View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9403_low_8 (Length: 380)

Name: NF9403_low_8
Description: NF9403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9403_low_8
NF9403_low_8
[»] chr7 (49 HSPs)
chr7 (165-375)||(11685331-11685541)
chr7 (1-295)||(45464689-45464983)
chr7 (1-141)||(11684069-11684209)
chr7 (165-298)||(34784308-34784441)
chr7 (1-295)||(4321375-4321667)
chr7 (4-294)||(2168358-2168649)
chr7 (180-295)||(34692439-34692554)
chr7 (3-340)||(38614341-38614669)
chr7 (66-295)||(1547241-1547467)
chr7 (14-299)||(3690440-3690725)
chr7 (186-295)||(30108857-30108966)
chr7 (1-295)||(48302444-48302738)
chr7 (14-296)||(36756398-36756681)
chr7 (14-296)||(36762195-36762478)
chr7 (224-295)||(19712014-19712085)
chr7 (1-156)||(30109024-30109179)
chr7 (165-296)||(36766074-36766205)
chr7 (166-280)||(40785216-40785330)
chr7 (1-295)||(23954806-23955099)
chr7 (1-280)||(46994970-46995249)
chr7 (165-299)||(46810995-46811129)
chr7 (185-299)||(7403476-7403590)
chr7 (165-293)||(8421712-8421840)
chr7 (273-373)||(19712098-19712198)
chr7 (180-298)||(13036191-13036309)
chr7 (165-299)||(45360929-45361062)
chr7 (165-293)||(35342722-35342850)
chr7 (165-297)||(37791965-37792097)
chr7 (164-298)||(23904917-23905052)
chr7 (165-295)||(6605032-6605162)
chr7 (165-299)||(13169302-13169435)
chr7 (165-299)||(39857999-39858133)
chr7 (165-295)||(47384608-47384738)
chr7 (51-156)||(48705396-48705499)
chr7 (9-94)||(40785079-40785164)
chr7 (165-237)||(48850929-48851001)
chr7 (243-298)||(12904046-12904101)
chr7 (180-298)||(48311427-48311543)
chr7 (209-299)||(3921007-3921096)
chr7 (108-195)||(12903939-12904026)
chr7 (165-295)||(38549845-38549975)
chr7 (166-298)||(22155495-22155626)
chr7 (166-298)||(22211410-22211541)
chr7 (165-297)||(38472573-38472705)
chr7 (167-298)||(34775362-34775493)
chr7 (78-132)||(8421867-8421921)
chr7 (304-350)||(34784243-34784289)
chr7 (231-287)||(27956933-27956988)
chr7 (262-298)||(48227707-48227743)
[»] chr8 (43 HSPs)
chr8 (165-373)||(11031620-11031828)
chr8 (1-295)||(40019448-40019742)
chr8 (87-298)||(25356622-25356834)
chr8 (1-286)||(28432520-28432804)
chr8 (1-299)||(33369050-33369350)
chr8 (165-295)||(10269206-10269336)
chr8 (9-299)||(461467-461756)
chr8 (9-295)||(33158951-33159236)
chr8 (165-295)||(9186302-9186432)
chr8 (1-298)||(9876065-9876361)
chr8 (1-298)||(38881691-38881991)
chr8 (165-295)||(10268093-10268223)
chr8 (65-295)||(44620244-44620472)
chr8 (14-299)||(1321829-1322115)
chr8 (167-299)||(10770636-10770768)
chr8 (193-298)||(25373335-25373440)
chr8 (218-299)||(25705571-25705652)
chr8 (44-299)||(42895061-42895317)
chr8 (165-295)||(15684048-15684178)
chr8 (192-298)||(25402504-25402610)
chr8 (192-298)||(25707013-25707119)
chr8 (165-270)||(12515395-12515499)
chr8 (180-299)||(11719746-11719865)
chr8 (232-299)||(25370798-25370865)
chr8 (275-373)||(9186447-9186545)
chr8 (165-298)||(17807313-17807446)
chr8 (165-296)||(11790496-11790627)
chr8 (165-299)||(31823142-31823276)
chr8 (165-299)||(32823938-32824072)
chr8 (11-156)||(25371636-25371781)
chr8 (1-280)||(33748644-33748923)
chr8 (180-299)||(24527184-24527303)
chr8 (181-299)||(37525149-37525267)
chr8 (165-299)||(41041032-41041166)
chr8 (165-298)||(13484831-13484964)
chr8 (9-94)||(37525333-37525418)
chr8 (87-199)||(8655640-8655752)
chr8 (284-373)||(10267997-10268086)
chr8 (165-298)||(41824261-41824394)
chr8 (165-293)||(31199781-31199909)
chr8 (165-298)||(22273535-22273668)
chr8 (165-297)||(29693963-29694095)
chr8 (14-61)||(32823816-32823863)
[»] chr3 (40 HSPs)
chr3 (77-297)||(30501391-30501610)
chr3 (91-295)||(40962981-40963184)
chr3 (1-299)||(26448037-26448332)
chr3 (1-297)||(1847166-1847462)
chr3 (1-297)||(32842721-32843017)
chr3 (65-291)||(49494787-49495011)
chr3 (1-295)||(41945606-41945898)
chr3 (1-299)||(48634875-48635173)
chr3 (10-299)||(24382004-24382293)
chr3 (180-295)||(37865676-37865791)
chr3 (18-280)||(31885827-31886088)
chr3 (165-299)||(2975749-2975883)
chr3 (186-295)||(33051144-33051253)
chr3 (1-299)||(35861831-35862129)
chr3 (1-123)||(37886239-37886361)
chr3 (1-199)||(23775155-23775353)
chr3 (14-299)||(18429030-18429314)
chr3 (1-197)||(33112233-33112429)
chr3 (14-299)||(45255773-45256058)
chr3 (14-280)||(33851291-33851555)
chr3 (1-141)||(45897487-45897628)
chr3 (1-127)||(2975887-2976012)
chr3 (165-298)||(2378576-2378709)
chr3 (165-298)||(42282135-42282268)
chr3 (73-280)||(10380511-10380719)
chr3 (165-299)||(610850-610984)
chr3 (165-295)||(51686013-51686143)
chr3 (165-298)||(17516608-17516741)
chr3 (165-298)||(21350257-21350390)
chr3 (165-298)||(30598658-30598791)
chr3 (167-299)||(44268301-44268432)
chr3 (165-299)||(23887489-23887622)
chr3 (165-299)||(27897512-27897646)
chr3 (165-298)||(23875963-23876095)
chr3 (304-373)||(30501298-30501367)
chr3 (173-298)||(45897342-45897467)
chr3 (302-373)||(7589469-7589540)
chr3 (165-299)||(23291889-23292023)
chr3 (1-42)||(13466614-13466655)
chr3 (304-364)||(40963210-40963270)
[»] chr2 (30 HSPs)
chr2 (1-295)||(11021825-11022119)
chr2 (1-295)||(28247680-28247974)
chr2 (165-295)||(363354-363485)
chr2 (6-295)||(11313127-11313402)
chr2 (3-295)||(38149543-38149836)
chr2 (165-295)||(7744932-7745062)
chr2 (87-297)||(10715400-10715607)
chr2 (165-298)||(17948601-17948734)
chr2 (172-295)||(2359394-2359516)
chr2 (1-299)||(37418269-37418569)
chr2 (17-298)||(42880329-42880610)
chr2 (1-295)||(35575-35869)
chr2 (165-299)||(34400628-34400762)
chr2 (165-299)||(42517877-42518011)
chr2 (165-293)||(15373554-15373683)
chr2 (38-198)||(40150664-40150825)
chr2 (87-299)||(40152135-40152346)
chr2 (166-298)||(17697776-17697903)
chr2 (165-299)||(19907036-19907170)
chr2 (14-132)||(42002990-42003108)
chr2 (165-293)||(41708097-41708225)
chr2 (165-279)||(26581316-26581430)
chr2 (218-299)||(16377082-16377163)
chr2 (284-366)||(363509-363585)
chr2 (243-298)||(4047703-4047758)
chr2 (1-36)||(10715644-10715679)
chr2 (257-298)||(161813-161854)
chr2 (253-298)||(2359542-2359587)
chr2 (165-237)||(14387765-14387837)
chr2 (165-293)||(31474719-31474847)
[»] chr1 (27 HSPs)
chr1 (1-295)||(5784372-5784666)
chr1 (65-295)||(51123115-51123342)
chr1 (1-295)||(11152837-11153130)
chr1 (1-298)||(42558248-42558534)
chr1 (165-282)||(25172701-25172818)
chr1 (14-299)||(45379374-45379658)
chr1 (14-293)||(44158807-44159088)
chr1 (1-299)||(31803202-31803500)
chr1 (1-299)||(46637056-46637353)
chr1 (14-299)||(42135761-42136045)
chr1 (167-299)||(6576774-6576906)
chr1 (14-299)||(35478378-35478660)
chr1 (165-299)||(50554500-50554634)
chr1 (168-299)||(33679549-33679680)
chr1 (165-299)||(31237139-31237273)
chr1 (165-298)||(18058121-18058254)
chr1 (9-132)||(18183063-18183185)
chr1 (165-295)||(15105986-15106116)
chr1 (165-298)||(6817200-6817333)
chr1 (166-248)||(18180818-18180900)
chr1 (165-298)||(45045232-45045365)
chr1 (165-280)||(27952167-27952282)
chr1 (165-299)||(2870712-2870845)
chr1 (165-299)||(3012175-3012309)
chr1 (14-132)||(33679696-33679814)
chr1 (304-373)||(25172876-25172945)
chr1 (257-295)||(33599542-33599580)
[»] chr4 (34 HSPs)
chr4 (1-295)||(39922512-39922806)
chr4 (1-295)||(39084657-39084951)
chr4 (1-295)||(39190324-39190618)
chr4 (1-295)||(42879576-42879870)
chr4 (1-295)||(43778681-43778973)
chr4 (1-295)||(5485557-5485851)
chr4 (1-295)||(44993100-44993394)
chr4 (165-294)||(13438146-13438275)
chr4 (99-284)||(25994708-25994897)
chr4 (165-295)||(230740-230869)
chr4 (4-295)||(32653139-32653430)
chr4 (1-299)||(4519971-4520270)
chr4 (14-280)||(44556917-44557183)
chr4 (166-238)||(39294553-39294625)
chr4 (15-299)||(27626246-27626530)
chr4 (9-298)||(51041027-51041314)
chr4 (185-297)||(28100865-28100977)
chr4 (165-297)||(13449984-13450107)
chr4 (272-375)||(39294645-39294748)
chr4 (165-299)||(2691684-2691818)
chr4 (165-298)||(20820290-20820423)
chr4 (21-299)||(35997284-35997568)
chr4 (165-293)||(47942413-47942541)
chr4 (165-298)||(54387537-54387670)
chr4 (165-280)||(44793243-44793358)
chr4 (165-299)||(11254378-11254512)
chr4 (208-293)||(10544693-10544778)
chr4 (218-299)||(26397635-26397715)
chr4 (165-298)||(49524394-49524527)
chr4 (13-103)||(10544515-10544605)
chr4 (165-299)||(35402069-35402202)
chr4 (272-350)||(230650-230728)
chr4 (261-298)||(42982211-42982248)
chr4 (262-298)||(20494146-20494182)
[»] chr6 (12 HSPs)
chr6 (1-295)||(17950853-17951146)
chr6 (5-295)||(35174674-35174964)
chr6 (1-297)||(17936042-17936339)
chr6 (1-295)||(34344830-34345123)
chr6 (167-295)||(4289710-4289838)
chr6 (173-346)||(31210129-31210313)
chr6 (165-299)||(33277101-33277234)
chr6 (165-298)||(7371453-7371586)
chr6 (173-297)||(30639903-30640027)
chr6 (180-299)||(11356803-11356922)
chr6 (218-295)||(33267342-33267419)
chr6 (209-285)||(14337985-14338061)
[»] chr5 (30 HSPs)
chr5 (165-299)||(1344478-1344612)
chr5 (1-295)||(42619581-42619869)
chr5 (170-373)||(24497749-24497970)
chr5 (1-299)||(38176923-38177221)
chr5 (1-299)||(38204147-38204445)
chr5 (1-299)||(18726853-18727152)
chr5 (1-295)||(35291343-35291632)
chr5 (1-280)||(40330016-40330296)
chr5 (165-297)||(1343482-1343614)
chr5 (65-295)||(27350095-27350322)
chr5 (1-299)||(32089423-32089725)
chr5 (1-280)||(32836186-32836464)
chr5 (65-299)||(6116465-6116700)
chr5 (1-142)||(43317176-43317317)
chr5 (165-299)||(18623765-18623899)
chr5 (1-141)||(18341605-18341745)
chr5 (165-299)||(32134556-32134690)
chr5 (17-280)||(35400226-35400489)
chr5 (165-298)||(34328466-34328600)
chr5 (165-298)||(12738337-12738470)
chr5 (165-298)||(12801160-12801293)
chr5 (165-298)||(27077123-27077256)
chr5 (165-298)||(33257426-33257559)
chr5 (168-286)||(41494167-41494285)
chr5 (218-299)||(30464263-30464344)
chr5 (218-298)||(28035772-28035852)
chr5 (209-299)||(28821770-28821860)
chr5 (261-295)||(29620495-29620529)
chr5 (261-297)||(8541036-8541072)
chr5 (218-298)||(19998149-19998229)
[»] scaffold0006 (1 HSPs)
scaffold0006 (65-293)||(37856-38082)
[»] scaffold0070 (1 HSPs)
scaffold0070 (78-299)||(57669-57890)
[»] scaffold1041 (2 HSPs)
scaffold1041 (232-299)||(2643-2710)
scaffold1041 (232-299)||(2356-2423)
[»] scaffold0722 (1 HSPs)
scaffold0722 (170-299)||(4446-4574)
[»] scaffold0564 (1 HSPs)
scaffold0564 (165-298)||(9533-9666)
[»] scaffold0345 (1 HSPs)
scaffold0345 (180-299)||(1164-1283)


Alignment Details
Target: chr7 (Bit Score: 163; Significance: 6e-87; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 165 - 375
Target Start/End: Original strand, 11685331 - 11685541
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||    
T  11685331 attaggttttgaagctttttgaattggtgaagaacgttacctctaattattgaaagaaattttggagattttggagtgtagattacagattgtaaaatta 11685430  T
Q  265 gggttccaattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattag 364  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||    
T  11685431 gggttccaattttatatatttgggggagaaagagcaaagcattttctacaaatcaatcaatttgatccttggaaattttggtcgctatcgaccacattag 11685530  T
Q  365 tctctgcttct 375  Q
    || ||||||||    
T  11685531 tccctgcttct 11685541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 45464689 - 45464983
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| |||||    
T  45464689 tcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttagatt 45464788  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || |||| | |||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||    
T  45464789 caatttcaacagtattgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttggggaagaacg 45464888  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  |||||||||||||||| |||||  |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  45464889 tgacccttaattattgaaagaaaatttggagattttggagtgtagattacacattgtaaaattagagttccaattttatatatttgaggaagaaa 45464983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 11684069 - 11684209
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgc-ttttgcccttacacccacccctcatcatttcagat 99  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| ||||||||||||||||| |||    
T  11684069 tcaagtactctcacatcaccattaaacatggagcttaaagatgaagctcgactttcataattgctttttgcccttaca-ccacccctcatcatttcggat 11684167  T
Q  100 tcaaattgaacaattttgcttgaagaaattttggtgattttg 141  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  11684168 tcaaattgaacaattttgcttgaagaaattttggggattttg 11684209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 165 - 298
Target Start/End: Complemental strand, 34784441 - 34784308
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||| | |||||||||  |||||||||||||||||| | ||||||||||||    
T  34784441 attagggtttggagttttttgaattggggaagaacgttaccactaattattgacataaattttggagattttggagtgtagattaaagattgtaaaatta 34784342  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    |||||||||||||||||||||| |||||||||||    
T  34784341 gggttccaattttatatatttggggaagaaagag 34784308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 4321667 - 4321375
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||| ||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||||| |||||||| |||||    
T  4321667 tcaagcactctcacatcaacattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacccc-catcattttagatt 4321569  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || || | |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||    
T  4321568 caatttcaatagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaa-attagggtttgcaattttttgatttggggaagaacg 4321470  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  ||||||||| |||||| ||| |  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  4321469 tgacccttaattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 4321375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 4 - 294
Target Start/End: Original strand, 2168358 - 2168649
Alignment:
Q  4 agcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttg--cccttacacccacccctcatcatttcagattc 101  Q
    |||||||| ||||||||||||||| |||||||| ||||||||||| ||||||||||| |  ||||   ||| ||  |||||||| |||||||| ||||||    
T  2168358 agcactctgacatcaccattaaacttggagcttgaagataaagctcgactttcataactattttttttcccatattcccacccc-catcattttagattc 2168456  T
Q  102 aaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgt 201  Q
    || || || | |||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||||||| |||||||||||| |||||||      
T  2168457 aatttcaatagttttgcttcaagaaattttgaggattttggctttcagattcaatacgaaaaaattagggtttgaagttttttgaattggagaagaactg 2168556  T
Q  202 taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 294  Q
     || ||| ||||||| | ||||||||||  ||||| ||||||||||| || |||||  |||||||||| |||||||||| | ||| |||||||    
T  2168557 gactacttattattggaggaaattttggtgattttagagtgtagattgcagattgtgtaattagggttacaattttatacaattggggaagaa 2168649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 295
Target Start/End: Original strand, 34692439 - 34692554
Alignment:
Q  180 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 279  Q
    ||||||| |||||||||||||| |||||||||||||| |||||| |||||  |||||||||||||||||| | |||||||||||||||||||||||||||    
T  34692439 tttttgatttggggaagaacgtgaccactaattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttat 34692538  T
Q  280 atatttgaggaagaaa 295  Q
    ||||||| ||||||||    
T  34692539 atatttggggaagaaa 34692554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 3 - 340
Target Start/End: Original strand, 38614341 - 38614669
Alignment:
Q  3 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 102  Q
    |||||||||||||||||||||| || |||||||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| ||||||||||||||||    
T  38614341 aagcactctcacatcaccattagacttggagcttgaagatgaagctcgactttcataactgttttttcccatattcccacccc-catcatttcagattca 38614439  T
Q  103 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgtt 202  Q
    | || || | |||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||||||| ||||||||| || |||||||       
T  38614440 atttcaatagttttgcttcaagaaattttgaggattttggctttcagattcaatacgaaaaaattagggtttgaagttttttgaatcggagaagaactgg 38614539  T
Q  203 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagcaaa 302  Q
    |||||| ||||||| | ||||||||||  ||||       |||||| || |||||  ||||||| ||||||||||||| |  || |||||||||  ||||    
T  38614540 accacttattattggaggaaattttggtgattt-------tagattgcagattgtgtaattaggattccaattttatacagctggggaagaaag-ccaaa 38614631  T
Q  303 gcattttctacaaatcaattaatttgatccttggaaat 340  Q
     |||||||| ||||||||| |||||  ||||| |||||    
T  38614632 acattttctgcaaatcaatcaatttagtcctttgaaat 38614669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 66 - 295
Target Start/End: Original strand, 1547241 - 1547467
Alignment:
Q  66 tttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnnt 164  Q
    ||||||| |||||||||||| |||||||||  |||||| |  |||| ||||| |||||| |||||||| ||||||   |||||| |||||||            
T  1547241 tttgcccatacacccacccc-catcatttcgtattcaattacaacagttttgtttgaaggaattttggggatttttttatttcgaattcaatcaaaaa-- 1547337  T
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||| | | ||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||| | ||||||||||||    
T  1547338 attagggtttgaggttatttcaatcggggaagaacgttaccactaattattgaaagaa-ttttgggaattttagagtgtggattaaagattgtaaaatta 1547436  T
Q  265 gggttccaattttatatatttgaggaagaaa 295  Q
    ||||| |||||||||| ||||| ||||||||    
T  1547437 gggtttcaattttatacatttggggaagaaa 1547467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 14 - 299
Target Start/End: Complemental strand, 3690725 - 3690440
Alignment:
Q  14 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 113  Q
    |||||||| ||||| |||||||| ||||| |||||||||||||||||    |||| ||| ||  ||||||||   ||||||||||||||| || || | |    
T  3690725 catcaccactaaacttggagcttgaagatgaagcttgactttcataacaattttttcccatattcccaccccatttcatttcagattcaatttcaatagt 3690626  T
Q  114 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 213  Q
    ||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||| ||| ||||||||||||||||||||   |||||| ||||    
T  3690625 tttgcttcaagaaattttgtggattttggctttcagattcaatacgaaaaaattagggtttcaagttttttgaattggggaagaactggaccacttatta 3690526  T
Q  214 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    ||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||||||||||||| | ||| |||||| |||||    
T  3690525 ttggaggaaatttaggtgattttagaatgtagattgcaaattgtgtaattagggttccaattttatacaattggggaagacagagc 3690440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 186 - 295
Target Start/End: Complemental strand, 30108966 - 30108857
Alignment:
Q  186 aattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 285  Q
    |||||||||||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30108966 aattggggaagaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatattt 30108867  T
Q  286 gaggaagaaa 295  Q
    | ||||||||    
T  30108866 ggggaagaaa 30108857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 48302738 - 48302444
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||||||||||||||||||||||||||   | ||||| || ||||||||| |||  |  |||||||| ||   |||||||  |||||||  | ||    
T  48302738 tcaagcactctcacatcaccattaaacatggaagatgaagatgaaacttgactttgatagctctttttgcccatatgaccacccccaatcatttttgttt 48302639  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || |||| |||||||||||  |||||||  |||||||  ||||  |||||||        ||||||||||| |  ||||||| |||||||||||||    
T  48302638 caatttcaacagttttgcttgaatgaattttgaagattttggttttcatattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacg 48302539  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | ||   ||||||||| ||| || |||||  ||||||||||||||| |||| ||||||||||||| ||| |||||||||||||||| ||||||||    
T  48302538 tgactcttaattattggaagcaaatttggagattttggagtgtagaatacacattgtaaaattagagtttcaattttatatatttggggaagaaa 48302444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 296
Target Start/End: Original strand, 36756398 - 36756681
Alignment:
Q  14 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 113  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||| ||  |||||||| ||||||||  ||||  | || || | |    
T  36756398 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcccatattcccaccccccatcattttggattttatttcaatagt 36756497  T
Q  114 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaatt 212  Q
    ||||||| |||||||||||  || ||||  |||  ||||||||        | ||||||||||||| ||||||||||||||||||||   |||||| |||    
T  36756498 tttgcttcaagaaattttgaggaatttggttttatgattcaatacgaaaaaaattagggtttgaagttttttgaattggggaagaactaaaccacttatt 36756597  T
Q  213 attgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 296  Q
    |||| | ||||||| ||  ||||| ||||||||||| || |||||  |||||||||| |||||||||| | ||| |||||||||    
T  36756598 attggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattagggtttcaattttatacaattggggaagaaag 36756681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 296
Target Start/End: Original strand, 36762195 - 36762478
Alignment:
Q  14 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 113  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||| ||  |||||||| ||||||||  ||||  | || || | |    
T  36762195 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcccatattcccaccccccatcattttggattttatttcaatagt 36762294  T
Q  114 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaatt 212  Q
    ||||||| |||||||||||  || ||||  |||  ||||||||        | ||||||||||||| ||||||||||||||||||||   |||||| |||    
T  36762295 tttgcttcaagaaattttgaggaatttggttttatgattcaatacgaaaaaaattagggtttgaagttttttgaattggggaagaactaaaccacttatt 36762394  T
Q  213 attgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 296  Q
    |||| | ||||||| ||  ||||| ||||||||||| || |||||  |||||||||| |||||||||| | ||| |||||||||    
T  36762395 attggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattagggtttcaattttatacaattggggaagaaag 36762478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 19712014 - 19712085
Alignment:
Q  224 ttttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  19712014 ttttggaaattttggagtgtagattacagattgtaaaattagggttccaattttatatatttggggaagaaa 19712085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 30109179 - 30109024
