View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9405_low_4 (Length: 243)

Name: NF9405_low_4
Description: NF9405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9405_low_4
NF9405_low_4
[»] chr4 (42 HSPs)
chr4 (4-226)||(631326-631547)
chr4 (4-222)||(17048686-17048903)
chr4 (77-222)||(20160448-20160593)
chr4 (77-222)||(20157772-20157917)
chr4 (77-219)||(20163229-20163371)
chr4 (83-222)||(14954769-14954908)
chr4 (82-222)||(10712244-10712384)
chr4 (82-222)||(10926014-10926154)
chr4 (77-222)||(15224426-15224571)
chr4 (83-222)||(5757507-5757647)
chr4 (83-222)||(9555919-9556059)
chr4 (83-222)||(12487074-12487214)
chr4 (83-222)||(14758004-14758144)
chr4 (83-222)||(33741769-33741909)
chr4 (83-222)||(4561902-4562042)
chr4 (82-218)||(37018300-37018436)
chr4 (142-218)||(3484804-3484880)
chr4 (142-222)||(17809723-17809803)
chr4 (83-169)||(25689292-25689378)
chr4 (132-218)||(14548469-14548555)
chr4 (82-218)||(35812632-35812776)
chr4 (164-218)||(15042323-15042377)
chr4 (164-218)||(15112047-15112101)
chr4 (164-218)||(25090443-25090497)
chr4 (142-218)||(13592535-13592611)
chr4 (142-217)||(16997294-16997369)
chr4 (83-162)||(27533400-27533479)
chr4 (173-222)||(25689349-25689398)
chr4 (173-222)||(27533457-27533506)
chr4 (164-202)||(3484793-3484831)
chr4 (165-218)||(42874589-42874642)
chr4 (83-130)||(17807517-17807564)
chr4 (164-202)||(13592584-13592622)
chr4 (14-48)||(33185518-33185552)
chr4 (14-47)||(13592740-13592773)
chr4 (14-47)||(15042429-15042462)
chr4 (14-47)||(15111962-15111995)
chr4 (14-47)||(16997197-16997230)
chr4 (14-47)||(25090357-25090390)
chr4 (12-52)||(10712193-10712233)
chr4 (12-52)||(10925963-10926003)
chr4 (162-218)||(14650409-14650465)
[»] scaffold0124 (1 HSPs)
scaffold0124 (4-226)||(25169-25389)
[»] chr3 (62 HSPs)
chr3 (4-222)||(16795823-16796040)
chr3 (68-226)||(12852883-12853041)
chr3 (77-222)||(14665037-14665182)
chr3 (77-222)||(14668193-14668338)
chr3 (77-221)||(15464486-15464630)
chr3 (77-222)||(12339088-12339232)
chr3 (77-221)||(16750919-16751063)
chr3 (83-222)||(15964337-15964476)
chr3 (83-222)||(15968261-15968400)
chr3 (83-222)||(15972185-15972324)
chr3 (83-222)||(37440214-37440353)
chr3 (77-222)||(8489764-8489906)
chr3 (77-222)||(19774954-19775099)
chr3 (77-222)||(4589490-4589635)
chr3 (83-222)||(11069460-11069600)
chr3 (83-222)||(14498717-14498857)
chr3 (83-222)||(22321056-22321196)
chr3 (83-222)||(22336111-22336251)
chr3 (83-222)||(27410221-27410361)
chr3 (83-222)||(28949114-28949254)
chr3 (83-222)||(55022257-55022397)
chr3 (77-222)||(17317705-17317850)
chr3 (83-222)||(7109088-7109228)
chr3 (83-222)||(7113023-7113163)
chr3 (83-222)||(15616766-15616906)
chr3 (83-213)||(4107985-4108116)
chr3 (83-213)||(4111837-4111968)
chr3 (83-222)||(11166106-11166246)
chr3 (142-222)||(5222774-5222854)
chr3 (77-222)||(14670449-14670602)
chr3 (77-222)||(14681971-14682124)
chr3 (147-218)||(46821903-46821974)
chr3 (142-218)||(18700869-18700945)
chr3 (142-225)||(2842655-2842737)
chr3 (82-218)||(10543014-10543158)
chr3 (164-214)||(13543678-13543728)
chr3 (171-222)||(12120169-12120220)
chr3 (171-222)||(38962287-38962338)
chr3 (164-218)||(35353360-35353414)
chr3 (142-218)||(14441077-14441153)
chr3 (166-218)||(42353679-42353731)
chr3 (72-202)||(14440973-14441104)
chr3 (164-218)||(10562478-10562532)
chr3 (165-218)||(5214723-5214776)
chr3 (141-202)||(13520978-13521039)
chr3 (83-162)||(30065372-30065452)
chr3 (142-218)||(43890179-43890255)
chr3 (175-222)||(30065432-30065479)
chr3 (164-209)||(19884816-19884861)
chr3 (173-218)||(44269408-44269453)
chr3 (83-119)||(5220536-5220572)
chr3 (150-202)||(15565319-15565371)
chr3 (14-48)||(5214582-5214616)
chr3 (14-52)||(14670382-14670420)
chr3 (164-202)||(15565300-15565338)
chr3 (164-202)||(18700918-18700956)
chr3 (14-47)||(2842801-2842834)
chr3 (14-47)||(5214614-5214647)
chr3 (14-47)||(31414905-31414938)
chr3 (14-47)||(35353274-35353307)
chr3 (14-47)||(44269340-44269373)
chr3 (125-181)||(14067289-14067345)
[»] scaffold0165 (2 HSPs)
scaffold0165 (4-221)||(3043-3259)
scaffold0165 (4-221)||(7106-7322)
[»] scaffold0484 (1 HSPs)
scaffold0484 (4-218)||(172-385)
[»] chr7 (49 HSPs)
chr7 (16-226)||(18301625-18301834)
chr7 (83-225)||(20487186-20487328)
chr7 (77-222)||(12705236-12705381)
chr7 (77-222)||(13919072-13919217)
chr7 (74-222)||(25927818-25927968)
chr7 (83-222)||(45170608-45170747)
chr7 (77-222)||(2530731-2530876)
chr7 (77-222)||(2832774-2832919)
chr7 (77-222)||(15083555-15083700)
chr7 (77-222)||(1859401-1859546)
chr7 (77-222)||(39721625-39721770)
chr7 (77-222)||(18425044-18425189)
chr7 (77-222)||(26291756-26291901)
chr7 (83-222)||(71344-71484)
chr7 (83-222)||(75453-75593)
chr7 (83-222)||(16907788-16907928)
chr7 (83-222)||(18282755-18282895)
chr7 (83-222)||(32498-32638)
chr7 (83-222)||(12718057-12718197)
chr7 (83-222)||(12722968-12723108)
chr7 (83-222)||(16113630-16113770)
chr7 (83-222)||(16116783-16116923)
chr7 (83-222)||(18278792-18278932)
chr7 (142-218)||(24274799-24274875)
chr7 (77-162)||(7519677-7519762)
chr7 (82-218)||(16585087-16585231)
chr7 (143-218)||(16579257-16579332)
chr7 (143-218)||(16586330-16586405)
chr7 (157-222)||(15605869-15605934)
chr7 (142-214)||(14257924-14257996)
chr7 (158-218)||(16461500-16461560)
chr7 (142-218)||(20585203-20585279)
chr7 (83-138)||(12714353-12714408)
chr7 (82-202)||(14257823-14257951)
chr7 (171-218)||(15082324-15082370)
chr7 (164-218)||(14183819-14183873)
chr7 (164-202)||(14933118-14933156)
chr7 (164-202)||(15356553-15356591)
chr7 (164-202)||(15360667-15360705)
chr7 (164-202)||(24274788-24274826)
chr7 (164-218)||(32300804-32300858)
chr7 (165-218)||(12466473-12466526)
chr7 (82-139)||(32300747-32300804)
chr7 (164-202)||(20585192-20585230)
chr7 (14-47)||(14933278-14933311)
chr7 (14-47)||(15356713-15356746)
chr7 (14-47)||(15360827-15360860)
chr7 (14-47)||(15360871-15360904)
chr7 (14-47)||(38479733-38479766)
[»] chr1 (29 HSPs)
chr1 (14-222)||(48602804-48603010)
chr1 (14-222)||(22131457-22131663)
chr1 (77-222)||(41781875-41782020)
chr1 (83-222)||(1925731-1925870)
chr1 (83-222)||(20924745-20924884)
chr1 (78-221)||(41388597-41388740)
chr1 (85-218)||(33796911-33797044)
chr1 (77-222)||(39244496-39244641)
chr1 (77-222)||(39248051-39248196)
chr1 (82-222)||(16376035-16376176)
chr1 (77-222)||(20229584-20229729)
chr1 (77-222)||(21406740-21406885)
chr1 (83-222)||(1010112-1010252)
chr1 (83-222)||(52638930-52639070)
chr1 (71-214)||(23967332-23967483)
chr1 (142-218)||(42911818-42911894)
chr1 (142-218)||(14238695-14238775)
chr1 (164-218)||(19675542-19675596)
chr1 (142-212)||(48519948-48520018)
chr1 (164-218)||(20241618-20241672)
chr1 (164-202)||(14238748-14238786)
chr1 (164-202)||(42911807-42911845)
chr1 (14-52)||(48519682-48519720)
chr1 (12-48)||(4597165-4597201)
chr1 (142-202)||(48519915-48519975)
chr1 (14-48)||(48519786-48519820)
chr1 (14-47)||(42911721-42911754)
chr1 (14-47)||(48519818-48519851)
chr1 (14-47)||(51274834-51274867)
[»] scaffold0142 (1 HSPs)
scaffold0142 (14-226)||(8163-8373)
[»] chr8 (26 HSPs)
chr8 (14-222)||(44385223-44385430)
chr8 (77-222)||(21828616-21828761)
chr8 (82-222)||(18863247-18863387)
chr8 (83-222)||(30940679-30940818)
chr8 (77-222)||(23913655-23913800)
chr8 (77-222)||(21386717-21386862)
chr8 (77-222)||(14398425-14398568)
chr8 (77-222)||(21410309-21410454)
chr8 (77-222)||(21804801-21804946)
chr8 (83-222)||(21973158-21973298)
chr8 (83-222)||(21977249-21977389)
chr8 (83-222)||(22111320-22111460)
chr8 (83-222)||(43251200-43251340)
chr8 (96-218)||(16413760-16413882)
chr8 (142-218)||(32121453-32121529)
chr8 (142-218)||(42819107-42819183)
chr8 (72-202)||(5760107-5760237)
chr8 (142-212)||(18833091-18833161)
chr8 (164-202)||(32121442-32121480)
chr8 (162-218)||(19929978-19930034)
chr8 (14-61)||(18832974-18833020)
chr8 (164-202)||(37515200-37515238)
chr8 (164-202)||(42819156-42819194)
chr8 (14-47)||(42819247-42819280)
chr8 (12-52)||(21828790-21828830)
chr8 (12-52)||(30940924-30940964)
[»] scaffold0575 (1 HSPs)
scaffold0575 (77-222)||(6468-6613)
[»] scaffold0031 (1 HSPs)
scaffold0031 (77-222)||(36688-36833)
[»] chr6 (50 HSPs)
chr6 (77-222)||(22074563-22074708)
chr6 (77-222)||(23414289-23414434)
chr6 (92-222)||(2076871-2077001)
chr6 (77-222)||(1643894-1644039)
chr6 (77-222)||(31478561-31478706)
chr6 (83-222)||(11566251-11566391)
chr6 (83-222)||(12619419-12619559)
chr6 (83-222)||(22862335-22862475)
chr6 (83-222)||(23394457-23394597)
chr6 (83-222)||(14471603-14471742)
chr6 (77-222)||(16623738-16623883)
chr6 (83-222)||(8243222-8243362)
chr6 (83-222)||(23989309-23989449)
chr6 (83-222)||(19869978-19870119)
chr6 (83-202)||(16759626-16759746)
chr6 (82-222)||(27556065-27556192)
chr6 (83-169)||(22948506-22948592)
chr6 (83-169)||(22952462-22952548)
chr6 (83-169)||(23870950-23871036)
chr6 (83-169)||(23874906-23874992)
chr6 (164-218)||(34963069-34963123)
chr6 (89-218)||(22805370-22805507)
chr6 (82-218)||(19774060-19774204)
chr6 (151-218)||(23538235-23538302)
chr6 (164-218)||(23992126-23992180)
chr6 (165-218)||(17105354-17105407)
chr6 (142-214)||(17742851-17742923)
chr6 (142-218)||(19656621-19656697)
chr6 (159-218)||(27126606-27126665)
chr6 (143-218)||(15705936-15706011)
chr6 (83-162)||(18918013-18918092)
chr6 (168-222)||(27416503-27416557)
chr6 (150-207)||(16759727-16759784)
chr6 (173-222)||(22948563-22948612)
chr6 (173-222)||(22952519-22952568)
chr6 (173-222)||(23871007-23871056)
chr6 (173-222)||(23874963-23875012)
chr6 (164-218)||(7825435-7825489)
chr6 (77-202)||(19656762-19656888)
chr6 (143-202)||(15705985-15706044)
chr6 (179-222)||(18917986-18918029)
chr6 (13-66)||(17742613-17742665)
chr6 (132-185)||(19656746-19656799)
chr6 (142-202)||(17742818-17742878)
chr6 (9-48)||(17105121-17105160)
chr6 (164-202)||(17742807-17742845)
chr6 (164-202)||(19656695-19656733)
chr6 (165-202)||(23538216-23538253)
chr6 (142-202)||(20182380-20182440)
chr6 (142-202)||(22153551-22153611)
[»] chr5 (19 HSPs)
chr5 (77-222)||(11230505-11230650)
chr5 (85-222)||(18355609-18355746)
chr5 (77-222)||(11220107-11220252)
chr5 (77-222)||(11224693-11224838)
chr5 (77-222)||(11228516-11228661)
chr5 (83-222)||(40724193-40724332)
chr5 (82-222)||(20295235-20295376)
chr5 (77-222)||(10752576-10752719)
chr5 (77-222)||(15237412-15237556)
chr5 (97-222)||(11226546-11226671)
chr5 (69-169)||(22108009-22108109)
chr5 (77-169)||(20911531-20911623)
chr5 (77-169)||(24767898-24767990)
chr5 (83-169)||(19473315-19473401)
chr5 (165-222)||(22107989-22108046)
chr5 (173-222)||(19473295-19473344)
chr5 (174-222)||(20911511-20911559)
chr5 (164-218)||(33896117-33896171)
chr5 (173-222)||(24767878-24767927)
[»] chr2 (28 HSPs)
chr2 (77-222)||(1282772-1282917)
chr2 (77-222)||(9784394-9784539)
chr2 (77-222)||(31344522-31344666)
chr2 (83-222)||(41531582-41531721)
chr2 (83-222)||(30345593-30345732)
chr2 (83-222)||(24629056-24629196)
chr2 (83-222)||(27380009-27380149)
chr2 (83-222)||(27384055-27384195)
chr2 (83-222)||(27601181-27601321)
chr2 (83-222)||(10102230-10102370)
chr2 (83-222)||(24648744-24648884)
chr2 (125-222)||(12902093-12902190)
chr2 (142-218)||(32215396-32215472)
chr2 (142-218)||(17306255-17306331)
chr2 (171-222)||(38967084-38967135)
chr2 (171-222)||(24367446-24367497)
chr2 (164-218)||(28653710-28653764)
chr2 (164-217)||(24514976-24515029)
chr2 (142-212)||(36838972-36839042)
chr2 (164-202)||(32215445-32215483)
chr2 (6-52)||(357648-357694)
chr2 (164-202)||(17306244-17306282)
chr2 (14-47)||(7672749-7672782)
chr2 (14-47)||(17306158-17306191)
chr2 (14-47)||(24866069-24866102)
chr2 (14-47)||(28653817-28653850)
chr2 (14-47)||(36838875-36838908)
chr2 (12-52)||(1282703-1282743)
[»] scaffold0141 (2 HSPs)
scaffold0141 (83-222)||(14689-14828)
scaffold0141 (12-52)||(14934-14974)
[»] scaffold0016 (1 HSPs)
scaffold0016 (85-222)||(208190-208327)
[»] scaffold0012 (1 HSPs)
scaffold0012 (85-222)||(189979-190116)
[»] scaffold0601 (2 HSPs)
scaffold0601 (56-198)||(8090-8231)
scaffold0601 (142-218)||(8037-8113)
[»] scaffold1852 (1 HSPs)
scaffold1852 (82-222)||(93-234)
[»] scaffold0200 (1 HSPs)
scaffold0200 (77-222)||(11354-11499)
[»] scaffold0109 (3 HSPs)
scaffold0109 (77-222)||(36566-36711)
scaffold0109 (142-214)||(1063-1135)
scaffold0109 (164-202)||(1108-1146)
[»] scaffold0013 (1 HSPs)
scaffold0013 (82-222)||(73896-74036)
[»] scaffold0293 (1 HSPs)
scaffold0293 (74-222)||(20781-20933)
[»] scaffold0372 (1 HSPs)
scaffold0372 (83-222)||(5676-5816)
[»] scaffold0349 (1 HSPs)
scaffold0349 (83-222)||(11811-11951)
[»] scaffold0157 (1 HSPs)
scaffold0157 (83-222)||(33263-33403)
[»] scaffold0061 (3 HSPs)
scaffold0061 (83-222)||(67878-68018)
scaffold0061 (142-218)||(19613-19689)
scaffold0061 (164-201)||(19663-19700)
[»] scaffold0029 (3 HSPs)
scaffold0029 (83-222)||(66101-66240)
scaffold0029 (83-222)||(62185-62324)
scaffold0029 (77-222)||(79925-80071)
[»] scaffold0028 (1 HSPs)
scaffold0028 (83-222)||(59296-59436)
[»] scaffold0486 (2 HSPs)
scaffold0486 (77-222)||(9235-9381)
scaffold0486 (159-218)||(8201-8260)
[»] scaffold0525 (1 HSPs)
scaffold0525 (125-222)||(4446-4543)
[»] scaffold0205 (3 HSPs)
scaffold0205 (142-222)||(29261-29341)
scaffold0205 (164-202)||(29250-29288)
scaffold0205 (14-47)||(29075-29108)
[»] scaffold0494 (2 HSPs)
scaffold0494 (142-218)||(12705-12781)
scaffold0494 (164-202)||(12754-12792)
[»] scaffold0278 (2 HSPs)
scaffold0278 (73-202)||(7137-7274)
scaffold0278 (142-215)||(7247-7317)
[»] scaffold0023 (2 HSPs)
scaffold0023 (142-218)||(18059-18135)
scaffold0023 (164-202)||(18108-18146)
[»] scaffold0019 (1 HSPs)
scaffold0019 (164-222)||(28798-28856)
[»] scaffold0546 (2 HSPs)
scaffold0546 (142-214)||(10666-10738)
scaffold0546 (164-202)||(10655-10693)
[»] scaffold0166 (2 HSPs)
scaffold0166 (77-169)||(10395-10487)
scaffold0166 (173-222)||(10375-10424)
[»] scaffold0207 (6 HSPs)
scaffold0207 (142-215)||(15544-15617)
scaffold0207 (150-202)||(15689-15741)
scaffold0207 (142-202)||(15590-15650)
scaffold0207 (142-202)||(15656-15716)
scaffold0207 (142-202)||(15623-15683)
scaffold0207 (150-202)||(15722-15774)
[»] scaffold1662 (2 HSPs)
scaffold1662 (142-218)||(629-705)
scaffold1662 (164-202)||(678-716)
[»] scaffold0292 (2 HSPs)
scaffold0292 (82-202)||(4329-4449)
scaffold0292 (142-218)||(4422-4498)
[»] scaffold0203 (2 HSPs)
scaffold0203 (142-218)||(19270-19346)
scaffold0203 (164-202)||(19319-19357)
[»] scaffold0452 (1 HSPs)
scaffold0452 (143-218)||(13913-13988)
[»] scaffold0032 (1 HSPs)
scaffold0032 (142-218)||(63450-63526)
[»] scaffold0301 (1 HSPs)
scaffold0301 (164-218)||(10706-10760)
[»] scaffold0003 (1 HSPs)
scaffold0003 (168-222)||(70804-70858)
[»] scaffold0111 (5 HSPs)
scaffold0111 (142-218)||(20010-20086)
scaffold0111 (173-214)||(7093-7134)
scaffold0111 (173-214)||(14212-14253)
scaffold0111 (164-202)||(20059-20097)
scaffold0111 (14-47)||(20150-20183)
[»] scaffold0058 (2 HSPs)
scaffold0058 (142-214)||(832-904)
scaffold0058 (14-52)||(1016-1054)
[»] scaffold1633 (1 HSPs)
scaffold1633 (143-225)||(37-118)
[»] scaffold0040 (1 HSPs)
scaffold0040 (164-218)||(102305-102359)
[»] scaffold0034 (1 HSPs)
scaffold0034 (164-218)||(116619-116673)
[»] scaffold0299 (1 HSPs)
scaffold0299 (178-222)||(6426-6470)
[»] scaffold0096 (1 HSPs)
scaffold0096 (14-52)||(13269-13307)
[»] scaffold0074 (1 HSPs)
scaffold0074 (77-138)||(51314-51375)
[»] scaffold0073 (1 HSPs)
scaffold0073 (162-218)||(56610-56666)
[»] scaffold0863 (1 HSPs)
scaffold0863 (14-47)||(637-670)
[»] scaffold0359 (1 HSPs)
scaffold0359 (162-215)||(15154-15207)
[»] scaffold0077 (1 HSPs)
scaffold0077 (143-187)||(20943-20987)
[»] scaffold0005 (1 HSPs)
scaffold0005 (162-218)||(166827-166883)


Alignment Details
Target: chr4 (Bit Score: 183; Significance: 4e-99; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 4 - 226
Target Start/End: Complemental strand, 631547 - 631326
Alignment:
Q  4 acaacatcatataacaacatcagaatcaatatcataaacaacatagcaatcgtcataagcaactttgacaacgtcatgaacatcgtataatcttcatagg 103  Q
    |||||||||||||||||||||| || ||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  631547 acaacatcatataacaacatcacaaacaacatcataaccaacatagcaatcgtcataagcaactt-gacaacgtcatgaacatcgtataatcttcatagg 631449  T
Q  104 tacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacg 203  Q
    |||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  631448 tacttctttaacaacacatgggtagaatacaactcagcaactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaatg 631349  T
Q  204 actttgactcgacaaatgcaaca 226  Q
    |||||||||||||||||||||||    
T  631348 actttgactcgacaaatgcaaca 631326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 4 - 222
Target Start/End: Complemental strand, 17048903 - 17048686
Alignment:
Q  4 acaacatcatataacaacatcagaatcaatatcataaacaacatagcaatcgtcataagcaactttgacaacgtcatgaacatcgtataatcttcatagg 103  Q
    ||||||| |||||||||||||| || ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17048903 acaacattatataacaacatcacaaacaataccataaacaacatagcaatcgtcataagcaa-tttgacaacgtcatgaacatcgtataatcttcatagg 17048805  T
Q  104 tacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacg 203  Q
    |||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  17048804 tacttctttaacaacacatgggtataatacaactcagcaactcatagatgataattcgttaacaacttaacaactcgtggatgataattcatcaacaacg 17048705  T
Q  204 actttgactcgacaaatgc 222  Q
    ||||||| |||||||||||    
T  17048704 actttgaatcgacaaatgc 17048686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 20160593 - 20160448
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   || |||||||||||||||||| |||||||||||||    
T  20160593 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaattcatagatgataattcatcaacaacttaacaa 20160494  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  20160493 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 20160448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 20157917 - 20157772
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||||||||||||||||| |||||||||| ||| |||||| |||||||   ||||||||||||||||||||| |||||||||||||    
T  20157917 tcataaacatcgtataatcttcataggtacttatttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcaacaacttaacaa 20157818  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  20157817 ctcatggatgataattcatcaacaacgagtttgactcgacaaatgc 20157772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 77 - 219
Target Start/End: Complemental strand, 20163371 - 20163229
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||  |||||| ||||| |   ||||||||||||||||||||| |||||||||||||    
T  20163371 tcataaacatcgtataatcttcataggtacttctttaacaacacataggtagaagacaacccgacaactcatagatgataattcatcaacaacttaacaa 20163272  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaa 219  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  20163271 ctcatggatgataattcatcaacaacgactttgactcgacaaa 20163229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 14954908 - 14954769
