View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9410_low_31 (Length: 307)

Name: NF9410_low_31
Description: NF9410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9410_low_31
NF9410_low_31
[»] chr2 (43 HSPs)
chr2 (1-97)||(14955754-14955850)
chr2 (1-97)||(12553959-12554056)
chr2 (2-94)||(14416381-14416473)
chr2 (17-94)||(3465576-3465652)
chr2 (44-97)||(7677663-7677716)
chr2 (1-97)||(10236996-10237091)
chr2 (41-97)||(18056241-18056298)
chr2 (2-81)||(28871585-28871662)
chr2 (1-80)||(3309170-3309249)
chr2 (11-86)||(19598074-19598149)
chr2 (39-94)||(27865172-27865227)
chr2 (53-100)||(30923244-30923291)
chr2 (9-94)||(33759977-33760060)
chr2 (53-94)||(4903938-4903979)
chr2 (41-94)||(19062141-19062194)
chr2 (56-97)||(32448407-32448448)
chr2 (41-97)||(1415811-1415867)
chr2 (41-97)||(5427659-5427715)
chr2 (53-97)||(11189415-11189459)
chr2 (53-97)||(37876396-37876440)
chr2 (48-80)||(39569872-39569904)
chr2 (53-97)||(41328005-41328049)
chr2 (31-94)||(22538087-22538150)
chr2 (50-97)||(26025268-26025315)
chr2 (41-96)||(31788710-31788765)
chr2 (63-97)||(3725455-3725489)
chr2 (3-94)||(36175305-36175400)
chr2 (1-66)||(3460511-3460576)
chr2 (50-95)||(12236832-12236877)
chr2 (41-94)||(31193129-31193182)
chr2 (1-94)||(34128466-34128559)
chr2 (56-97)||(37994552-37994593)
chr2 (41-94)||(38445420-38445473)
chr2 (41-97)||(4041384-4041440)
chr2 (53-85)||(7640003-7640035)
chr2 (41-86)||(8809533-8809580)
chr2 (3-94)||(17151651-17151740)
chr2 (41-97)||(18763722-18763778)
chr2 (44-92)||(30399824-30399872)
chr2 (41-97)||(33923959-33924015)
chr2 (41-93)||(35220582-35220634)
chr2 (41-97)||(36942912-36942968)
chr2 (50-82)||(43711793-43711825)
[»] chr3 (36 HSPs)
chr3 (1-94)||(53508436-53508529)
chr3 (3-69)||(24175937-24176003)
chr3 (3-86)||(48199997-48200078)
chr3 (4-91)||(25460782-25460869)
chr3 (17-98)||(3085079-3085160)
chr3 (53-97)||(20464754-20464798)
chr3 (41-97)||(21313279-21313335)
chr3 (41-97)||(21533598-21533654)
chr3 (56-97)||(628713-628754)
chr3 (1-94)||(27706008-27706100)
chr3 (41-94)||(40487568-40487621)
chr3 (1-78)||(42460963-42461040)
chr3 (41-94)||(46304313-46304366)
chr3 (1-81)||(21289608-21289688)
chr3 (41-97)||(43017131-43017187)
chr3 (41-97)||(47041837-47041893)
chr3 (53-97)||(47896406-47896450)
chr3 (41-93)||(48650527-48650579)
chr3 (50-97)||(21488348-21488395)
chr3 (18-92)||(1650176-1650250)
chr3 (4-94)||(41818432-41818522)
chr3 (56-97)||(6823396-6823437)
chr3 (1-94)||(16235640-16235732)
chr3 (60-97)||(17238070-17238107)
chr3 (53-94)||(23799740-23799781)
chr3 (53-94)||(24396291-24396332)
chr3 (53-97)||(6954485-6954529)
chr3 (1-81)||(8914926-8915006)
chr3 (41-97)||(9797323-9797379)
chr3 (41-97)||(10229719-10229775)
chr3 (38-94)||(13459077-13459133)
chr3 (53-85)||(29776364-29776396)
chr3 (53-97)||(33076693-33076736)
chr3 (53-85)||(45664629-45664661)
chr3 (17-97)||(51923957-51924036)
chr3 (53-97)||(52922906-52922950)
[»] chr5 (22 HSPs)
chr5 (1-97)||(2979085-2979180)
chr5 (50-97)||(30298469-30298516)
chr5 (41-95)||(1409743-1409797)
chr5 (56-97)||(8088002-8088043)
chr5 (56-97)||(13422190-13422231)
chr5 (41-97)||(6011927-6011983)
chr5 (41-97)||(9113514-9113570)
chr5 (53-97)||(13007484-13007528)
chr5 (38-94)||(16758790-16758846)
chr5 (1-81)||(28540700-28540780)
chr5 (49-92)||(4771107-4771150)
chr5 (50-85)||(29154625-29154660)
chr5 (56-97)||(8984778-8984819)
chr5 (1-86)||(19121126-19121211)
chr5 (41-94)||(35851040-35851093)
chr5 (53-94)||(39326665-39326706)
chr5 (53-97)||(177752-177796)
chr5 (41-97)||(14726250-14726306)
chr5 (58-94)||(19100445-19100481)
chr5 (53-85)||(20187294-20187326)
chr5 (41-97)||(26825673-26825729)
chr5 (41-97)||(38007600-38007656)
[»] chr4 (45 HSPs)
chr4 (1-97)||(6154998-6155094)
chr4 (1-97)||(36161946-36162042)
chr4 (33-92)||(22305404-22305463)
chr4 (1-95)||(22038589-22038683)
chr4 (1-81)||(1621305-1621385)
chr4 (41-97)||(13634379-13634435)
chr4 (34-94)||(37465741-37465801)
chr4 (1-93)||(43853678-43853770)
chr4 (3-66)||(7393435-7393498)
chr4 (34-97)||(9048931-9048994)
chr4 (50-97)||(11876001-11876048)
chr4 (50-92)||(7008350-7008392)
chr4 (33-90)||(12199477-12199532)
chr4 (1-90)||(52060710-52060797)
chr4 (41-98)||(21686030-21686087)
chr4 (31-80)||(22806802-22806851)
chr4 (1-86)||(52933738-52933823)
chr4 (1-94)||(55228203-55228296)
chr4 (53-85)||(7242460-7242492)
chr4 (41-97)||(10258690-10258746)
chr4 (41-97)||(17949112-17949168)
chr4 (41-97)||(17952964-17953020)
chr4 (41-97)||(19853301-19853357)
chr4 (53-97)||(53811294-53811338)
chr4 (1-96)||(18936017-18936111)
chr4 (3-86)||(33332379-33332462)
chr4 (53-92)||(43157185-43157224)
chr4 (53-95)||(12493608-12493650)
chr4 (56-94)||(19896416-19896454)
chr4 (4-97)||(9714148-9714240)
chr4 (41-94)||(22611454-22611507)
chr4 (41-94)||(26633463-26633516)
chr4 (41-94)||(56040438-56040491)
chr4 (53-97)||(4142553-4142597)
chr4 (53-85)||(4622378-4622410)
chr4 (60-92)||(6973090-6973122)
chr4 (41-97)||(10496600-10496656)
chr4 (50-94)||(27360032-27360076)
chr4 (1-81)||(27652178-27652258)
chr4 (53-85)||(30416301-30416333)
chr4 (41-97)||(32766778-32766834)
chr4 (53-85)||(35338704-35338736)
chr4 (53-97)||(44596935-44596979)
chr4 (1-97)||(48350972-48351068)
chr4 (41-97)||(53444383-53444439)
[»] chr1 (29 HSPs)
chr1 (5-97)||(45789762-45789852)
chr1 (1-96)||(13075435-13075530)
chr1 (1-94)||(50616456-50616549)
chr1 (1-94)||(50624283-50624376)
chr1 (41-97)||(44915886-44915942)
chr1 (41-97)||(49504384-49504440)
chr1 (41-95)||(26535583-26535637)
chr1 (3-81)||(48750405-48750483)
chr1 (45-94)||(10776253-10776302)
chr1 (53-94)||(14872898-14872939)
chr1 (50-94)||(13221960-13222004)
chr1 (53-97)||(27456748-27456792)
chr1 (1-81)||(36775504-36775584)
chr1 (53-97)||(41081476-41081520)
chr1 (50-85)||(171531-171566)
chr1 (41-92)||(940485-940536)
chr1 (50-101)||(9341977-9342028)
chr1 (56-95)||(12635431-12635470)
chr1 (50-97)||(31837096-31837143)
chr1 (50-85)||(43504223-43504258)
chr1 (3-81)||(41994684-41994762)
chr1 (44-97)||(5984066-5984119)
chr1 (41-94)||(11462274-11462327)
chr1 (53-94)||(27579920-27579961)
chr1 (60-97)||(38520307-38520344)
chr1 (56-97)||(47133164-47133205)
chr1 (50-94)||(18649756-18649800)
chr1 (48-96)||(30032948-30032996)
chr1 (37-97)||(40163219-40163279)
[»] chr6 (19 HSPs)
chr6 (1-93)||(679324-679416)
chr6 (1-97)||(30776879-30776974)
chr6 (41-97)||(34018805-34018861)
chr6 (41-97)||(606449-606505)
chr6 (1-97)||(8102942-8103037)
chr6 (5-92)||(13546486-13546571)
chr6 (41-97)||(29319666-29319722)
chr6 (36-97)||(31851670-31851731)
chr6 (45-94)||(34185486-34185535)
chr6 (41-101)||(67786-67846)
chr6 (41-97)||(32327009-32327065)
chr6 (1-64)||(6957357-6957420)
chr6 (53-96)||(33052958-33053001)
chr6 (63-97)||(12653215-12653249)
chr6 (53-106)||(4660857-4660909)
chr6 (41-94)||(12170713-12170766)
chr6 (60-97)||(16419426-16419463)
chr6 (41-97)||(9341440-9341496)
chr6 (56-92)||(32134559-32134595)
[»] chr7 (30 HSPs)
chr7 (1-94)||(11344026-11344119)
chr7 (41-97)||(9976999-9977055)
chr7 (1-97)||(48930924-48931019)
chr7 (50-97)||(6559135-6559182)
chr7 (3-94)||(38050845-38050938)
chr7 (20-97)||(38880402-38880479)
chr7 (9-94)||(46821533-46821618)
chr7 (58-94)||(3222897-3222933)
chr7 (50-94)||(3267009-3267053)
chr7 (53-97)||(8319723-8319766)
chr7 (53-97)||(17611652-17611696)
chr7 (41-97)||(28044545-28044601)
chr7 (1-81)||(35133164-35133244)
chr7 (61-97)||(38780427-38780463)
chr7 (58-97)||(3398478-3398517)
chr7 (35-94)||(4999810-4999869)
chr7 (50-97)||(40762014-40762060)
chr7 (19-94)||(49147891-49147966)
chr7 (51-97)||(48316608-48316654)
chr7 (1-94)||(3876033-3876126)
chr7 (41-94)||(12141099-12141152)
chr7 (1-94)||(25068274-25068367)
chr7 (1-58)||(26623606-26623663)
chr7 (1-78)||(28476443-28476520)
chr7 (53-94)||(35261558-35261599)
chr7 (53-85)||(772851-772883)
chr7 (1-80)||(25255444-25255521)
chr7 (53-97)||(28407707-28407751)
chr7 (57-97)||(31235556-31235596)
chr7 (53-97)||(34899396-34899440)
[»] scaffold0603 (1 HSPs)
scaffold0603 (3-97)||(7932-8027)
[»] chr8 (31 HSPs)
chr8 (3-94)||(8868027-8868118)
chr8 (41-94)||(9637199-9637252)
chr8 (1-93)||(41060042-41060135)
chr8 (41-97)||(28086599-28086655)
chr8 (38-97)||(470934-470993)
chr8 (31-94)||(19443843-19443906)
chr8 (56-97)||(30568108-30568149)
chr8 (1-81)||(14585894-14585974)
chr8 (41-97)||(27498153-27498209)
chr8 (41-97)||(40618860-40618916)
chr8 (1-97)||(41896734-41896828)
chr8 (1-97)||(42046438-42046533)
chr8 (58-97)||(31720631-31720670)
chr8 (56-94)||(14915979-14916017)
chr8 (50-91)||(16644735-16644777)
chr8 (60-94)||(43889899-43889933)
chr8 (56-97)||(1236485-1236526)
chr8 (52-97)||(10377931-10377976)
chr8 (52-97)||(15596940-15596985)
chr8 (41-94)||(16247014-16247067)
chr8 (53-86)||(16937945-16937978)
chr8 (68-97)||(30478680-30478709)
chr8 (17-94)||(34610069-34610146)
chr8 (60-97)||(35580695-35580732)
chr8 (41-97)||(7883028-7883084)
chr8 (53-85)||(15286700-15286732)
chr8 (53-85)||(15467069-15467101)
chr8 (53-97)||(17693400-17693444)
chr8 (1-81)||(18890491-18890571)
chr8 (53-85)||(36545456-36545488)
chr8 (54-94)||(39452535-39452575)
[»] scaffold0021 (1 HSPs)
scaffold0021 (10-97)||(4370-4457)
[»] scaffold0110 (1 HSPs)
scaffold0110 (49-94)||(40805-40850)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-97)||(3823-3919)
[»] scaffold0157 (1 HSPs)
scaffold0157 (53-95)||(26827-26869)
[»] scaffold0009 (1 HSPs)
scaffold0009 (56-94)||(57881-57919)
[»] scaffold0146 (1 HSPs)
scaffold0146 (60-97)||(16092-16129)
[»] scaffold0888 (1 HSPs)
scaffold0888 (1-81)||(1472-1552)
[»] scaffold0056 (1 HSPs)
scaffold0056 (53-81)||(74593-74621)
[»] scaffold0039 (1 HSPs)
scaffold0039 (53-97)||(53190-53234)
[»] scaffold0026 (1 HSPs)
scaffold0026 (41-97)||(71659-71715)


Alignment Details
Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 14955754 - 14955850
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||| |||||| ||||||||| |||| || ||||||||||| |||||| || ||||||||||||||| ||||||||||||||||||||||||||    
T  14955754 agattcatcctttatatttttagcgatattgatcatgttattgtctcttatgtattctatcaatttaaatgaatgaatatcattttgtttttgtcaa 14955850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 12554056 - 12553959
Alignment:
Q  1 agattcaccctttacattttt-agcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||||||| ||||| |||||| | ||| |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  12554056 agattcaccctttacgttttttagcaatgttgaatatgttattgtatctgatatactctatcaatttgaatgaatgaatatcattttatttttgtcaa 12553959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 14416381 - 14416473
Alignment:
Q  2 gattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||| ||||| || ||||| || | |||||||||||||||||| || || ||||||||||| ||| ||| |||||||||||||||||||    