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||  | ||||| |||||||||||| ||| ||  |||||||| ||   ||||| | |||||||| |||||    
T  30109179 tcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagttctttttgcccatatgaccacctcccatcattttagatt 30109080  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat 156  Q
    ||| || |||| |||||||||||  |||||||  |||||||| |||| ||||||||    
T  30109079 caatttcaacagttttgcttgaatgaattttgcagattttgattttcagattcaat 30109024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 165 - 296
Target Start/End: Original strand, 36766074 - 36766205
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || |||||| |||||    
T  36766074 attagggtttgaagttttttgaattggggaagaactaaaccacttattattggaggaaatttaggtgattttagagtgtagattgcagattgtataatta 36766173  T
Q  265 gggttccaattttatatatttgaggaagaaag 296  Q
    ||||| |||||||||| | ||| |||||||||    
T  36766174 gggtttcaattttatacaattggggaagaaag 36766205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 166 - 280
Target Start/End: Original strand, 40785216 - 40785330
Alignment:
Q  166 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 265  Q
    ||||||||||||| ||||||||||||||||||||   |||||| |||| || | ||||||||||  ||||||||||||||||| || |||||| ||||||    
T  40785216 ttagggtttgaagatttttgaattggggaagaactggaccacttattagtggaggaaattttggtgattttggagtgtagattgcagattgtacaattag 40785315  T
Q  266 ggttccaattttata 280  Q
    |||| ||||||||||    
T  40785316 ggttacaattttata 40785330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 23954806 - 23955099
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||||| ||| ||||||||||| |||||||  ||||| ||||| || |||||||| || ||||  || ||  | |||||| | ||||||||||||    
T  23954806 tcaagcactctaacaacaccattaaacttggagctcgaagatgaagctcgattttcataactgtttttttccatattctcacccc-cgtcatttcagatt 23954904  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    |||  | || | |||||||| |||||||||||  ||||||   |||| ||||||||        |||||||||||||| || ||||||||| |||||||     
T  23954905 caatgtcaatagttttgcttcaagaaattttgaggattttagctttcagattcaataccaagaaattagggtttgaagtttgttgaattggcgaagaact 23955004  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
      |||||| ||||||| | |||||||| |  ||||| ||||||||| |  | |||||  ||||||||||||||||||||| | ||| ||||||||    
T  23955005 ggaccacttattattggaggaaatttttgttattttagagtgtagactgaagattgtgtaattagggttccaattttatacaattggggaagaaa 23955099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 46995249 - 46994970
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||  | || |  || ||  |||||||| ||||||||||||||    
T  46995249 tcaagcactctcacaacaccattaaacttggagcttgaagatgaagcttgactttcataaccg-ttatttccatattcccaccccacatcatttcagatt 46995151  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaattggggaagaac 199  Q
    ||| || || | |||||||| |||||||||||  |||| ||  ||||  ||||| |         ||||||||||| || |||||||||||||| |||||    
T  46995150 caatttcaatagttttgcttcaagaaattttgaggattctggctttcaaattcactacgaaaaaaattagggtttggagttttttgaattggggcagaac 46995051  T
Q  200 gttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 280  Q
       |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  ||||| |||||||||||||||    
T  46995050 tgaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaattaaggttccaattttata 46994970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 46811129 - 46810995
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || | |||  |||||    
T  46811129 attagggtttgaagttttttgaattggggaagaactggaccacttattattggaggaaatttaggtgattttagagtgtagattgcagactgtgtaatta 46811030  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    | |||||||||||||| | ||| | ||||||||||    
T  46811029 gagttccaattttatacaattgggaaagaaagagc 46810995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 185 - 299
Target Start/End: Original strand, 7403476 - 7403590
Alignment:
Q  185 gaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 284  Q
    ||||||| ||||||||||  ||  ||||| || ||||||| ||||  |||||||| | ||||||||||||||||||| |||||||||||||| ||| |||    
T  7403476 gaattggagaagaacgttgtcatcaattaatggaagaaatcttggagattttggactctagattacatattgtaaaactagggttccaatttaatagatt 7403575  T
Q  285 tgaggaagaaagagc 299  Q
    || | ||||||||||    
T  7403576 tgggaaagaaagagc 7403590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 293
Target Start/End: Complemental strand, 8421840 - 8421712
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  8421840 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 8421741  T
Q  265 gggttccaattttatatatttgaggaaga 293  Q
    ||||| |||||||||||| ||| ||||||    
T  8421740 gggtttcaattttatataattggggaaga 8421712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 273 - 373
Target Start/End: Original strand, 19712098 - 19712198
Alignment:
Q  273 attttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgct 372  Q
    |||||||||||||| ||||||||| ||||| ||||||| ||||||||||||||||  ||||| ||| || |||||||| ||  | | |||||||||||||    
T  19712098 attttatatatttggggaagaaagggcaaaacattttcaacaaatcaattaatttagtcctttgaagttatggtcactatcagctaaattagtctctgct 19712197  T
Q  373 t 373  Q
    |    
T  19712198 t 19712198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 298
Target Start/End: Original strand, 13036191 - 13036309
Alignment:
Q  180 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 279  Q
    |||||||||||||||||||| ||  ||  ||||| || ||||||||||||| |||||| | | ||| | ||| ||| |||||| ||| |||||| |||||    
T  13036191 tttttgaattggggaagaactttgtcatcaattaatggaagaaattttggggattttgaactctaggtgacaaattataaaataaggattccaaatttat 13036290  T
Q  280 atatttgaggaagaaagag 298  Q
    ||||||| |||||||||||    
T  13036291 atatttggggaagaaagag 13036309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 299
Target Start/End: Original strand, 45360929 - 45361062
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  |||| ||| ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  45360929 attagggttttaagttttttgaattggggaagaacattgacatcaattcttgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 45361028  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||| |||| ||||||| ||||||||||||    
T  45361029 gggttccaaattta-atatttggggaagaaagagc 45361062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 165 - 293
Target Start/End: Complemental strand, 35342850 - 35342722
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| ||||||||||||||||||||   || ||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  35342850 attagggttttaagttttttgaattggggaagaactggactacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 35342751  T
Q  265 gggttccaattttatatatttgaggaaga 293  Q
    |||||||||||||||| | ||| ||||||    
T  35342750 gggttccaattttatacaattggggaaga 35342722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 165 - 297
Target Start/End: Complemental strand, 37792097 - 37791965
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| || |||  | ||   | |||||||||| || |||||| | | ||| | ||| ||| ||| ||||    
T  37792097 attagggttttaagttttttgaattggggaagaactttgccataagttcagggaagaaatttttgggattttgaactctaggtgacaaattataacatta 37791998  T
Q  265 gggttccaattttatatatttgaggaagaaaga 297  Q
    ||||||||| |||||||||||| ||||||||||    
T  37791997 gggttccaaatttatatatttggggaagaaaga 37791965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 298
Target Start/End: Complemental strand, 23905052 - 23904917
Alignment:
Q  164 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 263  Q
    ||||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| |||    
T  23905052 tattagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctagttgacaaattataacatt 23904953  T
Q  264 agggttccaattttatatattt-gaggaagaaagag 298  Q
    |||||||||| ||||||||||| | |||||||||||    
T  23904952 agggttccaaatttatatatttgggggaagaaagag 23904917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 165 - 295
Target Start/End: Original strand, 6605032 - 6605162
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||| ||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  6605032 attagggttttaagttttttgaattggggaaaaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtaacaaattataacatta 6605131  T
Q  265 gggttccaattttatatatttgaggaagaaa 295  Q
    ||||||||| |||||||||||| ||||||||    
T  6605132 gggttccaaatttatatatttggggaagaaa 6605162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 165 - 299
Target Start/End: Original strand, 13169302 - 13169435
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  13169302 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 13169401  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||| ||||| |||||||||||| ||||||||||||    
T  13169402 ggg-tccaaatttatatatttggggaagaaagagc 13169435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 39858133 - 39857999
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||| ||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  39858133 attagggttttaagttttttgaattggtgaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 39858034  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||| | |||||||||||| ||||||||||||    
T  39858033 gggttccgaatttatatatttggggaagaaagagc 39857999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 165 - 295
Target Start/End: Complemental strand, 47384738 - 47384608
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || |||| |||||||| |||||| | | ||| | ||| ||| ||| ||||    
T  47384738 attagggttttaagttttttgaattggggaagaactttgacatcaattcatggaagacattttggggattttgaactctaggtgacaaattataacatta 47384639  T
Q  265 gggttccaattttatatatttgaggaagaaa 295  Q
    ||||||||| |||||||| ||| ||||||||    
T  47384638 gggttccaaatttatataattggggaagaaa 47384608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 156
Target Start/End: Original strand, 48705396 - 48705499
Alignment:
Q  51 actttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcgga 150  Q
    ||||| ||||||  |||||||| ||  ||||||||  |||||||| ||||||| ||||||| ||||||||||||||||| ||| |||| ||  |||||||    
T  48705396 actttgataattctttttgcccatatgcccacccc--atcatttcggattcaatttgaacagttttgcttgaagaaattatggagattctggttttcgga 48705493  T
Q  151 ttcaat 156  Q
    ||||||    
T  48705494 ttcaat 48705499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 40785079 - 40785164
Alignment:
Q  9 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 94  Q
    ||||||||||||||||||| |||||||| ||||  ||||| |||||||||||||| ||||  || ||  |||||||| ||||||||    
T  40785079 tctcacatcaccattaaacttggagcttgaagaagaagctcgactttcataattgtttttttccatattcccaccccccatcattt 40785164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 237
Target Start/End: Complemental strand, 48851001 - 48850929
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttg 237  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||| || ||||||||||||||||||||    
T  48851001 attagggttttaagttttttgaattggggaagaactttggcatcaattaatggaagaaattttgggaattttg 48850929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 12904046 - 12904101
Alignment:
Q  243 tagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||  ||||||||||    
T  12904046 tagattacagattgtaaaattagggttcaaattttatagatttggagaagaaagag 12904101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 298
Target Start/End: Original strand, 48311427 - 48311543
Alignment:
Q  180 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 279  Q
    |||||||||||||||||||| ||  ||  ||||| |||||||||||||| | |||||| | | ||| | ||| ||| |||||||| ||||||||   |||    
T  48311427 tttttgaattggggaagaactttgtcatcaattaatgaaagaaattttgaggattttgaattctaggtgacaaattataaaattaaggttccaa--atat 48311524  T
Q  280 atatttgaggaagaaagag 298  Q
    ||||||| |||||||||||    
T  48311525 atatttggggaagaaagag 48311543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 299
Target Start/End: Complemental strand, 3921096 - 3921007
Alignment:
Q  209 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||| || ||||||||||||| |||||| | | ||||||||| |||||| ||||| |||| |||||||||| ||| | ||||||||||||    
T  3921096 aattaatggaagaaattttggggattttgtactatagattacagattgtagaatta-ggtttcaattttatagattcggggaagaaagagc 3921007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 12903939 - 12904026
Alignment:
Q  108 aacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaa 195  Q
    |||||||||||||||||||||||||| || |||| ||||||| ||||||        |||||||||||| | |||| |||||||||||    
T  12903939 aacaattttgcttgaagaaattttggagactttggatttcgggttcaataaaaacaaattagggtttgacgtttttagaattggggaa 12904026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 295
Target Start/End: Complemental strand, 38549975 - 38549845
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||| ||| ||| |||||||||||||||||||| ||   |  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| ||| ||||    
T  38549975 attaggattttaagttttttgaattggggaagaactttggtatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataacatta 38549876  T
Q  265 gggttccaattttatatatttgaggaagaaa 295  Q
    ||||||||| |||||||||||  ||||||||    
T  38549875 gggttccaaatttatatatttagggaagaaa 38549845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 298
Target Start/End: Original strand, 22155495 - 22155626
Alignment:
Q  166 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 265  Q
    ||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||  | ||| ||| ||| ||||     
T  22155495 ttagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaagtgacaaattataacattaa 22155594  T
Q  266 ggttccaattttatatatttgaggaagaaagag 298  Q
    |||||||| |||||||||||| |||||||||||    
T  22155595 ggttccaa-tttatatatttggggaagaaagag 22155626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 298
Target Start/End: Original strand, 22211410 - 22211541
Alignment:
Q  166 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 265  Q
    ||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||  | ||| ||| ||| ||||     
T  22211410 ttagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaagtgacaaattataacattaa 22211509  T
Q  266 ggttccaattttatatatttgaggaagaaagag 298  Q
    |||||||| |||||||||||| |||||||||||    
T  22211510 ggttccaa-tttatatatttggggaagaaagag 22211541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 297
Target Start/End: Complemental strand, 38472705 - 38472573
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||  ||| |||||| | | ||| | ||| ||| ||| ||||    
T  38472705 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaattcgggggattttgaactctaggtgacaaattataacatta 38472606  T
Q  265 gggttccaattttatatatttgaggaagaaaga 297  Q
     |||||||| |||||||||||| |||| |||||    
T  38472605 aggttccaaatttatatatttggggaataaaga 38472573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 298
Target Start/End: Complemental strand, 34775493 - 34775362
Alignment:
Q  167 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 266  Q
    |||||||| ||| ||| |||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||||    
T  34775493 tagggttttaagttttctgaattggggaagaacattgacatcaattcatgtaagaaatttgggagattttgaactctaggtaacaaattataacattagg 34775394  T
Q  267 gttccaattttatatatttgaggaagaaagag 298  Q
    ||||||| |||||||||||  |||||||||||    
T  34775393 gttccaaatttatatatttagggaagaaagag 34775362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 8421921 - 8421867
Alignment:
Q  78 cccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttg 132  Q
    |||||||||||||||||||||||||| || ||   |||||||| |||||||||||    
T  8421921 cccacccctcatcatttcagattcaatttcaagcgttttgcttcaagaaattttg 8421867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 350
Target Start/End: Complemental strand, 34784289 - 34784243
Alignment:
Q  304 cattttctacaaatcaattaatttgatccttggaaattttggtcact 350  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  34784289 cattttctgcaaatcaatcaatttcgtccttggaaattttggtcact 34784243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 287
Target Start/End: Original strand, 27956933 - 27956988
Alignment:
Q  231 aattttggagtgtagattacatattgtaaaattagggttccaattttatatatttga 287  Q
    |||||||||||||||||| || |||||  |||||| ||||||| |||||||||||||    
T  27956933 aattttggagtgtagattgcagattgtgtaattagagttccaa-tttatatatttga 27956988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Original strand, 48227707 - 48227743
Alignment:
Q  262 ttagggttccaattttatatatttgaggaagaaagag 298  Q
    |||||||||||| |||||||||||| |||||||||||    
T  48227707 ttagggttccaaatttatatatttggggaagaaagag 48227743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 137; Significance: 2e-71; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 165 - 373
Target Start/End: Complemental strand, 11031828 - 11031620
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| | ||||||||||||    
T  11031828 attagggtttgaagttttttgaattagggaagaacgttaccactaattattggaagaaattttggggattttggagtgtagattatagattgtaaaatta 11031729  T
Q  265 gggttccaattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattag 364  Q
    || ||||||||||||||||||| |||||||| |||||| |||||| | ||||||||| |||||  ||||||||||||||||||||| ||| ||| |||||    
T  11031728 ggcttccaattttatatatttggggaagaaaaagcaaaacattttatgcaaatcaataaatttagtccttggaaattttggtcactatcggccaaattag 11031629  T
Q  365 tctctgctt 373  Q
    |||||||||    
T  11031628 tctctgctt 11031620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 40019742 - 40019448
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| |||||    
T  40019742 tcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttagatt 40019643  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||    
T  40019642 caatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacg 40019543  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  ||||||||| |||||| |||||  ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  40019542 tgacccttaattattggaagaaaatttggagattttggggtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 40019448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 87 - 298
Target Start/End: Complemental strand, 25356834 - 25356622
Alignment:
Q  87 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttg 185  Q
    ||||||||| ||||||| || || | |||||||| |||||||||||| ||||||| ||||| ||||||||        | ||||||||||||| ||||||    
T  25356834 catcatttctgattcaatttcaatagttttgcttcaagaaattttggggattttggatttcagattcaataaaaaagaaattagggtttgaagttttttg 25356735  T
Q  186 aattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 285  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||  ||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||    
T  25356734 aattggggaagaacgttaccacttattattggaagaaattttggtgattttggagtgtagattacatatagtataattagagttccagttttatatattt 25356635  T
Q  286 gaggaagaaagag 298  Q
    | |||||||||||    
T  25356634 ggggaagaaagag 25356622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 28432804 - 28432520
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||  | ||||| || |||||||||  ||  |  |||||||| ||   ||||||| |||||||| |||||    
T  28432804 tcaagcactctcacatcaccattaaacatggaggatgaagatgaaacttgactttggtagctctttttgcccatatgaccacccc-catcattttagatt 28432706  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || ||||  ||||||||||  |||||||  |||||||  |||| ||||||||        | || |||||| |  ||||||| |||||||||||||    
T  28432705 caatttcaacagatttgcttgaatgaattttgtagattttggttttcagattcaattaaaaaaaaatacggtttgcaattttttgatttggggaagaacg 28432606  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 286  Q
    | |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28432605 tgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttg 28432520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 33369350 - 33369050
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||| |||||||||||||||||||  |||||||| |||||||||||  ||||||||||  | |||| | | ||  |||||  | ||||||||||||||    
T  33369350 tcaagcgctctcacatcaccattaaatttggagcttgaagataaagctcaactttcataaccgttttttctcatattcccacgtcccatcatttcagatt 33369251  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta--ttagggtttgaagctttttgaattggggaagaa 198  Q
    ||| || || | |||||||| ||||| ||||||  ||||||  |||| ||||||||        |  || |||||||||| |||||||||||||||||||    
T  33369250 caatttcaatagttttgcttcaagaagttttgggaattttggctttcagattcaataagaaaaaaaattcgggtttgaagttttttgaattggggaagaa 33369151  T
Q  199 cgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 298  Q
    |   |||||| ||||||| ||||| ||||||  ||||||||||||||||| || ||| |  ||||||||||||||||||||||||||| |||||||||||    
T  33369150 ctggaccacttattattggaagaagttttggtgattttggagtgtagattgcagattatgtaattagggttccaattttatatatttggggaagaaagag 33369051  T
Q  299 c 299  Q
    |    
T  33369050 c 33369050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 165 - 295
Target Start/End: Original strand, 10269206 - 10269336
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||  | ||||||||||||    
T  10269206 attagcgtttgaagttttttgaattggggaagaacgttaccactaattattggaagaaattttggggattttggtgtgtagattgtagattgtaaaatta 10269305  T
Q  265 gggttccaattttatatatttgaggaagaaa 295  Q
    || ||||||||||||||||||| | ||||||    
T  10269306 ggcttccaattttatatatttgggaaagaaa 10269336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 9 - 299
Target Start/End: Complemental strand, 461756 - 461467
Alignment:
Q  9 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattga 108  Q
    ||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || || | ||| ||  ||||| || ||||||||||||||||| || |    
T  461756 tctcacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgtttcttcccatattcccacaccccatcatttcagattcaatttca 461657  T
Q  109 acaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccact 208  Q
    | | ||||| || || ||||||||  |||||||| |||| ||||||||         ||||||||||||| ||||||||||||||||||||   ||||||    
T  461656 atagttttgtttcaa-aaattttgaggattttgactttcagattcaatgcgaaaaagttagggtttgaagatttttgaattggggaagaactggaccact 461558  T
Q  209 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
     ||||  | | ||||||||||  |||||||||||||||||  | |||||  |||||||||| |||||||||| | ||||||||||||||||    
T  461557 tattacaggaggaaattttggtgattttggagtgtagattggagattgtgtaattagggttacaattttatacaattgaggaagaaagagc 461467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 9 - 295
