||||||||||| ||||||    
T  1017900 aaaagttactacttttagttatttaatcatgtgcagtattgcacatgttagacaaac 1017956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 29863311 - 29863480
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| ||||| |||  | |  | || | ||||||||||||| ||||    |||||||||| ||||||    
T  29863311 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaaaattgtgtcggaacttttgcattttatattaactataa---aactttttaataaataa 29863407  T
Q  154 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     | || |||| ||||  ||||||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  29863408 ttattctttttcaatgtaaagttactatttttagttcctttaacatgtgcaatattgcacatgttagacaaac 29863480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 1814894 - 1814959
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||||||||  | ||| ||||||||| |||||||| || |||||||||||||||| ||||||    
T  1814894 ttttcaataaaaatatgttacttttagttgctttaacatgtgcaatattgcacatgttagacaaac 1814959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 3485711 - 3485776
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||||||||| |  |||||||||||  |||||||||||||||||| || |||||| ||||||    
T  3485711 ttttcaataaaaaggtgctaattttagttcctttaacatatgtaatattacatatgttagacaaac 3485776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 17552596 - 17552764
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| |||| | || ||||  | ||| ||||||| |||||||||||   ||| |||||   ||||||    
T  17552596 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattatgcattggaacttgaacattttgtattaaatata---taattttttgttaaataa 17552692  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||| ||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  17552693 ttgttggtttcgataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 17552764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 24979262 - 24979327
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  24979262 ttttcaagaaaaagttactattattagttgttttaacatgtgcaatgttgcacatgttagacaaac 24979327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 17596370 - 17596315
Alignment:
Q  168 aaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 223  Q
    ||||||||| || |||||||||| ||||||| || |||||||||||||||| ||||    
T  17596370 aaaaagttactacttttagttgtcttaacatgtgcaatattgcacatgttagacaa 17596315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 18332697 - 18332866
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||  |||||||||||| || ||| || ||| ||||| |||  | || | ||||| ||||||||||||   || |||||||| ||||||    
T  18332697 tcatgtgcaaattttcacatgttaagaagtttaaagtgataattttgacttggaacttatgcatttcatattaaatata---tagctttttaataaataa 18332793  T
Q  154 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     | || |||| ||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  18332794 gttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 18332866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 5363005 - 5363070
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  5363005 ttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 5363070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 30839950 - 30839782
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  30839950 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 30839854  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  30839853 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 30839782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 36597748 - 36597580
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  36597748 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 36597652  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  36597651 ttgttggtttcaataaaaatttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 36597580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 223
Target Start/End: Original strand, 8103589 - 8103755
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| ||||||||||||| |||   |||  ||||||| || |||    
T  8103589 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattat---gtagatttttaataattaa 8103685  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 223  Q
     ||||  |||||||||||||||| || |||||||||  ||||||| || |||||||||||||||| ||||    
T  8103686 ttgttggtttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaa 8103755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 225
Target Start/End: Original strand, 18841721 - 18841883
Alignment:
Q  61 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 160  Q
