View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9403_low_13 (Length: 324)
Name: NF9403_low_13
Description: NF9403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9403_low_13 |
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Alignment Details
Target: chr6 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 34899129 - 34899435
Alignment:
| Q |
1 |
ctcctaacccttcctcccagaccgcaaccgtgttcataggccttttgaaactcccacaccctcaccccactttcctgtccagcccacaactgtgtttcgg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
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| T |
34899129 |
ctcctaacccttcctcccagaccgcaaccgtgttcataggccttttgaaactcccacaccctcaccccacattcctgtccagcccacagctgtgtttcgg |
34899228 |
T |
|
| Q |
101 |
tacatgcaatgtttctgaggaatttccctacctgagtctcccttaacggatgaggccttaactcaagacatggcggtctcccaggatgaacggccattct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34899229 |
tacatgcaatgtttctgaggaatttccctacctgagtctcccttaacggatgaggccttaactcaagacatggcggtctcccaggatgaacggccattct |
34899328 |
T |
|
| Q |
201 |
aataggagccttaaagactccagttccgccaccgctgccaataaattcttgcaatggctgataatgagacaaatcatcagaaatcccaccactttcaatg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34899329 |
aataggagccttaaagactccagttccgccaccgctgccaataaattcttgcaatggctgataatgagacaaatcatcagaaatcccaccactttcaatg |
34899428 |
T |
|
| Q |
301 |
tagtcct |
307 |
Q |
| |
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||||||| |
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| T |
34899429 |
tagtcct |
34899435 |
T |
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