Target Start/End: Complemental strand, 33159236 - 33158951
Alignment:
Q  9 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattga 108  Q
    ||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||| || | |  ||||||||  |||||||||||||||| || |    
T  33159236 tctcacatcaccattaaacttggagtttgaagatgaagctcgactttcataactgctttttccat-attcccaccccctatcatttcagattcaatttca 33159138  T
Q  109 acaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccact 208  Q
    | | |||||||| || ||| ||||  |||||||| |||| ||||||||         ||||||||||||| ||||||||||||||||||||   ||||||    
T  33159137 atagttttgcttcaaaaaaatttgaggattttgactttcagattcaatgcgaaaaagttagggtttgaagatttttgaattggggaagaaccgaaccact 33159038  T
Q  209 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
     |||| || | ||||||||||  ||||||||||||||||| || |||||  |||||||||| |||||||||| | ||| ||||||||    
T  33159037 tattactggaggaaattttggtgattttggagtgtagattgcagattgtgtaattagggttacaattttatacaattggggaagaaa 33158951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 165 - 295
Target Start/End: Original strand, 9186302 - 9186432
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| ||||||||||||| |||||||||| |||||||||||| |||||||||  || |||||||||||||||||||| ||||||||||||    
T  9186302 attagggtttaaagttttttgaattgggtaagaacgttatcactaattattggaagaaatttatgggattttggagtgtagattacagattgtaaaatta 9186401  T
Q  265 gggttccaattttatatatttgaggaagaaa 295  Q
    ||||| |||||||| ||||||| ||||||||    
T  9186402 gggtttcaattttaaatatttggggaagaaa 9186432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 9876065 - 9876361
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||| |||||||  |||||||||| |||||| | ||||| |||||||||||||||||  | |||| ||| ||  |||||||| ||||||||||||||    
T  9876065 tcaagcattctcacaataccattaaacttggagcctgaagatgaagcttgactttcataacagttttttcccatattcccacccc-catcatttcagatt 9876163  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || || | |||||||| || ||||||||  |||||||  |||| |||||| |        |||||||||||||| |||||||||||||| |||||     
T  9876164 caatttcaatagttttgcttcaaaaaattttgaggattttggctttcagattcactacgaaaaaattagggtttgaagttttttgaattggggcagaact 9876263  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 298  Q
      |||||| ||||||| | |||||||| |  ||| | ||||||||||| || |||||| |||||||||| |||||||||| | ||| |||||||||||    
T  9876264 ggaccacttattattggaggaaatttttgtgattatagagtgtagattgcagattgtataattagggtttcaattttatacaattggggaagaaagag 9876361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 38881991 - 38881691
Alignment:
Q  1 tcaagcactctca--catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacc-cctcatcatttcag 97  Q
    |||||||||||||  ||||||| |||||| |||||||| ||||| ||||| |||||||||||||| |||| ||| ||  | |||| || |||||||||||    
T  38881991 tcaagcactctcatacatcaccgttaaacttggagcttgaagatgaagctcgactttcataattgttttttcccatattctcacctccccatcatttcag 38881892  T
Q  98 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 197  Q
    |||||| || || | |||||||| |||||||||||  |||||||  |||  || | |          |||||||||| ||| ||||||||||||||||||    
T  38881891 attcaatttcaatagttttgcttcaagaaattttgaggattttggcttttagaataagaaaaaaaaaattagggtttcaagttttttgaattggggaaga 38881792  T
Q  198 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 297  Q
    ||   |||||| ||||||| ||||||||| ||   |||||||||||| ||| ||||||||  ||||| ||||||||||||||||||||| ||||||||||    
T  38881791 actggaccacttattattggaagaaatttgggtggttttggagtgtacattgcatattgtgtaattaaggttccaattttatatatttggggaagaaaga 38881692  T
Q  298 g 298  Q
    |    
T  38881691 g 38881691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 165 - 295
Target Start/End: Complemental strand, 10268223 - 10268093
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||||| | |||  |||||||||||| ||||| ||||||||||| ||||||||| ||| |||||||||||||||||| | |||| |||||||    
T  10268223 attagggtttgaagttatttacattggggaagaatgttactactaattattggaagaaatttgggggattttggagtgtagattatagattgaaaaatta 10268124  T
Q  265 gggttccaattttatatatttgaggaagaaa 295  Q
    ||||||||||| |||||||||| ||||||||    
T  10268123 gggttccaattctatatatttggggaagaaa 10268093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 65 - 295
Target Start/End: Original strand, 44620244 - 44620472
Alignment:
Q  65 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnn 163  Q
    |||||||  |||||||||||| ||||||||||||||||| |  |||| ||||| |||||| |||||||| ||||||   |||| | |||||||           
T  44620244 ttttgccgatacacccacccc-catcatttcagattcaattacaacagttttgtttgaaggaattttggagatttttttattttgaattcaatcaaaaaa 44620342  T
Q  164 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 263  Q
     |||||||||||| | | ||| ||||||| |||||| |||||||||||||||| ||||| ||||| |||||||||||||| ||||| | |||||||||||    
T  44620343 -attagggtttgaggttatttcaattggg-aagaacattaccactaattattggaagaatttttgtgaattttggagtgtggattaaagattgtaaaatt 44620440  T
Q  264 agggttccaattttatatatttgaggaagaaa 295  Q
    |||||| |||||||||| ||||| ||||||||    
T  44620441 agggtttcaattttatacatttggggaagaaa 44620472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 299
Target Start/End: Original strand, 1321829 - 1322115
Alignment:
Q  14 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 113  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||    |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  1321829 catcaccattaaacttggagcttgaagatgaagctcgactttcataacaattttttcccatattcccaccccccttcatttcagattcaatttcaatagt 1321928  T
Q  114 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaatt 212  Q
    ||||||| |||||||||||  |||||||  ||||  |||||||        | ||||||||| ||| ||||||||||||||||||||   |||||| |||    
T  1321929 tttgcttcaagaaattttgtggattttggctttcatattcaatacgaaaaaaattagggtttcaagttttttgaattggggaagaactgaaccacttatt 1322028  T
Q  213 attgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    |||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||||||||||||| | ||| |||||| |||||    
T  1322029 attggaggaaatttaggtgattttagaatgtagattgcagattgtgtaattagggttccaattttatacaattggggaagacagagc 1322115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 167 - 299
Target Start/End: Complemental strand, 10770768 - 10770636
Alignment:
Q  167 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 266  Q
    |||||||||||| |||| |||||| |||| ||||||  || |||||| | |||||||||||||| |||||||||||  ||||||| ||||||||||||||    
T  10770768 tagggtttgaagtttttagaattgaggaaaaacgttgtcattaattaattaaagaaattttggggattttggagtgcggattacagattgtaaaattagg 10770669  T
Q  267 gttccaattttatatatttgaggaagaaagagc 299  Q
    | |||||||||||| ||||| ||||||||||||    
T  10770668 gctccaattttatagatttggggaagaaagagc 10770636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 193 - 298
Target Start/End: Original strand, 25373335 - 25373440
Alignment:
Q  193 gaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaag 292  Q
    |||||| ||||| ||| ||||||| ||||||||||||  ||||||||||||||||||||||| | | ||| ||||||||||||| |||||||||||||||    
T  25373335 gaagaatgttactacttattattggaagaaattttggttattttggagtgtagattacatatagcacaatcagggttccaatttcatatatttgaggaag 25373434  T
Q  293 aaagag 298  Q
    ||||||    
T  25373435 aaagag 25373440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 25705652 - 25705571
Alignment:
Q  218 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  25705652 aagaaattttggtgattttggagtgtagattacatatagtataattagggttccaattttatatatttggggaagaaagagc 25705571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 299
Target Start/End: Complemental strand, 42895317 - 42895061
Alignment:
Q  44 aagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaa 143  Q
    ||||| ||||||||| | || |||| ||| ||  |||||||| ||||||||||||||||| || || | |||||||| |||||||||||  |||||||      
T  42895317 aagctcgactttcatgactgttttttcccatattcccaccccccatcatttcagattcaatttcaatagttttgcttcaagaaattttgaggattttggc 42895218  T
Q  144 tttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtg 242  Q
    ||||  |||||||        | ||||||||||||| ||||||||||||||||||||   |||| | || |||| |||| |||||||  ||||| |||||    
T  42895217 tttcaaattcaatacgaaaaaaattagggtttgaagttttttgaattggggaagaactggaccatttataattggaagatattttggtgattttagagtg 42895118  T
Q  243 tagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    || ||| || |||||  ||||||||||||||| ||||| | ||| ||||||||||||    
T  42895117 taaattgcagattgtgtaattagggttccaatgttatacaattggggaagaaagagc 42895061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 165 - 295
Target Start/End: Complemental strand, 15684178 - 15684048
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||| ||||||  |||| ||||||||||||||||||  ||  ||||| || |||||||||| ||||||||| | | ||||||||| |||||||||||     
T  15684178 attaggttttgaaatttttagaattggggaagaacgttgtcatcaattaatggaagaaatttttggaattttgaactctagattacagattgtaaaattg 15684079  T
Q  265 gggttccaattttatatatttgaggaagaaa 295  Q
    |||||||||||||||| ||||| ||||||||    
T  15684078 gggttccaattttatagatttggggaagaaa 15684048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 192 - 298
Target Start/End: Original strand, 25402504 - 25402610
Alignment:
Q  192 ggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaa 291  Q
    ||||||| ||||| ||| ||||||| ||||||||||||  |||||||||||||||||||| || ||| ||| |||||| |||||||||||||||| ||||    
T  25402504 ggaagaatgttactacttattattggaagaaattttggttattttggagtgtagattacagatagtacaatcagggtttcaattttatatatttggggaa 25402603  T
Q  292 gaaagag 298  Q
    |||||||    
T  25402604 gaaagag 25402610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 192 - 298
Target Start/End: Original strand, 25707013 - 25707119
Alignment:
Q  192 ggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaa 291  Q
    ||||||| ||||| ||| ||||||| ||||||||||||  |||||||||||||||||||| || ||| ||| |||||| |||||||||||||||| ||||    
T  25707013 ggaagaatgttactacttattattggaagaaattttggttattttggagtgtagattacagatagtacaatcagggtttcaattttatatatttggggaa 25707112  T
Q  292 gaaagag 298  Q
    |||||||    
T  25707113 gaaagag 25707119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 12515499 - 12515395
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||||| ||||||||| |||||||||||||| | |||||||  ||| ||||||||||| |||||||||||||||||| | ||||||||||||    
T  12515499 attagggtttgaagttttttgaatcggggaagaacgttatcgctaattagggaa-gaaattttggggattttggagtgtagattaaagattgtaaaatta 12515401  T
Q  265 gggttc 270  Q
     |||||    
T  12515400 cggttc 12515395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 11719865 - 11719746
Alignment:
Q  180 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 279  Q
    |||||||||||||||||||||||  ||  ||||| || ||||||||||||| |||||||| | ||| | | | ||||||||||| |||||||||||||||    
T  11719865 tttttgaattggggaagaacgttgtcatcaattaatggaagaaattttggggattttggactctaggtgataaattgtaaaattggggttccaattttat 11719766  T
Q  280 atatttgaggaagaaagagc 299  Q
    | ||||| ||||||||||||    
T  11719765 agatttggggaagaaagagc 11719746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 232 - 299
Target Start/End: Complemental strand, 25370865 - 25370798
Alignment:
Q  232 attttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  25370865 attttggagtgtagattacatatagtataattagggttccaattttatatatttggggaagaaagagc 25370798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 275 - 373
Target Start/End: Original strand, 9186447 - 9186545
Alignment:
Q  275 tttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgctt 373  Q
    |||||||||||| ||||||||||||||  |||||||| ||||||||| |||||  || |||||||||||||||||| ||| ||| ||||||||||||||    
T  9186447 tttatatatttggggaagaaagagcaagtcattttctgcaaatcaatcaatttagtcattggaaattttggtcactatcggccaaattagtctctgctt 9186545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 165 - 298
Target Start/End: Complemental strand, 17807446 - 17807313
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||| ||||||| ||||||||||||||||||| |||  ||  ||||| || ||||| ||||||| |||||| | | ||| | ||| ||| ||||||||    
T  17807446 attaggttttgaagttttttgaattggggaagaatgttgtcatcaattaatggaagaatttttggggattttgaactctaggtgacaaattataaaatta 17807347  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||| |||||||||||| |||||||||||    
T  17807346 gggttccaaatttatatatttgtggaagaaagag 17807313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 165 - 296
Target Start/End: Original strand, 11790496 - 11790627
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||| ||||||| |||| ||||| |||||||| |||  ||  ||||| || ||||||||||||| |||||||| | ||||| ||| |||||||||| |    
T  11790496 attaggttttgaagtttttagaatttgggaagaaggttgtcatcaattaatggaagaaattttggggattttggactatagataacaaattgtaaaatca 11790595  T
Q  265 gggttccaattttatatatttgaggaagaaag 296  Q
     ||||||| ||||||| |||||||||||||||    
T  11790596 aggttccatttttatagatttgaggaagaaag 11790627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 165 - 299
Target Start/End: Original strand, 31823142 - 31823276
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||||| |||||||||||||| |||||   |||||||||||||  | ||||||||    ||| | ||||||||||| || |||||  |||||    
T  31823142 attagggtttgaagttttttgaattggggcagaactgaaccactaattatttgaggaaattttcatgattatagagtgtagattgcagattgtgtaatta 31823241  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    |||||||||||||||| | ||| ||||||||||||    
T  31823242 gggttccaattttatacaattggggaagaaagagc 31823276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 165 - 299
Target Start/End: Original strand, 32823938 - 32824072
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||||| |||||||||||||||| |||   |||||| ||||||| | ||||||| ||  |||||  |||||||||| || |||||  |||||    
T  32823938 attagggtttgaagttttttgaattggggaaaaactgaaccacttattattggaggaaatttaggcgattttatagtgtagattgcagattgtgtaatta 32824037  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    |||||||||||||| | | ||| ||||||||||||    
T  32824038 gggttccaattttaaacaattggggaagaaagagc 32824072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 25371636 - 25371781
Alignment:
Q  11 tcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaac 110  Q
    ||||||||||||||||| |||||||| ||||| ||||| ||| ||||||| || |||| ||| ||  |||||||||||||||||| ||||||| || ||     
T  25371636 tcacatcaccattaaacttggagcttgaagatgaagctcgacattcataactgttttttcccatatgcccacccctcatcatttcggattcaatttcaat 25371735  T
Q  111 aattttgcttgaagaaattttggtgattttgaatttcggattcaat 156  Q
    | |||||||  || |||||||   ||||||| ||||| ||||||||    
T  25371736 agttttgctgcaataaattttttggattttggatttcagattcaat 25371781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 33748923 - 33748644
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||||||||| ||| ||||||| |||||||| ||||| || ||||||||||||||  | |||| || | |  |||||||| ||||||||||||||    
T  33748923 tcaagcactctcacaacactattaaacttggagcttgaagatgaaacttgactttcataaccgttttttccat-attcccaccccacatcatttcagatt 33748825  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaac 199  Q
    ||| || || | |||||||| |||||||||||   ||| ||  ||||  ||||| |        | ||||||||||||  |||||||||||||| |||||    
T  33748824 caatttcaatagttttgcttcaagaaattttgagtattctggctttcaaattcactacgaaaaaaattagggtttgaatttttttgaattggggcagaac 33748725  T
Q  200 gttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 280  Q
       |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  ||||| |||||||||||||||    
T  33748724 tgaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaattaaggttccaattttata 33748644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 24527303 - 24527184
Alignment:
Q  180 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 279  Q
    ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||||||||||||    
T  24527303 tttttgaattggggaagaactggaccacttattattggaggaaatttaggtgattttagaatgtagattgcagattgtgtaattagggttccaattttat 24527204  T
Q  280 atatttgaggaagaaagagc 299  Q
    | | ||| |||||| |||||    
T  24527203 acaattggggaagatagagc 24527184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 37525267 - 37525149
Alignment:
Q  181 ttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 280  Q
    |||||||||||||||||||   |||||| |||| || | ||||||||||  |||||||||||||||||  | |||||  |||||||||| ||||||||||    
T  37525267 ttttgaattggggaagaactgaaccacttattagtggaggaaattttggtgattttggagtgtagattgaagattgtgcaattagggttacaattttata 37525168  T
Q  281 tatttgaggaagaaagagc 299  Q
     | ||| |||| |||||||    
T  37525167 caattggggaataaagagc 37525149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 41041166 - 41041032
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| | |||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  41041166 attagggttttaagttatttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 41041067  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||| |||||||||||| ||||||||||||    
T  41041066 gggttccaaatttatatatttggggaagaaagagc 41041032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 298
Target Start/End: Complemental strand, 13484964 - 13484831
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  13484964 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 13484865  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
     |||||||| |||||||||||| |||||||||||    
T  13484864 aggttccaaatttatatatttggggaagaaagag 13484831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 37525418 - 37525333
Alignment:
Q  9 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 94  Q
    ||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| ||||||||    
T  37525418 tctcacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgttttttcccatattcccaccccccatcattt 37525333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 199
Target Start/End: Original strand, 8655640 - 8655752
Alignment:
Q  87 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttga 186  Q
    ||||||||||||||||| || || | |||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||| ||| |||||||    
T  8655640 catcatttcagattcaatttcaatagttttgcttcaagaaattttgtggattttggctttcagattcaatacgaaaaaattagggtttcaagttttttga 8655739  T
Q  187 attggggaagaac 199  Q
    |||||||||||||    
T  8655740 attggggaagaac 8655752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 373
Target Start/End: Complemental strand, 10268086 - 10267997
Alignment:
Q  284 ttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgctt 373  Q
    ||||||||||||||||||| |||||||   |||||||| |||||  || ||||||||| |||||||| ||  ||| ||||||||||||||    
T  10268086 ttgaggaagaaagagcaaaacattttcagtaaatcaatcaatttagtcattggaaattatggtcactatcagccaaattagtctctgctt 10267997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 298
Target Start/End: Complemental strand, 41824394 - 41824261
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||  | ||| ||| ||| ||||    
T  41824394 attagggttttaagttttttgaattggggaagaactttgacatcaattcatggaagaaattttggggattttgaactctacgtgacaaattataacatta 41824295  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||| ||| | |||||||||| |||||||||||    
T  41824294 gggtttcaaatatatatatttggggaagaaagag 41824261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 293
Target Start/End: Complemental strand, 31199909 - 31199781
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| || |||||||| ||||||||   |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  31199909 attagggttttaagtttgttgaattgaggaagaactggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 31199810  T
Q  265 gggttccaattttatatatttgaggaaga 293  Q
    |||||||||||||||| | ||| ||||||    
T  31199809 gggttccaattttatacaattggggaaga 31199781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 298
Target Start/End: Original strand, 22273535 - 22273668
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||| ||| ||| || ||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||    
T  22273535 attaggattttaagtttcttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtgacaaattataacatta 22273634  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||| |||||||||||| |||||||||||    
T  22273635 gggttccaaatttatatatttggggaagaaagag 22273668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 297
Target Start/End: Original strand, 29693963 - 29694095
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| ||||| |||||| ||||||| ||  ||  ||||  || ||||||| ||| | |||||| | | ||| | ||| ||| ||| ||||    
T  29693963 attagggttttaagttttttaaattggagaagaactttgtcatcaattcatggaagaaatcttgcggattttgaactctaggtgacaaattataacatta 29694062  T
Q  265 gggttccaattttatatatttgaggaagaaaga 297  Q
    ||||||||| |||||||||||| ||||||||||    
T  29694063 gggttccaaatttatatatttggggaagaaaga 29694095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 32823816 - 32823863
Alignment:
Q  14 catcaccattaaacatggagcttaaagataaagcttgactttcataat 61  Q
    |||||||||||||| || ||||| ||||||||||| ||||||||||||    
T  32823816 catcaccattaaacttgaagcttgaagataaagctcgactttcataat 32823863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 1e-63; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 77 - 297
Target Start/End: Complemental strand, 30501610 - 30501391
Alignment:
Q  77 acccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttga 176  Q
    ||||||||  ||||||||||||||||| ||||||| ||||||||||||||||||| | || | ||| |||||||||||||        || ||||||||     
T  30501610 acccacccaccatcatttcagattcaatttgaacagttttgcttgaagaaattttagggaatctgattttcggattcaataaaaaaaaat-agggtttgg 30501512  T
Q  177 agctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattt 276  Q
     | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  30501511 ggttttttgaattggggaagtacgttaccactaattattgaaagaaattttgggaattttggagtgtagattaaagattgtaaaattagggttccaattt 30501412  T
Q  277 tatatatttgaggaagaaaga 297  Q
    |||||||| ||||||||||||    
T  30501411 tatatattggaggaagaaaga 30501391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 91 - 295
Target Start/End: Original strand, 40962981 - 40963184
Alignment:
Q  91 atttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattg 190  Q
    ||||||||||||| ||||||||||||||||||||||||||||  |||| ||   ||||||||||||        |||||||||||||  |||||||||||    
T  40962981 atttcagattcaatttgaacaattttgcttgaagaaattttgtggattctggtattcggattcaataaaaaaa-attagggtttgaatttttttgaattg 40963079  T