T  14416381 gattcaccatttacgttgttagcgatgttgaacatgttattgtatctgatgtattctatcaatttgaatgaataaatatcattttgtttttgt 14416473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 3465576 - 3465652
Alignment:
Q  17 tttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||||||| || ||||||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||| ||||    
T  3465576 tttttagcaatattgatcatgttattgtctctgatatattctatcaatttaaatgaatgaatatc-ttttgttcttgt 3465652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 7677716 - 7677663
Alignment:
Q  44 tatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  7677716 tatctgatatactctatcaatttaaaaaaatgaatatcgttttgtttttgtcaa 7677663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 10237091 - 10236996
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||| ||| |||||||| |||| || ||||||||||| ||| || || ||||||||||| ||| ||||||||||  ||||||||||||||    
T  10237091 agattcaccctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc-ctttgtttttgtcaa 10236996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 18056298 - 18056241
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatc-attttgtttttgtcaa 97  Q
    |||||| ||||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  18056298 ttgtatattatatactttatcaatttaaataaatgaatatcaattttatttttgtcaa 18056241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 28871662 - 28871585
Alignment:
Q  2 gattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatc 81  Q
    ||||||||||||| |||||||||||| | ||| |||||||||||||| || |||||  ||||||| ||| ||||||||||    
T  28871662 gattcaccctttatatttttagcaatgttgaaaatgttattgtatctgatgtactc--tcaatttgaatgaatgaatatc 28871585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 3309170 - 3309249
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatat 80  Q
    ||||||||||| ||| |||||||| |||| || ||||||||||| ||| || || ||||||||||| ||| |||||||||    
T  3309170 agattcaccctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatat 3309249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 19598074 - 19598149
Alignment:
Q  11 tttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcatttt 86  Q
    ||||| ||||| ||||| | || ||||||||| ||||||||||| ||||||||||| ||| |||| ||||||||||    
T  19598074 tttacgttttttgcaatgttgatcatgttattatatcttatatattctatcaattttaatgaatggatatcatttt 19598149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 27865172 - 27865227
Alignment:
Q  39 tattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||||| || |||||| ||||||||||||||| |||||| ||||||||||||    
T  27865172 tattgtatctaatgtactctttcaatttaaataaataaatatcgttttgtttttgt 27865227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 30923291 - 30923244
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaattt 100  Q
    |||||||||||||| ||| ||||||||||||||||||||||| |||||    
T  30923291 tactctatcaatttgaatgaatgaatatcattttgtttttgtaaattt 30923244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 33760060 - 33759977
Alignment:
Q  9 cctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||| |||||||| || | |||||||||||||||||| || |||||  || |||| ||| ||||||||| |||||||||||||    
T  33760060 cctttacgtttttagcgatgttgaacatgttattgtatctaatgtactc--tcgatttgaatgaatgaatattattttgtttttgt 33759977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 4903979 - 4903938
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  4903979 tactctatcaatttaaatgaatgaatatcgttttgtttttgt 4903938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 19062194 - 19062141
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||| ||||||||||||||||||||| |||||||||  |||| |||||||    
T  19062194 ttgtatctaatatactctatcaatttaaatgaatgaatattgttttatttttgt 19062141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 32448448 - 32448407
Alignment:
Q  56 tctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  32448448 tctatcaatttgaatgaatgaatatcattttgtttttgtcaa 32448407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 1415811 - 1415867
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || || |||||| |||| ||| ||||||||||||||||||||||||||    
T  1415811 ttgtatctgatgtaatctatcgatttgaatgaatgaatatcattttgtttttgtcaa 1415867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 5427715 - 5427659
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || ||||||||| |||| ||| |||||||||| |||||||||||||||    
T  5427715 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 5427659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 11189459 - 11189415
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||    
T  11189459 tactctatcaattaaaataaatgaatattgttttgtttttgtcaa 11189415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 37876440 - 37876396
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||||| ||| |||||||||| |||||||||||||||    
T  37876440 tactctatcaatttgaatgaatgaatatcgttttgtttttgtcaa 37876396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 39569904 - 39569872
Alignment:
Q  48 ttatatactctatcaatttaaataaatgaatat 80  Q
    |||||||||||||||||||||||||||||||||    
T  39569904 ttatatactctatcaatttaaataaatgaatat 39569872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 41328005 - 41328049
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||||| ||| |||||||||| |||||||||||||||    
T  41328005 tactctatcaatttgaatgaatgaatatcgttttgtttttgtcaa 41328049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 22538150 - 22538087
Alignment:
Q  31 gaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||||||||||||| ||||| || |||||||| ||| ||| |||||| |||| |||||||    
T  22538150 gaacatgttattgtatctgatataatccatcaatttgaatgaataaatatcgttttatttttgt 22538087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 26025315 - 26025268
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||| ||| ||||||| ||| ||||||||||||||||||||||||||    
T  26025315 atataatctctcaatttgaatgaatgaatatcattttgtttttgtcaa 26025268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 31788710 - 31788765
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtca 96  Q
    |||||||| || ||||||||| |||| ||| |||||||||| ||||||||||||||    
T  31788710 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtca 31788765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Original strand, 3725455 - 3725489
Alignment:
Q  63 atttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||| ||||||||||||||||||||||||||||||    
T  3725455 atttgaataaatgaatatcattttgtttttgtcaa 3725489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 36175400 - 36175305
Alignment:
Q  3 attcaccctttacatttttagcaatatagaacatgttatt----gtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||||||||||||||| | || | ||||||||||||    |||| | || | |||| ||||||| ||| ||||||||||||||| |||||||    
T  36175400 attcaccctttacatttttatcgatgttgaacatgttatttattgtatttgatgttctctgtcaatttgaatgaatgaatatcattttatttttgt 36175305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3460511 - 3460576
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaattt 66  Q
    ||||||||| | ||| |||||||| |||| || ||||||||||| ||| ||||| |||||||||||    
T  3460511 agattcaccttatacgtttttagcgatattgatcatgttattgtctctgatatattctatcaattt 3460576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 12236877 - 12236832
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatcattttgtttttgtc 95  Q
    ||||| ||| ||||||||||| ||||||||||||||| ||||||||    
T  12236877 atataatctctcaatttaaatgaatgaatatcattttatttttgtc 12236832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 31193182 - 31193129
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||| || ||||||||| |||| ||| |||||||||| ||||||||||||    
T  31193182 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 31193129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 34128559 - 34128466
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||||||||||||||| || |||| |||||| |||||| || | || || | || |||||| ||| ||| |||||  ||||||||||||    
T  34128559 agattcaccctttacattttttgcgatattgaacatattattggatttgatttaatttaacaatttgaatgaataaatattgttttgtttttgt 34128466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 37994552 - 37994593
Alignment:
Q  56 tctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||| ||| |||||||||| |||||||||||||||    
T  37994552 tctatcaatttgaatgaatgaatatcgttttgtttttgtcaa 37994593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 38445420 - 38445473
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||| || ||||||||| |||| ||| |||||||||| ||||||||||||    
T  38445420 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 38445473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 4041440 - 4041384
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || ||| ||||| |||| ||| ||||||||||||||| ||||||||||    
T  4041440 ttgtatctgatgtacactatcgatttgaatgaatgaatatcattttatttttgtcaa 4041384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 7640035 - 7640003
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattt 85  Q
    |||||||||||||||||| ||||||||||||||    
T  7640035 tactctatcaatttaaatgaatgaatatcattt 7640003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 8809533 - 8809580
Alignment:
Q  41 ttgtatcttatat--actctatcaatttaaataaatgaatatcatttt 86  Q
    |||||||||||||  ||||||||||||| ||| |||||||||||||||    
T  8809533 ttgtatcttatatgtactctatcaatttgaatgaatgaatatcatttt 8809580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 17151651 - 17151740
Alignment:
Q  3 attcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||||||| |||||| | || | |||||||||||||||||| || |||||  | ||||| || |||||||||| || || |||||||    
T  17151651 attcaccctttacgtttttaacgattttgaacatgttattgtatctgatgtactc--ttaatttgaacaaatgaatattatattatttttgt 17151740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 18763722 - 18763778
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || ||||||||  |||| ||| |||||||||| |||||||||||||||    
T  18763722 ttgtatctgatgtactctattgatttgaatgaatgaatatcgttttgtttttgtcaa 18763778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 30399872 - 30399824
Alignment:
Q  44 tatcttatatactctatcaatttaaataaatgaatatcattttgttttt 92  Q
    ||||| || ||||| |||||||| ||||||||||||||||||| |||||    
T  30399872 tatctgatgtactcgatcaatttgaataaatgaatatcattttattttt 30399824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 33923959 - 33924015
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || || |||||| |||| ||| |||||||||| |||||||||||||||    
T  33923959 ttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 33924015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 35220582 - 35220634
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttg 93  Q
    |||||||| || |||||||||||||| ||| ||||||| || |||||||||||    