    |||||||| | ||||||| || || ||||| | || |||| ||||  |||||||||||| ||||||||||||    ||||||| || |||||| |||| |    
T  18841721 caaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaatttgtacatttaatattaaatataa---aacttttgaataaataattgttgt 18841817  T
Q  161 tttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  18841818 tttccaaaaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 18841883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 3398389 - 3398220
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    ||||||| || ||||||    
T  3398389 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata---aaacttttaaataaataa 3398293  T
Q  154 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     | |  |||| ||| ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  3398292 ttatagttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 3398220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 40513120 - 40512952
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    ||||||||||||||| ||||||||| || || ||||| |||| |||| ||||  ||||| | ||||| ||| |||||||   |||||||||   ||||||    
T  40513120 tcatgtacaaatttgcacatgttaaaaaatttaaaatagtaactttgcattggaatttgaatattttgtatcaaatata---taactttttgttaaataa 40513024  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||||||| ||| || || |||||   ||||||| || |||||||||||||||| ||||||    
T  40513023 ttgttgatttcaataaaaacttactacttctagttaccttaacatgtgcaatattgcacatgttagacaaac 40512952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 225
Target Start/End: Original strand, 5958196 - 5958301
Alignment:
Q  118 tttatattaaatatagtgtaactttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 216  Q
    ||||||||||||||   |||| ||||||| || ||| |||| ||||||||| |||| ||| || ||||||||  |||||||| |||||||||||||||||    
T  5958196 tttatattaaatat---gtaaatttttaataattaattgttgattttcaatgaaaaattactacttttagtttctttaacatgtgtaatattgcacatgt 5958292  T
Q  217 taaacaaac 225  Q
    || ||||||    
T  5958293 tagacaaac 5958301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 11636900 - 11636732
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| ||||| |||||||||||   |||| ||||||| || |||    
T  11636900 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatat---gtaaatttttaataattaa 11636805  T
Q  154 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||| |||||||| || ||||||||  |||||||| || |||||||||||||||| ||||||    
T  11636804 ttgttggttttcaatgaaaagttactacttttagtttctttaacatgtgcaatattgcacatgttagacaaac 11636732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 15240959 - 15241065
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||||||||| || ||||||||  |||||||| ||||  |||||| ||| ||||||||||||||   ||| ||||||| ||||||    
T  15240959 tcatgtgcaaatttgtacatgttaaaaagttcaaaatattaaatttgtattgaaatttgtgcatgttatattaaatata---taattttttaataaataa 15241055  T
Q  154 ctgttatttt 163  Q
     |||| ||||    
T  15241056 ttgttgtttt 15241065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 10665053 - 10665134
Alignment:
Q  136 taactttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtt 217  Q
    ||||||||||| |||||| |  |||||||||| ||||||||||| ||||||||   ||||||| || |||||| ||||||||    
T  10665053 taactttttaataaataattaatattttcaatgaaaagttattacttttagttaccttaacatgtgcaatattacacatgtt 10665134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 11360243 - 11360186
Alignment:
Q  168 aaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||| ||| || |||||||||||||||||| |||||||||| |||||||||| ||||    
T  11360243 aaaaaattactacttttagttgttttaacatgtgtaatattgaacatgttaaataaac 11360186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 11250090 - 11250134
Alignment:
Q  181 ttttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||| |||||||| || |||||||||||||||||||||||    
T  11250090 ttttagttgctttaacatgtgcaatattgcacatgttaaacaaac 11250134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 28629984 - 28629890
Alignment:
Q  117 ttttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacat 214  Q
    |||||||||||||||   ||||||||| || |||||| ||||  |||||||| ||||||||||| ||||||||| |||||||| || ||||||| ||||    
T  28629984 ttttatattaaatat---gtaactttt-aataaataattgttggttttcaatgaaaagttattatttttagttgctttaacatgtgcaatattgtacat 28629890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 33072721 - 33072677
Alignment:
Q  181 ttttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||| |||||||| || |||||||||||||||||||||||    
T  33072721 ttttagttgatttaacatgtgcaatattgcacatgttaaacaaac 33072677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 2795692 - 2795524