Q  191 gggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgagga 290  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||    
T  40963080 gggaagaacgttaccactaattattgtaagaaattttgggaattttggagtgtagattaaagattgtaaaattagggttccaattttatatatttgggga 40963179  T
Q  291 agaaa 295  Q
    |||||    
T  40963180 agaaa 40963184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 26448332 - 26448037
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||| ||||||||||||||||||||| ||||||||| ||| | |||||||||||| |||| |  || ||||| ||  ||||||| |||||||||||||||    
T  26448332 tcaaacactctcacatcaccattaaagatggagcttgaaggtgaagcttgactttgataactctttgtgcccatatgcccaccc-tcatcatttcagatt 26448234  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| ||||||| |||||||||||||||||||||  ||| ||  |||  ||||||||        |||||||||||||| ||||||||||| | ||| |||    
T  26448233 caatttgaacagttttgcttgaagaaattttgggtattctggtttttagattcaataaaaaaa-attagggtttgaagttttttgaattgagaaaggacg 26448135  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    |||||||||||||||| |||||||||| ||  ||||||||| ||||| | |||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  26448134 ttaccactaattattggaagaaattttaggg-ttttggagtatagataaaatattgtaaaattaaggttccaattttatatatttgaggatgaaagagc 26448037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 1847166 - 1847462
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| ||||||||||||||    
T  1847166 tcaagctctctcacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgttttttcccatattcccaccccccatcatttcagatt 1847265  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    |||  | || | |||||||| |||||||||||  |||||||  ||||  |||||||        ||||||||||| || ||||| ||||||||||||||     
T  1847266 caatatcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgtagttttttaaattggggaagaact 1847365  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 297  Q
      |||| |  |||||| | ||||||||||  |||||| ||||||||||||| |||||  ||||||||||||||||||||| ||||| ||||||||||    
T  1847366 gaaccattttttattggatgaaattttggtgattttgaagtgtagattacaaattgtgtaattagggttccaattttatacatttggggaagaaaga 1847462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 32843017 - 32842721
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||| ||| |||||||||||||||||  || || ||||| ||||| |||||| | || |  | |||||| ||| |||||| | |||||||||  |||    
T  32843017 tcaagcattctgacatcaccattaaacataaagtttgaagatgaagctcgactttgagaacttgtgttgcccatacgcccaccacccatcatttcgcatt 32842918  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    |||  ||||||||||||||||||    |||||| ||||||| ||||| ||||||||        |||||||||||||| |||| ||| |  |||||||||    
T  32842917 caatctgaacaattttgcttgaattttttttggggattttggatttcagattcaatcaaaacaaattagggtttgaagtttttagaagtaaggaagaacg 32842818  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 297  Q
    ||  || |||||| || |||||||||||||||||||||| ||||||||| | |||| ||||||||||||||||||||||| ||||||||||||||||    
T  32842817 ttgtcattaattaatggaagaaattttgggaattttggattgtagattagagattgaaaaattagggttccaattttatagatttgaggaagaaaga 32842721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 65 - 291
Target Start/End: Complemental strand, 49495011 - 49494787
Alignment:
Q  65 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnn 163  Q
    |||||||| |||||||||||| ||||||||||||||||| |  |||| ||||| |||||| |||||| | ||||||   ||||||||||||||           
T  49495011 ttttgcccatacacccacccc-catcatttcagattcaattataacagttttgtttgaaggaattttcgggatttttttatttcggattcaatcaaaaa- 49494914  T
Q  164 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 263  Q
     |||||||||||| | | ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||    
T  49494913 -attagggtttgaggttatttgaattggggaagaacgttaccactaattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaatt 49494815  T
Q  264 agggttccaattttatatatttgaggaa 291  Q
    ||||||||||||||||| ||||| ||||    
T  49494814 agggttccaattttatacatttggggaa 49494787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 41945606 - 41945898
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||||| | |||||| |||||    
T  41945606 tcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccaccccccttcattttagatt 41945705  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || |||| ||||||||||| || |||||  |||||||  |||| ||||||||        |||||| |||| |  ||||||| |||||||||||||    
T  41945706 caatttcaacagttttgcttgaataa-ttttgcagattttggttttcagattcaattaaaaaa-attaggatttgcaattttttgatttggggaagaacg 41945803  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  ||||||||| |||||| ||| |  |||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||    
T  41945804 tgacccttaattattggaagaaaatttagagattttggagtgtagattacacatcgtaaaattagggttccaattttatatatttggggaagaaa 41945898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 48634875 - 48635173
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| || ||||  || ||  |||||||| ||||||||||||||    
T  48634875 tcaagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactgtttttttccatattcccaccccccatcatttcagatt 48634974  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || || | |||||||| |||||||||||  |||||||| ||||  |||||||        |||||||||||||| ||||||||||||||||||||     
T  48634975 caatttcaatagttttgctttaagaaattttgaggattttgactttcaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaact 48635074  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
      |||| | || |||| | || ||||| |  ||||| ||||||| |||  | |||||  ||||||||||||||| ||||| | ||| ||||||||||||    
T  48635075 ggaccatttataattggaggatattttagtgattttagagtgtaaattgtagattgtgtaattagggttccaatgttatacaattggggaagaaagagc 48635173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 10 - 299
Target Start/End: Complemental strand, 24382293 - 24382004
Alignment:
Q  10 ctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaa 109  Q
    ||||||||||||||| || |||||||| ||||| ||| |  ||||||||||  | ||||  || ||  |||||||| ||||||||||||||||| || ||    
T  24382293 ctcacatcaccattatacttggagcttcaagatgaagttaaactttcataacagtttttttccatattcccaccccccatcatttcagattcaatttcaa 24382194  T
Q  110 caattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccacta 209  Q
     | |||||||| || |||| |||  |||||||| |||| ||||||||        |||||||||||||| ||||| ||||||||||||||   | ||||     
T  24382193 tagttttgcttcaaaaaatcttgaggattttgactttcagattcaatgcgaaaaaattagggtttgaagattttttaattggggaagaactggatcactt 24382094  T
Q  210 attattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    |||| |||| ||||||||||  |||||||||||||||||  | |||||  |||||||||| ||| |||||| | ||| ||||||||||||    
T  24382093 attactgaaggaaattttggtgattttggagtgtagattgaagattgtgtaattagggttacaactttatacaattggggaagaaagagc 24382004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 295
Target Start/End: Complemental strand, 37865791 - 37865676
Alignment:
Q  180 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 279  Q
    ||||||| |||||||||||||| |||  ||||||||  |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  37865791 tttttgatttggggaagaacgtgacccttaattattagaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttat 37865692  T
Q  280 atatttgaggaagaaa 295  Q
    ||||||| ||||||||    
T  37865691 atatttggggaagaaa 37865676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 31886088 - 31885827
Alignment:
Q  18 accattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttg 117  Q
    |||||||||| |||| ||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| | |||||| |||||||| || || | | |||    
T  31886088 accattaaacttggatcttgaagatgaagctcgactttcataactgttttttcccatattcccacccc-cgtcattttagattcaatttcaatagtcttg 31885990  T
Q  118 cttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattattga 217  Q
    ||| |||||||||||  |||||||  ||||  |||||||        |||||||||||||| ||||| ||||||||||||||   |||||| |||||||     
T  31885989 cttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgaagttttttcaattggggaagaactgaaccacttattattgg 31885890  T
Q  218 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 280  Q
    | ||||||||||  ||||| ||||||||||| || |||||  |||||| ||||||||||||||    
T  31885889 aggaaattttggtgattttagagtgtagattgcagattgtgtaattagagttccaattttata 31885827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 2975883 - 2975749
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||||| ||||||||||||||||||||   ||| || ||||||| ||||||||||||  ||||||||||||||| |  | |||||  |||||    
T  2975883 attagggtttgaagttttttgaattggggaagaactggaccgcttattattggaagaaattttggtgattttggagtgtagaatgaagattgtgtaatta 2975784  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
      |||||||||||||||||||| ||||||||||||    
T  2975783 aagttccaattttatatatttggggaagaaagagc 2975749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 295
Target Start/End: Original strand, 33051144 - 33051253
Alignment:
Q  186 aattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 285  Q
    ||||||||||||| ||||||||||||||||| ||||  |||||| ||||||||||||| ||||| |||||||| ||||| |||||| |||||||| ||||    
T  33051144 aattggggaagaatgttaccactaattattggaagattttttggaaattttggagtgtggattaaatattgtataattatggttcctattttatacattt 33051243  T
Q  286 gaggaagaaa 295  Q
    | ||||||||    
T  33051244 ggggaagaaa 33051253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 35862129 - 35861831
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||| |||||||||||||||||||||||| |||||| ||||| ||  |  ||||| ||||||| |||||||| |||  ||||| | ||||||||||||||    
T  35862129 tcaaacactctcacatcaccattaaacatagagcttgaagatgaaaatcaactttgataattgtttttgcccatacgtccaccacccatcatttcagatt 35862030  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgat-tttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaac 199  Q
    |||  ||||||      ||||||| |||||||| ||| |||||||||||||||||||        | |||| || |||| ||||| || ||||||||||     
T  35862029 caacctgaacaccaaaacttgaaggaattttggggatctttgaatttcggattcaataaaaaaa-aataggtttagaag-ttttttaaatggggaagaat 35861932  T
Q  200 gttaccactaattattgaaaga-aattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 298  Q
    |||  ||  |||||  | |||| | ||||||| |||||||| | ||||||||| ||| || |||||||||| |||||||||| ||||| |||||||||||    
T  35861931 gttgtcatcaattaaaggaagatatttttggggattttggactatagattacaaattttataattagggtttcaattttatagatttggggaagaaagag 35861832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 37886361 - 37886239
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   |||||||||||||||| |||||    
T  37886361 tcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacccctcatcattttagatt 37886262  T
Q  101 caaattgaacaattttgcttgaa 123  Q
    ||| || |||| |||||||||||    
T  37886261 caatttcaacagttttgcttgaa 37886239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 23775155 - 23775353
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||||||||| ||||||| ||| | |||||  ||||| ||||| ||||||||||| || |||| ||| ||  |||| ||| ||||||||||||||    
T  23775155 tcaagcactctcacaacaccattgaacttagagctcgaagatgaagctcgactttcataactgttttttcccatattcccatcccccatcatttcagatt 23775254  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaac 199  Q
    ||| || || | |||||||| |||||||||||  |||||||  ||||  ||| |||        |||||||||||||| |||||||| |||||||||||    
T  23775255 caatttcaatagttttgcttcaagaaattttgaggattttggctttcaaattaaatacgaaaaaattagggtttgaagttttttgaagtggggaagaac 23775353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 299
Target Start/End: Complemental strand, 18429314 - 18429030
Alignment:
Q  14 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 113  Q
    ||||||| |||||| |||||||| ||||| ||||| |||||||||||    |||| ||||||  | ||||||   |||||||| |||||| || || | |    
T  18429314 catcaccgttaaacttggagcttgaagatgaagctcgactttcataacaattttttcccttattctcaccccgt-tcatttcaaattcaatttcaatagt 18429216  T
Q  114 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 213  Q
    ||||||| |||||||||||  |||||||| |||| ||||||||        ||| |||||| ||| ||||||||||||||||||||   |||||| ||||    
T  18429215 tttgcttcaagaaattttgtagattttgactttcagattcaatacaaaaaaattcgggtttcaagttttttgaattggggaagaactggaccacttatta 18429116  T
Q  214 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    ||  | ||||||| ||  ||||| || | |||||| || |||||  |||||||||| |||||||||| | ||| |||||| |||||    
T  18429115 ttagaggaaatttaggtgattttagaatatagattgcagattgtgtaattagggtttcaattttatacaattggggaagacagagc 18429030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 33112429 - 33112233
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacaccca-cccctcatcatttcagat 99  Q
    ||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| || |||| ||| ||  |||| |||| |||||||||||||    
T  33112429 tcaagcactctcacatcaccattaaacttggagtttgaagatgaagctcgactttcataactgttttttcccatattcccacccccccatcatttcagat 33112330  T
Q  100 tcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 197  Q
     ||| || || | |||||||| ||||||||||   ||||||||  |||  |||||||         ||||||||||||| ||||||||||||||||||    
T  33112329 ccaatttcaatagttttgcttcaagaaattttaaggattttgacattcaaattcaatgcaaaaa-gttagggtttgaagttttttgaattggggaaga 33112233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 299
Target Start/End: Complemental strand, 45256058 - 45255773
Alignment:
Q  14 catcaccattaaacatggagcttaaagataaagcttgactttcataat--tgcttttgcccttacacccacccctcatcatttcagattcaaattgaaca 111  Q
    |||||||||||||| |||||||| || || ||||| |||||||||||   |  |||| ||| ||  | |||||| | ||||||||||||||| || || |    
T  45256058 catcaccattaaacttggagcttgaaaatgaagctcgactttcataacaattttttttcccatattctcacccc-cttcatttcagattcaatttcaata 45255960  T
Q  112 attttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaat 211  Q
     ||||| || |||||||||||  |||||||  |||| ||||||||        |||||||||| ||| ||||||||||||||||||||   |||||| ||    
T  45255959 gttttgtttcaagaaattttgtggattttggctttcagattcaatacgaaaa-attagggtttcaagttttttgaattggggaagaactggaccacttat 45255861  T
Q  212 tattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||| ||||||||| | ||| |||||| |||||    
T  45255860 tattggaggaaatttaggtgattttagaatgtagattgcagattgtgtaattagggttcaaattttatacaattggggaagacagagc 45255773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 280
Target Start/End: Complemental strand, 33851555 - 33851291
Alignment:
Q  14 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 113  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||    |||| |||  |  || ||||| | ||||||||||||||| || || | |    
T  33851555 catcaccattaaacttggagcttgaagatgaagctcgactttcataacaattttttcccagattcc-accccccttcatttcagattcaatttcaatagt 33851457  T
Q  114 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 213  Q
    ||| ||| |||||||||||  |||||||  |||| ||||||||        |||||||||| ||  ||||||||||||||||||||   |||||| ||||    
T  33851456 ttttcttcaagaaattttgtggattttggctttcagattcaatacaaaaaaattagggtttcaaattttttgaattggggaagaactggaccacttatta 33851357  T
Q  214 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 280  Q
    ||| | ||||||| ||  ||||| || |||||||| || |||||  ||||| |||||||||||||||    
T  33851356 ttggaggaaatttaggtgattttagaatgtagattgcagattgtgtaatta-ggttccaattttata 33851291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 45897628 - 45897487
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattg-cttttgcccttacacccacccctcatcatttcagat 99  Q
    ||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||| ||||  |  |||| ||| ||  |||||||| |||||||||| ||    
T  45897628 tcaagcactctcacaacaccattaaacttggagcttgaagatgaagcttgacttttataaccgtttttttcccatattcccaccccacatcatttcatat 45897529  T
Q  100 tcaaattgaacaattttgcttgaagaaattttggtgattttg 141  Q
    |||| || || | |||||||| |||||||||||  |||||||    
T  45897528 tcaatttcaatagttttgcttcaagaaattttgaggattttg 45897487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 2976012 - 2975887
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||| ||||||||||||||||||| |||| ||| ||||| ||||| |||||| |||| || |||| ||| ||  ||||||||| |||||||||||||    
T  2976012 tcaagcaatctcacatcaccattaaacttggaacttgaagatgaagctcgactttgataactg-tttttcccatattcccaccccttatcatttcagatt 2975914  T
Q  101 caaattgaacaattttgcttgaagaaa 127  Q
    ||| || || | |||||||| ||||||    
T  2975913 caatttcaatagttttgcttcaagaaa 2975887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 298
Target Start/End: Original strand, 2378576 - 2378709
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||| ||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  2378576 attagggttttaagttttttgaattagggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataatatta 2378675  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||| |||||||||||| |||||||||||    
T  2378676 gggttccaaatttatatatttggggaagaaagag 2378709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 298
Target Start/End: Original strand, 42282135 - 42282268
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||  | ||| ||| ||| ||||    
T  42282135 attagggttttaagttttttgaattggggaagaactttggcatcaattcatggaagaaattttggggattttgaattctatgtgacaaattataacatta 42282234  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||| |||||||||||  |||||||||||    
T  42282235 gggttccaaatttatatatttagggaagaaagag 42282268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 280
Target Start/End: Original strand, 10380511 - 10380719
Alignment:
Q  73 ttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttaggg 171  Q
    ||||||||||||| ||| |||| |||||||| || || | |||||||| |||||||||||  |||||||  ||||  |||||||        | ||||||    
T  10380511 ttacacccaccccccatgattttagattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatatgaaaaaaattaggg 10380610  T
Q  172 tttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcc 271  Q
    ||||||| ||||||||||||||||||||   |||| | || |||| | || |||||||  |||||  |||||| |||||| |||||  |||||||||| |    
T  10380611 tttgaagatttttgaattggggaagaactggaccatttataattggaggatattttggagattttaaagtgtaaattacagattgtgtaattagggtttc 10380710  T
Q  272 aattttata 280  Q
    ||| |||||    
T  10380711 aatgttata 10380719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 165 - 299
Target Start/End: Original strand, 610850 - 610984
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  |||||||||||||||| ||| || | | | | | ||| ||| ||| ||||    
T  610850 attagggttttaagttttttgaattggggaagaactttggcatcaattcatgaaagaaattttggggattgtgaactcttggtgacaaattataacatta 610949  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
     ||||||||  ||||||||||| ||||||||||||    
T  610950 aggttccaaaattatatatttggggaagaaagagc 610984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 165 - 295
Target Start/End: Original strand, 51686013 - 51686143
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| ||| ||||    
T  51686013 attagggttttaagttttttgaattggggaagaactttggcatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataacatta 51686112  T
Q  265 gggttccaattttatatatttgaggaagaaa 295  Q
    |||||  || |||||||||||| ||||||||    
T  51686113 gggttagaaatttatatatttggggaagaaa 51686143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 298
Target Start/End: Original strand, 17516608 - 17516741
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||| ||||||||| ||  ||  ||||  || ||||||||| | | |||||| | | ||| ||||| ||| ||| ||||    
T  17516608 attagggttttaagttttttgaattagggaagaacattgacatcaattcatggaagaaatttggaggattttgaactctaggttacaaattataacatta 17516707  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    | ||||||| |||||||||||| |||||||||||    
T  17516708 gagttccaaatttatatatttggggaagaaagag 17516741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 298
Target Start/End: Original strand, 21350257 - 21350390
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| ||||||||||||||||| || ||  ||  ||||  || ||||||||| ||| |||||  | | ||| | ||| ||| ||| ||||    
T  21350257 attagggttttaagttttttgaattggggaagtacattgacatcaattcatggaagaaatttgggggattttaaactctaggtgacaaattataacatta 21350356  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||| |||||||||||| |||||||||||    
T  21350357 gggttccaaatttatatatttggggaagaaagag 21350390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 298
Target Start/End: Complemental strand, 30598791 - 30598658
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||    
T  30598791 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtgacaaattataacatta 30598692  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||| |||||||||||| || ||||||||    
T  30598691 gggttccaaatttatatatttggggtagaaagag 30598658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 167 - 299
Target Start/End: Complemental strand, 44268432 - 44268301
Alignment:
Q  167 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 266  Q
    |||||||| ||| ||||||||||||| |||||| ||  || |||||  || ||||||||| ||| |||||| | | | | | ||| ||| ||| ||||||    
T  44268432 tagggttt-aagttttttgaattgggaaagaacattgacattaattcatggaagaaatttgggggattttgaactctgggtgacaaattataacattagg 44268334  T
Q  267 gttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||| |||||||||||| ||||||||||||    
T  44268333 gttccaaatttatatatttggggaagaaagagc 44268301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 23887622 - 23887489
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||||  |||||||||||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  |||||    
T  23887622 attagggtttgaaattttttgaattggggcagaactcaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaatta 23887523  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    || || |||||||||| | ||| ||||||||||||    
T  23887522 ggatttcaattttatacaattg-ggaagaaagagc 23887489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 27897646 - 27897512
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||| ||||| ||| ||||| |||||||||||||| ||  ||  ||||  || |||||||||  || |||||| | | ||| | ||| ||| ||| ||||    
T  27897646 attatggttttaagtttttttaattggggaagaacattgacatcaattcatgtaagaaatttgagggattttgaactctaggtaacaaattataacatta 27897547  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||| |||||||||||| ||||||||||||    
T  27897546 gggttccaaatttatatatttggggaagaaagagc 27897512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 298
Target Start/End: Complemental strand, 23876095 - 23875963