T  35220582 ttgtatctgatgtactctatcaatttgaatgaatgaatgtcgttttgtttttg 35220634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 36942968 - 36942912
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || ||||||||  |||| ||| |||||||||| |||||||||||||||    
T  36942968 ttgtatctgatgtactctattgatttgaatgaatgaatatcgttttgtttttgtcaa 36942912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 43711793 - 43711825
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatca 82  Q
    ||||||||||||||||||||| |||||||||||    
T  43711793 atatactctatcaatttaaatgaatgaatatca 43711825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 53508436 - 53508529
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||||||||  |||||||| |||| || ||||||||||||||| || || |||||||| |||||| |||||||||||||||| ||||||    
T  53508436 agattcaccctttatgtttttagcgatattgatcatgttattgtatctgatgtattctatcaaattaaatgaatgaatatcattttgcttttgt 53508529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 24176003 - 24175937
Alignment:
Q  3 attcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaa 69  Q
    |||||||||||||||||||||| || | ||||||||||||||||||  | |||||||||||||||||    
T  24176003 attcaccctttacatttttagcgatgttgaacatgttattgtatctcttgtactctatcaatttaaa 24175937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 48199997 - 48200078
Alignment:
Q  3 attcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcatttt 86  Q
    ||||||||||||| |||||||| || | ||||||||||||||||||| | |||||  ||||||||||| |||||||||| ||||    
T  48199997 attcaccctttacgtttttagcgatgttgaacatgttattgtatcttctgtactc--tcaatttaaatgaatgaatatcgtttt 48200078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 25460869 - 25460782
Alignment:
Q  4 ttcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttt 91  Q
    ||||| |||||| |||||| || | | ||||||||||||| || | ||||| ||||||||||| ||||||||||||||||||| ||||    
T  25460869 ttcacgctttacgtttttaacattgttgaacatgttattgcatttgatatagtctatcaatttgaataaatgaatatcattttatttt 25460782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 3085160 - 3085079
Alignment:
Q  17 tttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaat 98  Q
    |||||||||||   || ||||||||||||||| |  || ||||||||||| ||| ||||||||||||||||||||| |||||    
T  3085160 tttttagcaatgatgaccatgttattgtatctgaagtattctatcaatttgaatgaatgaatatcattttgtttttctcaat 3085079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 20464798 - 20464754
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||    
T  20464798 tactctatcaatttgaatgaatgaatatcattttgtttttgtcaa 20464754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 21313279 - 21313335
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| |||||||| |||||||| ||| |||||||||| |||||||||||||||    
T  21313279 ttgtatctgatatactcaatcaatttgaatgaatgaatatcgttttgtttttgtcaa 21313335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 21533654 - 21533598
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || ||||||||| |||| ||| ||||||||||||||||||||||||||    
T  21533654 ttgtatctgatgtactctatcgatttgaatgaatgaatatcattttgtttttgtcaa 21533598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 628754 - 628713
Alignment:
Q  56 tctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  628754 tctatcaatttgaatgaatgaatatcattttgtttttgtcaa 628713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 27706100 - 27706008
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||| |||| ||| |||||||| |||| || ||||||||||| ||| || || ||||||||||| ||| ||||||||||  |||||||||||    
T  27706100 agattcgccctatacgtttttagcgatatcgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc-ctttgtttttgt 27706008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 40487568 - 40487621
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||| |||||||||||| |||| ||| |||||||||| ||||||||||||    
T  40487568 ttgtatctgatatactctatcgatttgaatgaatgaatatcgttttgtttttgt 40487621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42460963 - 42461040
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaat 78  Q
    ||||||||||||||||||| |||| |||| || ||||||||||| ||| || || ||| ||||||| ||| |||||||    
T  42460963 agattcaccctttacatttatagcgatattgatcatgttattgtctctgatgtattctgtcaatttgaatgaatgaat 42461040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 46304366 - 46304313
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||| || |||||||||||||| ||| |||||||||| ||||||||||||    
T  46304366 ttgtatctgatgtactctatcaatttgaatgaatgaatatcgttttgtttttgt 46304313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 21289688 - 21289608
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatc 81  Q
    ||||||||||| ||| |||||||| |||| || ||||||||||| ||| ||  | ||||||||||| ||| ||||||||||    
T  21289688 agattcaccctatacgtttttagcgatattgatcatgttattgtctctgatgcattctatcaatttgaatgaatgaatatc 21289608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 43017131 - 43017187
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || ||||||||| |||| ||| |||||||||| |||||||||||||||    
T  43017131 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 43017187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 47041893 - 47041837
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || || |||||| |||| ||| ||||||||||||||||||||||||||    
T  47041893 ttgtatctgatgtaatctatctatttgaatgaatgaatatcattttgtttttgtcaa 47041837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 47896406 - 47896450
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||||| ||| |||||||||| |||||||||||||||    
T  47896406 tactctatcaatttgaatcaatgaatatcgttttgtttttgtcaa 47896450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 48650579 - 48650527
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttg 93  Q
    |||||||| || ||||||||| |||| ||| ||||||||||||||||||||||    
T  48650579 ttgtatctgatgtactctatcgatttgaatgaatgaatatcattttgtttttg 48650527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 21488348 - 21488395
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||  |||| ||||||||||||||||||| ||||||||||    
T  21488348 atatactctattgatttgaataaatgaatatcattttatttttgtcaa 21488395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 1650176 - 1650250
Alignment:
Q  18 ttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgttttt 92  Q
    ||||||| |||| |||||  ||||||||| | || ||||||||||||| |||| |||||||||  ||||||||||    
T  1650176 ttttagcgatattgaacaaattattgtatatgatgtactctatcaattcaaatgaatgaatatttttttgttttt 1650250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 41818432 - 41818522
Alignment:
Q  4 ttcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||||| ||||||||| ||||  |  |||||||| | ||| || || ||||||||||| ||| |||||||||| ||||| ||||||    
T  41818432 ttcaccctttatatttttagcgatattaatgatgttattatctctgatgtattctatcaatttgaatgaatgaatatcgttttgcttttgt 41818522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 6823437 - 6823396
Alignment:
Q  56 tctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||    
T  6823437 tctatcaatttaaatgaatgaatatcattttatttgtgtcaa 6823396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 16235640 - 16235732
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||| ||||| ||| |||||||| |||| || ||| ||||||| ||| || || ||||||||||| ||| ||| ||||||| |||||||||||    
T  16235640 agatttaccctatacgtttttagcgatattgatcatattattgtctctgatgtattctatcaatttgaatgaataaatatca-tttgtttttgt 16235732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 17238070 - 17238107
Alignment:
Q  60 tcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  17238070 tcaatttgaatgaatgaatatcattttgtttttgtcaa 17238107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 23799781 - 23799740
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||||||||| ||| |||||||||| ||||||||||||    
T  23799781 tactctatcaatttgaatgaatgaatatcgttttgtttttgt 23799740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 24396332 - 24396291
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||||||||| ||| |||||||||| ||||||||||||    
T  24396332 tactctatcaatttgaattaatgaatatcgttttgtttttgt 24396291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 6954529 - 6954485
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||| |||| ||| |||||||||| |||||||||||||||    
T  6954529 tactctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 6954485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8914926 - 8915006
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatc 81  Q
    ||||||||| | ||| |||||||| |||| ||  |||||||||| ||| || || ||||||||||| ||| ||||||||||    
T  8914926 agattcaccttatacgtttttagcgatattgatgatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 8915006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 9797379 - 9797323
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || |||| |||| |||| ||| |||||||||| |||||||||||||||    
T  9797379 ttgtatctgatgtactatatcgatttgaatgaatgaatatcgttttgtttttgtcaa 9797323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 10229719 - 10229775
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||| | |||||||||||| |||| ||| |||||||||| |||| ||||||||||    
T  10229719 ttgtatttgatatactctatcgatttgaatgaatgaatatcgttttatttttgtcaa 10229775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 13459077 - 13459133
Alignment:
Q  38 ttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||||||||| || | ||||||||||||| |||||||||  ||||||| ||||    
T  13459077 ttattgtatcttatgtattttatcaatttaaattaatgaatattgttttgttcttgt 13459133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 29776396 - 29776364
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattt 85  Q
    |||||||||||||| ||||||||||||||||||    
T  29776396 tactctatcaatttgaataaatgaatatcattt 29776364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 33076693 - 33076736
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||||| ||| ||||||||||| ||||||||||||||    
T  33076693 tactctatcaatttgaatgaatgaatatca-tttgtttttgtcaa 33076736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 45664629 - 45664661
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattt 85  Q
    |||||||||||||||||| ||||||||||||||    
T  45664629 tactctatcaatttaaatgaatgaatatcattt 45664661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 51923957 - 51924036
Alignment:
Q  17 tttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| |||| || ||||||||||| ||| ||  | ||||||||||| ||| ||||||||||  ||||||||||||||    
T  51923957 tttttagcgatattgatcatgttattgtctctgatgcattctatcaatttgaatgaatgaatatc-ctttgtttttgtcaa 51924036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 52922950 - 52922906
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||| |||| ||| |||||||||| |||||||||||||||    