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatg 182  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   |||| ||||||||||||||||  ||||||||||||||||||    
T  14954908 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaagacaactcgacaacttatagatgataattcatcgacaacttaacaactcatg 14954809  T
Q  183 gatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14954808 gatgataattcatcaacaacgactttgactcgacaaatgc 14954769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 82 - 222
Target Start/End: Original strand, 10712244 - 10712384
Alignment:
Q  82 aacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||| || |||||||   |||||||||||||||||||||  ||||||||||||||| |    
T  10712244 aacatcgtataatcttcataggtacttctttaacaacacatgggtaaaagacaactcgacaactcatagatgataattcatcgacaacttaacaactcgt 10712343  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  10712344 ggatgataattcatcaacaacgaccttgactcgacaaatgc 10712384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 82 - 222
Target Start/End: Original strand, 10926014 - 10926154
Alignment:
Q  82 aacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||| || |||||||   |||||||||||||||||||||  ||||||||||||||| |    
T  10926014 aacatcgtataatcttcataggtacttctttaacaacacatgggtaaaagacaactcgacaactcatagatgataattcatcgacaacttaacaactcgt 10926113  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  10926114 ggatgataattcatcaacaacgaccttgactcgacaaatgc 10926154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 15224426 - 15224571
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||  |||||| |||||||   |||||||||||||||||||||  ||||||||||||    
T  15224426 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaa 15224525  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||    
T  15224526 ctcatggatgataattcatcaacagcgaccttgactcgacaaatgc 15224571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 5757647 - 5757507
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  5757647 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 5757548  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  5757547 ggatgataattcatcaacaacgaccttgactcgacatatgc 5757507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 9555919 - 9556059
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  9555919 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 9556018  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  9556019 ggatgataattcatcaacaacgaccttgactcgacatatgc 9556059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 12487074 - 12487214
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  12487074 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 12487173  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  12487174 ggatgataattcatcaacaacgaccttgactcgacatatgc 12487214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 14758144 - 14758004
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  14758144 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 14758045  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  14758044 ggatgataattcatcaacaacgaccttgactcgacatatgc 14758004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 33741769 - 33741909
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  33741769 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 33741868  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  33741869 ggatgataattcatcaacaacgaccttgactcgacatatgc 33741909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 4562042 - 4561902
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    ||||||||||||| || |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  ||||||| |||||||||    
T  4562042 acatcgtataatcctcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttgacaactcat 4561943  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  4561942 ggatgataattcatcaacaacgaccttgactcgacatatgc 4561902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 218
Target Start/End: Original strand, 37018300 - 37018436
Alignment:
Q  82 aacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||| ||||||||||||| ||||||| | |||||||  ||  ||||| ||||||||  |||| || ||||| || |||| ||||||||||||||||||    
T  37018300 aacatcatataatcttcataagtacttcatgaacaacacgtggatagaagacaactcaacaacttatggatgacaactcatcaacaacttaacaactcat 37018399  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||| || |||||||||||||||||||||||||||    
T  37018400 ggatgacaactcatcaacaacgactttgactcgacaa 37018436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 3484804 - 3484880
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3484804 aactcatggatgataattcaacaacaacttaacagctcatggatgataattcatcaacaacgactttgactcgacaa 3484880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 17809723 - 17809803
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  17809723 aactcatggatgataattcatcgacaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacatatgc 17809803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 25689292 - 25689378
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaac 169  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   ||||||||||||||||||||| ||||||    
T  25689292 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcaacaac 25689378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 14548469 - 14548555
Alignment:
Q  132 acaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||| || ||||||| ||||| || |||| ||||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  14548469 acaacttagcaactcatggatgacaactcatcaacaacttaacaactcaaggatgacaactcatcaacaacgactttgactcgacaa 14548555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 82 - 218
Target Start/End: Complemental strand, 35812776 - 35812632
Alignment:
Q  82 aacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaact--------catagatgataattcattaacaacttaa 173  Q
    |||||| ||||||||||||| | ||||| ||||||||| |||  ||||| ||||||||  ||||        ||| ||||| || |||| ||||||||||    
T  35812776 aacatcatataatcttcataagcacttcattaacaacacatggatagaagacaactcaacaacttaacaattcatggatgacaactcatcaacaacttaa 35812677  T
Q  174 caactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||||||||||  | |||||||||||||||||||||||||||    
T  35812676 caactcatggatgacgactcatcaacaacgactttgactcgacaa 35812632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 15042377 - 15042323
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  15042377 aacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 15042323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 15112047 - 15112101
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  15112047 aacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 15112101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 25090443 - 25090497
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  25090443 aacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 25090497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 13592611 - 13592535
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||| || |||| ||||||||||||||||||||||||  | |||||||||||||||||||||| ||||    
T  13592611 aactcatggatgacaactcatcaacaacttaacaactcatggatgacgactcatcaacaacgactttgactcaacaa 13592535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 16997294 - 16997369
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 217  Q
    ||||||| ||||  || |||| |||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  16997294 aactcatggatgtcaactcatcaacaacttaacaactcatggatgacaactcattaacaacgactttgactcgaca 16997369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 27533400 - 27533479
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcat 162  Q
    |||||||||||||||| |||||||||||||||||||| ||| ||||||  ||||||   ||||||| |||||||||||||    
T  27533400 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacgcaactcgacaactcatggatgataattcat 27533479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 25689349 - 25689398
Alignment:
Q  173 acaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  25689349 acaactcatagatgataattcatcaacaacgaccttgactcgacaaatgc 25689398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 27533457 - 27533506
Alignment:
Q  173 acaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  27533457 acaactcatggatgataattcatcgacaacgactttgactcgacgaatgc 27533506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 3484793 - 3484831
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  3484793 aacaacttaacaactcatggatgataattcaacaacaac 3484831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 42874589 - 42874642
Alignment:
Q  165 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||| ||||||||||| |||| || ||||||||||||||||||| |||||||    
T  42874589 acaactcaacaactcatgaatgacaactcatcaacaacgactttgattcgacaa 42874642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 17807517 - 17807564
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaa 130  Q
    |||||||| ||||||| |||||||||||||||||||| ||| ||||||    
T  17807517 acatcgtaaaatcttcgtaggtacttctttaacaacacatgggtagaa 17807564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 13592622 - 13592584
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||| || |||||||||||    
T  13592622 aacaacttaacaactcatggatgacaactcatcaacaac 13592584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 33185518 - 33185552
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacata 48  Q
    |||||||||||| ||||||||||||||||||||||    
T  33185518 ataacaacatcataatcaatatcataaacaacata 33185552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 13592773 - 13592740
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  13592773 ataacaacatcataatcaatatcataaacaacat 13592740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 15042462 - 15042429
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  15042462 ataacaacatcataatcaatatcataaacaacat 15042429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 15111962 - 15111995
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  15111962 ataacaacatcataatcaatatcataaacaacat 15111995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 16997197 - 16997230
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  16997197 ataacaacatcataatcaatatcataaacaacat 16997230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 25090357 - 25090390
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  25090357 ataacaacatcataatcaatatcataaacaacat 25090390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 10712193 - 10712233
Alignment:
Q  12 atataacaacatcagaatcaatatcataaacaacatagcaa 52  Q
    ||||||||| |||| |||||||||| |||||||||||||||    
T  10712193 atataacaatatcataatcaatatcttaaacaacatagcaa 10712233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 10925963 - 10926003
Alignment:
Q  12 atataacaacatcagaatcaatatcataaacaacatagcaa 52  Q
    ||||||||| |||| |||||||||| |||||||||||||||    
T  10925963 atataacaatatcataatcaatatcttaaacaacatagcaa 10926003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 14650409 - 14650465
Alignment:
Q  162 ttaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||| ||||| ||||||| | || | ||| |||||||||||||||||||||    
T  14650409 ttaacaacttgacaacgcatggataaaaacttatcgacaacgactttgactcgacaa 14650465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 4 - 226
Target Start/End: Complemental strand, 25389 - 25169
Alignment:
Q  4 acaacatcatataacaacatcagaatcaatatcataaacaacatagcaatcgtcataagcaactttgacaacgtcatgaacatcgtataatcttcatagg 103  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  25389 acaacatcacataacaacatcacaatcaatatcataaacaacatagcaatcgtcata-gcaactt-gacaacgtcatgaacatcgtataatcttcatagg 25292  T
Q  104 tacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacg 203  Q
    |||||||||||||||| ||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25291 tacttctttaacaacacatgggtagaatacaactcagcaactcgtagatgataattcattaacaacttaacaactcatggatgataattcatcaacaatg 25192  T
Q  204 actttgactcgacaaatgcaaca 226  Q
    |||||||||||||||||||||||    
T  25191 actttgactcgacaaatgcaaca 25169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 175; Significance: 2e-94; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 4 - 222
Target Start/End: Original strand, 16795823 - 16796040
Alignment:
Q  4 acaacatcatataacaacatcagaatcaatatcataaacaacatagcaatcgtcataagcaactttgacaacgtcatgaacatcgtataatcttcatagg 103  Q
    |||| ||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16795823 acaaaatcatataacaacatcacaaacaacatcataaacaacatagcaatcgtcataagcaactt-gacaacgtcatgaacatcgtataatcttcatagg 16795921  T
Q  104 tacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacg 203  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16795922 tacttctttaacaacacatgagtagaatacaactcagcaactcatagatgataattcattaataacttaacaactcatggatgataattcatcaacaacg 16796021  T
Q  204 actttgactcgacaaatgc 222  Q
    |||| |||| |||||||||    
T  16796022 acttcgactagacaaatgc 16796040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 12853041 - 12852883
Alignment:
Q  68 ttgacaacgtcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaaca 167  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| || |||||| |||||||||||||||||||    
T  12853041 ttgaccacgtcatgaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactaagaaactcaaagatgataattcattaaca 12852942  T
Q  168 acttaacaactcatggatgataattcatcaacaacgactttgactcgacaaatgcaaca 226  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  12852941 acttaacaactcatggatgataattcatcaacaataactttgactcgacaaatgcaaca 12852883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 14665037 - 14665182
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   ||||||||||||||||||||| |||||||||||||    
T  14665037 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcaacaacttaacaa 14665136  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  14665137 ctcatgaatgataattcatcaacaacgactttgactcgacaaatgc 14665182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 14668193 - 14668338
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| | |||||   ||||||||||||||||||||| |||||||||||||    
T  14668193 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagataactcgacaactcatagatgataattcatcaacaacttaacaa 14668292  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14668293 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 14668338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 77 - 221
Target Start/End: Original strand, 15464486 - 15464630
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   ||||| ||||||||||||||| |||||||||||||    
T  15464486 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcgtagatgataattcatcaacaacttaacaa 15464585  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatg 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  15464586 ctcatggatgataattcatcaacaacgactttgactcgacaaatg 15464630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 12339088 - 12339232
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||| |||||||||||||||||||||||||||| ||| |||||| ||||||||  ||||||||||||||||||||| |||||||||||||    
T  12339088 tcataaacatcgtaaaatcttcataggtacttctttaacaacacatg-gtagaagacaactcaacaactcatagatgataattcatcaacaacttaacaa 12339186  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  12339187 ctcatggatgataattcatcaacaacgactttgactcgagaaatgc 12339232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 77 - 221
Target Start/End: Complemental strand, 16751063 - 16750919
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||  |||||| |||||| |  |||||||||||||||||||||| ||||||||||||    
T  16751063 tcatgaacatcgtataatcttcgtaggtacttctttaacaacacataggtagaagacaacttaacaactcatagatgataattcattgacaacttaacaa 16750964  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatg 221  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  16750963 ctcatggatgataattcatcaacaacgaccttgactcgacaaatg 16750919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 15964337 - 15964476
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatg 182  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||||||||    
T  15964337 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaactcatg 15964436  T
Q  183 gatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15964437 gatgataattcatcaacaacgactttgactcgacaaatgc 15964476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 15968261 - 15968400
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatg 182  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||||||||    
T  15968261 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaactcatg 15968360  T
Q  183 gatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15968361 gatgataattcatcaacaacgactttgactcgacaaatgc 15968400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 15972185 - 15972324
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatg 182  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||||||||    
T  15972185 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaactcatg 15972284  T
Q  183 gatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15972285 gatgataattcatcaacaacgactttgactcgacaaatgc 15972324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 37440353 - 37440214
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatg 182  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||||||||    
T  37440353 acatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaactcatg 37440254  T
Q  183 gatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  37440253 gatgataattcatcaacaacgaccttgactcgacaaatgc 37440214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 8489906 - 8489764
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||   |||||||||||    
T  8489906 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcat---caacttaacaa 8489810  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  8489809 ctcatggatgaaaattcatcaacaacgactttgactcgacaaatgc 8489764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 19774954 - 19775099
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||  |||||| |||||||   |||||||||||||||||||||  ||||||||||||    
T  19774954 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaa 19775053  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  19775054 ctcatggatgataattcatcaacaacgaccttgactcgacaaatgc 19775099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 4589635 - 4589490
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||| |||| |||||||||||||||||||| ||  |||||| |||||||   |||||||||||||||||||||  ||||||||||||    
T  4589635 tcataaacatcgtataaccttcgtaggtacttctttaacaacacataggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaa 4589536  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||    
T  4589535 ctcatagatgataattcatcaacaacaactttgactcgacaaatgc 4589490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 11069460 - 11069600