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||| ||||||| |||||||||||||||||||  ||  ||  ||||| || ||||||||||| |||||||| | | || || ||| ||  |||||| |    
T  23876095 attaggttttgaagttttttgaattggggaagaagattgtcatcaattaatggaagaaattttgagaattttgaactcta-atgacaaatgataaaataa 23875997  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||||||| || ||||  |||||||||||    
T  23875996 gggttccaattttgtagattttgggaagaaagag 23875963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 373
Target Start/End: Complemental strand, 30501367 - 30501298
Alignment:
Q  304 cattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgctt 373  Q
    |||||||| ||||||||| |||||  ||||||||||||||||||||| ||  ||| |||||||| |||||    
T  30501367 cattttctgcaaatcaatcaatttcgtccttggaaattttggtcactatcagccaaattagtctttgctt 30501298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 45897467 - 45897342
Alignment:
Q  173 ttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcca 272  Q
    |||||| |||||||||||| | |||||   | |||| ||||||| | ||||||||    ||| | ||||||||||| ||||||||  ||||||||||| |    
T  45897467 ttgaagttttttgaattggagcagaactgaagcacttattattggaggaaattttcatgattatagagtgtagattgcatattgtgtaattagggttcta 45897368  T
Q  273 attttatatatttgaggaagaaagag 298  Q
    |||||||| | ||| |||||||||||    
T  45897367 attttatacaattggggaagaaagag 45897342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 373
Target Start/End: Complemental strand, 7589540 - 7589469
Alignment:
Q  302 agcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgctt 373  Q
    |||||||||| ||||||||| |||||  || |||||||||||| ||| | ||||||| ||||||| ||||||    
T  7589540 agcattttctgcaaatcaatcaattttgtcattggaaattttgatcattatcgaccaaattagtccctgctt 7589469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 23292023 - 23291889
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| |||  ||||||||||||||||||| ||  |  |||||  || ||||||||| ||  |||||| | | ||||| ||  ||| ||| ||||    
T  23292023 attagggttttaagtcttttgaattggggaagaacattgacgttaattcatggaagaaatttgggagattttgaactctagatgacgaattataacatta 23291924  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||| |||||||||||   |||||||||||    
T  23291923 gggttccaaatttatatatttatagaagaaagagc 23291889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13466614 - 13466655
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagat 42  Q
    ||||| ||||||||||||||||||||||| |||||| |||||    
T  13466614 tcaagtactctcacatcaccattaaacatagagcttcaagat 13466655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 40963210 - 40963270
Alignment:
Q  304 cattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattag 364  Q
    |||||||| ||||||||| ||||| ||| |||||||||||||| ||| ||| ||| |||||    
T  40963210 cattttctgcaaatcaatcaatttcatctttggaaattttggttactatcggccaaattag 40963270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 2e-62; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 11022119 - 11021825
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  ||||| || ||   |||||||||||||||| |||||    
T  11022119 tcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgtccatatgaccacccctcatcattttagatt 11022020  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || |||| |||||||||||  |||||||  |||||||| |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||    
T  11022019 caatttcaacagttttgcttgaatgaattttgcagattttgattttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacg 11021920  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  11021919 tgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 11021825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 28247680 - 28247974
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| |||||    
T  28247680 tcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttagatt 28247779  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||    
T  28247780 caatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacg 28247879  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  28247880 tgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 28247974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 165 - 295
Target Start/End: Original strand, 363354 - 363485
Alignment:
Q  165 attagggtttgaagctttt-tgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 263  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||    
T  363354 attagggtttgaagtttttttgaattggagaagaacgttaccactaattattggaagaaattttgaggattttggagtgtagattacatattgtaaaatt 363453  T
Q  264 agggttccaattttatatatttgaggaagaaa 295  Q
    ||||||||||||||||||||||| ||||||||    
T  363454 agggttccaattttatatatttggggaagaaa 363485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 6 - 295
Target Start/End: Complemental strand, 11313402 - 11313127
Alignment:
Q  6 cactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaat 105  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| || | |  |||||||| ||  |||||||| ||||| ||   |||||| |    
T  11313402 cactctcacatcaccattaaacatggagcttgaagataaagcttgactttgatgactctttttgcccatatgcccacccc-catcagtttctattcaatt 11313304  T
Q  106 tgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttacc 205  Q
    |||||| |||||||||||||||||||||  ||| |   |||||||||||||        || |||||||| || ||||| ||||||||||||||||||||    
T  11313303 tgaacagttttgcttgaagaaattttgggaattctagttttcggattcaataaaaaaaaatgagggtttggagtttttttaattggggaagaacgttacc 11313204  T
Q  206 actaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    |||             |||| |||| ||||||||||||| |||| | |||||||||||||||||| ||||||||||||||| ||||||||    
T  11313203 act-------------aattgtggggattttggagtgtacattaaagattgtaaaattagggttctaattttatatatttggggaagaaa 11313127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 3 - 295
Target Start/End: Original strand, 38149543 - 38149836
Alignment:
Q  3 aagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattca 102  Q
    ||||| |||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| |||||||    
T  38149543 aagcattctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttagattca 38149642  T
Q  103 aattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntatt-agggtttgaagctttttgaattggggaagaacgt 201  Q
    | || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        | | ||| |||| |  ||||||| |||||||| |||||    
T  38149643 atttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaaatcaggatttgcaattttttgatttggggaataacgt 38149742  T
Q  202 taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
     |||  ||||||||| |||||| |||||  ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||    
T  38149743 gacccttaattattggaagaaaatttggagattttagagtgtagattacacattgtaaaattagggttccaattttatatatttgggaaagaaa 38149836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 165 - 295
Target Start/End: Original strand, 7744932 - 7745062
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||| | | ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| | ||||||||||||    
T  7744932 attagggtttgaggttatttcaattggggaagaacgttaccactaattattggaagaatttttgggaattttggagtgtggattaaagattgtaaaatta 7745031  T
Q  265 gggttccaattttatatatttgaggaagaaa 295  Q
    ||||| |||||||||| ||||| | ||||||    
T  7745032 gggtttcaattttatacatttgggaaagaaa 7745062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 87 - 297
Target Start/End: Complemental strand, 10715607 - 10715400
Alignment:
Q  87 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttga 186  Q
    |||||||||  |||||| ||||||| ||||||||||||||||||||| |||| |   ||| |||||||||        |||||||||||||| |||||||    
T  10715607 catcatttcgaattcaatttgaacagttttgcttgaagaaattttggggattctagtttttggattcaataaaaaa--attagggtttgaagttttttga 10715510  T
Q  187 attggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 286  Q
    |||||| || ||||||||  |||||||| | ||| |||||||||||||||  || |||||||| | ||||||||||||||||||||||||||||||||||    
T  10715509 attggg-aacaacgttactgctaattatcggaaggaattttgggaattttttagggtagattaaagattgtaaaattagggttccaattttatatatttg 10715411  T
Q  287 aggaagaaaga 297  Q
     |||| |||||    
T  10715410 gggaaaaaaga 10715400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 165 - 298
Target Start/End: Original strand, 17948601 - 17948734
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||| | | ||| |||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| ||||| | ||||||||||||    
T  17948601 attagggtttgaggttatttcaattggggaagaacgttaccaccaattattggaagaatttttgggaattttggagtgtggattaaagattgtaaaatta 17948700  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||| |||||||||| ||||| | |||||||||    
T  17948701 gggtttcaattttatacatttgggaaagaaagag 17948734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 172 - 295
Target Start/End: Complemental strand, 2359516 - 2359394
Alignment:
Q  172 tttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcc 271  Q
    ||||||| |||| ||||||||||||||||||  ||  ||||| ||| ||||||||||||| ||||||| | ||||| ||| ||||||||||||||||| |    
T  2359516 tttgaagtttttagaattggggaagaacgttgtcatcaattaatgatagaaattttggga-ttttggactctagatgacaaattgtaaaattagggtttc 2359418  T
Q  272 aattttatatatttgaggaagaaa 295  Q
    ||||||||| ||||| ||||||||    
T  2359417 aattttatagatttggggaagaaa 2359394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 37418269 - 37418569
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgc-ccttacacccacccctcatcatttcagat 99  Q
    ||||||||||||||| ||||||||||| || ||||  ||||| || || ||||||||||| || ||||   || ||  |||||||| |||||||||||||    
T  37418269 tcaagcactctcacaacaccattaaacttgaagctcgaagatgaaactcgactttcataactgttttttttccatattcccaccccccatcatttcagat 37418368  T
Q  100 tcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaa 198  Q
    |||| || || | |||||||| |||||| ||||  |||||||  ||||  |||||||        | ||||||||||||| |||||||||||| ||||||    
T  37418369 tcaatttcaatagttttgcttcaagaaactttgaggattttggctttcaaattcaatacgaaaaaaattagggtttgaagttttttgaattggcgaagaa 37418468  T
Q  199 cgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 298  Q
    |   |||| | || |||| | || |||||||  ||||| ||||||| ||| || |||||  ||||||||||||||| ||||| | ||| |||||||||||    
T  37418469 ctggaccatttataattggaggatattttggtgattttagagtgtaaattgcagattgtgtaattagggttccaatgttatacaattggggaagaaagag 37418568  T
Q  299 c 299  Q
    |    
T  37418569 c 37418569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 298
Target Start/End: Original strand, 42880329 - 42880610
Alignment:
Q  17 caccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaatttt 116  Q
    ||||||||||| | ||||| |||||| ||||| ||||||||||| || |||| ||| ||  |||| ||| ||| ||||| ||||||| || || | ||||    
T  42880329 caccattaaacttagagctcaaagatgaagctcgactttcataactgttttttcccatattcccaacccccatgatttctgattcaatttcaatagtttt 42880428  T
Q  117 gcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattattg 216  Q
    |||| |||||||||||  |||||||  ||||  ||| |||        |||||||||||||| ||||| ||||||||||||||   |||| | || ||||    
T  42880429 gcttcaagaaattttgaggattttggctttcaaatttaatacgaaaaaattagggtttgaagttttttaaattggggaagaactggaccatttataattg 42880528  T
Q  217 aaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 298  Q
     | || |||||||  ||||| ||||||| ||| || |||||  |||||||||| |||| ||||| | ||| |||||||||||    
T  42880529 gaggatattttggtgattttagagtgtaaattgcagattgtgtaattagggtttcaatgttatacaattggggaagaaagag 42880610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 35869 - 35575
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||||||||| ||||||||||| |||||||| ||||| || ||| ||||||||||  | ||||  || ||  ||||| || ||||||||||||||    
T  35869 tcaagcactctcacaacaccattaaacttggagcttgaagatgaaacttaactttcataaccg-ttttttccatattcccactccacatcatttcagatt 35771  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaattggggaagaac 199  Q
    ||| || || | |||||||| |||||||||||  |||| ||  |||| |||||| |         |||||||||||||| |||||||||||||| |||||    
T  35770 caatttcaatagttttgcttcaagaaattttgaggattctggctttcagattcactacgaaaaaaattagggtttgaagttttttgaattggggcagaac 35671  T
Q  200 gttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
       |||||| ||||||| | ||||||||    ||| | ||||||| ||| || |||||  ||||| ||||| ||||||||| | ||| ||||||||    
T  35670 tgaaccacttattattggaggaaattttcatgattatagagtgtatattgcagattgtgtaattaaggttcgaattttatacaattggggaagaaa 35575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 34400762 - 34400628
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | | | | ||| ||| ||| ||||    
T  34400762 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctgggtgacaaattataacatta 34400663  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||| |||||||||||| ||||||||||||    
T  34400662 gggttccaaatttatatatttggggaagaaagagc 34400628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 42518011 - 42517877
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || |||||| || ||| |||||| | | ||| | ||| ||| ||| ||||    
T  42518011 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaaattgggggattttgaactctaggtgacaaattataacatta 42517912  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||| |||||||||||| ||||||||||||    
T  42517911 gggttccaaatttatatatttggggaagaaagagc 42517877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 293
Target Start/End: Original strand, 15373554 - 15373683
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgt-taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 263  Q
    |||||||||| ||| |||||||||||||||||||| |  |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  ||||    
T  15373554 attagggttttaagttttttgaattggggaagaacttggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatt 15373653  T
Q  264 agggttccaattttatatatttgaggaaga 293  Q
    ||||||||||||||||| | ||| ||||||    
T  15373654 agggttccaattttatacaattggggaaga 15373683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 40150825 - 40150664
Alignment:
Q  38 aagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttg-cttgaagaaattttggtga 136  Q
    ||||| || ||||||||| | ||||| |||||||| |||  ||||| | |||||||| ||||||||  ||||||||||||  ||||||||||||||  ||    
T  40150825 aagatgaaacttgactttgagaattgtttttgcccatacggccaccacccatcattttagattcaatctgaacaattttgatttgaagaaattttgaaga 40150726  T
Q  137 ttttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaa 198  Q
    ||||| |||| |||||||||        | |||||||||||| |||| |||| |||||||||    
T  40150725 ttttggattttggattcaatgaaaacaaaatagggtttgaagtttttagaataggggaagaa 40150664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 299
Target Start/End: Original strand, 40152135 - 40152346
Alignment:
Q  87 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttga 186  Q
    ||||||||  |||||||  |||||||||||| |||||||||||||   ||||||| ||||||||||||||        |||||||||| ||| |||| ||    
T  40152135 catcattttggattcaatctgaacaattttggttgaagaaattttcaggattttggatttcggattcaatcaaatcaaattagggttttaagtttttaga 40152234  T
Q  187 attggggaagaa--cgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 284  Q
    ||||||||||||   |||     |||||| || |||||||| |||  ||||||||  |||||| | | |||| |||||| ||||| |||||||||| |||    
T  40152235 attggggaagaaatggtt---gttaattaatggaagaaattgtggagattttggaccgtagatgagagattgaaaaatttgggtttcaattttatagatt 40152331  T
Q  285 tgaggaagaaagagc 299  Q
    || | ||||||||||    
T  40152332 tgggaaagaaagagc 40152346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 298
Target Start/End: Original strand, 17697776 - 17697903
Alignment:
Q  166 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 265  Q
    ||||||||| ||| ||||||||||||||||||||    |||  | |||| ||| ||||||||||| |||||| | | ||| | ||| ||| ||| |||||    
T  17697776 ttagggttttaagttttttgaattggggaagaac----ccatcatttatggaa-gaaattttggggattttgaactctaggtgacaaattataacattag 17697870  T
Q  266 ggttccaattttatatatttgaggaagaaagag 298  Q
    |||||||| |||||||||||| |||||||||||    
T  17697871 ggttccaaatttatatatttggggaagaaagag 17697903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 19907170 - 19907036
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||| ||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  19907170 attagggttttaagttttttgaattggtgaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 19907071  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||| | |||||||||||| ||||||||||||    
T  19907070 gggttccgaatttatatatttggggaagaaagagc 19907036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 42002990 - 42003108
Alignment:
Q  14 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 113  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||| ||  ||||||||  |||||||||||||  | || || | |    
T  42002990 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcccatattcccaccccctatcatttcagattttatttcaatagt 42003089  T
Q  114 tttgcttgaagaaattttg 132  Q
    ||||||| |||||||||||    
T  42003090 tttgcttcaagaaattttg 42003108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 293
Target Start/End: Original strand, 41708097 - 41708225
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| ||||||||||| ||||||||   |||||| ||||| | | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  41708097 attagggttttaagttttttgaattgaggaagaactggaccacttattatgggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 41708196  T
Q  265 gggttccaattttatatatttgaggaaga 293  Q
    |||||||||||||||| | ||| ||||||    
T  41708197 gggttccaattttatacaattggggaaga 41708225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 279
Target Start/End: Complemental strand, 26581430 - 26581316
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||| ||||||| |||||||||||||||| | ||||  ||  ||||| || |||||||||||||||||||| | | ||| | ||| ||| ||||||||    
T  26581430 attaggttttgaagttttttgaattggggaacagcgttgtcatcaattaatggaagaaattttgggaattttgaactctaggtgacaaattataaaatta 26581331  T
Q  265 gggttccaattttat 279  Q
    || ||| ||| ||||    
T  26581330 ggattctaatcttat 26581316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 16377163 - 16377082
Alignment:
Q  218 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||| | | |||||| | ||||| | ||| ||| ||| ||||||||||||| |||||||||||| ||||||||||||    
T  16377163 aagaaatttagaggattttgaactgtaggtaacaaattataacattagggttccaaatttatatatttggggaagaaagagc 16377082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 366
Target Start/End: Original strand, 363509 - 363585
Alignment:
Q  284 ttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtc 366  Q
    ||||||||||||||||||| |||||||| ||||||||||       |||||| |||||||||||||| ||| ||| |||||||    
T  363509 ttgaggaagaaagagcaaaacattttctgcaaatcaatt------gtccttgaaaattttggtcactatcggccaaattagtc 363585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 4047703 - 4047758
Alignment:
Q  243 tagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 298  Q
    ||||| ||| ||| ||||||||||||| |||||||||| ||||| |||||||||||    
T  4047703 tagatgacaaattataaaattagggtttcaattttatagatttggggaagaaagag 4047758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 10715679 - 10715644
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagctt 36  Q
    ||||||||||||||| ||||||||||||||||||||    
T  10715679 tcaagcactctcacagcaccattaaacatggagctt 10715644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 298
Target Start/End: Original strand, 161813 - 161854
Alignment:
Q  257 taaaattagggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||||||||||| ||| |||||||| |||||||||||    
T  161813 taaaattagggttccaaatttttatatttggggaagaaagag 161854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 298
Target Start/End: Original strand, 2359542 - 2359587
Alignment:
Q  253 attgtaaaattagggttccaattttatatatttgaggaagaaagag 298  Q
    ||||| |||||||||||||||||| ||| ||||| |||||||||||    
T  2359542 attgtcaaattagggttccaatttaatagatttggggaagaaagag 2359587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 237
Target Start/End: Complemental strand, 14387837 - 14387765
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttg 237  Q
    |||||||||  ||| |||||||||||||||||||  ||  ||  |||||||| ||||||||||||| ||||||    
T  14387837 attagggttctaagttttttgaattggggaagaaaattgacatcaattattggaagaaattttggggattttg 14387765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 293
Target Start/End: Original strand, 31474719 - 31474847
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| | | ||||||||||||| |||| | ||  ||||||||  || ||||||| ||| | |||||| | |  || | ||| ||| ||| ||||    
T  31474719 attagggttttaggttttttgaattgggaaagatctttgtcactaattcatggaagaaatcttgaggattttgaactcaaggtcacaaattataatatta 31474818  T
Q  265 gggttccaattttatatatttgaggaaga 293  Q
    ||||||||| |||||||||||| ||||||    
T  31474819 gggttccaaatttatatatttggggaaga 31474847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 2e-62; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 5784372 - 5784666
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  ||||| || ||   |||||||||||||||| |||||    
T  5784372 tcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgtccatatgaccacccctcatcattttagatt 5784471  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || |||| |||||||||||  |||||||  |||||||| |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||    
T  5784472 caatttcaacagttttgcttgaatgaattttgcagattttgattttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacg 5784571  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  5784572 tgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 5784666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 65 - 295
Target Start/End: Original strand, 51123115 - 51123342
Alignment:
Q  65 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnt 164  Q
    |||||||| |||||||||||| ||||||||||||||||| |  |||| ||||  |||||| |||||||| ||||||    ||||||||||||            
T  51123115 ttttgcccatacacccacccc-catcatttcagattcaattacaacagttttatttgaaggaattttggggattttttgattcggattcaatcaaaaa-- 51123211  T
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||| | | ||| |||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| |||||   ||||||||||||    
T  51123212 attagggtttgaggttatttcaattggggaagaacgttacctctaattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaatta 51123311  T
Q  265 gggttccaattttatatatttgaggaagaaa 295  Q