T  52922950 tactctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 52922906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 5e-19; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 2979180 - 2979085
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||| |||||||||||| |||| || ||||||||||| ||| || || ||||||||||| |||||||||||||| |||| ||||||||||    
T  2979180 agattcaccctatacatttttagcgatattgatcatgttattgtttctgatgtattctatcaatttgaataaatgaatatc-ttttatttttgtcaa 2979085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 30298469 - 30298516
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||| ||| || |||||||||||||||||||||||||||||||||||    
T  30298469 atatagtctctcgatttaaataaatgaatatcattttgtttttgtcaa 30298516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 1409743 - 1409797
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtc 95  Q
    |||||||| || ||||||| |||||| |||||||||||||| |||||||||||||    
T  1409743 ttgtatctgatgtactctaccaatttgaataaatgaatatcgttttgtttttgtc 1409797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 8088043 - 8088002
Alignment:
Q  56 tctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  8088043 tctatcaatttgaatgaatgaatatcattttgtttttgtcaa 8088002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 13422190 - 13422231
Alignment:
Q  56 tctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  13422190 tctatcaatttgaatgaatgaatatcattttgtttttgtcaa 13422231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 6011983 - 6011927
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || ||||||||| |||| ||| |||||||||| |||||||||||||||    
T  6011983 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 6011927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 9113570 - 9113514
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || ||||||||| |||| ||| |||||||||| |||||||||||||||    
T  9113570 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 9113514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 13007484 - 13007528
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||||| ||| |||||||||| |||||||||||||||    
T  13007484 tactctatcaatttgaatgaatgaatatcgttttgtttttgtcaa 13007528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 16758790 - 16758846
Alignment:
Q  38 ttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||| |||||||| || ||||||||||||||| || |||||||||||| |||||||    
T  16758790 ttattatatcttatgtattctatcaatttaaatgaaagaatatcattttatttttgt 16758846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 28540780 - 28540700
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatc 81  Q
    ||||||||||| ||| |||||||| |||| || ||||||||||| | | || || | ||||||||||||| ||||||||||    
T  28540780 agattcaccctatacgtttttagcgatattgatcatgttattgtctttgatgtattttatcaatttaaatgaatgaatatc 28540700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 4771107 - 4771150
Alignment:
Q  49 tatatactctatcaatttaaataaatgaatatcattttgttttt 92  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||    
T  4771107 tatatactctatcaatttgaatgaatgaatatcgttttgttttt 4771150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 85
Target Start/End: Original strand, 29154625 - 29154660
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatcattt 85  Q
    ||||||||||||||||| ||||||||||||||||||    
T  29154625 atatactctatcaatttgaataaatgaatatcattt 29154660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 8984819 - 8984778
Alignment:
Q  56 tctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||| ||| |||||||||| |||||||||||||||    
T  8984819 tctatcaatttgaatgaatgaatatcgttttgtttttgtcaa 8984778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 19121126 - 19121211
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcatttt 86  Q
    ||||||||||||||| |||| ||  || | | |||||||||||||||| || || | ||||||||| ||| ||||||||| |||||    
T  19121126 agattcaccctttacgttttcagagatgttggacatgttattgtatctgatgtagtttatcaatttgaatgaatgaatataatttt 19121211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 35851040 - 35851093
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||| ||||| |||||  |||| ||| |||||||||||||||||||||||    
T  35851040 ttgtatctgatataatctattgatttgaatgaatgaatatcattttgtttttgt 35851093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 94
Target Start/End: Original strand, 39326665 - 39326706
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||| ||||||||||||| |||||||||| ||||||||||||    
T  39326665 tactatatcaatttaaatgaatgaatatcgttttgtttttgt 39326706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 177796 - 177752
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||| |||||||| ||| ||||||||||||||| ||||||||||    
T  177796 tactccatcaatttgaatgaatgaatatcattttttttttgtcaa 177752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 14726306 - 14726250
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || || |||||| |||| ||| |||||||||| |||||||||||||||    
T  14726306 ttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 14726250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 19100481 - 19100445
Alignment:
Q  58 tatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||||||||||| |||||||||||| |||||||    
T  19100481 tatcaatttaaataaacgaatatcattttatttttgt 19100445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 20187326 - 20187294
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattt 85  Q
    |||||||| ||||||||||||||||||||||||    
T  20187326 tactctattaatttaaataaatgaatatcattt 20187294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 26825673 - 26825729
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||| | |||||||||||| |||| ||| |||||||||| |||| ||||||||||    
T  26825673 ttgtatttgatatactctatcgatttgaatgaatgaatatcgttttatttttgtcaa 26825729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 38007600 - 38007656
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || || |||||| |||| ||| |||||||||| |||||||||||||||    
T  38007600 ttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 38007656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 6155094 - 6154998
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||||||  |||||||| || | || ||| ||||||||||| || || ||||||||||| ||| ||||||||||||||||||||||||||    
T  6155094 agattcaccctttatgtttttagcgatgttgatcattttattgtatctaatgtattctatcaatttgaatgaatgaatatcattttgtttttgtcaa 6154998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 36161946 - 36162042
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| |||||| |||||| | || | || ||||||||||||| | || || ||||||||||| ||| ||||||||||||||| ||||||||||    
T  36161946 agattcactctttacgtttttaacgatgttgatcatgttattgtatttgatgtattctatcaatttgaatgaatgaatatcattttatttttgtcaa 36162042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 22305463 - 22305404
Alignment:
Q  33 acatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgttttt 92  Q
    |||||||||||||||| |  |||| ||||||||||||||||||||||||||||| |||||    
T  22305463 acatgttattgtatctaacgtactatatcaatttaaataaatgaatatcattttattttt 22305404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 22038683 - 22038589
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtc 95  Q
    ||||| ||||||||| |||||||| || || | ||||||||||||| | || || ||||||||||||||| |  ||||||| |||||||||||||    
T  22038683 agatttaccctttacgtttttagcgatgtatatcatgttattgtatttgatgtattctatcaatttaaattacggaatatcgttttgtttttgtc 22038589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 1621385 - 1621305
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatc 81  Q
    ||||||||||| ||| ||||||||||||| || ||||||||||| ||| || || ||||| ||||| ||| ||||||||||    
T  1621385 agattcaccctatacgtttttagcaatattgatcatgttattgtctctgatgtattctataaatttgaatgaatgaatatc 1621305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 13634379 - 13634435
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || ||||||||| |||| ||| ||||||||||||||||||||||||||    
T  13634379 ttgtatctgatgtactctatcgatttgaatgaatgaatatcattttgtttttgtcaa 13634435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 37465741 - 37465801
Alignment:
Q  34 catgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||||||||| || || ||||||||||||||| |||||||||| |||||| |||||    
T  37465741 catgttattgtatctgatgtattctatcaatttaaatgaatgaatatcgttttgtctttgt 37465801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 43853678 - 43853770
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttg 93  Q
    ||||| ||| |||||||||||||| || | ||  |||||||||||||| || || ||||||||||| ||| |||||||||| |||| ||||||    
T  43853678 agattaaccatttacatttttagcgatgttgagtatgttattgtatctgatgtattctatcaatttgaatgaatgaatatcgttttatttttg 43853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 7393435 - 7393498
Alignment:
Q  3 attcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaattt 66  Q
    |||||||||||||||||||||| |||| || |||  |||||||||| ||||| |||||||||||    
T  7393435 attcaccctttacatttttagcgatattgatcataatattgtatctgatatattctatcaattt 7393498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 9048931 - 9048994
Alignment:
Q  34 catgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||||||| |  || ||||||||||| ||| |||||||||| |||||||||||||||    
T  9048931 catgttattgtatctcaattattctatcaatttgaatgaatgaatatcgttttgtttttgtcaa 9048994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 11876001 - 11876048
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||| |||||||||||||||||||| ||||||||||| ||||||||||    
T  11876001 atattctctatcaatttaaataaataaatatcattttatttttgtcaa 11876048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 7008392 - 7008350
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatcattttgttttt 92  Q
    |||||| |||||||||||||| |||||||||||||||||||||    
T  7008392 atatacactatcaatttaaatgaatgaatatcattttgttttt 7008350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 12199532 - 12199477
Alignment:
Q  33 acatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgttt 90  Q
    |||||||||||||||| |||||||||  |||||| |||||||||||||| ||||||||    
T  12199532 acatgttattgtatctaatatactct--caatttgaataaatgaatatcgttttgttt 12199477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 52060797 - 52060710
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgttt 90  Q
    ||||||||  |||||||||||||   | | ||||||||||||||||||  ||||||||  |||||| |||||||||||||| ||||||||    
T  52060797 agattcacattttacatttttagtgttgttgaacatgttattgtatctgttatactct--caatttgaataaatgaatatcgttttgttt 52060710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 21686087 - 21686030
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaat 98  Q
    |||||||| || ||||||||| |||| ||| |||||||||| ||||||||||||||||    
