View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9406_low_7 (Length: 499)
Name: NF9406_low_7
Description: NF9406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9406_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 400 - 492
Target Start/End: Original strand, 55714562 - 55714654
Alignment:
| Q |
400 |
ttgagtatttgtgatcttcattatgtcaaattacccctccgttgtattgccatgatccacattcacagatttttgcgcactccgatctctgct |
492 |
Q |
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| T |
55714562 |
ttgagtatttgtgatcttcattatgtcaaattacccctccgttgtattgccatgatccacattcacagatttttgcgcactccgatcactgct |
55714654 |
T |
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