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  11069460 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 11069559  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  11069560 ggatgataattcatcaacaacgaccttgactcgacatatgc 11069600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 14498717 - 14498857
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  14498717 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 14498816  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  14498817 ggatgataattcatcaacaacgaccttgactcgacatatgc 14498857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 22321056 - 22321196
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  22321056 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 22321155  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  22321156 ggatgataattcatcaacaacgaccttgactcgacatatgc 22321196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 22336111 - 22336251
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  22336111 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 22336210  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  22336211 ggatgataattcatcaacaacgaccttgactcgacatatgc 22336251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 27410361 - 27410221
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  27410361 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 27410262  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  27410261 ggatgataattcatcaacaacgaccttgactcgacatatgc 27410221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 28949114 - 28949254
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  28949114 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 28949213  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  28949214 ggatgataattcatcaacaacgaccttgactcgacatatgc 28949254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 55022257 - 55022397
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||||||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  55022257 acatcgtacaatcttcgtaggtacttctttaacaacacatgggtagaatacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 55022356  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  55022357 ggatgataattcatcaacaacgaccttgactcgacatatgc 55022397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 17317850 - 17317705
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||| ||| | |||||||||||||||||||||  |||||| |||||||   |||||||||||||||||||||  || |||||||||    
T  17317850 tcataaacatcgtataatattcgttggtacttctttaacaacatataggtagaagacaactcgacaactcatagatgataattcatcgacgacttaacaa 17317751  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
     |||||||||||||||||||||||||||| ||||||||||||||||    
T  17317750 ttcatggatgataattcatcaacaacgaccttgactcgacaaatgc 17317705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 7109088 - 7109228
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||  |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  7109088 acatcgtataatcttcgtaggtacttctttaacaacacataggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 7109187  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  7109188 ggatgataattcatcaacaacgaccttgactcgacatatgc 7109228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 7113023 - 7113163
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||  |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  7113023 acatcgtataatcttcgtaggtacttctttaacaacacataggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 7113122  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  7113123 ggatgataattcatcaacaacgaccttgactcgacatatgc 7113163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 15616766 - 15616906
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| | ||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  15616766 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacataactcgacaaactcatggatgataattcatcgacaacttaacaactcat 15616865  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  15616866 ggatgataattcatcaacaacgaccttgactcgacatatgc 15616906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 4108116 - 4107985
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  4108116 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaagacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 4108017  T
Q  182 ggatgataattcatcaacaacgactttgactc 213  Q
    |||||||||||||||||||||||| |||||||    
T  4108016 ggatgataattcatcaacaacgaccttgactc 4107985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 4111968 - 4111837
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  4111968 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaagacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 4111869  T
Q  182 ggatgataattcatcaacaacgactttgactc 213  Q
    |||||||||||||||||||||||| |||||||    
T  4111868 ggatgataattcatcaacaacgaccttgactc 4111837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 11166246 - 11166106
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||  |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  11166246 acatcgtataatctttgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 11166147  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| |||| |||||| ||||    
T  11166146 ggatgataattcatcaacaacgaccttgaatcgacatatgc 11166106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 5222774 - 5222854
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5222774 aactcatagatgataattcatcaacaacttaacaactcatggatgataatttatcaacaacgactttgactcgacaaatgc 5222854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 14670449 - 14670602
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactca--------tagatgataattcattaacaa 168  Q
    |||| |||||| ||||||||||||||||||||||||||||||| ||| || ||| ||||||||  ||||||        | ||||| || || | |||||    
T  14670449 tcataaacatcatataatcttcataggtacttctttaacaacacatgggttgaagacaactcaacaactcaacaactcatggatgacaactcgtcaacaa 14670548  T
Q  169 cttaacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14670549 cttaacaactcatggatgacaattcatcaacaacgactttgactcgacaaatgc 14670602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 14681971 - 14682124
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaact--------catagatgataattcattaacaa 168  Q
    |||| |||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||||  ||||        ||| ||||| || |  | |||||    
T  14681971 tcataaacatcatataatcttcataggtacttctttaacaacacatgggtagaagacaactcaacaacttaacaactcatggatgacaacttgtcaacaa 14682070  T
Q  169 cttaacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  14682071 cttaacaactcatgcatgacaattcatcaacaacgactttgactcgacaaatgc 14682124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 46821903 - 46821974
Alignment:
Q  147 atagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46821903 atagaagataactcaataacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 46821974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 18700945 - 18700869
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||| || |||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  18700945 aactcatggatgacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 18700869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 225
Target Start/End: Complemental strand, 2842737 - 2842655
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaaatgcaac 225  Q
    ||||||| ||||| || |||| |||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||    
T  2842737 aactcatggatgacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcga-aaatgcaac 2842655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 218
Target Start/End: Complemental strand, 10543158 - 10543014
Alignment:
Q  82 aacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcag-----taac---tcatagatgataattcattaacaacttaa 173  Q
    |||||| ||||||||||||| | ||||| ||||||||| ||| |||||| ||||||||      ||||   || | ||||| || |||| ||||||||||    
T  10543158 aacatcatataatcttcataagcacttcattaacaacacatgggtagaagacaactcaacaatttaacgaatcgtggatgacaactcatcaacaacttaa 10543059  T
Q  174 caactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||||| || |||||||||||||||||||||||||||    
T  10543058 caactcatggatgacaactcatcaacaacgactttgactcgacaa 10543014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 13543678 - 13543728
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcg 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13543678 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcg 13543728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 12120220 - 12120169
Alignment:
Q  171 taacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12120220 taacaactcatggatgataattcatcaacaacgactttgactcaacaaatgc 12120169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 38962338 - 38962287
Alignment:
Q  171 taacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38962338 taacaactcatgaatgataattcatcaacaacgactttgactcgacaaatgc 38962287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 35353360 - 35353414
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  35353360 aacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 35353414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 14441077 - 14441153
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||| ||||||| |||||||||||| ||||||||| | || ||||| |||||||||||||||||||||    
T  14441077 aactcatggatgacaattcatcaacaacttaacagctcatggataacaactcatcgacaacgactttgactcgacaa 14441153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 42353731 - 42353679
Alignment:
Q  166 caacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  42353731 caacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 42353679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 202
Target Start/End: Original strand, 14440973 - 14441104
Alignment:
Q  72 caacgtcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagat-gataattcattaacaact 170  Q
    |||| |||| |||||||||||||||||||| | ||||  ||||||||| |||  ||||| ||||||||  ||||||| ||| ||  |   || |||||||    
T  14440973 caacatcataaacatcgtataatcttcataagcactttattaacaacacatggatagaagacaactcaacaactcatggatagaagacaaatcaacaact 14441072  T
Q  171 taacaactcatggatgataattcatcaacaac 202  Q
    ||||||||||||||||| ||||||||||||||    
T  14441073 taacaactcatggatgacaattcatcaacaac 14441104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 10562478 - 10562532
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||| ||||||||||||| || |||||||||||||||||||||||||||    
T  10562478 aacaacttaataactcatggatgacaactcatcaacaacgactttgactcgacaa 10562532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 5214723 - 5214776
Alignment:
Q  165 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||||| ||||||||||||| || |||||||||||||||||||||||||||    
T  5214723 acaacttaataactcatggatgacaactcatcaacaacgactttgactcgacaa 5214776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 13521039 - 13520978
Alignment:
Q  141 taactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||| ||||| || |||| |||||||||||||||||||||||| ||||||||||||||    
T  13521039 taactcatggatgacaactcatcaacaacttaacaactcatggatgaaaattcatcaacaac 13520978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 30065372 - 30065452
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcat 162  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| || |||| |  ||||||| |||||||||||||    
T  30065372 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacaccactcgacaaactcatggatgataattcat 30065452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 43890255 - 43890179
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||| || || | |||||||||||||  ||||||||| || |||||||||||||||||||||||||||    
T  43890255 aactcatggatgacaactcgtcaacaacttaacaatccatggatgacaactcatcaacaacgactttgactcgacaa 43890179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 30065432 - 30065479
Alignment:
Q  175 aactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  30065432 aactcatggatgataattcatcgacaacgaccttgactcgacaaatgc 30065479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 19884861 - 19884816
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttg 209  Q
    |||||||||||||||||||||||| || ||||||||||||||||||    
T  19884861 aacaacttaacaactcatggatgacaactcatcaacaacgactttg 19884816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 44269408 - 44269453
Alignment:
Q  173 acaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||||||||||| || |||||||||||||||||||||||||||    
T  44269408 acaactcatggatgacaactcatcaacaacgactttgactcgacaa 44269453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 5220536 - 5220572
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaaca 119  Q
    ||||| |||||||||||||||||||||||||||||||    
T  5220536 acatcatataatcttcataggtacttctttaacaaca 5220572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 15565319 - 15565371
Alignment:
Q  150 gatgataattcattaacaacttaacaactcatggatgataattcatcaacaac 202  Q
    ||||| ||||||| |||||| |||||||||| |||||| ||||||||||||||    
T  15565319 gatgacaattcatcaacaacctaacaactcacggatgacaattcatcaacaac 15565371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 5214582 - 5214616
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacata 48  Q
    |||||||||||| ||||||||||||||||||||||    
T  5214582 ataacaacatcataatcaatatcataaacaacata 5214616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 14670382 - 14670420
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacatagcaa 52  Q
    ||||||| |||| ||||||||||||||||||||||||||    
T  14670382 ataacaatatcataatcaatatcataaacaacatagcaa 14670420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 15565300 - 15565338
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  15565300 aacaacttaacaactcgtggatgacaattcatcaacaac 15565338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 18700956 - 18700918
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||| || |||||||||||    
T  18700956 aacaacttaacaactcatggatgacaactcatcaacaac 18700918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 2842834 - 2842801
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  2842834 ataacaacatcataatcaatatcataaacaacat 2842801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 5214614 - 5214647
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  5214614 ataacaacatcataatcaatatcataaacaacat 5214647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 31414905 - 31414938
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  31414905 ataacaacatcataatcaatatcataaacaacat 31414938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 35353274 - 35353307
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  35353274 ataacaacatcataatcaatatcataaacaacat 35353307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 44269340 - 44269373
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  44269340 ataacaacatcataatcaatatcataaacaacat 44269373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 14067345 - 14067289
Alignment:
Q  125 gtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||| |||||||   ||||||| |||||||||||||  |||||||||||||||||    
T  14067345 gtagaacacaactcgacaactcatggatgataattcatcgacaacttaacaactcat 14067289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 174; Significance: 1e-93; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 3043 - 3259
Alignment:
Q  4 acaacatcatataacaacatcagaatcaatatcataaacaacatagcaatcgtcataagcaactttgacaacgtcatgaacatcgtataatcttcatagg 103  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  3043 acaacatcatataacaacatcacaaacaatatcataaacaacatagcaatcgtcctaagcaactt-gacaacgtcatgaacatcgtataatcttcatagg 3141  T
Q  104 tacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacg 203  Q
    |||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||    
T  3142 tacttctttaacaacacatgggtagaatacaactcagcaactcatagatgataattcgttaacaacttagcaacacatggatgataattcatcaacaacg 3241  T
Q  204 actttgactcgacaaatg 221  Q
    ||||||||||||||||||    
T  3242 actttgactcgacaaatg 3259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 7106 - 7322
Alignment:
Q  4 acaacatcatataacaacatcagaatcaatatcataaacaacatagcaatcgtcataagcaactttgacaacgtcatgaacatcgtataatcttcatagg 103  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  7106 acaacatcatataacaacatcacaaacaatatcataaacaacatagcaatcgtcctaagcaactt-gacaacgtcatgaacatcgtataatcttcatagg 7204  T
Q  104 tacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacg 203  Q
    |||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||    
T  7205 tacttctttaacaacacatgggtagaatacaactcagcaactcatagatgataattcgttaacaacttagcaacacatggatgataattcatcaacaacg 7304  T
Q  204 actttgactcgacaaatg 221  Q
    ||||||||||||||||||    
T  7305 actttgactcgacaaatg 7322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 172 - 385
Alignment:
Q  4 acaacatcatataacaacatcagaatcaatatcataaacaacatagcaatcgtcataagcaactttgacaacgtcatgaacatcgtataatcttcatagg 103  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  172 acaacatcatataacaacatcacaatcaatatcataaacaacaaagcaatcgtcataagcaactt-gacaacatcatgaacatcgtataatcttcatagg 270  T
Q  104 tacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacg 203  Q
    |||||||||||||||| ||| |||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  271 tacttctttaacaacacatgggtagaataaaactcagcaactcatagatgataattcattaacaacttgacaactcatggatgataattcatcaacaacg 370  T
Q  204 actttgactcgacaa 218  Q
    || |||||| |||||    
T  371 acattgacttgacaa 385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 16 - 226
Target Start/End: Original strand, 18301625 - 18301834
Alignment:
Q  16 aacaacatcagaatcaatatcataaacaacatagcaatcgtcataagcaactttgacaacgtcatgaacatcgtataatcttcataggtacttctttaac 115  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||    
T  18301625 aacaacatcacaatcaatatcataaacaacatagcaatcatcataagcaactta-acaacgtcatgaacatcgtgtaatcttcataggtacttctttaac 18301723  T
Q  116 aacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 215  Q
    |||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18301724 aacacatgggtagaatacaactcagcaactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaatgactttgactcga 18301823  T
Q  216 caaatgcaaca 226  Q
    ||||| |||||    
T  18301824 caaatacaaca 18301834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 83 - 225
Target Start/End: Original strand, 20487186 - 20487328
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatg 182  Q
    ||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||||  ||||||||||||||||||||| |||||||||||||||||||    
T  20487186 acatcatataatcttcataggtacttctttaacaacacatgggtagaagacaactcaacaactcatagatgataattcatcaacaacttaacaactcatg 20487285  T
Q  183 gatgataattcatcaacaacgactttgactcgacaaatgcaac 225  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  20487286 gatgataattcatcaacaacgactttgactcgacaaattcaac 20487328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 12705381 - 12705236
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||    
