View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9406_low_33 (Length: 236)
Name: NF9406_low_33
Description: NF9406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9406_low_33 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 36458734 - 36458969
Alignment:
| Q |
1 |
tagagtctggattttgaagatcacgctccacgtcaaaatctttgaaattaaattcccaaatatagctgtatgcatgatctccaggtaggttaccatttgc |
100 |
Q |
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| T |
36458734 |
tagagtctggattttgaagatcacggtccacgtcaaaatctttgaaattaaattcccaaatatagctgtatgcaacatctccaggtaggttaccatttgc |
36458833 |
T |
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| Q |
101 |
atcagtgagagtaagacctagttgaatcaacttgagattatccacgttagccttcaagaaactgtactgttctgatggatccatatggcggaggtgatac |
200 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36458834 |
atcagtgagagtaagacctagttgaatcaagttgagattatccacgttagccttcaagaaactgtactgttctgatggatccatatggcggaggtgatac |
36458933 |
T |
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| Q |
201 |
ggtatattgggatcaaagttaggtgcaacgacgaca |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
36458934 |
ggtatattgggatcaaagttaggtgcaacgacgaca |
36458969 |
T |
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