    |||||||||||||||| ||||||||||||||    
T  51123312 gggttccaattttatacatttgaggaagaaa 51123342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 11153130 - 11152837
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||| |||||||||||||||||||||||||  | ||||| ||| |||||||| |||  |  |||||||| ||   ||||||| |||||||| |||||    
T  11153130 tcaagcattctcacatcaccattaaacatggaggatgaagatgaagtttgactttgatagctctttttgcccatatgaccacccc-catcattttagatt 11153032  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || |||| |||||||||||  |||||||  ||||||   |||| ||||||||        ||||||||||| |  ||||||| ||||||||||||     
T  11153031 caatttcaacagttttgcttgaatgaattttgcagattttagttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaaca 11152932  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  ||||||||| |||||| |||||  |||||||||||||||||| | |||||||||||||||||||||||||||| ||||| ||||||||    
T  11152931 tgacccttaattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttatacatttggggaagaaa 11152837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 42558534 - 42558248
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||  | ||| |||| || |||||||| ||| |||||| | ||||||||||||||    
T  42558534 tcaagcactctcacatcaccattaaacatggagcttgaagatgaagctcaaatttgataactgattttgcccatacgcccaccacccatcatttcagatt 42558435  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    |||  ||||||||| |||||||||||||||||  ||||||| |||| |||||||||        |||||||||||||| |||| |||||||| |||||||    
T  42558434 caatctgaacaattatgcttgaagaaattttgcggattttggattttggattcaatcaaaaga-attagggtttgaagtttttagaattgggaaagaacg 42558336  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 298  Q
    |   || |||||| || ||||| ||||||  |          ||||| ||| ||||||||||||||||||||||||| || ||||| |||||||||||    
T  42558335 tcgtcattaattaatggaagaatttttggaga----------tagatgacagattgtaaaattagggttccaattttctagatttggggaagaaagag 42558248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 25172701 - 25172818
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||||||| ||||||||||||  ||||||||| ||| |||| | ||||||||||||    
T  25172701 attagggtttgaatttttttaaattggggaagaacgttaccactaattattggaagaaattttggagattttggagcgtacattaaagattgtaaaatta 25172800  T
Q  265 gggttccaattttatata 282  Q
    |||||| |||||||||||    
T  25172801 gggttctaattttatata 25172818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 14 - 299
Target Start/End: Complemental strand, 45379658 - 45379374
Alignment:
Q  14 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 113  Q
    ||||||| |||||| |||||||||||||| ||||| |||||||||||    |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  45379658 catcaccgttaaacttggagcttaaagatgaagctcgactttcataacaattttttcccatattcccacccc-cttcatttcagattcaatttcaatagt 45379560  T
Q  114 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 213  Q
    ||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||| ||| ||| ||||||||||||||||   |||||| ||||    
T  45379559 tttgcttcaagaaattttgtggattttggctttcagattcaatacaaaaaaattagggtttcaagttttctgaattggggaagaactagaccacttatta 45379460  T
Q  214 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    ||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||| ||||||||| | ||| |||||| |||||    
T  45379459 ttggaggaaatttaggtgattttagaatgtagattgcaaattgtgtaattagggttctaattttatacaattggggaagacagagc 45379374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 293
Target Start/End: Original strand, 44158807 - 44159088
Alignment:
Q  14 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 113  Q
    |||||||||||||| || ||||| ||||| ||||| ||||||||||| |  |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  44158807 catcaccattaaacttgaagcttgaagatgaagctcgactttcataactattttttcccataatcccaccccccttcatttcagattcaatttcaatagt 44158906  T
Q  114 tttgcttgaagaaattttggtgattttgaatttcggattcaat--nnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaat 211  Q
    ||||||| |||||||||||  |||||||  |||| ||||||||          |||||||||| ||| |||||||||||||||||||| | |||||| ||    
T  44158907 tttgcttcaagaaattttgtggattttggctttcagattcaatacgaaaaaaaattagggtttcaagttttttgaattggggaagaacttgaccacttat 44159006  T
Q  212 tattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaaga 293  Q
    ||||| | ||||||| ||  ||||| || |||||||| || |||||  ||| |||||| |||||||||| | ||| ||||||    
T  44159007 tattggaggaaatttaggtgattttagaatgtagattgcagattgtgtaatcagggtttcaattttatacaattggggaaga 44159088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 31803202 - 31803500
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||||||||| ||| ||||||| |||||||| ||||| || ||||||||||||||  | |||| || | |  |||||||| ||||||||||||||    
T  31803202 tcaagcactctcacaacactattaaacttggagcttgaagatgaaacttgactttcataaccgttttttccat-attcccaccccacatcatttcagatt 31803300  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaac 199  Q
    ||| || || | |||||||| |||||||||||  |||| ||  |||| |||||| |        | ||||||||||||| |||||||||||||| |||||    
T  31803301 caatttcaatagttttgcttcaagaaattttgaggattctggctttcagattcactacgaaaaaaattagggtttgaagttttttgaattggggcagaac 31803400  T
Q  200 gttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
       |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  |||||  |||||||||||||| | ||| ||||||||||||    
T  31803401 tgaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaattaacgttccaattttatacaattggggaagaaagagc 31803500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 46637353 - 46637056
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||  | ||||  || ||  |||||||| |||||||| |||||    
T  46637353 tcaagcactctcacaacaccattaaacttggagcttgaagatgaagcttgactttcataaccg-ttttttccatattcccaccccacatcattttagatt 46637255  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaattggggaagaac 199  Q
    ||| || || | |||||||| |||||||||||  |||| ||  ||||  ||||| |         |||||||||||||| |||||||||||||| |||||    
T  46637254 caatttcaatagttttgcttcaagaaattttgaggattctggctttcaaattcactacgaaaaaaattagggtttgaagttttttgaattggggtagaac 46637155  T
Q  200 gttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
       |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  ||||| ||||||||||||||| | ||| ||||||||||||    
T  46637154 tgaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaattaaggttccaattttata-aattggggaagaaagagc 46637056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 299
Target Start/End: Original strand, 42135761 - 42136045
Alignment:
Q  14 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 113  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||    |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  42135761 catcaccattaaacttggagcttgaagatgaagctcgactttcataacaattttttcccatattcccaccccccttcatttcagattcaatttcaatagt 42135860  T
Q  114 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 213  Q
    ||||||| |||||||||||   ||||||| |||| ||||||||        |||| ||||| ||| ||||||||||||||||||||   | |||| ||||    
T  42135861 tttgcttcaagaaattttgtgaattttgactttcagattcaatacgaaaaaatta-ggtttcaagttttttgaattggggaagaactggagcacttatta 42135959  T
Q  214 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    ||| |  |||||| ||  ||||| || |||||||| || |||||  ||||||| ||||||||||||| | ||| |||||| |||||    
T  42135960 ttggagaaaatttaggtgattttagaatgtagattgcagattgtgtaattaggattccaattttatacaattggggaagatagagc 42136045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 299
Target Start/End: Original strand, 6576774 - 6576906
Alignment:
Q  167 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 266  Q
    |||||||||||| ||||||||||||| || |||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || |||||  |||||||    
T  6576774 tagggtttgaagttttttgaattgggaaaaaactggaccacttattattggaggaaatttaggtgattttagagtgtagattgcagattgtttaattagg 6576873  T
Q  267 gttccaattttatatatttgaggaagaaagagc 299  Q
    |||||||||||||| | ||| ||||||||||||    
T  6576874 gttccaattttatacaattggggaagaaagagc 6576906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 299
Target Start/End: Complemental strand, 35478660 - 35478378
Alignment:
Q  14 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 113  Q
    |||||||||||||| || ||||| ||||| ||||| |||||||||||    |||| ||| ||  |||||||| ||||||||  ||||  | || || | |    
T  35478660 catcaccattaaacttgaagcttcaagatgaagctcgactttcataacaattttttcccatattcccaccccccatcattttggattttatttcaatagt 35478561  T
Q  114 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 213  Q
    ||||||| ||||| |||||  |||||||  |||  ||||||||        |||||||||||||| |||||||||||||||| |||   |||||| ||||    
T  35478560 tttgcttcaagaagttttgaggattttggttttaagattcaatacgaaaaaattagggtttgaagttttttgaattggggaaaaactaaaccacttatta 35478461  T
Q  214 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    ||| | ||||||| ||  ||||| ||||||||||   | |||||  |||||||||| |||||||| | | ||||||||||||||||    
T  35478460 ttggaggaaatttaggtgattttagagtgtagat---agattgtgtaattagggtttcaattttaaacaattgaggaagaaagagc 35478378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 50554634 - 50554500
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| ||| ||| | ||| ||| ||| ||||    
T  50554634 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaagtctaggtaacaaattataacatta 50554535  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||| |||||||||||| ||||||||||||    
T  50554534 gggttccaaatttatatatttggggaagaaagagc 50554500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 299
Target Start/End: Complemental strand, 33679680 - 33679549
Alignment:
Q  168 agggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattaggg 267  Q
    ||||||||||| ||||||||||||||||||||   || | | ||||||| | ||||||| ||  ||||| ||||||| ||| || |||||  ||||||||    
T  33679680 agggtttgaagttttttgaattggggaagaactggactagttattattggaggaaatttaggtgattttagagtgtatattgcagattgtgtaattaggg 33679581  T
Q  268 ttccaattttatatatttgaggaagaaagagc 299  Q
    |||||||||| || | ||||||||||||||||    
T  33679580 ttccaattttgtacaattgaggaagaaagagc 33679549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 31237273 - 31237139
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||| || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  31237273 attagggttttaagttttttgaattggggaagaacattgacatcaattaatggaagaaatttgggggattttgaactctaggtaacaaattataacatta 31237174  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    |||||||||  ||||||||||| ||||||||||||    
T  31237173 gggttccaaaattatatatttggggaagaaagagc 31237139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 298
Target Start/End: Complemental strand, 18058254 - 18058121
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||| ||||||| |||| |||||||||||||| |||  ||  ||||| |  ||||| ||||| | |||||| | | ||||| ||| ||||||||||||    
T  18058254 attaggttttgaagtttttagaattggggaagaatgttgtcatcaattaattgaagaagttttgaggattttgaactctagatgacaaattgtaaaatta 18058155  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
     ||||||||||||||| ||||| |||||||||||    
T  18058154 aggttccaattttataaatttggggaagaaagag 18058121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 18183185 - 18183063
Alignment:
Q  9 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattga 108  Q
    ||||||||||||||||||| |||||||| ||||| || || ||||||||||| || |||| ||| |   |||||||| ||||||||||||| ||| || |    
T  18183185 tctcacatcaccattaaacttggagcttgaagatgaaactcgactttcataactgttttttcccatgttcccacccc-catcatttcagatccaatttca 18183087  T
Q  109 acaattttgcttgaagaaattttg 132  Q
    | | |||||||| |||||||||||    
T  18183086 atagttttgcttcaagaaattttg 18183063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 295
Target Start/End: Original strand, 15105986 - 15106116
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | ||||| | ||  ||| ||| ||||    
T  15105986 attagggttttaagttttttgaattggggaagaactttggcatcaattcatgtaagaaattttggggattttgaactgtaggtgacgaattataacatta 15106085  T
Q  265 gggttccaattttatatatttgaggaagaaa 295  Q
    || |||||| |||||||||||| ||||||||    
T  15106086 ggattccaaatttatatatttggggaagaaa 15106116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 298
Target Start/End: Complemental strand, 6817333 - 6817200
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| |||  ||||||||||||||||||| ||  ||  ||||  || |||||||||| ||||||||| | | ||| | ||| ||| ||| ||||    
T  6817333 attagggttttaagtcttttgaattggggaagaacattgacatcaattcatggaagaaattttaggaattttgaactctaggtaacaaattataacatta 6817234  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    |||||| || |||||||||||| |||||||||||    
T  6817233 gggttctaaatttatatatttggggaagaaagag 6817200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 18180900 - 18180818
Alignment:
Q  166 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagatt 248  Q
    ||||||||||||| |||||||||||||||||||    |||||| |||| || | ||||||||||  |||||||||||||||||    
T  18180900 ttagggtttgaagttttttgaattggggaagaatcggaccacttattactggaggaaattttggtgattttggagtgtagatt 18180818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 298
Target Start/End: Complemental strand, 45045365 - 45045232
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||  | | | ||| ||| ||||    
T  45045365 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctatgtgataaattataacatta 45045266  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||| |||||||||||| |||||||||||    
T  45045265 gggttccaaatttatatatttggggaagaaagag 45045232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 280
Target Start/End: Original strand, 27952167 - 27952282
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | |||||||  |  || || || ||||||||| | |||||  |||||    
T  27952167 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttaagtgatattagaatgtagattaaaaattgtgtaatta 27952266  T
Q  265 gggttccaattttata 280  Q
    ||||| ||||||||||    
T  27952267 gggttacaattttata 27952282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 299
Target Start/End: Original strand, 2870712 - 2870845
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  2870712 attagggttttaag-tttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 2870810  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||| || ||||||||| | ||||||||||    
T  2870811 gggttccaaattgatatatttgggaaagaaagagc 2870845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 3012309 - 3012175
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| |   |||||| | | ||| | ||| |||  || ||||    
T  3012309 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttggtagattttgaactataggtgacaaattagaacatta 3012210  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||| |||||||||||| ||||||||||||    
T  3012209 gggttccaaatttatatatttggggaagaaagagc 3012175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 33679814 - 33679696
Alignment:
Q  14 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 113  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||  ||  |||||||| ||||||||| ||||  | || || | |    
T  33679814 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcctatattcccaccccccatcatttcggattttatttcaatagt 33679715  T
Q  114 tttgcttgaagaaattttg 132  Q
    ||||||| |||||||||||    
T  33679714 tttgcttcaagaaattttg 33679696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 373
Target Start/End: Original strand, 25172876 - 25172945
Alignment:
Q  304 cattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgctt 373  Q
    |||||||| ||||||||| || ||  ||||||||||||||||||||| |||  || ||||||||||||||    
T  25172876 cattttctgcaaatcaatcaaattcgtccttggaaattttggtcactatcggtcaaattagtctctgctt 25172945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 33599580 - 33599542
Alignment:
Q  257 taaaattagggttccaattttatatatttgaggaagaaa 295  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  33599580 taaaattagggttccaaatttatatatttgtggaagaaa 33599542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 4e-60; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 39922512 - 39922806
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  | ||||||||| ||   ||||| | |||||||| |||||    
T  39922512 tcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctccttttgcccatatgaccacctcccatcattttagatt 39922611  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||    
T  39922612 caatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttggggaagaacg 39922711  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  39922712 tgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 39922806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 39084657 - 39084951
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| |||||    
T  39084657 tcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttagatt 39084756  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||    
T  39084757 caatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttggggaagaacg 39084856  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  39084857 tgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagagttccaattttatatatttggggaagaaa 39084951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 39190324 - 39190618
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| |||||    
T  39190324 tcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttagatt 39190423  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || || | |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||    
T  39190424 caatttcaatagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacg 39190523  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  39190524 tgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 39190618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 42879870 - 42879576
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||| ||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| |||||    
T  42879870 tcaatcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttagatt 42879771  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||    
T  42879770 caatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacg 42879671  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  42879670 tgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 42879576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 43778973 - 43778681
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  | ||||||||| ||   ||||| | |||||||| |||||    
T  43778973 tcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctccttttgcccatatgaccacctcccatcattttagatt 43778874  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||    
T  43778873 caatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaa-attagggtttgcaattttttga-ttggggaagaacg 43778776  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||    
T  43778775 tgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggcgaagaaa 43778681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 5485557 - 5485851
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||  | ||||  |||||||||||| |||  |  |||||||| ||   || || | |||||||| |||||    
T  5485557 tcaagcactctcacatcaccattaaacatggaggatgaagacgaagcttgactttgatagctctttttgcccatatgaccgcctcccatcattttagatt 5485656  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||    
T  5485657 caatttcaacatttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttggggaagaacg 5485756  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  ||||||||| |||||| |||||  |||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||    
T  5485757 tgacccttaattattggaagaaaatttggagattttggagtgtagattacacatggtaaaattagggttccaattttatatatttggggaagaaa 5485851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 44993394 - 44993100
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||| |||||||||||||||||||||||  | ||||| || ||||||||| |||  |  |||||||| ||   ||||| | |||||||| |||||    
T  44993394 tcaagcactttcacatcaccattaaacatggaggatgaagatgaaacttgactttgatagctctttttgcccatatgaccacctcccatcattttagatt 44993295  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||    
T  44993294 caatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacg 44993195  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  ||||||||| |||||| ||||   |||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  44993194 tgacccttaattattggaagaaaatttgaagattttggagtgtagattacacattgtaaaattaggattccaattttatatatttggggaagaaa 44993100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 165 - 294
Target Start/End: Complemental strand, 13438275 - 13438146
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||    
T  13438275 attagggtttgaagttttttgaattggggaagaaagttaccactaattattggaagaaattttgggaattttggagtgtacattaaagattgtaaaatta 13438176  T
Q  265 gggttccaattttatatatttgaggaagaa 294  Q
    ||||| | |||||||||||||| |||||||    
T  13438175 gggtttctattttatatatttggggaagaa 13438146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 99 - 284
Target Start/End: Original strand, 25994708 - 25994897
Alignment:
Q  99 ttcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta----ttagggtttgaagctttttgaattgggga 194  Q
    ||||| ||||||| ||||||||||||||||||||| |||| ||  |||||||||||||        |    | |||||||| || ||||||||||| |||    
T  25994708 ttcaatttgaacagttttgcttgaagaaattttggggattctggttttcggattcaataaaaaaaaaaaaatcagggtttggagttttttgaattgagga 25994807  T
Q  195 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 284  Q
    |||| ||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  25994808 agaatgttaccactaattattggaagaaattttgaggattttggagtgtagattacagattgtaaatttagagttccaattttatatatt 25994897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 165 - 295
Target Start/End: Complemental strand, 230869 - 230740
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||||  |||||||||| || ||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||| ||||||||||||    
T  230869 attagggtttgaaattttttgaattagg-aagaacgttaccactaattattggaagaaattttggggactttggagtgtagattacagattgtaaaatta 230771  T
Q  265 gggttccaattttatatatttgaggaagaaa 295  Q
    || | |||||||||||||||||  |||||||    
T  230770 ggatgccaattttatatatttggagaagaaa 230740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 4 - 295
Target Start/End: Original strand, 32653139 - 32653430
Alignment:
Q  4 agcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaa 103  Q
    ||||||||||||||||||||||||||| ||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||||| | |||||| ||||||||    
T  32653139 agcactctcacatcaccattaaacatgaaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacccc-cttcattttagattcaa 32653237  T
Q  104 attgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgtt 202  Q
     || |||| |||||||||||  |||||||  |||||||  ||||  |||||||        | |||||||||| |  ||||||| |||||||||||| |     
T  32653238 tttcaacagttttgcttgaatgaattttgcagattttggttttcatattcaattaaaaaaaaattagggtttgtaattttttgatttggggaagaacatg 32653337  T
Q  203 accactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||| ||| |||||||||||||||  ||||||||    
T  32653338 acccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagagtttcaattttatatattttgggaagaaa 32653430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 4519971 - 4520270
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||| | ||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||| ||| ||   ||||||| |||||||||| |||    
T  4519971 tcaagcactttgacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgttttttcccatatttccacccc-catcatttcatatt 4520069  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat--nnnnnnntattagggtttgaagctttttgaattggggaagaa 198  Q
    ||  || || | |||||||| |||||||||||  |||||||  |||| ||||||||          |||||||||| ||| |||||||||||| ||||||    
T  4520070 cattttcaatagttttgcttcaagaaattttgaggattttggctttcagattcaatacaaaaaaaaattagggtttcaagttttttgaattggagaagaa 4520169  T
Q  199 cgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 298  Q
    |   |||||| |||||   | ||||||||||  ||||| ||||||||||| || ||| |  ||||||||||||||||||||||| |||  ||||||||||    
T  4520170 ctgaaccacttattatcagaggaaattttggtgattttagagtgtagattgcaaattttgtaattagggttccaattttatataattggcgaagaaagag 4520269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 280
Target Start/End: Complemental strand, 44557183 - 44556917
Alignment:
Q  14 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 113  Q
    |||||||||||||| |||||||  ||||| ||||| |||||||||||  | |||| ||| ||  |||||||||||||||||  ||||  | || || | |    
T  44557183 catcaccattaaacttggagctagaagatgaagctcgactttcataacagttttttcccatattcccacccctcatcattttggattttatttcaatagt 44557084  T
Q  114 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 213  Q
    ||||||| ||||| |||||  |||||||  |||  ||||||||        |||||||||||||| ||||||||||||||||||||   |||||| ||||    
T  44557083 tttgcttcaagaatttttgaggattttggttttaagattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaactggaccacttatta 44556984  T
Q  214 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 280  Q
    ||| | ||||||| ||  ||||| ||||||||||| || |||||  ||||||  |||||||||||||    
T  44556983 ttggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattagaattccaattttata 44556917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 39294553 - 39294625
Alignment:
Q  166 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttgg 238  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  39294553 ttagggtttgaagttttttgaattggggaagaacgttaccactaattattggaagaaattttggggattttgg 39294625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 299
Target Start/End: Original strand, 27626246 - 27626530
Alignment:
Q  15 atcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaatt 114  Q
    ||||||||||||| |||||||| ||||| ||||| |||||||||||  | ||||  || ||  |||||||| ||||||||  ||||  | || || | ||    
T  27626246 atcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttgccatattcccaccccccatcattttggattttatttcaatagtt 27626345  T
Q  115 ttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattat 214  Q
    |||||| |||||||||||  |||||||  |||  ||||||||        |||||||||||||| |||||||||||||||||||    |||||| |||||    
T  27626346 ttgcttcaagaaattttgaggattttggttttaagattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaattggaccacttattat 27626445  T
Q  215 tgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    || | |||||||     ||||| |||||||||||  | |||||  ||||||||||||||||||||| | ||| ||||||||||||    
T  27626446 tggaggaaatttaaatgattttagagtgtagattgtagattgtgtaattagggttccaattttatacaattggggaagaaagagc 27626530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 298
Target Start/End: Complemental strand, 51041314 - 51041027
Alignment:
Q  9 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattga 108  Q
    ||||||||||||||||||| |||||||| ||||| || || ||||||||||| || |||| ||| ||  |||||||  |||||||||| |||||| || |    
T  51041314 tctcacatcaccattaaacttggagcttgaagatgaaactcgactttcataactgttttttcccatattcccaccc--catcatttcatattcaatttca 51041217  T
Q  109 acaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccact 208  Q
    | | |||||||| ||    |||||  |||||||| |||| ||||||||         ||||||||||||| ||| ||||| ||||||||||   ||||||    
T  51041216 atagttttgcttcaaatttttttgaggattttgactttcagattcaatgcgaaaaagttagggtttgaagatttatgaataggggaagaaccgaaccact 51041117  T
Q  209 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 298  Q
     ||||  | | |||||  |||  |||||||| |||||||| || |||||  |||||||||| |||||||||| | ||| |||||||||||    
T  51041116 tattaccggaggaaatcatggtgattttggaatgtagattgcagattgtgtaattagggttacaattttatacaattggggaagaaagag 51041027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 297
Target Start/End: Complemental strand, 28100977 - 28100865
Alignment:
Q  185 gaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 284  Q
    ||||||||||||||||||  ||  ||||| || |||||||||||||||||||||| | ||||||| | |||||| |||||| ||| |||||||||| |||    
T  28100977 gaattggggaagaacgttgtcatcaattaatggaagaaattttgggaattttggactctagattataaattgtacaattagagtttcaattttatagatt 28100878  T
Q  285 tgaggaagaaaga 297  Q
    || ||||||||||    
T  28100877 tggggaagaaaga 28100865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 165 - 297
Target Start/End: Original strand, 13449984 - 13450107
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||||| ||||||||||||||||||| ||||  | ||||||||| ||||         |||||||||||||| |||| | ||||||||||||    
T  13449984 attagggtttgaagttttttgaattggggaagaatgttaaaaataattattggaaga---------aattttggagtgtacattaaagattgtaaaatta 13450074  T
Q  265 gggttccaattttatatatttgaggaagaaaga 297  Q
    ||||| |||||||||| |||||  |||||||||    
T  13450075 gggtttcaattttatacatttggtgaagaaaga 13450107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 272 - 375
Target Start/End: Original strand, 39294645 - 39294748
Alignment:
Q  272 aattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattagtctctgc 371  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||   | |||||||||||||||| | ||  ||| ||||||| ||||    
T  39294645 aattttatatatttggggaagaaagagaaaagcattttctgcaaatcaatcaatttagcctttggaaattttggtcattatcatccaaattagtccctgc 39294744  T
Q  372 ttct 375  Q
    ||||    
T  39294745 ttct 39294748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 2691818 - 2691684
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||  ||  ||  ||||| || ||||||||||||  |||||| | | ||| | ||| ||| ||| ||||    
T  2691818 attagggttttaagttttttgaattggggaagaattttgtcatcaattaatggaagaaattttggagattttgaactctaggtgacaaattataacatta 2691719  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||| |||||||||||| ||||||||||||    
T  2691718 gggttccaaatttatatatttggggaagaaagagc 2691684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 298
Target Start/End: Complemental strand, 20820423 - 20820290
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||| ||| ||| |||||||||||| ||||||| ||  ||  ||||| || ||||||||||||| |||||  | | ||| | ||| ||| ||||||||    
T  20820423 attaggtttttaagttttttgaattggagaagaactttgtcatcaattagtggaagaaattttggggattttaaactttaggtgacaaattataaaatta 20820324  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||| |||||||||||||| |||||||||    
T  20820323 gggttccaaatttatatatttgagaaagaaagag 20820290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 299
Target Start/End: Original strand, 35997284 - 35997568
Alignment:
Q  21 attaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgctt 120  Q
    ||||||| || ||||| ||||| ||||| ||||||| |||  | |||| ||| ||  |||||||| ||||||||||||||||| || || | ||||||||    
T  35997284 attaaacttgcagcttgaagatgaagctcgactttcttaacagttttttcccatattcccaccccccatcatttcagattcaatttcaatagttttgctt 35997383  T
Q  121 gaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaa------gaacgttaccactaattat 214  Q
     |||||||||||  |||||||  |||| ||||||||         ||||||||| ||| ||||| ||||||||||      ||||   |||||| |||||    
T  35997384 caagaaattttgtggattttggctttcagattcaatacgaaaaatttagggtttcaagttttttaaattggggaagaactggaactggaccacttattat 35997483  T
Q  215 tgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    || | ||||||| ||  || || || |||||||| || |||||  ||||||||||||||||||||| | ||| |||||| |||||    
T  35997484 tggaggaaatttaggttatattagaatgtagattgcagattgtgtaattagggttccaattttatacaattggggaagacagagc 35997568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 293
Target Start/End: Original strand, 47942413 - 47942541
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  47942413 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 47942512  T
Q  265 gggttccaattttatatatttgaggaaga 293  Q
    |||||||||||||||| | ||| ||||||    
T  47942513 gggttccaattttatacaattggggaaga 47942541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 298
Target Start/End: Original strand, 54387537 - 54387670
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||| | |||||| | | ||| | ||| ||||||| ||||    
T  54387537 attagggttttaagttttttgaattggggaagaactttggcatcaattcatggaagaaattttgaggattttgaactctaggtgacaaattgtaacatta 54387636  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||| |||||||||||  || ||||||||    
T  54387637 gggttccaaatttatatatttagggcagaaagag 54387670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 280
Target Start/End: Complemental strand, 44793358 - 44793243
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | |||||||  |  || || || ||||||||| | |||||  |||||    
T  44793358 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttatgtgatattagaatgtagattatagattgtgtaatta 44793259  T
Q  265 gggttccaattttata 280  Q
    ||||||||||||||||    
T  44793258 gggttccaattttata 44793243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 11254512 - 11254378
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    ||||||||||  || |||||||||||||||||||| ||  ||  ||||| || ||||| ||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  11254512 attagggttttgagttttttgaattggggaagaacattgacatcaattaatggaagaattttgggggattttgaactctaggtgacaaattataacatta 11254413  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||| ||| |||||||||||| ||||||||||||    
T  11254412 gggtttcaaatttatatatttggggaagaaagagc 11254378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 10544693 - 10544778
Alignment:
Q  208 taattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaaga 293  Q
    |||||| || ||||||||||||| |||||||| ||||||  |   |||| ||||||||||||||||||||||| ||||| ||||||    
T  10544693 taattaatggaagaaattttggggattttggactgtagacgagggattgaaaaattagggttccaattttatagatttggggaaga 10544778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 26397635 - 26397715
Alignment:
Q  218 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||||||| |||||| | | ||||| ||| ||| |||| ||||||||| ||||||||| ||||||||||||||||||    
T  26397635 aagaaattttggggattttgaactctagatgacaaattataaa-ttagggttctaattttatagatttgaggaagaaagagc 26397715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 298
Target Start/End: Original strand, 49524394 - 49524527
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | |  || | ||| ||| ||| ||||    
T  49524394 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactccaggtgacaaattataacatta 49524493  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||| |||||||| ||| |||||||||||    
T  49524494 gggttccaaatttatatacttggggaagaaagag 49524527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 10544515 - 10544605
Alignment:
Q  13 acatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaa 103  Q
    ||||||||||||||||| |||||| ||||| ||| | |||||| | || || |||||||| ||| |||||| | |||||||||| ||||||    
T  10544515 acatcaccattaaacatagagcttgaagatgaagttcgactttgagaactgtttttgcccatacgcccaccacccatcatttcatattcaa 10544605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 35402202 - 35402069
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| ||||| |||||||||||||| ||  ||  ||||  || ||||||||| ||| |||| | | | ||| | ||| ||| ||| ||||    
T  35402202 attagggttttaagtttttttaattggggaagaacattgacatcaattcatggaagaaatttgggggattt-gaactctaggtgacaaattataacatta 35402104  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||| |||||||||||| ||||||||||||    
T  35402103 gggttccaaatttatatatttggggaagaaagagc 35402069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 350
Target Start/End: Complemental strand, 230728 - 230650
Alignment:
Q  272 aattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcact 350  Q
    ||||||||||| ||| |||||||| ||||||||||||||  |||||||   || ||  |||||||||||| ||||||||    
T  230728 aattttatataattggggaagaaaaagcaaagcattttcagcaaatcagccaaattagtccttggaaattatggtcact 230650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 298
Target Start/End: Original strand, 42982211 - 42982248
Alignment:
Q  261 attagggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  42982211 attagggttccaaatttatatatttggggaagaaagag 42982248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 20494182 - 20494146
Alignment:
Q  262 ttagggttccaattttatatatttgaggaagaaagag 298  Q
    |||||||||||| |||||||||||| |||||||||||    
T  20494182 ttagggttccaaatttatatatttggggaagaaagag 20494146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 6e-53; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 17951146 - 17950853
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  ||||||||  |   ||||| | |||||||| |||||    
T  17951146 tcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccaaatgaccacctcccatcattttagatt 17951047  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||    
T  17951046 caatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaa-attagggtttgtaattttttgatttggggaagaacg 17950948  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  17950947 tgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 17950853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 5 - 295
Target Start/End: Complemental strand, 35174964 - 35174674
Alignment:
Q  5 gcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaa 104  Q
    ||||||||| |||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||    |||| | ||| |||| ||||||||     
T  35174964 gcactctcatatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgatcacctcccattattttagattcaat 35174865  T
Q  105 ttgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttac 204  Q
    || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||| ||    
T  35174864 ttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacgtgac 35174765  T
Q  205 cactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    |  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  35174764 ccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 35174674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 17936042 - 17936339
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgctttt-gcccttacacccacccctcatcatttcagat 99  Q
    ||||||| ||| |||||||||||||||||  |  || ||||| ||||| |||||| | || || |||| |||| |||  ||||| | ||||||||| |||    
T  17936042 tcaagcattctgacatcaccattaaacataaattttgaagatgaagctcgactttgagaactgttttttgcccatacgtccaccacccatcatttcggat 17936141  T
Q  100 tcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaac 199  Q
    ||||  ||||||||||||||||||    |||||| ||||||| ||||| ||||||||        |||||||||||||| |||| ||| | || || |||    
T  17936142 tcaatctgaacaattttgcttgaattttttttggggattttggatttcagattcaatcaaaacaaattagggtttgaagtttttagaagtaggcaataac 17936241  T
Q  200 gttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 297  Q
    |||  || |||||| || |||||||||||||||||||||| ||||||||| | |||| |||||||||||| |||||||||| ||||||||||||||||    
T  17936242 gttgtcattaattaatggaagaaattttgggaattttggattgtagattagagattgaaaaattagggtttcaattttatagatttgaggaagaaaga 17936339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 34344830 - 34345123
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||  | ||| | |||||||||||| |||  |  |||||||| ||   |||||||  ||||||| |||||    
T  34344830 tcaagcactctcacatcaccattaaacatggaggatgaagttgaagcttgactttgatagctctttttgcccatatgaccacccca-atcattttagatt 34344928  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || |||| |||||||| ||  |||||||  |||||||  ||||  || ||||        ||||||||||| |  ||||| | | |||||||||||    
T  34344929 caatttcaacacttttgcttaaatgaattttgcagattttggttttcatatccaattaaaaaaaattagggtttgcaatttttttattcggggaagaacg 34345028  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  ||||||||| |||||| ||||   |||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||    
T  34345029 tgacccttaattattggaagaaaatttgaagattttggagtgtagattacacattgtaaagttagggttccaattttatatattttaggaagaaa 34345123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 167 - 295
Target Start/End: Complemental strand, 4289838 - 4289710
Alignment:
Q  167 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 266  Q
    ||||||||| |  ||||||| |||||||||||||| |||  ||||||||| |||||| |||||  |||||||||| ||||||||| ||||||||||||||    
T  4289838 tagggtttgcaattttttgatttggggaagaacgtgacccttaattattggaagaaaatttggagattttggagtatagattacacattgtaaaattagg 4289739  T
Q  267 gttccaattttatatatttgaggaagaaa 295  Q
     ||||||||||||||||||| ||||||||    
T  4289738 attccaattttatatatttggggaagaaa 4289710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 173 - 346
Target Start/End: Original strand, 31210129 - 31210313
Alignment:
Q  173 ttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcca 272  Q
    |||||| ||||||||||||||||||| ||||||||||||||||| |  | ||||| |  |||||||||||||||||||| |||||||||||||| || ||    
T  31210129 ttgaagttttttgaattggggaagaaagttaccactaattattggataatatttttgagattttggagtgtagattacagattgtaaaattaggttttca 31210228  T
Q  273 atttt--------atata---tttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggt 346  Q
    || ||        | |||    |||||| ||||||||||||||||||||||||||||||| |||||  |||||| ||||||||||    
T  31210229 atatttggggaagaaataaccgttgagggagaaagagcaaagcattttctacaaatcaatcaatttagtccttgaaaattttggt 31210313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 33277234 - 33277101
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| |||  |  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| |||||| |    
T  33277234 attagggttttaagttttttgaattggggaagaactttaatatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataaaatca 33277135  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||| ||||||||||||| |||||||||||    
T  33277134 gggttccaaatttatatatttga-gaagaaagagc 33277101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 298
Target Start/End: Complemental strand, 7371586 - 7371453
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  7371586 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 7371487  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||| |||||||||||| |||||||||||    
T  7371486 gggttccaaatttatatatttggggaagaaagag 7371453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 30640027 - 30639903
Alignment:
Q  173 ttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcca 272  Q
    |||||| ||||||||||  ||||||||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || |||||  ||||| |||||||    
T  30640027 ttgaagttttttgaattatggaagaactggaccacttattattggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattatggttcca 30639928  T
Q  273 attttatatatttgaggaagaaaga 297  Q
    |||||||| | || |||||||||||    
T  30639927 attttatacaattaaggaagaaaga 30639903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 11356803 - 11356922
Alignment:
Q  180 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 279  Q
    |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||||||||||| |||||    
T  11356803 tttttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtaacaaattataacattagggttccaaatttat 11356902  T
Q  280 atatttgaggaagaaagagc 299  Q
    ||||||| ||||||||||||    
T  11356903 atatttggggaagaaagagc 11356922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 33267419 - 33267342
Alignment:
Q  218 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    ||||||||||||| |||||| | | ||| | ||| ||| ||| ||||||||||||| ||| |||||||| ||||||||    
T  33267419 aagaaattttggggattttgaactctaggtgacaaattataacattagggttccaaatttgtatatttggggaagaaa 33267342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 14338061 - 14337985
Alignment:
Q  209 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 285  Q
    ||||| || ||||||||||||| |||||| | | ||  | ||| ||| ||||||||||||||||| |||||||||||    
T  14338061 aattaatggaagaaattttggggattttgaactctatgtgacaaattataaaattagggttccaaatttatatattt 14337985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 9e-49; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 165 - 299
Target Start/End: Original strand, 1344478 - 1344612
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||||||| | ||||||||||||    
T  1344478 attagggtttgaagttttttgaattggggaagaacgttaccaccaattattggaagaaattttggagattttggagtgtagattaaagattgtaaaatta 1344577  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    |||||||||||||||||||||  ||||||||||||    
T  1344578 gggttccaattttatatatttagggaagaaagagc 1344612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 42619869 - 42619581
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    |||||||||||||||||||||||||||||||||  | ||||| ||||||||||||  ||   |||    ||| ||   ||||||| |||||||| |||||    
T  42619869 tcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttggta---gctc---cccatatgaccaccccccatcattttagatt 42619776  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| |||||||||||||    