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||| ||||||||||   ||||||||| | ||| |||    
T  2795692 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatat---gtaacttttaatcaa-taa 2795597  T
Q  154 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  2795596 ttgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 2795524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 11376026 - 11375972
Alignment:
Q  159 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcaca 213  Q
    ||||||||| |||||||| || ||||||||| |||||||| || |||||||||||    
T  11376026 attttcaatgaaaagttactacttttagttgctttaacatgtgcaatattgcaca 11375972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 15820379 - 15820317
Alignment:
Q  70 acatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 132  Q
    |||||| ||||| |||||||| ||||||||| ||||  ||||| ||||||| |||||||||||    
T  15820379 acatgtcaagaaattcaaaatagtaaatttgtattgaaatttgaacattttctattaaatata 15820317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 146
Target Start/End: Original strand, 23995427 - 23995516
Alignment:
Q  56 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaa 146  Q
    |||| |||||||| |||||||||||| || ||||| |||| |||  ||||  | ||||||||||| ||||||||||| | |||||||||||    
T  23995427 atgtgcaaatttgtacatgttaagaagtttaaaatagtaattttatattgaaacttgtacattttgtattaaatata-tataactttttaa 23995516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 31567507 - 31567577
Alignment:
Q  61 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatat 131  Q
    |||||||| ||||||||| || || |||||||||| ||||  |||  |||||| |||||||||||||||||    
T  31567507 caaatttgcacatgttaaaaaatttaaaatggtaattttgtcttgaaatttgttcattttatattaaatat 31567577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 34578078 - 34578012
Alignment:
Q  159 attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||| |||| |||||| ||||||||   ||||||| || |||||||||||||||| ||||||    
T  34578078 attttcaatgaaaaattattacttttagttaccttaacatgtggaatattgcacatgttagacaaac 34578012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 198
Target Start/End: Original strand, 40309497 - 40309580
Alignment:
Q  115 cattttatattaaatatagtgtaactttttaacaaataactgttatttt---caataaaaagttattaattttagttgttttaacat 198  Q
    ||||||||||||||||||   ||||||||||| |||| | |||||||||   ||||||||  || ||| ||||||||||||||||||    
T  40309497 cattttatattaaatata---taactttttaataaattattgttatttttttcaataaaatattgttacttttagttgttttaacat 40309580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 24014800 - 24014865
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||| |||||||| ||  || |||||||||||||||||| || ||| |||||||||||| ||||||    
T  24014800 ttttgaataaaaactttatacttttagttgttttaacatgtgcaatgttgcacatgttagacaaac 24014865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 172
Target Start/End: Complemental strand, 6863725 - 6863610
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||||||||| || || ||||| |||| |||  ||||  | ||| ||||||| |||||||||||   ||||||||||  ||||||    
T  6863725 tcatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttatattggaacttgaacattttgtattaaatata---taactttttattaaataa 6863629  T
Q  154 ctgttattttcaataaaaa 172  Q
     ||||  ||||||||||||    
T  6863628 ttgttggtttcaataaaaa 6863610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 7163010 - 7162934
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaata 130  Q
    |||||||||||| || |  | |||||||||| ||||| |||| |||||||||  | |||| ||||||||||||||||    
T  7163010 tcatgtacaaatatgtattttttaagaattttaaaatagtaagtttgaattgaaacttgttcattttatattaaata 7162934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 20058137 - 20058109
Alignment:
Q  1 ttcattagataattttatttgatgatgtt 29  Q
    |||||||||||||||||||||||||||||    
T  20058137 ttcattagataattttatttgatgatgtt 20058109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 24015706 - 24015674
Alignment:
Q  5 ttagataattttatttgatgatgttttattgtt 37  Q
    ||||||| |||||||||||||||||||||||||    
T  24015706 ttagatagttttatttgatgatgttttattgtt 24015674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 2571437 - 2571269
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| |||| |||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  2571437 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 2571341  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  2571340 ttgttggtttcaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 2571269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 10307935 - 10307767