T  12705381 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaa 12705282  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  12705281 ctcatggatgataattcatcaacaacgaccttgactcgacaaatgc 12705236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 13919217 - 13919072
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||    
T  13919217 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaa 13919118  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  13919117 ctcatggatgataattcatcaacaacgactttgactcgacagatgc 13919072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 74 - 222
Target Start/End: Complemental strand, 25927968 - 25927818
Alignment:
Q  74 acgtcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcat--taacaactt 171  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||||  |||||||||||||||||||||   || |||||    
T  25927968 acgtcataaacatcatataatcttcataggtacttctttaacaacacatgggtagaagacaactcaacaactcatagatgataattcatcaaaaaaactt 25927869  T
Q  172 aacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25927868 aacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 25927818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 45170747 - 45170608
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatg 182  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||||||||    
T  45170747 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaaaacaactcgacaactcatagatgataattcatcgacaacttaacaactcatg 45170648  T
Q  183 gatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45170647 gatgataattcatcaacaacgactttgactcgacaaatgc 45170608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 2530876 - 2530731
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||||||||| |||||||||||||||||| ||| |||||| |||||||   ||||| ||||||||||||||| |||||||||||||    
T  2530876 tcataaacatcgtataatcttcatgggtacttctttaacaacacatgggtagaagacaactcgacaactcttagatgataattcatcaacaacttaacaa 2530777  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
     |||||||||||||||||||||||||||||||||||||||||||||    
T  2530776 ttcatggatgataattcatcaacaacgactttgactcgacaaatgc 2530731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 2832919 - 2832774
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||  |||||| |||||||   ||||||||||||||||||||| |||||||||||||    
T  2832919 tcataaacatcgtataatcttcataggtacttctttaacaacacataggtagaagacaactcgacaactcatagatgataattcatcaacaacttaacaa 2832820  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
     ||||||||||||||||||||||||||||||||||| |||||||||    
T  2832819 atcatggatgataattcatcaacaacgactttgacttgacaaatgc 2832774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 15083555 - 15083700
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   ||||||||||||||| |||||  ||||||||||||    
T  15083555 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgatatttcatcgacaacttaacaa 15083654  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  15083655 ctcatggatgataattcatcaacaacgaccttgactcgacaaatgc 15083700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 1859546 - 1859401
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||   ||||| |||||||||||||||  ||||||||||||    
T  1859546 tcataaacatcgtataaccttcataggtacttctttaacaacacatgggtagaaaacaactcgacaactcgtagatgataattcatcgacaacttaacaa 1859447  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  1859446 ctcatggatgataattcatcaacaacgactttgactcgacagatgc 1859401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 39721625 - 39721770
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   ||||||| |||||||||||||  ||||||||||||    
T  39721625 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatggatgataattcatcgacaacttaacaa 39721724  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  39721725 ctcatggatgataattcattaacaacgaccttgactcgacaaatgc 39721770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 18425044 - 18425189
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||  |||||| |||||||   |||||||||||||||||||||  ||||||||||||    
T  18425044 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaa 18425143  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||    
T  18425144 ctcatggatgataactcatcaacaacgaccttgactcgacaaatgc 18425189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 26291756 - 26291901
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||  || ||| |||||||   |||||||||||||||||||||  ||||||||||||    
T  26291756 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcatagatgataattcatcgacaacttaacaa 26291855  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  26291856 ctcatggatgataattcatcaacaacgaccttgactcgacaaatgc 26291901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 71484 - 71344
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  71484 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 71385  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  71384 ggatgataattcatcaacaacgaccttgactcgacatatgc 71344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 75593 - 75453
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  75593 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 75494  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  75493 ggatgataattcatcaacaacgaccttgactcgacatatgc 75453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 16907928 - 16907788
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  16907928 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 16907829  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  16907828 ggatgataattcatcaacaacgaccttgactcgacatatgc 16907788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 18282755 - 18282895
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  18282755 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 18282854  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  18282855 ggatgataattcatcaacaacgaccttgactcgacatatgc 18282895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 32498 - 32638
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||  |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  32498 acatcgtataatcttcgtaggtacttctttaacaacacataggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 32597  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  32598 ggatgataattcatcaacaacgaccttgactcgacatatgc 32638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 12718057 - 12718197
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||| | ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  12718057 acatcgtataatcttcgtaggtacttctttaacaatacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 12718156  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  12718157 ggatgataattcatcaacaacgaccttgactcgacatatgc 12718197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 12722968 - 12723108
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||| | ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  12722968 acatcgtataatcttcgtaggtacttctttaacaatacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 12723067  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  12723068 ggatgataattcatcaacaacgaccttgactcgacatatgc 12723108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 16113630 - 16113770
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||  |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  16113630 acatcgtataatcttcgtaggtacttctttaacaacacataggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 16113729  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  16113730 ggatgataattcatcaacaacgaccttgactcgacatatgc 16113770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 16116783 - 16116923
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||  |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  16116783 acatcgtataatcttcgtaggtacttctttaacaacacataggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 16116882  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  16116883 ggatgataattcatcaacaacgaccttgactcgacatatgc 16116923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 18278792 - 18278932
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  18278792 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 18278891  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| |||||| |||| ||||    
T  18278892 ggatgataattcatcaacaacgaccttgacttgacatatgc 18278932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 24274799 - 24274875
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24274799 aactcatggatgataattcatcaacaacttaacaactcatggatgataattcctcaacaacgactttgactcgacaa 24274875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 7519762 - 7519677
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcat 162  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||    
T  7519762 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcat 7519677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 82 - 218
Target Start/End: Original strand, 16585087 - 16585231
Alignment:
Q  82 aacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaact--------catagatgataattcattaacaacttaa 173  Q
    |||||| ||||||||||||| | ||||| ||||||||| ||| |||||| ||||||||  ||||        ||| ||||| || |||| ||||||||||    
T  16585087 aacatcatataatcttcataagcacttcattaacaacacatgggtagaagacaactcaacaacttaacgactcatggatgacaactcatcaacaacttaa 16585186  T
Q  174 caactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||||| || |||||||||||||||||||||||||||    
T  16585187 caactcatggatgacaactcatcaacaacgactttgactcgacaa 16585231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 16579257 - 16579332
Alignment:
Q  143 actcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||| ||||| || |||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  16579257 actcatggatgacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 16579332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 16586405 - 16586330
Alignment:
Q  143 actcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||| ||||| || |||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  16586405 actcatggatgacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 16586330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 15605934 - 15605869
Alignment:
Q  157 attcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||| ||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||    
T  15605934 attcatcaacaactcaaaaactcatggatgataattcatcaacaacgaatttgactcgacaaatgc 15605869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 14257924 - 14257996
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcg 214  Q
    ||||||| ||||| ||||| | |||||||||||||||||||||||| || |||||||||||||||||||||||    
T  14257924 aactcatggatgacaattcctcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcg 14257996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 16461560 - 16461500
Alignment:
Q  158 ttcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||    
T  16461560 ttcattaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcaacaa 16461500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 20585203 - 20585279
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||| || |||| |||||||||||||||||||||||| || |||||||||| ||||||||||||||||    
T  20585203 aactcatggatgacaactcatcaacaacttaacaactcatggatgacaactcatcaacaatgactttgactcgacaa 20585279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 12714353 - 12714408
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc 138  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||    
T  12714353 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactc 12714408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 202
Target Start/End: Original strand, 14257823 - 14257951
Alignment:
Q  82 aacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaact--------catagatgataattcattaacaacttaa 173  Q
    |||||| ||||||||||||| | ||||| ||||||||| ||| |||||| ||||||||  ||||        ||| ||||| ||||| | ||||||||||    
T  14257823 aacatcatataatcttcataagcacttcattaacaacacatgggtagaagacaactcaacaacttaacaactcatggatgacaattcgtcaacaacttaa 14257922  T
Q  174 caactcatggatgataattcatcaacaac 202  Q
    |||||||||||||| ||||| ||||||||    
T  14257923 caactcatggatgacaattcctcaacaac 14257951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 15082370 - 15082324
Alignment:
Q  171 taacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  15082370 taacaactcatggatgataattcatc-acaacgactttgactcgacaa 15082324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 14183873 - 14183819
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||||||||||||||| || | ||||| |||||||||||||||||||    
T  14183873 aacaacttaacaactcatggatgacaactaatcaaaaacgactttgactcgacaa 14183819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 14933156 - 14933118
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14933156 aacaacttaacaactcatggatgataattcatcaacaac 14933118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 15356591 - 15356553
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15356591 aacaacttaacaactcatggatgataattcatcaacaac 15356553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 15360705 - 15360667
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15360705 aacaacttaacaactcatggatgataattcatcaacaac 15360667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 24274788 - 24274826
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24274788 aacaacttaacaactcatggatgataattcatcaacaac 24274826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 32300804 - 32300858
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||||||| |||||||||||| || |||||||||||||||||||||| ||||    
T  32300804 aacaacttaacgactcatggatgacaactcatcaacaacgactttgactcaacaa 32300858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 12466526 - 12466473
Alignment:
Q  165 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||||||||||||||||||| || |||||||||| |||||||| |||||||    
T  12466526 acaacttaacaactcatggatgacaactcatcaacaatgactttgattcgacaa 12466473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 32300747 - 32300804
Alignment:
Q  82 aacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactca 139  Q
    |||||||||||||||||||| | ||||| ||||||||| ||| |||||| ||||||||    
T  32300747 aacatcgtataatcttcataagcacttcattaacaacacatgggtagaagacaactca 32300804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 20585192 - 20585230
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||| || |||||||||||    
T  20585192 aacaacttaacaactcatggatgacaactcatcaacaac 20585230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 14933311 - 14933278
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  14933311 ataacaacatcataatcaatatcataaacaacat 14933278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 15356746 - 15356713
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  15356746 ataacaacatcataatcaatatcataaacaacat 15356713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 15360860 - 15360827
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  15360860 ataacaacatcataatcaatatcataaacaacat 15360827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 15360904 - 15360871
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  15360904 ataacaacatcataatcaatatcataaacaacat 15360871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 38479733 - 38479766
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  38479733 ataacaacatcataatcaatatcataaacaacat 38479766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 5e-86; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 14 - 222
Target Start/End: Original strand, 48602804 - 48603010
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacatagcaatcgtcataagcaactttgacaacgtcatgaacatcgtataatcttcataggtacttcttta 113  Q
    |||| ||||||| |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48602804 ataataacatcacaatcaatatcataaacaacatagcaa-catcataagcaactt-gacaacgtcatgaacatcgtataatcttcataggtacttcttta 48602901  T
Q  114 acaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactc 213  Q
    |||||| ||| |||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  48602902 acaacacatgggtagaagacaactcagcaactcatagatgataattcattaacagcttaacaactcatggatgataattcatcaacaacgactttgactc 48603001  T
Q  214 gacaaatgc 222  Q
    |||||||||    
T  48603002 gacaaatgc 48603010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 222
Target Start/End: Complemental strand, 22131663 - 22131457
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacatagcaatcgtcataagcaactttgacaacgtcatgaacatcgtataatcttcataggtacttcttta 113  Q
    |||||||||||| |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22131663 ataacaacatcataatcaatatcataaacaacatagcaa-catcataagcaactt-gacaacgtcatgaacatcgtataatcttcataggtacttcttta 22131566  T
Q  114 acaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactc 213  Q
    |||||| ||| |||||  ||| ||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22131565 acaacacatgggtagatgacagctcaacaactcatagatgataattcatcaacaacttaacaactcatggatgataattcatcaacaacgactttgactc 22131466  T
Q  214 gacaaatgc 222  Q
    |||||||||    
T  22131465 gacaaatgc 22131457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 41782020 - 41781875
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||||  ||||||||||||||||||||| |||||||||||||    
T  41782020 tcataaacatcatataatcttcataggtacttctttaacaacacatgggtagaagacaactcaacaactcatagatgataattcatcaacaacttaacaa 41781921  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||    
T  41781920 ctcatggatgataattcatcaacaacagctttgactcgacaaatgc 41781875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 1925870 - 1925731
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatg 182  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||||||||    
T  1925870 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaactcatg 1925771  T
Q  183 gatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  1925770 gatgataattcatcaacaacgaccttgactcgacaaatgc 1925731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 20924884 - 20924745
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatg 182  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||||||||    
T  20924884 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaactcatg 20924785  T
Q  183 gatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  20924784 gatgataattcatcaacaacgaccttgactcgacaaatgc 20924745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 41388740 - 41388597
Alignment:
Q  78 catgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaac 177  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||  |||||| |||||||   |||||||||||||||||||||  |||||||||||||    
T  41388740 catgaacatcgtataatcttcgtaggtacttctttaacaacacataggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaac 41388641  T