T  21686087 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtcaat 21686030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 22806802 - 22806851
Alignment:
Q  31 gaacatgttattgtatcttatatactctatcaatttaaataaatgaatat 80  Q
    |||| ||||||||||||| ||||||| ||||||||| |||||||||||||    
T  22806802 gaacgtgttattgtatctgatatactttatcaatttgaataaatgaatat 22806851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 52933823 - 52933738
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcatttt 86  Q
    ||||| || ||||||||||||||| || | |  ||||||||||||||| || || | ||||||||| |||||||||||||| ||||    
T  52933823 agatttacgctttacatttttagcgatgttggtcatgttattgtatctaatgtattttatcaatttgaataaatgaatatcgtttt 52933738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 55228203 - 55228296
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||| |||||||||||| | |  | ||  |||||| ||||| | ||||| ||||||||||||||| |||| |||| |||||||||||||    
T  55228203 agattcaccatttacatttttaacgacgttgataatgttagtgtatttgatatattctatcaatttaaatgaatgcatattattttgtttttgt 55228296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 7242492 - 7242460
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattt 85  Q
    |||||||||||||||||||||||||||||||||    
T  7242492 tactctatcaatttaaataaatgaatatcattt 7242460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 10258746 - 10258690
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || |||||||||||||| ||| ||||||| ||| ||||||||||||||    
T  10258746 ttgtatctgatgtactctatcaatttgaatgaatgaatctcactttgtttttgtcaa 10258690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 17949168 - 17949112
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| |||||||||||| |||| ||| |||||||||| |||||||| ||||||    
T  17949168 ttgtatctgatatactctatcgatttgaatgaatgaatatcgttttgtttctgtcaa 17949112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 17953020 - 17952964
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| |||||||||||| |||| ||| |||||||||| |||||||| ||||||    
T  17953020 ttgtatctgatatactctatcgatttgaatgaatgaatatcgttttgtttctgtcaa 17952964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 19853357 - 19853301
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || ||||||||| |||| ||| |||||||||| |||||||||||||||    
T  19853357 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 19853301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 53811294 - 53811338
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||| |||||||| |||||||||| |||||||||||||||    
T  53811294 tactctatcgatttaaatgaatgaatatcgttttgtttttgtcaa 53811338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18936017 - 18936111
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtca 96  Q
    ||||||||||| ||  |||||||| |||| || |||| |||||| ||| || || ||||||||||| ||| |||||||||| |||| |||||||||    
T  18936017 agattcaccctatatgtttttagcgatattgatcatgctattgtctctgatgtattctatcaatttgaatgaatgaatatc-ttttatttttgtca 18936111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 33332462 - 33332379
Alignment:
Q  3 attcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcatttt 86  Q
    ||||||||||||| |||||||| |||| || ||| ||||||| ||| || || ||||||||||| ||| |||| ||||| ||||    
T  33332462 attcaccctttacgtttttagcgatattgatcatattattgtctctgatgtattctatcaatttgaatgaatggatatcgtttt 33332379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 92
Target Start/End: Original strand, 43157185 - 43157224
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgttttt 92  Q
    |||||||||||||| ||||||||||||||||||| |||||    
T  43157185 tactctatcaatttgaataaatgaatatcatttttttttt 43157224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 12493608 - 12493650
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtc 95  Q
    |||||||||||||| ||| ||||||||||||||| ||||||||    
T  12493608 tactctatcaattttaatgaatgaatatcattttatttttgtc 12493650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 19896454 - 19896416
Alignment:
Q  56 tctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  19896454 tctattaatttaaatgaatgaatatcattttgtttttgt 19896416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 9714148 - 9714240
Alignment:
Q  4 ttcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||| |||||| | || | || || |||||||| | |||| || ||||||||||| ||| || ||||||||||||| |||||||||    
T  9714148 ttcaccctttacgtttttaacgattt-gatcaggttattgtcttttatgtattctatcaatttgaatgaacgaatatcattttgcttttgtcaa 9714240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 22611454 - 22611507
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||| || ||||||||| |||||||| ||| |||||| ||||||||||||    
T  22611454 ttgtatctgatgtactctatcgatttaaatgaataaatatcgttttgtttttgt 22611507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 26633516 - 26633463
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||| || ||||||||| |||| ||| |||||||||| ||||||||||||    
T  26633516 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 26633463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 56040491 - 56040438
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||| || ||||||||| |||| ||| |||||||||| ||||||||||||    
T  56040491 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 56040438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 4142597 - 4142553
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||| |||| ||| |||||||||| |||||||||||||||    
T  4142597 tactctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 4142553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 4622410 - 4622378
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattt 85  Q
    |||||||||||||| ||||||||||||||||||    
T  4622410 tactctatcaatttcaataaatgaatatcattt 4622378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 6973090 - 6973122
Alignment:
Q  60 tcaatttaaataaatgaatatcattttgttttt 92  Q
    ||||||||||| |||||||||||||||||||||    
T  6973090 tcaatttaaatgaatgaatatcattttgttttt 6973122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 10496600 - 10496656
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||| | ||||||||||||||||| ||| |||||||||| ||||  |||||||||    
T  10496600 ttgtatttgatatactctatcaatttgaatgaatgaatatcgttttaattttgtcaa 10496656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 27360076 - 27360032
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||||||||||| ||  ||||||||||||||| |||||||    
T  27360076 atatactctatcaatttgaaagaatgaatatcattttatttttgt 27360032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 27652178 - 27652258
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatc 81  Q
    ||||||| ||| ||| |||||||| |||| || ||||||||||| | | || || ||||||||||| ||| ||||||||||    
T  27652178 agattcatcctatacgtttttagcgatatcgatcatgttattgtctttgatgtattctatcaatttgaatgaatgaatatc 27652258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 30416333 - 30416301
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattt 85  Q
    |||||||||||||||||| ||||||||||||||    
T  30416333 tactctatcaatttaaatgaatgaatatcattt 30416301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 32766778 - 32766834
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || ||||||||| |||| ||| |||||||||  |||||||||||||||    
T  32766778 ttgtatctgatgtactctatcgatttgaatgaatgaatattgttttgtttttgtcaa 32766834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 35338704 - 35338736
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattt 85  Q
    |||||||||||||||||||||||||||| ||||    
T  35338704 tactctatcaatttaaataaatgaatataattt 35338736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 44596935 - 44596979
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||||| ||| |||||||||  |||||||||||||||    
T  44596935 tactctatcaatttgaattaatgaatattgttttgtttttgtcaa 44596979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 48351068 - 48350972
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||| ||||||| || ||||| || | || ||||| ||||||||| || || ||||||||||| |||  |||||| || |||||||| ||||||    
T  48351068 agattcatcctttacgttattagcgatgttgatcatgtcattgtatctgatgtattctatcaatttgaatttatgaatgtcgttttgtttctgtcaa 48350972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 53444383 - 53444439
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || || |||||| |||| ||| ||||||||| ||||||||||||||||    
T  53444383 ttgtatctaatgtaatctatctatttgaatgaatgaatattattttgtttttgtcaa 53444439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 45789762 - 45789852
Alignment:
Q  5 tcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||||||||||| || | |||||||||||||||||| ||  ||||  ||||||||||| |||||||||| |||| ||||||||||    
T  45789762 tcaccctttacatttttagcgatgttgaacatgttattgtatctgatgcactc--tcaatttaaatgaatgaatatcgttttatttttgtcaa 45789852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 13075530 - 13075435
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtca 96  Q
    ||||||||||||||| |||||||| |||| ||  |||||||||||||| ||||| |||||||| |||||| ||||| |||  ||||| ||||||||    
T  13075530 agattcaccctttacttttttagcgatattgattatgttattgtatctaatatattctatcaacttaaatgaatgagtattgttttgcttttgtca 13075435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 50616549 - 50616456
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||  ||||| ||||||||||| | || ||||||||| ||||| || || | ||||||||||||||||| ||||||| |||| ||||||    
T  50616549 agattcacgttttacgtttttagcaatgttgatcatgttattatatctaatgtattttatcaatttaaataaataaatatcagtttgcttttgt 50616456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 50624376 - 50624283
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||  ||||| ||||||||||| | || ||||||||| ||||| || || | ||||||||||||||||| ||||||| |||| ||||||    
T  50624376 agattcacgttttacgtttttagcaatgttgatcatgttattatatctaatgtattttatcaatttaaataaataaatatcagtttgcttttgt 50624283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 44915886 - 44915942
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || |||||||||||||| ||| ||||||||||||||| ||||||||||    
T  44915886 ttgtatctgatgtactctatcaatttgaatgaatgaatatcattttatttttgtcaa 44915942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 49504440 - 49504384
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||| ||||||||| |||| ||| |||||||||| |||||||||||||||    
T  49504440 ttgtatcttatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 49504384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 26535583 - 26535637
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtc 95  Q
    |||||||| || |||||||||||||| ||| |||||||||| |||||||||||||    
T  26535583 ttgtatctgatgtactctatcaatttgaatgaatgaatatcgttttgtttttgtc 26535637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 48750405 - 48750483
Alignment:
Q  3 attcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatc 81  Q
    ||||||||| ||| |||||||| |||| || ||||||||||| ||| || || ||||||||||| ||| ||||||||||    
T  48750405 attcaccctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 48750483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 10776302 - 10776253
Alignment:
Q  45 atcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||| ||||||||||||||||| ||| || ||||||||||||||||||||    
T  10776302 atctgatatactctatcaatttgaatgaacgaatatcattttgtttttgt 10776253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 94
Target Start/End: Original strand, 14872898 - 14872939
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  14872898 tactctatcgatttaaatgaatgaatatcattttgtttttgt 14872939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 13222004 - 13221960
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||    
T  13222004 atatactctatcaatttgaataaatgaatatcctttagtttttgt 13221960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 27456748 - 27456792
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||||| ||| |||||||||| |||||||||||||||    
T  27456748 tactctatcaatttgaatgaatgaatatcgttttgtttttgtcaa 27456792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 36775584 - 36775504
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatc 81  Q
    ||||||||||| ||| |||||||| |||| || ||||||||||| ||| || || || |||||||| ||| ||||||||||    
T  36775584 agattcaccctatacgtttttagcgatattgatcatgttattgtctctgatgtattcaatcaatttgaatgaatgaatatc 36775504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 41081520 - 41081476
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||| |||| ||| ||||||||||||||||||||||||||    
T  41081520 tactctatcgatttgaatgaatgaatatcattttgtttttgtcaa 41081476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 85
Target Start/End: Original strand, 171531 - 171566
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatcattt 85  Q
    ||||||||||||||||||||| ||||||||||||||    
T  171531 atatactctatcaatttaaatgaatgaatatcattt 171566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 940485 - 940536
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgttttt 92  Q
    ||||||||||| ||||||||  |||||||| |||||||||| ||||||||||    
T  940485 ttgtatcttatgtactctattgatttaaatgaatgaatatcgttttgttttt 940536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 9341977 - 9342028
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatcattttgtttttgtcaatttt 101  Q
    ||||| ||||||||||||||| || ||||||||| || ||||||||||||||    
T  9341977 atatattctatcaatttaaatgaaagaatatcatattatttttgtcaatttt 9342028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 12635431 - 12635470
Alignment:
Q  56 tctatcaatttaaataaatgaatatcattttgtttttgtc 95  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  12635431 tctatcaatttaaatgaatgaatatcgttttgtttttgtc 12635470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 31837096 - 31837143
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||| ||| || |||||||| ||||||||||||||||||||||||||    
T  31837096 atataatctctcgatttaaatgaatgaatatcattttgtttttgtcaa 31837143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 85
Target Start/End: Original strand, 43504223 - 43504258
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatcattt 85  Q
    ||||||||||||||| ||||||||||||||||||||    
T  43504223 atatactctatcaatgtaaataaatgaatatcattt 43504258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 41994684 - 41994762
Alignment:
Q  3 attcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatc 81  Q
    ||||| |||||| ||||||||  || | || ||||||||||||||| ||||  ||||||||||| ||||||| ||||||    
T  41994684 attcatcctttaaatttttagtgattttgatcatgttattgtatctgatattttctatcaatttgaataaataaatatc 41994762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 5984066 - 5984119
Alignment:
Q  44 tatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||| ||||| |||||| |||| ||| |||||||||| |||||||||||||||    
T  5984066 tatctgatatattctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 5984119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 11462327 - 11462274
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||| || ||||||||| |||| ||| |||||||||| ||||||||||||    
T  11462327 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 11462274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 27579961 - 27579920
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||||||||| ||||||||||||| ||||| |||||||    
T  27579961 tactctatcaatttgaataaatgaatattattttatttttgt 27579920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 38520344 - 38520307
Alignment:
Q  60 tcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  38520344 tcaatttaaatgaatgaatatgattttgtttttgtcaa 38520307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 47133164 - 47133205
Alignment:
Q  56 tctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||| ||| |||||||||| |||||||||||||||    
T  47133164 tctatcaatttgaatgaatgaatatcgttttgtttttgtcaa 47133205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 18649800 - 18649756
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||| ||||||||||||  ||||||| |||||||||||||||    
T  18649800 atatactatatcaatttaaacgaatgaatgtcattttgtttttgt 18649756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 30032948 - 30032996
Alignment:
Q  48 ttatatactctatcaatttaaataaatgaatatcattttgtttttgtca 96  Q
    |||| |||||||||||||| |||||||||||||  ||||||||| ||||    
T  30032948 ttatgtactctatcaatttgaataaatgaatatggttttgttttcgtca 30032996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 40163279 - 40163219
Alignment:
Q  37 gttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||| || || ||||||||||| ||| |||||||||| ||||| |||| ||||    
T  40163279 gttattgtatctcatgtattctatcaatttgaatgaatgaatatcgttttgcttttatcaa 40163219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 679324 - 679416
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttg 93  Q
    ||||||||||||||| ||||||||||| | ||  |||||||||||||| || || ||||||||||| ||| ||| |||| |||||||||||||    
T  679324 agattcaccctttacgtttttagcaatgttgattatgttattgtatctgatgtattctatcaatttgaatgaataaataacattttgtttttg 679416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 30776879 - 30776974
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||||||| |||||||| |||| || ||||||||||| ||| |  || ||||||||| | ||| ||||||||||| ||||||||||||||    
T  30776879 agattcaccctttacgtttttagcgatattgatcatgttattgtctctgacgtattctatcaatatgaatgaatgaatatca-tttgtttttgtcaa 30776974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 34018805 - 34018861
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  34018805 ttgtatctaatatactctatcaatttaaatgaatgaatatcgttttgtttttatcaa 34018861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 606449 - 606505
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || ||||||||| |||| ||| ||||||||||||||||||||||||||    
T  606449 ttgtatctgatgtactctatcgatttgaatgaatgaatatcattttgtttttgtcaa 606505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 8102942 - 8103037
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||| ||||| |||||||| |||| || ||||||||||| ||| || || ||||||||| | ||| ||||||||||  ||||||||||||||    
T  8102942 agattcaccttttacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatatgaatgaatgaatatc-ctttgtttttgtcaa 8103037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 13546571 - 13546486
Alignment:
Q  5 tcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgttttt 92  Q
    ||||||||||| ||||||| ||| | |||||||||||||||||| || |||||  |||||||||||  ||||| ||| ||||||||||    
T  13546571 tcaccctttacgtttttagtaatgttgaacatgttattgtatctgatgtactc--tcaatttaaatggatgaaaatcgttttgttttt 13546486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 29319722 - 29319666
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| ||||||| ||| ||||| ||| ||||||||||||||||||||||||||    
T  29319722 ttgtatctgatatactttattaatttgaatgaatgaatatcattttgtttttgtcaa 29319666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 31851731 - 31851670
Alignment:
Q  36 tgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| |||| || || ||||||||||| ||| ||||||||| ||||||||||||||||    
T  31851731 tgttattgcatctgatgtattctatcaatttgaatgaatgaatattattttgtttttgtcaa 31851670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 34185535 - 34185486
Alignment:
Q  45 atcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||| ||||||||||||||||| ||| ||||||||||||||| |||||||    
T  34185535 atctgatatactctatcaatttgaatgaatgaatatcattttatttttgt 34185486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 67846 - 67786
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaatttt 101  Q
    |||||||| |||||||||||| |||| ||| |||||||| | |||| ||||||||||||||    
T  67846 ttgtatctgatatactctatcgatttgaatgaatgaataccgttttatttttgtcaatttt 67786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 32327065 - 32327009
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || ||||||||| |||| ||| |||||||||| |||||||||||||||    
T  32327065 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 32327009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 6957357 - 6957420
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaat 64  Q
    ||||||||||||||| |||||||| || | |||||| ||||||||| | || ||||||||||||    
T  6957357 agattcaccctttacgtttttagcgatgttgaacatattattgtatttgatgtactctatcaat 6957420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 33053001 - 33052958
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtca 96  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||    
T  33053001 tactctatcaatttgaatgaatgaatatcgttttgtttttgtca 33052958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 97
Target Start/End: Original strand, 12653215 - 12653249
Alignment:
Q  63 atttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| ||||||||||||||||||||||||||    
T  12653215 atttaaatgaatgaatatcattttgtttttgtcaa 12653249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 106
Target Start/End: Original strand, 4660857 - 4660909
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaattttattta 106  Q
    |||||||||||||| ||| ||||||||||  ||| |||||||||||||||||||    
T  4660857 tactctatcaatttgaatgaatgaatatc-gtttatttttgtcaattttattta 4660909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 12170713 - 12170766
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||| || ||||||||| |||| ||| |||||||||| ||||||||||||    
T  12170713 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 12170766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 16419426 - 16419463
Alignment:
Q  60 tcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  16419426 tcaatttgaataaatgaatatcattttatttttgtcaa 16419463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 9341496 - 9341440
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || ||||||||| |||| ||| ||||| |||| |||||||||||||||    
T  9341496 ttgtatctgatgtactctatcgatttgaatgaatgagtatcgttttgtttttgtcaa 9341440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 32134559 - 32134595
Alignment:
Q  56 tctatcaatttaaataaatgaatatcattttgttttt 92  Q
    |||||||||||||||||||||||||| |||| |||||    
T  32134559 tctatcaatttaaataaatgaatatcgttttattttt 32134595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 11344026 - 11344119
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||| | ||||| |||||||| || | || ||||||||||||||| || || | ||||||||| |||||||||||||| ||||||||||||    
T  11344026 agattcatcatttacgtttttagcgatgttgatcatgttattgtatctgatgtattatatcaatttgaataaatgaatatcgttttgtttttgt 11344119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 9977055 - 9976999
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || |||||||||||||||||| |||||||||| |||||||||||||||    
T  9977055 ttgtatctgatgtactctatcaatttaaatgaatgaatatcgttttgtttttgtcaa 9976999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 48930924 - 48931019
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||| ||| ||| |||||||| |||| || ||||||||||| ||| || || ||||||||||||||| ||||||||||  ||||||||||||||    
T  48930924 agattcaacctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttaaatgaatgaatatc-ctttgtttttgtcaa 48931019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 6559135 - 6559182
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  6559135 atataatctctcaatttaaatgaatgaatatcattttgtttttgtcaa 6559182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 38050938 - 38050845
Alignment:
Q  3 attcaccctttacatttttagcaatatagaacatgttattgtatcttatat--actctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||||||||||||||||| || | ||||| ||  |||||||| || |  ||| ||| ||||||||| |||||||||| ||||||||||||    
T  38050938 attcaccctttacatttttagcgatgttgaacaagtcgttgtatctgatgtgtactatattaatttaaatgaatgaatatcgttttgtttttgt 38050845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 38880479 - 38880402
Alignment:
Q  20 ttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||| |||| || ||||||||| ||||| || || |||| |||||| |||||||||| ||| |||||||||||||||    
T  38880479 ttagcgatattgatcatgttattatatctgatgtattctaacaatttgaataaatgaacatcgttttgtttttgtcaa 38880402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 46821618 - 46821533
Alignment:
Q  9 cctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||| |||||| | || | || |||||||||| || | ||||| ||||| ||||||||| |||||||||| ||||||||||||    
T  46821618 cctttacgtttttaacgatgttgatcatgttattgcatatgatatattctattaatttaaatgaatgaatatcgttttgtttttgt 46821533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 3222933 - 3222897
Alignment:
Q  58 tatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||||||| |||||||||||||||||||||||    
T  3222933 tatcaatttaaatgaatgaatatcattttgtttttgt 3222897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 3267053 - 3267009
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||||| |||||| ||| |||||||||||||||||||||||    
T  3267053 atatactctaacaatttgaatgaatgaatatcattttgtttttgt 3267009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 8319723 - 8319766
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||    
T  8319723 tactctatcaatttaaatgaatgaatatca-tttgtttttgtcaa 8319766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 17611652 - 17611696
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||||| ||| |||||||||| |||||||||||||||    
T  17611652 tactctatcaatttgaatgaatgaatatcgttttgtttttgtcaa 17611696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 28044601 - 28044545
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || ||||||||| |||| ||| |||||||||| |||||||||||||||    
T  28044601 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 28044545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 35133164 - 35133244
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatc 81  Q
    ||||||||||| ||| |||||| | |||| || ||||||||||| ||| || || ||||||||||| ||| ||||||||||    
T  35133164 agattcaccctatacgtttttaacgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 35133244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 38780463 - 38780427
Alignment:
Q  61 caatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||||||||||| ||||||||||||||||    
T  38780463 caatttaaataaatgaatattattttgtttttgtcaa 38780427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 97
Target Start/End: Original strand, 3398478 - 3398517
Alignment:
Q  58 tatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  3398478 tatcaatttaaatgaatgaatatcattttatttttgtcaa 3398517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 4999869 - 4999810
Alignment:
Q  35 atgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||||||||| ||||| | ||| ||||| ||| |||||||||| ||||||||||||    
T  4999869 atgttattgtatctgatatattatattaatttgaatgaatgaatatcgttttgtttttgt 4999810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 40762014 - 40762060
Alignment:
Q  50 atatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  40762014 atatactctatcaatttgaataaatgaatatcgtttt-tttttgtcaa 40762060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 49147966 - 49147891
Alignment:
Q  19 tttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||||| ||| || ||||||||||| ||||| ||||| |||||||||  || |||||| |||| |||||||    
T  49147966 tttagcaatattgaatatattattgtatctaatatattctattaatttaaatgcataaatatcgttttctttttgt 49147891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 48316654 - 48316608
Alignment:
Q  51 tatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||| |||| ||| |||||||||| |||||||||||||||    
T  48316654 tatactctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 48316608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 3876126 - 3876033
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||| | ||||| ||||||   |||| || ||||||||||||| | || || ||||||||||| ||  || ||||||||||||||||||||    
T  3876126 agattcatcatttacgtttttaatgatattgatcatgttattgtatttgatgtattctatcaatttgaacgaaagaatatcattttgtttttgt 3876033  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 12141152 - 12141099
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||| || ||||||||| |||| ||| |||||||||| ||||||||||||    
T  12141152 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttgtttttgt 12141099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 25068274 - 25068367
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||| ||||| |||||||| |||| ||  |||||||||| ||| || || ||||||||||| ||  |||||||||| | ||| ||||||    
T  25068274 agattcaccatttacgtttttagcgatattgatgatgttattgtttctgatgtattctatcaatttgaaagaatgaatatcgtattgcttttgt 25068367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26623663 - 26623606
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactct 58  Q
    ||||||||||||||| |||| ||| || |  ||||||||||||||||| |||||||||    
T  26623663 agattcaccctttacgttttaagcgatgttaaacatgttattgtatctgatatactct 26623606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28476443 - 28476520
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaat 78  Q
    ||||||||| ||||| ||||||||||||| || ||||||||| | ||| || || ||||||||| | ||| |||||||    
T  28476443 agattcaccatttacgtttttagcaatattgatcatgttattatctctgatgtattctatcaatatgaatgaatgaat 28476520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 94
Target Start/End: Original strand, 35261558 - 35261599
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||||||||| ||| ||||||||||||| |||||||||    
T  35261558 tactctatcaatttgaatgaatgaatatcattctgtttttgt 35261599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 772851 - 772883
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattt 85  Q
    |||||||||||||||||| ||||||||||||||    
T  772851 tactctatcaatttaaatgaatgaatatcattt 772883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 25255444 - 25255521
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatat 80  Q
    |||| |||||||||| |||||||| |||| |||||||||||| ||| | || |||||  ||||||| ||| |||||||||    
T  25255444 agatacaccctttacgtttttagcgatattgaacatgttattatatttgatgtactc--tcaatttgaatgaatgaatat 25255521  T

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Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 28407751 - 28407707
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||||| ||| |||||||||| |||||||||| ||||    
T  28407751 tactctatcaatttgaatgaatgaatatcgttttgtttttatcaa 28407707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 31235596 - 31235556
Alignment:
Q  57 ctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||| |||| ||||||||||||||| ||||||||||||||    
T  31235596 ctatcgatttgaataaatgaatatcagtttgtttttgtcaa 31235556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 34899440 - 34899396
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||||| ||| ||| ||||||||||| ||||||||||    
T  34899440 tactctatcaatttgaatgaataaatatcattttatttttgtcaa 34899396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 7932 - 8027
Alignment:
Q  3 attcaccctt-tacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||| ||| ||||||||||| |  |||| |||||||||| | || |||||||||||||| ||| |||||||||| |||| ||||||||||    
T  7932 attcacccttgtacgtttttagcaatgttaaacaagttattgtatttgatgtactctatcaatttgaatgaatgaatatcgttttttttttgtcaa 8027  T

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Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 8868027 - 8868118
Alignment:
Q  3 attcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||| ||||| ||||||||||| | || ||||||||||||||| || || ||||||||||| ||| ||||||| || ||||| ||||||    
T  8868027 attcaccttttacgtttttagcaatgttgatcatgttattgtatctgatgtattctatcaatttgaatgaatgaatgtcgttttgcttttgt 8868118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 9637252 - 9637199
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||| || |||||||||||||||||| |||||||||| ||||||||||||    
T  9637252 ttgtatctgatgtactctatcaatttaaatgaatgaatatcgttttgtttttgt 9637199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 41060135 - 41060042
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatc-aatttaaataaatgaatatcattttgtttttg 93  Q
    ||||||| ||||||| |||||||  || | |||||||||||||||||| ||| ||| |||| ||||||||| || ||||||| |||||||||||    
T  41060135 agattcatcctttacgtttttagtgatgttgaacatgttattgtatctgatacactttatcaaatttaaatgaaagaatatcgttttgtttttg 41060042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 28086655 - 28086599