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| ||||||||| ||||  | ||| ||||||| |||||||||||   |||||||||   ||||||    
T  10307935 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaaatttgcattggaacttgaacattttgtattaaatata---taactttttgttaaataa 10307839  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||||||| ||  || ||||||||   ||| ||| || |||||||||||||||| ||||||    
T  10307838 ttgttggtttcaataaaaatttgctacttttagttaccttatcatgtgcaatattgcacatgttagacaaac 10307767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 225
Target Start/End: Original strand, 54527717 - 54527884
Alignment:
Q  56 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataact 155  Q
    |||| |||||||| |||||||||||| || |||||   || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| |    
T  54527717 atgtgcaaatttgcacatgttaagaaatttaaaatataaattttgtattggaacttgtacatttaatattaaatataa---aacttttgaataaataatt 54527813  T
Q  156 gttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||| ||||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  54527814 gttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 54527884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 38389616 - 38389447
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  38389616 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 38389520  T
Q  154 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     | ||  ||||||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  38389519 gttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 38389447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 50204572 - 50204403
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| | || |||| ||||  |  ||||||||| ||||||||||||    ||||||| || | ||||    
T  50204572 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacctgtacatttaatattaaatataa---aacttttgaatatataa 50204476  T
Q  154 ctgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||||||||| || ||||| ||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  50204475 ttgttattttccaagaaaaaattactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 50204403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 20938162 - 20938056
Alignment:
Q  117 ttttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatg 215  Q
    |||||||||||||||   |||| |||||||  ||||| ||||| |||||||||||||||||||| ||||||||   ||||||| || |||||||||||||    
T  20938162 ttttatattaaatat---gtaa-tttttaatcaataattgttagttttcaataaaaagttattacttttagttaccttaacatgtgcaatattgcacatg 20938067  T
Q  216 ttaaacaaaca 226  Q
    ||| |||||||    
T  20938066 ttagacaaaca 20938056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 223
Target Start/End: Original strand, 46492352 - 46492519
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||  ||| |||||||| || ||| | |||| |||| ||||  | ||||||||||| |||||||||||   |||||  |||| ||||||    
T  46492352 tcatgtgcaaattttcacacgttaagaaatttaaagtagtaactttgcattgaaacttgtacattttgtattaaatata---taactcgttaataaataa 46492448  T
Q  154 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 223  Q
     |||| |||| ||||||||| |||  | ||||||||| |||||||| || |||||||||||| ||||||||    
T  46492449 ttgttgtttttcaataaaaacttaccacttttagttgctttaacatgtgcaatattgcacattttaaacaa 46492519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 51618216 - 51618050
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| ||  |||| |||| |||| ||||  | ||||||||||| |||||||||||   ||   |||||| ||||||    
T  51618216 tcatgtgcaaatttgcacatgttaagaagtttcaaattgtaactttgcattggaacttgtacattttgtattaaatata---ta---ttttaataaataa 51618123  T
Q  154 ctgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     |||| |||| || |||||| ||  |  |||||||||||||||||| || |||||||||||||||| ||||||    
T  51618122 ttgttgtttttcagtaaaaacttgctgcttttagttgttttaacatgtgcaatattgcacatgttagacaaac 51618050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 208
Target Start/End: Complemental strand, 53794872 - 53794781
Alignment:
Q  115 cattttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatatt 208  Q
    |||||||||||||||||   |||||||||||| |||| | ||||| ||||||||||| |||||||| ||||||||| |||||||| || ||||||    
T  53794872 cattttatattaaatat---gtaactttttaataaattattgttacttttcaataaatagttattatttttagttggtttaacatgtgcaatatt 53794781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 2379162 - 2379238
Alignment:
Q  138 actttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgt 216  Q
    ||||||||| |||||| |||||||  ||||||||| ||| || |||||||||||||||||| || ||||||||||||||    