Q  178 tcatggatgataattcatcaacaacgactttgactcgacaaatg 221  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  41388640 tcatggatgataattcatcaacaacgaccttgactcgacaaatg 41388597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 85 - 218
Target Start/End: Original strand, 33796911 - 33797044
Alignment:
Q  85 atcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatgga 184  Q
    |||||||||||||||||||||||||||||| |||| ||| || ||| |||||||   |||||||||||||||||| || |||||||||||||||||||||    
T  33796911 atcgtataatcttcataggtacttctttaataacacatgggtggaagacaactcgacaactcatagatgataatttatcaacaacttaacaactcatgga 33797010  T
Q  185 tgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||||||||||||||||||||||||||||||    
T  33797011 tgataattcatcaacaacgactttgactcgacaa 33797044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 39244641 - 39244496
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||  |||||| |||||||    ||||||||||||||||||||  ||||||||||||    
T  39244641 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtagaagacaactcgacgactcatagatgataattcatcgacaacttaacaa 39244542  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  39244541 ctcatggatgataattcatcaacaacgaccttgactcgacaaatgc 39244496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 39248196 - 39248051
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||  |||||| |||||||    ||||||||||||||||||||  ||||||||||||    
T  39248196 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtagaagacaactcgacgactcatagatgataattcatcgacaacttaacaa 39248097  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  39248096 ctcatggatgataattcatcaacaacgaccttgactcgacaaatgc 39248051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 82 - 222
Target Start/End: Complemental strand, 16376176 - 16376035
Alignment:
Q  82 aacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactca 180  Q
    ||||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  ||||||||||||||||    
T  16376176 aacatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactca 16376077  T
Q  181 tggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  16376076 tggatgataattcatcaacaacgaccttgactcgacatatgc 16376035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 20229729 - 20229584
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||  |  ||| |||||||   |||||||||||||||||||||  ||||||||||||    
T  20229729 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggcggaagacaactcgacaactcatagatgataattcatcgacaacttaacaa 20229630  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  20229629 ctcatggatgataattcatcaacaacgaccttgactcgacaaatgc 20229584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 21406740 - 21406885
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||  |||||| |||||||   | |||||||||||||||||||  ||||||||||||    
T  21406740 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtagaagacaactcgacagctcatagatgataattcatcgacaacttaacaa 21406839  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| || |||||||||||||    
T  21406840 ctcatggatgataattcatcaacaacgaccttaactcgacaaatgc 21406885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 1010112 - 1010252
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  1010112 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 1010211  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  1010212 ggatgataattcatcaacaacgaccttgactcgacatatgc 1010252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 52638930 - 52639070
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  52638930 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 52639029  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  52639030 ggatgataattcatcaacaacgacattgactcgacatatgc 52639070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 23967332 - 23967483
Alignment:
Q  71 acaacgtcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagt--------aactcatagatgataattcat 162  Q
    ||||| |||| |||||||||||||||||||| ||||||| ||||||||| ||  |||||| ||||||||          ||||||| ||||| ||||||     
T  23967332 acaacatcataaacatcgtataatcttcataagtacttcattaacaacacatatgtagaagacaactcaactacttaacaactcatggatgacaattcag 23967431  T
Q  163 taacaacttaacaactcatggatgataattcatcaacaacgactttgactcg 214  Q
     |||||||||||||||||||||||| || |||||||||||||||||||||||    
T  23967432 caacaacttaacaactcatggatgacaactcatcaacaacgactttgactcg 23967483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 42911818 - 42911894
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  42911818 aactcatggatgacaattcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 42911894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 14238775 - 14238695
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatg----ataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    ||||||||||||||||||||||||||||||||    
T  14238775 aactcatggatgataattcatcaacaacttaacaactcatggatgatatataattcatcaacaacgactttgactcgacaa 14238695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 19675542 - 19675596
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  19675542 aacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 19675596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 48519948 - 48520018
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgact 212  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||||| || ||||||||||| |||||||||    
T  48519948 aactcatggatgacaattcatcaacaacttaacaactcatggatgacaactcatcaacaacaactttgact 48520018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 20241618 - 20241672
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||||||||||||||||| || || |||||||||||||||||||||||||||    
T  20241618 aacaacttaacaactcatggacgacaactcatcaacaacgactttgactcgacaa 20241672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 14238786 - 14238748
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14238786 aacaacttaacaactcatggatgataattcatcaacaac 14238748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 42911807 - 42911845
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  42911807 aacaacttaacaactcatggatgacaattcatcaacaac 42911845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 48519682 - 48519720
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacatagcaa 52  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  48519682 ataacaacatcataatcaatatcataaacaacatagcaa 48519720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 4597201 - 4597165
Alignment:
Q  12 atataacaacatcagaatcaatatcataaacaacata 48  Q
    |||||||||||||| ||||||||||||||||||||||    
T  4597201 atataacaacatcataatcaatatcataaacaacata 4597165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 48519915 - 48519975
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaac 202  Q
    ||||||| ||||| || || | |||||| ||||||||||||||||| ||||||||||||||    
T  48519915 aactcatggatgacaactcgtcaacaacctaacaactcatggatgacaattcatcaacaac 48519975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 48519786 - 48519820
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacata 48  Q
    |||||||||||| ||||||||||||||||||||||    
T  48519786 ataacaacatcataatcaatatcataaacaacata 48519820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 42911721 - 42911754
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  42911721 ataacaacatcataatcaatatcataaacaacat 42911754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 48519818 - 48519851
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  48519818 ataacaacatcataatcaatatcataaacaacat 48519851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 51274867 - 51274834
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  51274867 ataacaacatcataatcaatatcataaacaacat 51274834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 226
Target Start/End: Complemental strand, 8373 - 8163
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacatagcaatcgtcataagcaactttgacaacgtcatgaacatcgtataatcttcataggtacttcttta 113  Q
    |||| ||||||| |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8373 ataataacatcataatcaatatcataaacaacatagcaa-catcataagcaactt-gacaacgtcatgaacatcgtataatcttcataggtacttcttta 8276  T
Q  114 acaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactc 213  Q
    |||||| ||| |||||| |||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8275 acaacacatgggtagaagacaacttagcaactcaaagatgataattcattaacaacttaacaactcatggatgataattcatcaacaatgactttgactc 8176  T
Q  214 gacaaatgcaaca 226  Q
    |||||||||||||    
T  8175 gacaaatgcaaca 8163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 222
Target Start/End: Complemental strand, 44385430 - 44385223
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacatagcaatcgtcataagcaactttgacaacgtcatgaacatcgtataatcttcataggtacttc-ttt 112  Q
    |||| ||||||| |||||||||||||||||||||| ||| | ||||||||||||| |||||| ||||||||||||||||||||||||||||||| | |||    
T  44385430 ataaaaacatcataatcaatatcataaacaacataacaa-catcataagcaactt-gacaacatcatgaacatcgtataatcttcataggtactcccttt 44385333  T
Q  113 aacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgact 212  Q
    || |||| ||| |||||| ||||||||  ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  44385332 aataacacatgggtagaagacaactcaacaacacatagatgataattcattaacaacttaacaactcatgaatgataattcatcaacaacgactttgact 44385233  T
Q  213 cgacaaatgc 222  Q
     |||||||||    
T  44385232 tgacaaatgc 44385223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 21828761 - 21828616
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||    
T  21828761 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaa 21828662  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  21828661 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 21828616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 82 - 222
Target Start/End: Complemental strand, 18863387 - 18863247
Alignment:
Q  82 aacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  |||||||||||||||||    
T  18863387 aacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaactcat 18863288  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18863287 ggatgataattcatcaacaacgactttgactcgacaaatgc 18863247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 30940818 - 30940679
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatg 182  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||||||||    
T  30940818 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaactcatg 30940719  T
Q  183 gatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30940718 gatgataattcatcaacaacgactttgactcgacaaatgc 30940679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 23913655 - 23913800
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||| | ||||||||||||||||||||||||||||| ||| |||||| |||| | |  ||||||||||||||||||||| |||||||||||||    
T  23913655 tcataaacatcatgtaatcttcataggtacttctttaacaacacatgggtagaagacaaattaacaactcatagatgataattcatcaacaacttaacaa 23913754  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  23913755 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 23913800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 21386717 - 21386862
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||| ||| ||||||||||||||||| ||| |||||| |||||||   |||||| ||||||||||| || |||||||||||||    
T  21386717 tcataaacatcgtataatctttataagtacttctttaacaacacatgggtagaagacaactcgacaactcaaagatgataatttatcaacaacttaacaa 21386816  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  21386817 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 21386862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 14398568 - 14398425
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| |||||||   ||||||  ||||||||||||| |||||||||||||    
T  14398568 tcataaacatcgtataatcttcatatgtacttctttaacaacacatgggtagaaaacaactcgacaactca--gatgataattcatcaacaacttaacaa 14398471  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
     |||||||||||||||||||||||||||||||||||||||||||||    
T  14398470 ttcatggatgataattcatcaacaacgactttgactcgacaaatgc 14398425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 21410309 - 21410454
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||| ||||||| ||||||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||| ||||  ||||||||||||    
T  21410309 tcataaacatcatataatcgtcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataaatcatcgacaacttaacaa 21410408  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  21410409 ctcatggatgataattcatcaacaacgaccttgactcgacaaatgc 21410454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 21804801 - 21804946
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||| ||||||| ||||||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||| ||||  ||||||||||||    
T  21804801 tcataaacatcatataatcgtcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataaatcatcgacaacttaacaa 21804900  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  21804901 ctcatggatgataattcatcaacaacgaccttgactcgacaaatgc 21804946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 21973298 - 21973158
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  21973298 acatcgtataatcttcataggtacttcttcaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 21973199  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  21973198 ggatgataattcatcaacaacgaccttgactcgacatatgc 21973158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 21977389 - 21977249
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  21977389 acatcgtataatcttcataggtacttcttcaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 21977290  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  21977289 ggatgataattcatcaacaacgaccttgactcgacatatgc 21977249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 22111320 - 22111460
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| | ||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  22111320 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacataactcgacaaactcatggatgataattcatcgacaacttaacaactcat 22111419  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  22111420 ggatgataattcatcaacaacgaccttgactcgacatatgc 22111460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 43251200 - 43251340
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  43251200 acatcgtacaatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 43251299  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  43251300 ggatgataattcatcaacaacgaccttgactcgacatatgc 43251340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 16413882 - 16413760
Alignment:
Q  96 ttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataattcat 195  Q
    |||||| ||||||| ||||| ||| |||  ||||| |||||| |  ||||||| ||||||||||||| |||||||||| |||||||| ||||||||||||    
T  16413882 ttcataagtacttcattaactacacatggatagaagacaacttaacaactcatggatgataattcatcaacaacttaataactcatgtatgataattcat 16413783  T
Q  196 caacaacgactttgactcgacaa 218  Q
    |||||||||||||||||||||||    
T  16413782 caacaacgactttgactcgacaa 16413760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 32121453 - 32121529
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32121453 aactcatggatgataattcatcaacaacttaacaactcatggatgataattcctcaacaacgactttgactcgacaa 32121529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 42819183 - 42819107
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||| || |||| |||||||||||||||||||||||| || ||||||||||| |||| ||||||||||    
T  42819183 aactcatggatgacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacaacttggactcgacaa 42819107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 202
Target Start/End: Original strand, 5760107 - 5760237
Alignment:
Q  72 caacgtcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagat----gataattcattaaca 167  Q
    |||| |||| |||||||||||||||||||| | ||||| ||||||||| |||  ||||| |||||| |  ||||||| |||    ||||| |||   |||    
T  5760107 caacatcataaacatcgtataatcttcataagcacttcattaacaacacatggatagaagacaactaac-aactcatggatagaagataactca---aca 5760202  T
Q  168 acttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||| ||||||||||||||    
T  5760203 acttaacaactcatggatgacaattcatcaacaac 5760237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 18833091 - 18833161
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgact 212  Q
    ||||||| ||||| || || | |||||||||||||||||||||||| || ||||||||||| |||||||||    
T  18833091 aactcatggatgacaactcgtcaacaacttaacaactcatggatgacaactcatcaacaacaactttgact 18833161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 32121442 - 32121480
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32121442 aacaacttaacaactcatggatgataattcatcaacaac 32121480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 19930034 - 19929978
Alignment:
Q  162 ttaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||| ||||||||||||| | || | || ||||||||||||||||||||||    
T  19930034 ttaacaacttgacaactcatggataacaacttattaacaacgactttgactcgacaa 19929978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 18832974 - 18833020
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacatagcaatcgtcataa 61  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  18832974 ataacaacatcataatcaatatcataaacaacataacaa-cgtcataa 18833020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 37515200 - 37515238
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  37515200 aacaacttaacaactcatgaatgacaattcatcaacaac 37515238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 42819194 - 42819156
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||| || |||||||||||    
T  42819194 aacaacttaacaactcatggatgacaactcatcaacaac 42819156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 42819280 - 42819247
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  42819280 ataacaacatcataatcaatatcataaacaacat 42819247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 21828830 - 21828790
Alignment:
Q  12 atataacaacatcagaatcaatatcataaacaacatagcaa 52  Q
    ||||||||| |||| |||||||||| |||||||||||||||    
T  21828830 atataacaatatcataatcaatatcttaaacaacatagcaa 21828790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 30940964 - 30940924
Alignment:
Q  12 atataacaacatcagaatcaatatcataaacaacatagcaa 52  Q
    ||||||||| |||| |||||||||| |||||||||||||||    
T  30940964 atataacaatatcataatcaatatcttaaacaacatagcaa 30940924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 6613 - 6468
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||||  ||||||||||||||||||||| |||||||||||||    
T  6613 tcataaacatcatataatcttcataggtacttctttaacaacacatgggtagaagacaactcaacaactcatagatgataattcatcaacaacttaacaa 6514  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6513 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 6468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 36833 - 36688
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||||  ||||||||||||||||||||| |||||||||||||    