T  42619775 caatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaacg 42619676  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
    | |||  ||||||||| |||||| |||||  |||||||||||||||||| | |||||||||||||||||||||||||||| ||||| ||||||||    
T  42619675 tgacccttaattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttatacatttggggaagaaa 42619581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 170 - 373
Target Start/End: Original strand, 24497749 - 24497970
Alignment:
Q  170 ggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggtt 269  Q
    ||||||||| |||||||||||||||||||||||| || | ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  24497749 ggtttgaaggtttttgaattggggaagaacgttatcattgattattggaagaaattttgggaattttggagtgtagattacttattgtaaaattagagtt 24497848  T
Q  270 ccaattttatatat------------------ttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactg 351  Q
     |||||||||||||                  ||| ||||||||||||||| |||||| | ||||||||| |||||| |||||| |||||||| |||||     
T  24497849 tcaattttatatatttagggaagaaatagccattggggaagaaagagcaaaacattttatgcaaatcaatcaatttggtccttgtaaattttgatcacta 24497948  T
Q  352 tcgaccacattagtctctgctt 373  Q
    ||| ||| ||||||||||||||    
T  24497949 tcggccaaattagtctctgctt 24497970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 38177221 - 38176923
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| |  |||| ||| ||   ||||||| ||||||||||||||    
T  38177221 tcaagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactattttttcccatatttccaccccccatcatttcagatt 38177122  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || || | |||||||| |||||||||||  |||||||  ||||  |||||||        |||||||||||||| ||||||||||||||||||||     
T  38177121 caatttcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaact 38177022  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
      |||| | || |||| | || ||||||| |||||| ||||||| |||    |||||  ||||||||||||||| ||||| | ||| ||||||||||||    
T  38177021 ggaccatttataattggaggatattttggtaattttagagtgtaaattgttgattgtgtaattagggttccaatgttatacaattggggaagaaagagc 38176923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 38204445 - 38204147
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| |  |||| ||| ||   ||||||| ||||||||||||||    
T  38204445 tcaagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactattttttcccatatttccaccccccatcatttcagatt 38204346  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || || | |||||||| |||||||||||  |||||||  ||||  |||||||        |||||||||||||| ||||||||||||||||||||     
T  38204345 caatttcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaact 38204246  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
      |||| | || |||| | || ||||||| |||||| ||||||| |||    |||||  ||||||||||||||| ||||| | ||| ||||||||||||    
T  38204245 ggaccatttataattggaggatattttggtaattttagagtgtaaattgttgattgtgtaattagggttccaatgttatacaattggggaagaaagagc 38204147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 18727152 - 18726853
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||||||||| ||||||||||| |||||||| ||||| |||||| ||||||||||  | |||| ||  ||  |||||||| ||||||||||||||    
T  18727152 tcaagcactctcacaacaccattaaacttggagcttgaagatgaagctttactttcataaccgttttttcctatattcccaccccacatcatttcagatt 18727053  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaattggggaagaac 199  Q
    ||| || || | | |||||| |||||||||||  |||||||  |||  |||||| |         |||||||||||||| |||||||||||||| |||||    
T  18727052 caatttcaatagtcttgcttcaagaaattttgaggattttggctttgagattcactacgaaaaaaattagggtttgaagttttttgaattggggcagaac 18726953  T
Q  200 gttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
       |||||| ||||||| |  |||||||    ||| | |||||||||||||| |||||  ||||||||||||||||||||| | ||| ||||||||||||    
T  18726952 tgaaccacttattattggagaaaattttcatgattatagagtgtagattacagattgtgtaattagggttccaattttatacaattggggaagaaagagc 18726853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 35291632 - 35291343
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||| ||||||||||||||||| |||||||| ||||| || |||||||||||||| || |||| ||| ||  |||||||| |||||||||||||     
T  35291632 tcaagcactatcacatcaccattaaacttggagcttgaagatgaaacttgactttcataactgttttttcccatattcccacccc-catcatttcagatc 35291534  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || || | |||||||| |||||||||||  ||||||||  |||  |||||||         ||||||||||||| ||| ||||||||||||||||     
T  35291533 caatttcaatagttttgcttcaagaaattttgaggattttgacattcaaattcaatgcaaaaa-gttagggtttgaagttttgtgaattggggaagaacc 35291435  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 295  Q
      |||||| |||| || | ||||||||||  ||||||||||||||||| |   ||||  ||| |||||| |||||||||| | ||| ||||||||    
T  35291434 ggaccacttattactggaggaaattttggtgattttggagtgtagattgc---ttgtgtaatcagggtttcaattttatacaattggggaagaaa 35291343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 40330016 - 40330296
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||||||||||||||||||||| ||||  || ||||| ||||| ||||||||||| |  |||| ||| ||   ||||||| |||||||||||| |    
T  40330016 tcaagcactctcacatcaccattaaacttggaaattgaagatgaagctcgactttcataactattttttcccatatttccaccccccatcatttcagaat 40330115  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaac 199  Q
    ||| || || | |||||||| ||||||||||   |||||||  ||||  |||||||        | ||||||||| ||| || ||||||||||||||| |    
T  40330116 caatttcaatagttttgcttcaagaaattttcaagattttggctttcatattcaatacggaaaaaattagggtttcaagtttgttgaattggggaagagc 40330215  T
Q  200 gttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 280  Q
       |||||| ||||||| | |||||||| |  ||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  40330216 tggaccacttattattggaggaaatttttgtgattttggagtgtagattgcatattgtgtaattagggttccaattttata 40330296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 165 - 297
Target Start/End: Complemental strand, 1343614 - 1343482
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    ||||||||||| || ||||| |||||||||| |||||||||||||| ||||| ||||||||||||  |||||||||||||| ||| | ||| ||||||||    
T  1343614 attagggtttggagttttttaaattggggaaaaacgttaccactaactattggaagaaattttggagattttggagtgtagtttaaagattataaaatta 1343515  T
Q  265 gggttccaattttatatatttgaggaagaaaga 297  Q
    ||||  |||||||||||||||  ||||||||||    
T  1343514 gggtgtcaattttatatatttagggaagaaaga 1343482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 65 - 295
Target Start/End: Original strand, 27350095 - 27350322
Alignment:
Q  65 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnn 163  Q
    |||||||| |||||||||||| |||||||||  |||||| |  |||| ||||| ||||||||||||||| ||||||   |||| |||||||||           
T  27350095 ttttgcccatacacccacccc-catcatttcttattcaattacaacagttttgtttgaagaaattttggggatttttttattttggattcaataaaaaa- 27350192  T
Q  164 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 263  Q
     | |||||||||| | | ||| ||||||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||||  |||| | ||| |||||||    
T  27350193 -aatagggtttgaggttatttcaattggggatgaacgttac-actaattattgaaagaatttttgggaattttggcgtgtgaattaaagattataaaatt 27350290  T
Q  264 agggttccaattttatatatttgaggaagaaa 295  Q
    ||||||||||||||||| ||||| | ||||||    
T  27350291 agggttccaattttatacatttgggaaagaaa 27350322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 32089423 - 32089725
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt--cag- 97  Q
    ||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||  | |||| ||| ||  |||||||| ||||||||   ||     
T  32089423 tcaagcactctcacaacaccattaaacttggagcttgaagatgaagcttgactttcataaccgttttttcccatattcccaccccacatcattttgaagt 32089522  T
Q  98 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaattggggaag 196  Q
    |||||| || || | |||||||| |||||||||||  |||||||  |||| |||||| |         |||||||||||||| |||||||||||||| ||    
T  32089523 attcaatttcaatagttttgcttcaagaaattttgaggattttggctttcagattcactacgaaaaaaattagggtttgaagttttttgaattggggcag 32089622  T
Q  197 aacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 296  Q
    |||   ||| || ||||||| |  |||||||    ||| | ||||||||||| || |||||  ||||||||||||||||||||| | ||| |||||||||    
T  32089623 aactgaacctcttattattggagtaaattttcatgattatagagtgtagattgcagattgtgtaattagggttccaattttatacaattggggaagaaag 32089722  T
Q  297 agc 299  Q
    |||    
T  32089723 agc 32089725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 32836464 - 32836186
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| || |||| | | ||  |||||||| ||||||||||||||    
T  32836464 tcaagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactgttttttcacatattcccacccc-catcatttcagatt 32836366  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 200  Q
    ||| || || | |||||||| || |  |||||  |||||||  |||   |||||||        |||||||||||||| ||||||||||||||||||||     
T  32836365 caatttcaatagttttgcttcaaaattttttgaggattttggcttttaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaact 32836266  T
Q  201 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 280  Q
    | |||| | ||  ||| | || |||||||  |||||  |||||| ||| || |||||  ||||||||||||||| |||||    
T  32836265 tgaccatttatatttggaggatattttggtgattttatagtgtaaattgcagattgtgtaattagggttccaatgttata 32836186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 65 - 299
Target Start/End: Original strand, 6116465 - 6116700
Alignment:
Q  65 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnt 164  Q
    |||||||  |||||||| | | ||||||||| ||||||| |||||||||||||  |||||||||||||| ||||||| |||||  |||||||            
T  6116465 ttttgcctatacacccatcacccatcatttcggattcaatttgaacaattttgaatgaagaaattttggggattttggatttcatattcaatcaaaacaa 6116564  T
Q  165 a--ttagggtttgaagctttttgaattggggaagaac--gttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaa 260  Q
    |  ||||||||||||| |||| ||||  ||||||||   |||     |||||| || ||||||||||||| ||||| || ||||||||| | |||| |||    
T  6116565 aaattagggtttgaagtttttagaatcagggaagaaatggttgt---taattaatggaagaaattttggggatttttgactgtagattagagattgaaaa 6116661  T
Q  261 attagggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||| |||||||||| ||||| ||||||||||||    
T  6116662 attagggtttcaattttatagatttggggaagaaagagc 6116700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 43317317 - 43317176
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| || ||||  || ||  |||||||| |||||||||||||     
T  43317317 tcaagcactctcacatcaccattaaacttggagtttgaagatgaagctcgactttcataactgtttttttccatattcccaccccccatcatttcagatc 43317218  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttga 142  Q
    ||| || |  | |||||||| |||||||||||  ||||||||    
T  43317217 caatttcactagttttgcttcaagaaattttgaggattttga 43317176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 18623899 - 18623765
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||| | ||  ||| ||| ||||    
T  18623899 attagggttttaagttttttgaattggggaagaactttggcatcaattcatgtaagaaattttggggattttgaactctaggtgacgaattataacatta 18623800  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||| |||||||||||| ||||||||||||    
T  18623799 gggttccaaatttatatatttggggaagaaagagc 18623765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 18341605 - 18341745
Alignment:
Q  1 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 100  Q
    ||||||| ||| |||||||| |||||||| ||| || | ||| |||||  | ||| | || || |||||||| |||  ||||| | ||||||||||||||    
T  18341605 tcaagcattcttacatcaccgttaaacatagagtttgaggatgaagctcaagtttgagaactgtttttgcccatacgaccaccacccatcatttcagatt 18341704  T
Q  101 caaattgaacaattttgcttgaagaaattttggtgattttg 141  Q
    |||  |||||||||||| ||||||||||||||| |||||||    
T  18341705 caatctgaacaattttgattgaagaaattttggggattttg 18341745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 32134690 - 32134556
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  32134690 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactataggtgacaaattataacatta 32134591  T
Q  265 gggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||| ||||||||||||  |||||||||||    
T  32134590 gggttccaaatttatatatttgtagaagaaagagc 32134556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 280
Target Start/End: Original strand, 35400226 - 35400489
Alignment:
Q  17 caccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaatttt 116  Q
    ||||||||||| ||||| || ||||| || ||||||||||| ||    |||| ||| ||  |||||||| ||||||||||||||||| || || | ||||    
T  35400226 caccattaaacttggagtttgaagatgaaacttgactttcaaaacctttttttcccatattcccaccccccatcatttcagattcaatttcaatagtttt 35400325  T
Q  117 gcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattattg 216  Q
    |||| |||||||||||  |||||||  |||| || ||| |        | |  ||||||||| ||||| |||||||  ||||    |||||| |||||||    
T  35400326 gcttcaagaaattttgaggattttggctttcagactcactacgaaaaaaattaggtttgaagttttttaaattgggacagaattggaccacttattattg 35400425  T
Q  217 aaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 280  Q
     | ||||||||   |||| | ||||||||||| ||||||||  |||||||||||||||||||||    
T  35400426 gaggaaattttcataattatagagtgtagattgcatattgtgtaattagggttccaattttata 35400489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 165 - 298
Target Start/End: Original strand, 34328466 - 34328600
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttggga-attttggagtgtagattacatattgtaaaatt 263  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || |||||||||||||  |||||| | | |||   ||| ||| ||| |||    
T  34328466 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaattttgggggattttgaactctaggcgacaaattataatatt 34328565  T
Q  264 agggttccaattttatatatttgaggaagaaagag 298  Q
    |||||||||| |||||||||||| |||||||||||    
T  34328566 agggttccaaatttatatatttggggaagaaagag 34328600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 298
Target Start/End: Original strand, 12738337 - 12738470
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  12738337 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 12738436  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||| ||||||| |||  |||||||||||    
T  12738437 gggttccaaatttatatgtttagggaagaaagag 12738470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 298
Target Start/End: Original strand, 12801160 - 12801293
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  12801160 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 12801259  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||| ||||||| |||  |||||||||||    
T  12801260 gggttccaaatttatatgtttagggaagaaagag 12801293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 298
Target Start/End: Original strand, 27077123 - 27077256
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||| ||||||| |||||||||||||||||||||||  ||  ||||| || |||||||||| |  |||||| | | |   | ||| ||| ||||||||    
T  27077123 attaggttttgaagttttttgaattggggaagaacgttgtcatcaattaatggaagaaattttagagattttgaactctcagtgacaaattataaaatta 27077222  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    |||||||||| ||||  ||||| |||||||||||    
T  27077223 gggttccaatgttatggatttggggaagaaagag 27077256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 298
Target Start/End: Original strand, 33257426 - 33257559
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||||||| |||||||||||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||| ||| || |||||  ||| |    
T  33257426 attagggtttgaagttttttgaattggggcagaactgaaccacttattattggaggaaattttcatgattatagagtgtatattgcagattgtgtaatca 33257525  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||| |||||||||| | ||| |||||||||||    
T  33257526 gggttacaattttatacaattggggaagaaagag 33257559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 286
Target Start/End: Complemental strand, 41494285 - 41494167
Alignment:
Q  168 agggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattaggg 267  Q
    ||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| ||| ||| |||    
T  41494285 agggttttaagttttttgaattggggaagaactttgtcatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataacattcggg 41494186  T
Q  268 ttccaattttatatatttg 286  Q
    |||||| ||||||||||||    
T  41494185 ttccaaatttatatatttg 41494167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 30464344 - 30464263
Alignment:
Q  218 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||||||||||| |||||||||||| ||||||||||||    
T  30464344 aagaaatttgggggattttgaactctaggtaacaaattataacattagggttccaaatttatatatttggggaagaaagagc 30464263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 298
Target Start/End: Complemental strand, 28035852 - 28035772
Alignment:
Q  218 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 298  Q
    |||||||||||| ||||||  | |||| |||| | |||| ||| ||| |||| ||||||||||||| ||||||||||||||    
T  28035852 aagaaattttggaaattttaaactgtaaattagagattgaaaagttaaggtttcaattttatatatctgaggaagaaagag 28035772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 299
Target Start/End: Original strand, 28821770 - 28821860
Alignment:
Q  209 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||| || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||||||| ||| |||||||||||| ||||||||||||    
T  28821770 aattaatggaagaaatttgggggattttgaactctaggtgacaaattataacattagggtttcaaatttatatatttggggaagaaagagc 28821860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 295
Target Start/End: Complemental strand, 29620529 - 29620495
Alignment:
Q  261 attagggttccaattttatatatttgaggaagaaa 295  Q
    ||||||||||||| |||||||||||||||||||||    
T  29620529 attagggttccaaatttatatatttgaggaagaaa 29620495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 297
Target Start/End: Original strand, 8541036 - 8541072
Alignment:
Q  261 attagggttccaattttatatatttgaggaagaaaga 297  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  8541036 attagggttccaaatttatatatttggggaagaaaga 8541072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 298
Target Start/End: Original strand, 19998149 - 19998229
Alignment:
Q  218 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 298  Q
    ||||||||||| |||||||  | | ||| | ||| ||| ||||||||||||| | |||||||| ||||| |||||||||||    
T  19998149 aagaaattttgagaattttaaactctaggtgacaaattataaaattagggtttccattttatagatttggggaagaaagag 19998229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 65 - 293
Target Start/End: Original strand, 37856 - 38082
Alignment:
Q  65 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnn 163  Q
    |||||||| ||||||||||| |||||||||||||||||| |  |||| ||||| |||||| |||||||| ||||||   ||||||||||||||           
T  37856 ttttgcccatacacccaccc-tcatcatttcagattcaattacaacagttttgtttgaaggaattttggggattttttgatttcggattcaatcaaaaa- 37953  T
Q  164 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 263  Q
     |||||||||||| | | ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||    
T  37954 -attagggtttgaggttatttcaattggggaagaacgttaccactaattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaatt 38052  T
Q  264 agggttccaattttatatatttgaggaaga 293  Q
    ||||||||||||||||| ||||| ||||||    
T  38053 agggttccaattttatacatttggggaaga 38082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 78 - 299
Target Start/End: Complemental strand, 57890 - 57669
Alignment:
Q  78 cccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaa 177  Q
    |||||||||||| ||||| ||||||| || || | |||||||  ||||||||||   ||||||| ||||| ||||||||        || ||||||||||    
T  57890 cccacccctcatgatttcggattcaatttcaatagttttgctgaaagaaattttttggattttggatttcagattcaataaaaaaaaat-agggtttgaa 57792  T
Q  178 gctttttgaattgg-ggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattt 276  Q
    | |||||||||| | ||||||| ||||||||| ||||||  ||||||||||||  |||||||||||||||||||| || ||| ||| |||||| ||||||    
T  57791 gttttttgaattagaggaagaatgttaccacttattattcgaagaaattttggttattttggagtgtagattacagatagtataatcagggtttcaattt 57692  T
Q  277 tatatatttgaggaagaaagagc 299  Q
    |||||||||| ||||||||||||    
T  57691 tatatatttggggaagaaagagc 57669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 299
Target Start/End: Original strand, 2643 - 2710
Alignment:
Q  232 attttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||| ||||||||||||    
T  2643 attttggagtgtagattacatatagtataattagagttccagttttatatatttggggaagaaagagc 2710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 232 - 299
Target Start/End: Complemental strand, 2423 - 2356
Alignment:
Q  232 attttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 299  Q
    |||||||||||||||||||  || ||| ||| ||||||||||||||||||||||| ||||||||||||    
T  2423 attttggagtgtagattactgatagtataatgagggttccaattttatatatttggggaagaaagagc 2356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 299
Target Start/End: Complemental strand, 4574 - 4446
Alignment:
Q  170 ggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggtt 269  Q
    ||||||||| |||| | |||| |||||||||||  ||  ||||| || ||||| ||||||  |||||  | | ||||| ||| ||||||||||||| |||    
T  4574 ggtttgaagtttttagcattgaggaagaacgttgtcatcaattaatggaagaa-ttttggagattttaaactctagatgacaaattgtaaaattagagtt 4476  T
Q  270 ccaattttatatatttgaggaagaaagagc 299  Q
    ||||||||||| ||||||| ||||||||||    
T  4475 ccaattttatagatttgagaaagaaagagc 4446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 298
Target Start/End: Original strand, 9533 - 9666
Alignment:
Q  165 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 264  Q
    |||||||||| ||| |||||||||||||||| ||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  9533 attagggttttaagttttttgaattggggaaaaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 9632  T
Q  265 gggttccaattttatatatttgaggaagaaagag 298  Q
    ||||| ||| |||||||||||| |||||||||||    
T  9633 gggtttcaaatttatatatttggggaagaaagag 9666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 1164 - 1283
Alignment:
Q  180 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 279  Q
    |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||||||||||| |||||    
T  1164 tttttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtaacaaattataacattagggttccaaatttat 1263  T
Q  280 atatttgaggaagaaagagc 299  Q
    ||||||| ||||||||||||    
T  1264 atatttggggaagaaagagc 1283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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