T  2379162 actttttaataaataattgttatt--caataaaaacttactacttttagttgttttaacatgtgcaatattgcacatgt 2379238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 193
Target Start/End: Original strand, 38786343 - 38786468
Alignment:
Q  64 atttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatttt 163  Q
    ||||| |||||||||||| || ||||| |||| ||||| |||  ||||||  |||||||| |||||   |||||  ||||||| |||||| |||||||||    
T  38786343 atttgcacatgttaagaagtttaaaatagtaattttgatttgaaatttgtggattttatactaaat---gtgtat-tttttaataaataattgttatttt 38786438  T
Q  164 caataaaaagttattaattttagttgtttt 193  Q
    ||||||||| ||| || |||||||||||||    
T  38786439 caataaaaaattactatttttagttgtttt 38786468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 11611083 - 11610915
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||||| |||||| || ||| | |||| ||||| |||  | ||||   |||||||||||||||   ||||||||| || ||||||    
T  11611083 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatat---gtaactttt-aataaataa 11610988  T
Q  154 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||| |||||||| || |||||||||  ||||||| || |||||||||||||||| ||||||    
T  11610987 ttgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaac 11610915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 24569324 - 24569408
Alignment:
Q  135 gtaactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtta 218  Q
    |||||||||||| |||||| || | |||| |||||||||||||||| || ||||||| ||||||| |  ||||||||||||||||    
T  24569324 gtaactttttaataaataattgatgtttttcaataaaaagttattatttgtagttgtcttaacatgtccaatattgcacatgtta 24569408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 37444232 - 37444149
Alignment:
Q  140 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaa 223  Q
    ||||||| || ||| ||||  |||||||||||||||| || |||||||||  ||||||| || |||||||||||||||| ||||    
T  37444232 tttttaataattaattgttgatttcaataaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaa 37444149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 226
Target Start/End: Original strand, 40330381 - 40330468
Alignment:
Q  139 ctttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaaca 226  Q
    |||||||| |||| | |||| |||||||| |||||||| || ||||| |||||||| |||  ||||| ||||| ||||||||||||||    
T  40330381 ctttttaataaattattgttgttttcaattaaaagttactatttttaattgttttatcatgcgtaatgttgcatatgttaaacaaaca 40330468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 225
Target Start/End: Complemental strand, 13495455 - 13495294
Alignment:
Q  62 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgtt-at 160  Q
    ||||||| ||||| |||||| || ||| | |||| ||||| |||  | |||| |||||||||||||||||   |||  ||||||| |||||| |||| ||    
T  13495455 aaatttgcacatgataagaagtttaaagtagtaattttgacttggaacttgtgcattttatattaaatat---gtaggtttttaataaataattgttgat 13495359  T
Q  161 tttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||||||| ||| || ||||||||   ||||||| || ||  |||||||||||| ||||||    
T  13495358 tttcaataaaaaattactacttttagttaccttaacatgtgcaaatttgcacatgttagacaaac 13495294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 225
Target Start/End: Complemental strand, 42180213 - 42180052
Alignment:
Q  62 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 161  Q
    ||||||| |||||||||||| || |||||   || |||| ||||  | |||||||||| ||||||||||||    ||||||| || |||||| | |  ||    
T  42180213 aaatttgcacatgttaagaagtttaaaataaaaattttgtattggaacttgtacatttaatattaaatataa---aacttttaaataaataattatagtt 42180117  T
Q  162 ttc-aataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||| || ||||||||| || | |||||||||||||||| || ||| |||||||||||| ||||||    
T  42180116 ttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 42180052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 37055455 - 37055544
Alignment:
Q  137 aactttttaacaaataactgttatttt-caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||||| |||||| |||| |||| ||||  ||||||| || ||||||||  ||||||||||| ||||||| |||||||| ||||||    
T  37055455 aactttttaataaataattgttctttttcaatgtaaagttactatttttagttcctttaacatatgcaatattgtacatgttagacaaac 37055544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 47387013 - 47386922
Alignment:
Q  136 taactttttaacaaataactgttatttt--caataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||||| |||||| |||| ||||  ||||||||| ||| || ||||||||| ||||| ||  | |||||||||||||||| ||||||    
T  47387013 taactttttaataaataattgtttttttttcaataaaaacttactacttttagttgctttaatatgcgcaatattgcacatgttagacaaac 47386922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 51401607 - 51401531