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || |||| ||||||||| |||||||||||||| |||||||||||||||    
T  28086655 ttgtatctgatgtactatatcaatttgaataaatgaatatcgttttgtttttgtcaa 28086599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 470993 - 470934
Alignment:
Q  38 ttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||| || || ||||||||||||||| |||||||||  |||||||||||||||    
T  470993 ttattgtatctgatgtattctatcaatttaaatgaatgaatattgttttgtttttgtcaa 470934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 19443906 - 19443843
Alignment:
Q  31 gaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||||||| ||||| || |||||||||||||| ||| |||||||||| |||| |||||||    
T  19443906 gaacatgttattatatctgatgtactctatcaatttgaatgaatgaatatcgttttatttttgt 19443843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 30568149 - 30568108
Alignment:
Q  56 tctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  30568149 tctatcaatttgaatgaatgaatatcattttgtttttgtcaa 30568108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14585894 - 14585974
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatc 81  Q
    ||||||||||| ||| |||||||| |||| || ||||||||| | ||| || || ||||||||||| ||| ||||||||||    
T  14585894 agattcaccctatacgtttttagcgatattgatcatgttattatctctgatgtattctatcaatttgaatgaatgaatatc 14585974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 27498209 - 27498153
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || |||||||||||||| ||| ||||||||| ||||| ||||||||||    
T  27498209 ttgtatctgatgtactctatcaatttgaatgaatgaatattattttatttttgtcaa 27498153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 40618916 - 40618860
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || || ||||||||||| ||| |||||||||| |||||||||||||||    
T  40618916 ttgtatctgatgtattctatcaatttgaatgaatgaatatcgttttgtttttgtcaa 40618860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 41896734 - 41896828
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||| ||| ||||||||||||| || ||||||||||  ||| || || ||||||||||| ||| |||||||||   ||||||||||||||    
T  41896734 agattcaccctatacgtttttagcaatattgatcatgttattg-ctctgatgtattctatcaatttgaatgaatgaatat-tctttgtttttgtcaa 41896828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 42046438 - 42046533
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||| ||| |||||||| |||| || |||||||||||  || || || |||||| |||| ||| ||||||||||  ||||||||||||||    
T  42046438 agattcaccctatacgtttttagcgatattgatcatgttattgtcactgatgtattctatcgatttgaatgaatgaatatc-ctttgtttttgtcaa 42046533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 31720670 - 31720631
Alignment:
Q  58 tatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  31720670 tatcaatttaagtgaatgaatatcattttgtttttgtcaa 31720631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 14916017 - 14915979
Alignment:
Q  56 tctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  14916017 tctatcaatttaaataaattaatatcgttttgtttttgt 14915979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 16644735 - 16644777
Alignment:
Q  50 atatactctatcaattt-aaataaatgaatatcattttgtttt 91  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  16644735 atatactctatcaatttgaaatgaatgaatatcattttgtttt 16644777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 94
Target Start/End: Complemental strand, 43889933 - 43889899
Alignment:
Q  60 tcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||||| |||||||||||||||||||||||    
T  43889933 tcaatttaaatgaatgaatatcattttgtttttgt 43889899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 1236526 - 1236485
Alignment:
Q  56 tctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||| |||| ||| ||||||||||||||||||||||||||    
T  1236526 tctatcgatttgaatgaatgaatatcattttgtttttgtcaa 1236485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 10377931 - 10377976
Alignment:
Q  52 atactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||| |||| ||| |||||||||| |||||||||||||||    
T  10377931 atactctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 10377976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 15596985 - 15596940
Alignment:
Q  52 atactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||||||| ||| |||||||||| ||||||||| |||||    
T  15596985 atactctatcaatttgaatgaatgaatatcgttttgttttcgtcaa 15596940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 16247067 - 16247014
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||| || || || |||||||| ||||||||||||||||||| |||||||    
T  16247067 ttgtatctgatgtattccatcaatttgaataaatgaatatcattttatttttgt 16247014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 16937978 - 16937945
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcatttt 86  Q
    |||||||||||||||||| |||||||||||||||    
T  16937978 tactctatcaatttaaatgaatgaatatcatttt 16937945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 97
Target Start/End: Original strand, 30478680 - 30478709
Alignment:
Q  68 aataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||||||||||||||||||||||||||    
T  30478680 aataaatgaatatcattttgtttttgtcaa 30478709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 34610069 - 34610146
Alignment:
Q  17 tttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    |||||||||||||  |  |||||||||||||| || || | ||||||||| ||| ||| |||||| ||||||||||||    
T  34610069 tttttagcaatattaatgatgttattgtatctgatgtattatatcaatttgaatgaataaatatcgttttgtttttgt 34610146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 35580695 - 35580732
Alignment:
Q  60 tcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  35580695 tcaacttaaatgaatgaatatcattttgtttttgtcaa 35580732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 7883084 - 7883028
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || ||||||||  |||| ||| |||||||||| |||||||||||||||    
T  7883084 ttgtatctgatgtactctattgatttgaatgaatgaatatcgttttgtttttgtcaa 7883028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 15286732 - 15286700
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattt 85  Q
    |||||||||||||||||| ||||||||||||||    
T  15286732 tactctatcaatttaaatgaatgaatatcattt 15286700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 15467101 - 15467069
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattt 85  Q
    |||||||||||||||||| ||||||||||||||    
T  15467101 tactctatcaatttaaatgaatgaatatcattt 15467069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 17693444 - 17693400
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||||||||| | | |||||||||| |||||||||||||||    
T  17693444 tactctatcaatttgagtgaatgaatatcgttttgtttttgtcaa 17693400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18890571 - 18890491
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatc 81  Q
    ||||||||||| | | |||||||| ||||  | ||||||||||| ||| || || ||||||||||| ||| ||||||||||    
T  18890571 agattcaccctatccgtttttagcgatattaatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 18890491  T

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Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 36545488 - 36545456
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattt 85  Q
    |||||||||||||| ||||||||||||||||||    
T  36545488 tactctatcaatttgaataaatgaatatcattt 36545456  T

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Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 39452535 - 39452575
Alignment:
Q  54 actctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||| |||||| |||| |||||||||||||||||||||||    
T  39452535 actctctcaattcaaatgaatgaatatcattttgtttttgt 39452575  T

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Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 4370 - 4457
Alignment:
Q  10 ctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||| |||||||| |||| ||  |||||||||||||| || || | ||||||||| ||| ||||||||| |||||| |||||||||    
T  4370 ctttacgtttttagcgatattgatgatgttattgtatctgatgtattttatcaatttgaatgaatgaatattattttgcttttgtcaa 4457  T

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Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 40805 - 40850
Alignment:
Q  49 tatatactctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||    
T  40805 tatatactctatcaatttaaaaaaatgaacatcaatttgtttttgt 40850  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 3919 - 3823
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||| |||||||||||||||||| || | || ||  ||||||||||  ||  ||||||||||||| ||| |||||||||| | ||| |||||||||    
T  3919 agatttaccctttacatttttagcgatgtcgatcactttattgtatcagatgaactctatcaatttgaatgaatgaatatcgtattgcttttgtcaa 3823  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 26869 - 26827
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtc 95  Q
    |||||||||||||| ||| ||||||||||||||| ||||||||    
T  26869 tactctatcaattttaatgaatgaatatcattttatttttgtc 26827  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 57919 - 57881
Alignment:
Q  56 tctatcaatttaaataaatgaatatcattttgtttttgt 94  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  57919 tctatcaatttaaatgaatgaatatcgttttgtttttgt 57881  T

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Target: scaffold0146 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 16129 - 16092
Alignment:
Q  60 tcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  16129 tcaatttgaatgaatgaatatcattttgtttttgtcaa 16092  T

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Target: scaffold0888 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 1552 - 1472
Alignment:
Q  1 agattcaccctttacatttttagcaatatagaacatgttattgtatcttatatactctatcaatttaaataaatgaatatc 81  Q
    ||||||||||| ||| |||| ||  |||| || ||||||||||| ||| || || ||||||||||| ||| ||||||||||    
T  1552 agattcaccctatacgttttaagggatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 1472  T

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Target: scaffold0056 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 81
Target Start/End: Original strand, 74593 - 74621
Alignment:
Q  53 tactctatcaatttaaataaatgaatatc 81  Q
    |||||||||||||||||||||||||||||    
T  74593 tactctatcaatttaaataaatgaatatc 74621  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 53234 - 53190
Alignment:
Q  53 tactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||| ||||||||| ||| |||||||||| |||||||||||||||    
T  53234 tactatatcaatttgaatgaatgaatatcgttttgtttttgtcaa 53190  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 71715 - 71659
Alignment:
Q  41 ttgtatcttatatactctatcaatttaaataaatgaatatcattttgtttttgtcaa 97  Q
    |||||||| || |||||||||||||| ||| | ||| |||| |||||||||||||||    
T  71715 ttgtatctgatgtactctatcaatttgaatgactgagtatctttttgtttttgtcaa 71659  T

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