View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9403_high_5 (Length: 328)
Name: NF9403_high_5
Description: NF9403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9403_high_5 |
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Alignment Details
Target: chr1 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 20 - 274
Target Start/End: Original strand, 10365809 - 10366063
Alignment:
| Q |
20 |
tcataggcgacagtttcaagagggggtttatcaatatcattacgaagagcatcaatgatttcttcttcatgaaagtttaaaagcttaaaaagctgtttca |
119 |
Q |
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| T |
10365809 |
tcataggcaacagtttcaagagggggtttatcaatatcattacgaagagcatcaatgatttcttcttcatgaaagtttaaaagcttaaaaagctgtttca |
10365908 |
T |
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| Q |
120 |
actgcgacactttccagtcataatttcttgtttttccagaaccaaatgtttctctcagttcattcaccagcatggatcccgcttcattgtcgaagatatt |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
10365909 |
actgcgacactttccagtcataatttcttgtttttccagaaccaaatgtttctctcagttcattcaccagcatggatcccgcttcattgtcgaacatatt |
10366008 |
T |
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| Q |
220 |
ctttctctccaattcagtcgtcataataaatcaagaaacagcgagaggataaagt |
274 |
Q |
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| T |
10366009 |
ctttctctccaattcagtcgtcataataaatcaagaaatagcgagaggataaagt |
10366063 |
T |
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