T  36833 tcataaacatcatataatcttcataggtacttctttaacaacacatgggtagaagacaactcaacaactcatagatgataattcatcaacaacttaacaa 36734  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  36733 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 36688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 1e-55; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 22074708 - 22074563
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| | |||||   ||||||||||||||||||||| |||||||||||||    
T  22074708 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagataactcgacaactcatagatgataattcatcaacaacttaacaa 22074609  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  22074608 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 22074563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 23414289 - 23414434
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||    
T  23414289 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaa 23414388  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  23414389 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 23414434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 92 - 222
Target Start/End: Original strand, 2076871 - 2077001
Alignment:
Q  92 aatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataat 191  Q
    |||||||||||||||||||||||||||| ||| |||||| ||||||||  |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  2076871 aatcttcataggtacttctttaacaacacatgggtagaagacaactcaacaactcatagatgataattcatcgacaacttaacaactcatggatgataat 2076970  T
Q  192 tcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||||||||||    
T  2076971 tcatcaacaacgactttgactcgacaaatgc 2077001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 1643894 - 1644039
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||  || ||| |||||||   |||||||||||||||||||||  ||||||||||||    
T  1643894 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtggaagacaactcgacaactcatagatgataattcatcgacaacttaacaa 1643993  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  1643994 ctcatggatgataattcatcaacaacgaccttgactcgacaaatgc 1644039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 31478706 - 31478561
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||||||| || ||||||||||||||||| ||  |||||| |||||||   |||||||||||||||||||||  ||||||||||||    
T  31478706 tcataaacatcgtataatcttcgtatgtacttctttaacaacacataggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaa 31478607  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  31478606 ctcatggatgataattcatcaacaacgaccttgactcgacaaatgc 31478561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 11566251 - 11566391
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  11566251 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 11566350  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  11566351 ggatgataattcatcaacaacgaccttgactcgacatatgc 11566391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 12619559 - 12619419
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  12619559 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 12619460  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  12619459 ggatgataattcatcaacaacgaccttgactcgacatatgc 12619419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 22862335 - 22862475
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  22862335 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 22862434  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  22862435 ggatgataattcatcaacaacgaccttgactcgacatatgc 22862475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 23394457 - 23394597
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  23394457 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 23394556  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  23394557 ggatgataattcatcaacaacgaccttgactcgacatatgc 23394597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 14471603 - 14471742
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatg 182  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||    |||||| |||||||||||||  |||||||||||||||||     
T  14471603 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacgactcatggatgataattcatcgacaacttaacaactcata 14471702  T
Q  183 gatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  14471703 gatgatagttcatcaacaacgactttgactcgacaaatgc 14471742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 16623738 - 16623883
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||| ||| ||||||||| |||||||||| ||  |||||| |||||||    ||||||||||||||||||||  ||||||||||||    
T  16623738 tcataaacatcgtataattttcgtaggtacttttttaacaacacataggtagaagacaactcgacgactcatagatgataattcatcgacaacttaacaa 16623837  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  16623838 ctcatggatgataattcatcaacaacgaccttgactcgacaaatgc 16623883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 8243222 - 8243362
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  8243222 acatcgtaaaatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 8243321  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  8243322 ggatgataattcatcaacaacgaccttgactcgacatatgc 8243362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 23989309 - 23989449
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    ||||||||||||||||  ||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  23989309 acatcgtataatcttcgcaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 23989408  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  23989409 ggatgataattcatcaacaacgaccttgactcgacatatgc 23989449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 19869978 - 19870119
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagt-agaatacaactc-agtaactcatagatgataattcattaacaacttaacaactca 180  Q
    |||||||||||||||| |||||||||||||||||||| ||| || | || | ||||| |  ||||||| |||||||||||||  |||||||||||||||     
T  19869978 acatcgtataatcttcgtaggtacttctttaacaacacatgggttataacataactcgacaaactcatggatgataattcatcgacaacttaacaactcg 19870077  T
Q  181 tggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  19870078 tggatgataattcatcaacaacgaccttgactcgacatatgc 19870119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 202
Target Start/End: Original strand, 16759626 - 16759746
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||| ||    
T  16759626 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactaat 16759725  T
Q  182 ggatgataattcatcaacaac 202  Q
    ||||||||||||||| |||||    
T  16759726 ggatgataattcatcgacaac 16759746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 222
Target Start/End: Original strand, 27556065 - 27556192
Alignment:
Q  82 aacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   ||||||||||||||||||||| | ||||||||||          
T  27556065 aacatcgtataatcttcataggtacttctttaacaacacatgggtagaaaacaactcgacaactcatagatgataattcatcatcaacttaaca------ 27556158  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
           ||||||||||||||||||||||||||||||||||    
T  27556159 -------aattcatcaacaacgactttgactcgacaaatgc 27556192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 22948506 - 22948592
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaac 169  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   ||||||||||||||||||||| ||||||    
T  22948506 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcaacaac 22948592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 22952462 - 22952548
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaac 169  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   ||||||||||||||||||||| ||||||    
T  22952462 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcaacaac 22952548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 23870950 - 23871036
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaac 169  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   ||||||||||||||||||||| ||||||    
T  23870950 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcaacaac 23871036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 23874906 - 23874992
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaac 169  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   ||||||||||||||||||||| ||||||    
T  23874906 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcaacaac 23874992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 34963069 - 34963123
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34963069 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 34963123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 218
Target Start/End: Original strand, 22805370 - 22805507
Alignment:
Q  89 tataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaact--------catagatgataattcattaacaacttaacaactca 180  Q
    ||||||||||||| | ||||| ||||||||| ||| |||||| ||||||||  ||||        ||| ||||| || |||| |||||||||||||||||    
T  22805370 tataatcttcataagcacttcattaacaacacatgggtagaagacaactcaacaacttaacgactcatggatgacaactcatcaacaacttaacaactca 22805469  T
Q  181 tggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| || |||||||||||||||||||||||||||    
T  22805470 tggatgacaactcatcaacaacgactttgactcgacaa 22805507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 218
Target Start/End: Complemental strand, 19774204 - 19774060
Alignment:
Q  82 aacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaact--------catagatgataattcattaacaacttaa 173  Q
    |||||| ||||||||||||| | ||||| ||||||||| ||| |||||| ||||||||  ||||        ||| ||||| || || | ||||||||||    
T  19774204 aacatcatataatcttcataagcacttcattaacaacacatgggtagaagacaactcaacaacttaacaactcatggatgacaactcgtcaacaacttaa 19774105  T
Q  174 caactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||||| || |||||||||||||||||||||||||||    
T  19774104 caactcatggatgacaagtcatcaacaacgactttgactcgacaa 19774060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 23538235 - 23538302
Alignment:
Q  151 atgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||| |||||    
T  23538235 atgataattcatcaacaacttaacaactcttggatgataattcatcaacaacgaatttgactagacaa 23538302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 23992126 - 23992180
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23992126 aacaacttaacaactcatggatgataattcatcaacaacgactttgaatcgacaa 23992180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 17105354 - 17105407
Alignment:
Q  165 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17105354 acaacttaacaactcatggatgacaattcatcaacaacgactttgactcgacaa 17105407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 17742851 - 17742923
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcg 214  Q
    ||||||| ||||  ||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||    
T  17742851 aactcatggatgtcaattcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcg 17742923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 19656697 - 19656621
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||| ||||||| | |||||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  19656697 aactcatggatgagaattcatcatcaacttaacaactcatggatgacaactcatcgacaacgactttgactcgacaa 19656621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 27126665 - 27126606
Alignment:
Q  159 tcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  27126665 tcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 27126606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 15706011 - 15705936
Alignment:
Q  143 actcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||| ||||| || |||| |||||||||||||||||||||||| || ||||||||||||| ||||||| |||||    
T  15706011 actcatggatgacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgaatttgacttgacaa 15705936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 18918092 - 18918013
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcat 162  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||  | || ||| |||||||||||||    
T  18918092 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgatcacccatggatgataattcat 18918013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 27416557 - 27416503
Alignment:
Q  168 acttaacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  27416557 acttaacaactcatagatgataattcatcaacaacgacttcgactcgacagatgc 27416503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 16759727 - 16759784
Alignment:
Q  150 gatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactt 207  Q
    |||||||||||||  ||||||||||| || ||||||||||||||||||||||||||||    
T  16759727 gatgataattcatcgacaacttaacagctaatggatgataattcatcaacaacgactt 16759784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 22948563 - 22948612
Alignment:
Q  173 acaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  22948563 acaactcatagatgataattcatcaacaacgaccttgactcgacaaatgc 22948612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 22952519 - 22952568
Alignment:
Q  173 acaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  22952519 acaactcatagatgataattcatcaacaacgaccttgactcgacaaatgc 22952568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 23871007 - 23871056
Alignment:
Q  173 acaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  23871007 acaactcatagatgataattcatcaacaacgaccttgactcgacaaatgc 23871056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 23874963 - 23875012
Alignment:
Q  173 acaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  23874963 acaactcatagatgataattcatcaacaacgaccttgactcgacaaatgc 23875012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 7825435 - 7825489
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||||||| ||||||| || ||||||||||||||||||| |||||||    
T  7825435 aacaacttaacaactcgtggatgacaactcatcaacaacgactttgattcgacaa 7825489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 202
Target Start/End: Complemental strand, 19656888 - 19656762
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattca--ttaacaacttaac 174  Q
    |||| |||||||||||||||||||| | ||||| ||||||||| ||   ||||| ||||||||  ||||||| ||| | ||  ||  | ||||||||| |    
T  19656888 tcataaacatcgtataatcttcataagcacttcattaacaacacatagatagaagacaactcaacaactcatggat-agaagacaactcaacaacttagc 19656790  T
Q  175 aactcatggatgataattcatcaacaac 202  Q
    ||||||||||||| ||||||||||||||    
T  19656789 aactcatggatgacaattcatcaacaac 19656762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 15706044 - 15705985
Alignment:
Q  143 actcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||| || |||| ||||||||||| |||||||||||| || |||||||||||    
T  15706044 actcatagatgacaactcatcaacaacttaaccactcatggatgacaactcatcaacaac 15705985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 18918029 - 18917986
Alignment:
Q  179 catggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||    
T  18918029 catggatgataattcatcaccaacgactttgactcaacaaatgc 18917986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 17742613 - 17742665
Alignment:
Q  13 tataacaacatcagaatcaatatcataaacaacatagcaatcgtcataagcaac 66  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||||||| ||||    
T  17742613 tataacaacatcataatcaatatcataaacaacataacaa-cgtcataatcaac 17742665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 19656799 - 19656746
Alignment:
Q  132 acaactcagtaactcatagatgataattcattaacaacttaacaactcatggat 185  Q
    |||||| || ||||||| ||||| ||||||| ||||||||||||||||||||||    
T  19656799 acaacttagcaactcatggatgacaattcatcaacaacttaacaactcatggat 19656746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 17742818 - 17742878
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaac 202  Q
    ||||||| || || ||||||| |||||||| ||||||||||||||  ||||||||||||||    
T  17742818 aactcatggaggacaattcatcaacaactttacaactcatggatgtcaattcatcaacaac 17742878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 17105121 - 17105160
Alignment:
Q  9 atcatataacaacatcagaatcaatatcataaacaacata 48  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  17105121 atcataaaacaacatcataatcaatatcataaacaacata 17105160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 17742807 - 17742845
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  17742807 aacaacttaacaactcatggaggacaattcatcaacaac 17742845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 19656733 - 19656695
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  19656733 aacaacttaacaactcatggatgacaatttatcaacaac 19656695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 23538216 - 23538253
Alignment:
Q  165 acaacttaacaactcatggatgataattcatcaacaac 202  Q
    ||||||||||||||| || |||||||||||||||||||    
T  23538216 acaacttaacaactcttgaatgataattcatcaacaac 23538253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 20182380 - 20182440
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||  |||| |||||||  |||||| |||||||| ||||||| ||||||||||||||    
T  20182380 aactcatgtatgacaattcatcgacaactcaacaactcgtggatgacaattcatcaacaac 20182440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 22153611 - 22153551
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||  |||| |||||||  |||||| |||||||| ||||||| ||||||||||||||    
T  22153611 aactcatgtatgacaattcatcgacaactcaacaactcgtggatgacaattcatcaacaac 22153551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 4e-53; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 11230505 - 11230650
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||    
T  11230505 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaa 11230604  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  11230605 ctcatggatgataattcatcaacaacgaccttgactcgacaaatgc 11230650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 222
Target Start/End: Original strand, 18355609 - 18355746
Alignment:
Q  85 atcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatgga 184  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   ||||||||||||||||||||| |||||||||||||||||||||    
T  18355609 atcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcaacaacttaacaactcatgga 18355708  T
Q  185 tgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  18355709 tgataattcatcaacaacgacttcgactcgacaaatgc 18355746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 11220107 - 11220252
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||||||||||| |||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||    
T  11220107 tcataaacatcgtataatcttcatagctacttctttaacaacacatgggtagaagacaactcgtcaactcatagatgataattcatcgacaacttaacaa 11220206  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  11220207 ctcatggatgataattcatcaacaacgaccttgactcgacaaatgc 11220252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 11224693 - 11224838
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||    
T  11224693 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaa 11224792  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
     |||||||||||||||||||||||||||| ||||||||||||||||    
T  11224793 atcatggatgataattcatcaacaacgaccttgactcgacaaatgc 11224838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 11228516 - 11228661