Alignment:
Q  56 atgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 132  Q
    ||||||||||||| |||||||||||| || ||||| | || |||| ||||  | |||||||||| ||||||||||||    
T  51401607 atgtacaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata 51401531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 8497550 - 8497601
Alignment:
Q  174 ttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||| |||||||||||||||||| || ||| |||||||||||||| ||||    
T  8497550 ttattacttttagttgttttaacatgtgcaatgttgcacatgttaaataaac 8497601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 218
Target Start/End: Complemental strand, 45983675 - 45983516
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| ||| |||||||| || ||||| | || |||  ||||  | |||||||||| ||||||||||||   | |||||| |||||||||    
T  45983675 tcatgtgcaaatttgcacaggttaagaagtttaaaatagaaattttatattgaaacttgtacatttaatattaaatata---ttacttttgaacaaataa 45983579  T
Q  154 ctgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgtta 218  Q
     |||| ||   || ||||||||| || | ||| ||||||||||  ||||||| ||||||||||||    
T  45983578 ttgtttttcaaaaaaaaaagttactactattaattgttttaac--atgtaatgttgcacatgtta 45983516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 225
Target Start/End: Original strand, 46845531 - 46845618
Alignment:
Q  139 ctttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||| |||||| |||| |||||||||||||| ||  || ||||||||| ||||| || || |||||||||||| ||| ||||||    
T  46845531 ctttttaataaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcacatattagacaaac 46845618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 13879899 - 13879973
Alignment:
Q  140 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacat 214  Q
    ||||||| |||||| |||  |||||||||||||||| | | ||| |||| |||||| || |||||||||||||||    
T  13879899 tttttaataaataattgtggttttcaataaaaagttttcactttcagttattttaagatgtgtaatattgcacat 13879973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 25633167 - 25633121
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttg 100  Q
    |||||| ||||||||||| ||||||||| |||||||| |||||||||    
T  25633167 tcatgtgcaaatttgaacttgttaagaagttcaaaatagtaaatttg 25633121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 26200733 - 26200799
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaaca 226  Q
    |||||| |||||||||| || |  |||||| ||||||||||| ||||||||| |||||| |||||||    
T  26200733 ttttcagtaaaaagttactactcctagttgctttaacatatgcaatattgcaaatgttatacaaaca 26200799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 225
Target Start/End: Original strand, 12515491 - 12515651
Alignment:
Q  62 aaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttatt 161  Q
    ||||||| ||||||||| || || ||||| |||| |||| || |  | ||| ||||||| |||||||||||   |||||||||   |||||| ||||  |    
T  12515491 aaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatata---taactttttgttaaataattgttggt 12515587  T
Q  162 ttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    || |||||||| ||  || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  12515588 tttaataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 12515651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 23523115 - 23523038
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatat 131  Q
    |||||| |||||||| |||||||||||| || ||| |||||| ||||| |||  | |||| ||||| |||||||||||    
T  23523115 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatat 23523038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 30214103 - 30214187
Alignment:
Q  141 ttttaacaaataactgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||| |||||| |||| ||||||||| |||||||| || |||||||||  |||  || ||||||||||||||||||| ||||||    
T  30214103 ttttaataaataattgttgattttcaatgaaaagttacta-ttttagttgccttagaatgtgtaatattgcacatgttagacaaac 30214187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 32321835 - 32321899
Alignment:
Q  160 ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    |||||||||||| |||  || |||||||| |||||||||||| |||||| ||||||||| ||||||    
T  32321835 ttttcaataaaa-gttgatatttttagttcttttaacatatgcaatattacacatgttatacaaac 32321899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 49396548 - 49396471
Alignment:
Q  55 catgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatata 132  Q
    ||||| |||||||| |||| ||||||| || ||| | |||||||||||||   |||| | ||||||||||||||||||    
T  49396548 catgtgcaaatttgtacatattaagaagtttaaagtagtaaatttgaattaaaatttatgcattttatattaaatata 49396471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 37123 - 37292