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||    
T  11228516 tcataaacatcgtataatcttcctaggtacttctttaacaacacatgggtagaagacaactcgtcaactcatagatgataattcatcgacaacttaacaa 11228615  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  11228616 ctcatggatgataattcatcaacaacgaccttgactcgacaaatgc 11228661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 40724332 - 40724193
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatg 182  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   ||||||| |||||||||||||  ||||||||||||||||||    
T  40724332 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaactcatggatgataattcatcgacaacttaacaactcatg 40724233  T
Q  183 gatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  40724232 gatgataattcatcaacaacgactttgacttgacagatgc 40724193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 82 - 222
Target Start/End: Original strand, 20295235 - 20295376
Alignment:
Q  82 aacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactca 180  Q
    ||||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  ||||||||||||||||    
T  20295235 aacatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactca 20295334  T
Q  181 tggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  20295335 tggatgataattcatcaacaacgaccttgactcgacatatgc 20295376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 10752576 - 10752719
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||||||| || ||||||||||||||||||||  |||||| |||||||   ||||||  |||||||||||||  ||||||||||||    
T  10752576 tcataaacatcgtataatcttcgtatgtacttctttaacaacatataggtagaagacaactcgacaactca--gatgataattcatcgacaacttaacaa 10752673  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  10752674 ctcatggatgataattcatcaacaacgaccttgactcgacaaatgc 10752719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 15237556 - 15237412
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||  |||||| |||||||    ||||||||||||||||||||  ||||||||||||    
T  15237556 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtagaagacaactcgacgactcatagatgataattcatcgacaacttaacaa 15237457  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||    
T  15237456 ctcatggatgataattcatc-acaacgaccttgactcgacaaatgc 15237412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 97 - 222
Target Start/End: Original strand, 11226546 - 11226671
Alignment:
Q  97 tcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataattcatc 196  Q
    |||||| |||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  11226546 tcatagctacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaactcatggatgataattcatc 11226645  T
Q  197 aacaacgactttgactcgacaaatgc 222  Q
    ||||||||  ||||||||||||||||    
T  11226646 aacaacgatcttgactcgacaaatgc 11226671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 69 - 169
Target Start/End: Complemental strand, 22108109 - 22108009
Alignment:
Q  69 tgacaacgtcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaa 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||  ||||||||||||||||||||| |||||    
T  22108109 tgacaacgtcatgaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcaacaactcatagatgataattcatcaacaa 22108010  T
Q  169 c 169  Q
    |    
T  22108009 c 22108009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 77 - 169
Target Start/End: Complemental strand, 20911623 - 20911531
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaac 169  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   |||| |||||||||||||||| ||||||    
T  20911623 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgtcaactaatagatgataattcatcaacaac 20911531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 77 - 169
Target Start/End: Complemental strand, 24767990 - 24767898
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaac 169  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   |||||| |||||||||||||| ||||||    
T  24767990 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcacagatgataattcatcaacaac 24767898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 19473401 - 19473315
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaac 169  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   ||||||||||||||||||||| ||||||    
T  19473401 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcaacaac 19473315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 22108046 - 22107989
Alignment:
Q  165 acaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22108046 acaactcaacaactcatagatgataattcatcaacaacgactttgactcgacaaatgc 22107989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 19473344 - 19473295
Alignment:
Q  173 acaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  19473344 acaactcatagatgataattcatcaacaacgaccttgactcgacaaatgc 19473295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 20911559 - 20911511
Alignment:
Q  174 caactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  20911559 caactaatagatgataattcatcaacaacgactttgactcgacaaatgc 20911511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 33896171 - 33896117
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||| ||||| |||||||||||| || |||||||||||||||||||||| ||||    
T  33896171 aacaatttaacgactcatggatgacaactcatcaacaacgactttgactcaacaa 33896117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 24767927 - 24767878
Alignment:
Q  173 acaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||  |||||||||||||||||||||||||||||||  |||||||    
T  24767927 acaactcacagatgataattcatcaacaacgactttgactcatcaaatgc 24767878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 1282772 - 1282917
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   |||| ||||||||||||||||  ||||||||||||    
T  1282772 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaacttatagatgataattcatcgacaacttaacaa 1282871  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  1282872 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 1282917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 9784394 - 9784539
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||| ||||| ||||||||||||||||||||||||| ||| |||||| | ||||||  ||||||||||||||||||||| |||||||||||||    
T  9784394 tcataaacatcatataaacttcataggtacttctttaacaacacatgggtagaagaaaactcaacaactcatagatgataattcatcaacaacttaacaa 9784493  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  9784494 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 9784539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 31344522 - 31344666
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||| | ||||||||||||    
T  31344522 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattca-tcacaacttaacaa 31344620  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  31344621 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 31344666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 41531721 - 41531582
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatg 182  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||||||||    
T  41531721 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaactcatg 41531622  T
Q  183 gatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41531621 gatgataattcatcaacaacgactttgactcgacaaatgc 41531582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 30345732 - 30345593
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatg 182  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||||||||    
T  30345732 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaactcatg 30345633  T
Q  183 gatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  30345632 gatgataattcatcaacaacgaccttgactcgacaaatgc 30345593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 24629196 - 24629056
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  24629196 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 24629097  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  24629096 ggatgataattcatcaacaacgaccttgactcgacatatgc 24629056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 27380149 - 27380009
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  27380149 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 27380050  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  27380049 ggatgataattcatcaacaacgaccttgactcgacatatgc 27380009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 27384195 - 27384055
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  27384195 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 27384096  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  27384095 ggatgataattcatcaacaacgaccttgactcgacatatgc 27384055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 27601181 - 27601321
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  27601181 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 27601280  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  27601281 ggatgataattcatcaacaacgaccttgactcgacatatgc 27601321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 10102370 - 10102230
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||| ||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  10102370 acatcgtataatcttcgtaggtacttctttaacgacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 10102271  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  10102270 ggatgataattcatcaacaacgaccttgactcgacatatgc 10102230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 24648744 - 24648884
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  24648744 acatcgtacaatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 24648843  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  24648844 ggatgataattcatcaacaacgaccttgactcgacatatgc 24648884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 125 - 222
Target Start/End: Complemental strand, 12902190 - 12902093
Alignment:
Q  125 gtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||| |||||||   |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12902190 gtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaaatgc 12902093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 32215472 - 32215396
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32215472 aactcatggatgataattcatcaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 32215396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 17306255 - 17306331
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||| || |||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  17306255 aactcatggatgacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 17306331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 38967084 - 38967135
Alignment:
Q  171 taacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38967084 taacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 38967135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 24367446 - 24367497
Alignment:
Q  171 taacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24367446 taacaactcatgaatgataattcatcaacaacgactttgactcgacaaatgc 24367497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 28653764 - 28653710
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  28653764 aacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 28653710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 24514976 - 24515029
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgaca 217  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  24514976 aacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgaca 24515029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 36838972 - 36839042
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgact 212  Q
    |||||||  |||| || |||| |||||||||||||||||||||||| || |||||||||||||||||||||    
T  36838972 aactcatgaatgacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgact 36839042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 32215483 - 32215445
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32215483 aacaacttaacaactcatggatgataattcatcaacaac 32215445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 357648 - 357694
Alignment:
Q  6 aacatcatataacaacatcagaatcaatatcataaacaacatagcaa 52  Q
    |||||||| | | ||||||| ||||||||||||||||||||||||||    
T  357648 aacatcatcttataacatcataatcaatatcataaacaacatagcaa 357694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 17306244 - 17306282
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||| || |||||||||||    
T  17306244 aacaacttaacaactcatggatgacaactcatcaacaac 17306282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 7672782 - 7672749
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  7672782 ataacaacatcataatcaatatcataaacaacat 7672749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 17306158 - 17306191
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  17306158 ataacaacatcataatcaatatcataaacaacat 17306191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 24866102 - 24866069
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  24866102 ataacaacatcataatcaatatcataaacaacat 24866069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 28653850 - 28653817
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  28653850 ataacaacatcataatcaatatcataaacaacat 28653817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 36838875 - 36838908
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  36838875 ataacaacatcataatcaatatcataaacaacat 36838908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 1282703 - 1282743
Alignment:
Q  12 atataacaacatcagaatcaatatcataaacaacatagcaa 52  Q
    ||||||||| |||| |||||||||| |||||||||||||||    
T  1282703 atataacaatatcataatcaatatcttaaacaacatagcaa 1282743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 14828 - 14689
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatg 182  Q
    |||||||| |||||||||||||||||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||  ||||||||||||||||||    
T  14828 acatcgtaaaatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaactcatg 14729  T
Q  183 gatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14728 gatgataattcatcaacaacgactttgactcgacaaatgc 14689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 14974 - 14934
Alignment:
Q  12 atataacaacatcagaatcaatatcataaacaacatagcaa 52  Q
    ||||||||| |||| |||||||||| |||||||||||||||    
T  14974 atataacaatatcataatcaatatcttaaacaacatagcaa 14934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 222
Target Start/End: Complemental strand, 208327 - 208190
Alignment:
Q  85 atcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatgga 184  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||| |||| ||   ||||||||||||||||||||| |||||||||||||||||||||    
T  208327 atcgtataatcttcataggtacttctttaacaacacatgggtagaagacaagtcgacaactcatagatgataattcatcaacaacttaacaactcatgga 208228  T
Q  185 tgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||||||| |||||||||    
T  208227 tgataattcatcaacaacgactttgacttgacaaatgc 208190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 222
Target Start/End: Complemental strand, 190116 - 189979
Alignment:
Q  85 atcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatgga 184  Q
    ||||||||||||||||||||||||||||||||||| ||| | |||| |||||||   ||||||||||||||||||||| |||||||||||||||||||||    
T  190116 atcgtataatcttcataggtacttctttaacaacacatgggaagaagacaactcgacaactcatagatgataattcatcaacaacttaacaactcatgga 190017  T
Q  185 tgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    | ||||||||||||||||||||||||||||||||||||    
T  190016 ttataattcatcaacaacgactttgactcgacaaatgc 189979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 56 - 198
Target Start/End: Complemental strand, 8231 - 8090
Alignment:
Q  56 tcataagcaactttgacaacgtcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgat 155  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||  |||||||||||||     
T  8231 tcataagcaactta-acaacgtcatgaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcaacaactcatagatgac 8133  T
Q  156 aattcattaacaacttaacaactcatggatgataattcatcaa 198  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  8132 aattcatcgacaacttaacaactcatggatgataattcatcaa 8090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 8113 - 8037
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8113 aactcatggatgataattcatcaaaaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 8037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 82 - 222
Target Start/End: Complemental strand, 234 - 93
Alignment:
Q  82 aacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactca 180  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  ||||||||||||||||    
T  234 aacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaaactcatggatgataattcatcgacaacttaacaactca 135  T
Q  181 tggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  134 tggatgataattcatcaacaacgaccttgactcgacaaatgc 93  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 11354 - 11499
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| |||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||   ||||| ||||||||||||||| |||||||||||||    
T  11354 tcataaacatcgtataatcttcataggtacttctttaacaagacatgggtagaagacaactcgacaactcgtagatgataattcatcaacaacttaacaa 11453  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||    
T  11454 ctcatggatgataattcatcaacaatgactttgactcaacaaatgc 11499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 98; Significance: 2e-48; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 36711 - 36566
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaa 176  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||  |||||| |||||||   |||||||||||||||||||||  ||||||||||||    
T  36711 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaa 36612  T
Q  177 ctcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  36611 ctcatggatgataattcatcaacaacgaccttgactcgacaaatgc 36566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 1135 - 1063
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcg 214  Q
    ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1135 aactcatggatggtaattcatcaacaacttaacaactcatggatgataattcatcaacaacgacattgactcg 1063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 1146 - 1108
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  1146 aacaacttaacaactcatggatggtaattcatcaacaac 1108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 82 - 222
Target Start/End: Complemental strand, 74036 - 73896
Alignment:
Q  82 aacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    ||||||||||||||||||||||||||||||||||||||  |  |||||| |||||||   ||||| ||||||||||||||| ||||||| ||||||||||    
T  74036 aacatcgtataatcttcataggtacttctttaacaacacttaggtagaagacaactcgacaactcttagatgataattcatcaacaactgaacaactcat 73937  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  73936 ggatgataattcatcaacaacgactttgactcgacaaatgc 73896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 74 - 222