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||| || ||| ||||| |||  | |||| ||||| ||||||||||   |||| |||||||| ||||||    
T  37123 tcatgtgcaaatttgcacatgttaagaagtttaaagtgataactttgacttggaacttgtgcatttcatattaaata---tgtagctttttaataaataa 37219  T
Q  154 ctgtt-attttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     | ||  ||||||||||||| ||| || |||||| | | ||||||| || ||| |||||||||||| ||||||    
T  37220 gttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaac 37292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 486 - 443
Alignment:
Q  181 ttttagttgttttaacatatgtaatattgcacatgttaaacaaa 224  Q
    ||||||||| |||||||| || ||||||||||||||||||||||    
T  486 ttttagttgatttaacatgtgcaatattgcacatgttaaacaaa 443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 218
Target Start/End: Original strand, 13723 - 13829
Alignment:
Q  110 ttgtacattttatattaaatatagtgtaactttttaacaaataactgttattttc-aataaaaagttattaattttagttgttttaacatatgtaatatt 208  Q
    |||||||||  ||||||||||||    ||||||| || |||||||| || ||||| || ||||||||| || | |||||||||||||||| || ||| ||    
T  13723 ttgtacattaaatattaaatataa---aacttttaaataaataacttttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgtt 13819  T
Q  209 gcacatgtta 218  Q
    ||||||||||    
T  13820 gcacatgtta 13829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 8506 - 8564
Alignment:
Q  140 tttttaacaaataactgttattttcaataaaaagttattaattttagttgttttaacat 198  Q
    ||||||| |||||| |||| ||||||||||||| ||| || |||| |||||||||||||    
T  8506 tttttaataaataattgttgttttcaataaaaaattaatacttttcgttgttttaacat 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 225
Target Start/End: Original strand, 52788 - 52956
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||| ||||||||||   ||||||||| | ||| |||    
T  52788 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatat---gtaacttttaatcaa-taa 52883  T
Q  154 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  52884 ttgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 52956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 94086 - 94195
Alignment:
Q  113 tacattttatattaaatatagtgtaactttttaacaaataactgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgca 211  Q
    |||||||| |||||||||||  ||   ||||||| |||||| | ||| ||||||||||||| ||| || ||||||||| |||||||| || ||| |||||    
T  94086 tacattttgtattaaatatatagt---tttttaataaataattattagttttcaataaaaacttactacttttagttgatttaacatgtgcaatgttgca 94182  T
Q  212 catgttaaacaaa 224  Q
     |||||| |||||    
T  94183 tatgttagacaaa 94195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 145846 - 145678
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||| | |||| ||||| |||  | ||||   |||| ||||||||||   ||||||||| | ||| |||    
T  145846 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatat---gtaacttttaatcaa-taa 145751  T
Q  154 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||| |||||||| || ||||||||   ||||||| || |||||||||||||||| ||||||    
T  145750 ttgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 145678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 225
Target Start/End: Complemental strand, 13254 - 13086
Alignment:
Q  54 tcatgtacaaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataa 153  Q
    |||||| |||||||| |||||||||||| || ||||| |||| ||| | |||  ||||||   |||||||||||||||   ||| ||||| | |||  ||    
T  13254 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaatttggaatttgtgttttttatattaaatat---gtagcttttaatcaac-aa 13159  T
Q  154 ctgtta-ttttcaataaaaagttattaattttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
     ||||  |||||||| |||| ||| || ||||||||   |||||||||| |||||||||||||||| ||||||    
T  13158 ttgttggttttcaatgaaaaattactacttttagttaccttaacatatgcaatattgcacatgttagacaaac 13086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 18012 - 18111
Alignment:
Q  61 caaatttgaacatgttaagaatttcaaaatggtaaatttgaattgctatttgtacattttatattaaatatagtgtaactttttaacaaataactgttat 160  Q
    |||||||| || |||||| |  |||||||| |||  |||| ||||  |||||||||||||||||||||||||   ||||||| ||| |||||| |||| |    
T  18012 caaatttgcacgtgttaaaatgttcaaaatagtatgtttgtattggaatttgtacattttatattaaatata---taactttctaataaataattgttgt 18108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 22504 - 22460
Alignment:
Q  181 ttttagttgttttaacatatgtaatattgcacatgttaaacaaac 225  Q
    ||||||||| |||||||| || |||||||||||||||||| ||||    
T  22504 ttttagttgatttaacatgtgcaatattgcacatgttaaagaaac 22460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University