Target Start/End: Complemental strand, 20933 - 20781
Alignment:
Q  74 acgtcatgaacatcgtataatcttcataggtacttcttt--aacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaa--c 169  Q
    ||||||| |||||| ||||||||||||||||||||||||  ||||||| ||| |||||| ||||||||  ||||||||||||||||||||| || ||  |    
T  20933 acgtcataaacatcatataatcttcataggtacttctttttaacaacacatgggtagaagacaactcaacaactcatagatgataattcatcaaaaaaac 20834  T
Q  170 ttaacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20833 ttaacaactcatggatgataattcatcaacaacaactttgactcgacaaatgc 20781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 5816 - 5676
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  5816 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 5717  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  5716 ggatgataattcatcaacaacgaccttgactcgacatatgc 5676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 11811 - 11951
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  11811 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 11910  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  11911 ggatgataattcatcaacaacgaccttgactcgacatatgc 11951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 33403 - 33263
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  33403 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 33304  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  33303 ggatgataattcatcaacaacgaccttgactcgacatatgc 33263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 89; Significance: 5e-43; HSPs: 3)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 68018 - 67878
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  68018 acatcgtataatcttcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 67919  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  67918 ggatgataattcatcaacaacgaccttgactcgacatatgc 67878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 19689 - 19613
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||| || |||| ||||| ||| |||||||||||||| || |||| |||||||||||| |||||||||    
T  19689 aactcatggatgacaactcatcaacaaattagcaactcatggatgacaactcattaacaacgactttaactcgacaa 19613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 19700 - 19663
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaa 201  Q
    |||||||||||||||||||||||| || ||||||||||    
T  19700 aacaacttaacaactcatggatgacaactcatcaacaa 19663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 88; Significance: 2e-42; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 66240 - 66101
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatg 182  Q
    |||||||||||||||| ||| |||||||||||||||| ||| |||||| |||||||    |||||| |||||||||||||  ||||||||||||||||||    
T  66240 acatcgtataatcttcgtagctacttctttaacaacacatgggtagaacacaactcgacgactcatggatgataattcatcgacaacttaacaactcatg 66141  T
Q  183 gatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  66140 gatgataattcataaacaacgactttgactcgacaaatgc 66101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 62324 - 62185
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatg 182  Q
    |||||||||||||||| ||| |||||||||||||||| ||| |||||| |||||||    ||||||  ||||||||||||  ||||||||||||||||||    
T  62324 acatcgtataatcttcgtagctacttctttaacaacacatgggtagaacacaactcgacgactcatgtatgataattcatcgacaacttaacaactcatg 62225  T
Q  183 gatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  62224 gatgataattcatcaacaacgactttgaatcgacaaatgc 62185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 79925 - 80071
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaaca 175  Q
    |||| ||||||||||||||||| ||||||||||||||| |||| ||  |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||    
T  79925 tcataaacatcgtataatcttcgtaggtacttctttaataacacataggtagaagacaactcgacaaactcatggatgataattcatcgacaacttaaca 80024  T
Q  176 actcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||| |||||||||||||||||||||||||| |||||| |||| ||||    
T  80025 acttatggatgataattcatcaacaacgaccttgacttgacatatgc 80071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 59436 - 59296
Alignment:
Q  83 acatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc-agtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    ||||||||||||| || |||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||||||||||||  |||||||||||||||||    
T  59436 acatcgtataatcatcgtaggtacttctttaacaacacatgggtagaacacaactcgacaaactcatggatgataattcatcgacaacttaacaactcat 59337  T
Q  182 ggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  59336 ggatgataattcatcaacaacgaccttgactcgacatatgc 59296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 9235 - 9381
Alignment:
Q  77 tcatgaacatcgtataat-cttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaaca 175  Q
    |||| ||||||||||||| |||||||||||||||||||||||||  |  ||| || ||| |||   || || | ||||||||||||| ||||||||||||    
T  9235 tcataaacatcgtataattcttcataggtacttctttaacaacacttaggtataagacagctcgacaattcttggatgataattcatcaacaacttaaca 9334  T
Q  176 actcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  9335 actcatggatgataattcatcaacaacgactttgactcgacaaatgc 9381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 8201 - 8260
Alignment:
Q  159 tcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||| |||||||||||||||||||||||| || |||||||||||||||| ||||||||||    
T  8201 tcatcaacaacttaacaactcatggatgacaactcatcaacaacgacttagactcgacaa 8260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 125 - 222
Target Start/End: Complemental strand, 4543 - 4446
Alignment:
Q  125 gtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||| |||||||   |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4543 gtagaagacaactcgacaactcatagatgataattcatcgacaacttaacaactcatggatgataattcatcaacaacgaccttgactcgacaaatgc 4446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 69; Significance: 4e-31; HSPs: 3)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 29261 - 29341
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29261 aactcatggatgataattcatcaacaacttaacaactcatggataataattcatcaacaacgactttgactcgacaaatgc 29341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 29250 - 29288
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29250 aacaacttaacaactcatggatgataattcatcaacaac 29288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 29075 - 29108
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  29075 ataacaacatcataatcaatatcataaacaacat 29108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 12781 - 12705
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12781 aactcatggatgataatacatcaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 12705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 12792 - 12754
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  12792 aacaacttaacaactcatggatgataatacatcaacaac 12754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 7137 - 7274
Alignment:
Q  73 aacgtcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc--------agtaactcatagatgataattcatta 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | | |||| | |||||||        |  ||||||||||||| ||||||| |    
T  7137 aacgtcatgaacatcgtataatcttcataggtacttctttaacaacacaggggtagcagacaactcaacaacttaacaactcatagatgacaattcatca 7236  T
Q  165 acaacttaacaactcatggatgataattcatcaacaac 202  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  7237 acaacttgacaactcatggatgacaattcatcaacaac 7274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 7247 - 7317
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 215  Q
    ||||||| ||||| ||||||| |||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  7247 aactcatggatgacaattcatcaacaacttaac---tcatggatgataattcatcaacaacgactttgactcga 7317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 18135 - 18059
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18135 aactcatggatgataattcatcaacaacttaacaactcaaggatgataattcatcaacaacgactttgactcgacaa 18059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 18146 - 18108
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18146 aacaacttaacaactcatggatgataattcatcaacaac 18108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 28798 - 28856
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28798 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 28856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 10666 - 10738
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcg 214  Q
    ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10666 aactcatggatggtaattcatcaacaacttaacaactcatggatgataattcatcaacaacgacattgactcg 10738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 10655 - 10693
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  10655 aacaacttaacaactcatggatggtaattcatcaacaac 10693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 77 - 169
Target Start/End: Complemental strand, 10487 - 10395
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaac 169  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||   |||||| |||||||||||||| ||||||    
T  10487 tcataaacatcgtataatcttcataggtacttctttaacaacacatgggtagaagacaactcgacaactcacagatgataattcatcaacaac 10395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 10424 - 10375
Alignment:
Q  173 acaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    ||||||||  |||||||||||||||||||||||||||||||  |||||||    
T  10424 acaactcacagatgataattcatcaacaacgactttgactcatcaaatgc 10375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 54; Significance: 4e-22; HSPs: 6)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 15617 - 15544
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 215  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  15617 aactcatggatgacaattcatcaacaacttaacaactcatggatgacaattcatcaacaacgactttaactcga 15544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 15741 - 15689
Alignment:
Q  150 gatgataattcattaacaacttaacaactcatggatgataattcatcaacaac 202  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  15741 gatgacaattcatcaacaacttaacaactcatggatgacaattcatcaacaac 15689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 15650 - 15590
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaac 202  Q
    ||||||| || || ||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  15650 aactcatggacgacaattcatgaacaactaaacaactcatggatgacaattcatcaacaac 15590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 15716 - 15656
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaac 202  Q
    ||||||| ||||| ||||||| ||||||| |||||||||||||| | ||||||||||||||    
T  15716 aactcatggatgacaattcatcaacaactaaacaactcatggatcacaattcatcaacaac 15656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 15683 - 15623
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaac 202  Q
    ||||||| ||| | ||||||| ||||||||||||||||||||| || ||||||| ||||||    
T  15683 aactcatggatcacaattcatcaacaacttaacaactcatggacgacaattcatgaacaac 15623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 15774 - 15722
Alignment:
Q  150 gatgataattcattaacaacttaacaactcatggatgataattcatcaacaac 202  Q
    ||||| ||||||| |||||| |||||||||| |||||| ||||||||||||||    
T  15774 gatgacaattcatcaacaacctaacaactcacggatgacaattcatcaacaac 15722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 705 - 629
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||| || |||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  705 aactcatggatgacaactcatcaacaacttaacaactcatggatgagaactcatcaacaacgactttgactcgacaa 629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 716 - 678
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||| || |||||||||||    
T  716 aacaacttaacaactcatggatgacaactcatcaacaac 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 202
Target Start/End: Original strand, 4329 - 4449
Alignment:
Q  82 aacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactcagtaactcatagatgataattcattaacaacttaacaactcat 181  Q
    |||||| ||||||||||||| | ||||| ||||||||| ||| |||||| |||||| |   |||||| ||||| || |||| ||||||||||||||||||    
T  4329 aacatcatataatcttcataagcacttcattaacaacacatgggtagaagacaacttaacgactcatggatgacaactcatcaacaacttaacaactcat 4428  T
Q  182 ggatgataattcatcaacaac 202  Q
    |||||| || |||||||||||    
T  4429 ggatgacaactcatcaacaac 4449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 4422 - 4498
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||| || |||| |||||||||||||||||||||||| || |||||||||| || |||||||||||||    
T  4422 aactcatggatgacaactcatcaacaacttaacaactcatggatgacaactcatcaacaatgattttgactcgacaa 4498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 19346 - 19270
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||| || |||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  19346 aactcatggatgacaactcatcaacaacttaacaactcatggatgacaattcatcaacaacgattttgactcgacaa 19270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 19357 - 19319
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||| || |||||||||||    
T  19357 aacaacttaacaactcatggatgacaactcatcaacaac 19319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 13988 - 13913
Alignment:
Q  143 actcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||| ||||| || |||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  13988 actcatggatgacaactcatcaacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 13913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 63526 - 63450
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| | ||| ||||||| || ||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  63526 aactcatggttgacaattcatcaagaacttaacaactcatggatgacaattcatcaacaacgaatttgactcgacaa 63450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 10706 - 10760
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  10706 aacaacttaacaactcatggatgacaactcatcaacaacgactttgactcgacaa 10760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 70804 - 70858
Alignment:
Q  168 acttaacaactcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  70804 acttaacaactcatagatgataattcatcaacaacgacttagactcgacaaatgc 70858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 45; Significance: 9e-17; HSPs: 5)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 20086 - 20010
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||| ||||| || |||| |||||||||||||||||||||||| || |||||||||| |||||| |||||||||    
T  20086 aactcatggatgacaactcatcaacaacttaacaactcatggatgacaactcatcaacaatgactttcactcgacaa 20010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 7093 - 7134
Alignment:
Q  173 acaactcatggatgataattcatcaacaacgactttgactcg 214  Q
    ||||||||||||||| || |||||||||||||||||||||||    
T  7093 acaactcatggatgacaactcatcaacaacgactttgactcg 7134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 14212 - 14253
Alignment:
Q  173 acaactcatggatgataattcatcaacaacgactttgactcg 214  Q
    ||||||||||||||| || |||||||||||||||||||||||    
T  14212 acaactcatggatgacaactcatcaacaacgactttgactcg 14253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 20097 - 20059
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaac 202  Q
    |||||||||||||||||||||||| || |||||||||||    
T  20097 aacaacttaacaactcatggatgacaactcatcaacaac 20059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 20183 - 20150
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  20183 ataacaacatcataatcaatatcataaacaacat 20150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 904 - 832
Alignment:
Q  142 aactcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcg 214  Q
    ||||||| ||||| ||||| | || ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  904 aactcatggatgacaattcctcaataacttaacaactcatggatgacaattcatcaacaaagactttgactcg 832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 1054 - 1016
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacatagcaa 52  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  1054 ataacaacatcataatcaatatcataaacaacatagcaa 1016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 37 - 118
Alignment:
Q  143 actcatagatgataattcattaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaaatgcaac 225  Q
    |||||| ||||| || |||| |||||||||||||||||||||||| || |||| ||||||||| ||||||||| |||||||||    
T  37 actcatggatgacaactcatcaacaacttaacaactcatggatgacaactcatgaacaacgacattgactcga-aaatgcaac 118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 102359 - 102305
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  102359 aacaacttaacaactcatggatgacaactcatcaacaacgactttgacttgacaa 102305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 116619 - 116673
Alignment:
Q  164 aacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    ||||||||||| |||||||||||| || |||||||||||||||||||||||||||    
T  116619 aacaacttaacgactcatggatgacaactcatcaacaacgactttgactcgacaa 116673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 6426 - 6470
Alignment:
Q  178 tcatggatgataattcatcaacaacgactttgactcgacaaatgc 222  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  6426 tcatagatgataattcatcaacaacgactttgactcgacaaatgc 6470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 13269 - 13307
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacatagcaa 52  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13269 ataacaacatcagaatcaatatcataaacaacatagcaa 13307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 51375 - 51314
Alignment:
Q  77 tcatgaacatcgtataatcttcataggtacttctttaacaacatatgagtagaatacaactc 138  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||  |||||| |||||||    
T  51375 tcataaacatcgtataatcttcgtaggtacttctttaacaacacataggtagaagacaactc 51314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 56610 - 56666
Alignment:
Q  162 ttaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||| ||||||||||||| |||| | ||| |||||||||||||||||||||    
T  56610 ttaacaacttgacaactcatggataataacttatcgacaacgactttgactcgacaa 56666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 637 - 670
Alignment:
Q  14 ataacaacatcagaatcaatatcataaacaacat 47  Q
    |||||||||||| |||||||||||||||||||||    
T  637 ataacaacatcataatcaatatcataaacaacat 670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 15154 - 15207
Alignment:
Q  162 ttaacaacttaacaactcatggatgataattcatcaacaacgactttgactcga 215  Q
    |||||||||| ||||||||||||| | || | ||| ||||||||||||||||||    
T  15154 ttaacaacttgacaactcatggataacaacttatcgacaacgactttgactcga 15207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 20943 - 20987
Alignment:
Q  143 actcatagatgataattcattaacaacttaacaactcatggatga 187  Q
    |||||| ||||| || |||| ||||||||||||||||||||||||    
T  20943 actcatggatgacaactcatcaacaacttaacaactcatggatga 20987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 166883 - 166827
Alignment:
Q  162 ttaacaacttaacaactcatggatgataattcatcaacaacgactttgactcgacaa 218  Q
    |||||||||| ||||| ||||||| | || | ||| |||||||||||||||||||||    
T  166883 ttaacaacttgacaacgcatggataaaaacttatcgacaacgactttgactcgacaa 166827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University