View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9410_low_46 (Length: 244)

Name: NF9410_low_46
Description: NF9410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9410_low_46
NF9410_low_46
[»] chr3 (72 HSPs)
chr3 (46-228)||(40807883-40808065)
chr3 (53-228)||(40812720-40812895)
chr3 (46-228)||(44274305-44274487)
chr3 (59-237)||(49900608-49900786)
chr3 (63-228)||(17044853-17045018)
chr3 (59-228)||(17518869-17519038)
chr3 (59-228)||(17533731-17533900)
chr3 (46-228)||(10563596-10563777)
chr3 (63-228)||(17047013-17047178)
chr3 (63-216)||(22306583-22306736)
chr3 (63-226)||(41172371-41172534)
chr3 (78-228)||(50348041-50348191)
chr3 (63-228)||(11259318-11259483)
chr3 (63-228)||(17538993-17539158)
chr3 (67-228)||(17693954-17694115)
chr3 (63-228)||(35354489-35354654)
chr3 (67-228)||(10311415-10311575)
chr3 (63-228)||(15931508-15931672)
chr3 (46-223)||(19568191-19568368)
chr3 (66-212)||(14508749-14508896)
chr3 (46-183)||(33565018-33565156)
chr3 (46-183)||(35960911-35961049)
chr3 (88-180)||(35064566-35064658)
chr3 (46-185)||(42323954-42324094)
chr3 (56-223)||(9510909-9511076)
chr3 (56-223)||(9518884-9519051)
chr3 (59-185)||(11563654-11563781)
chr3 (53-175)||(13185834-13185957)
chr3 (53-167)||(16050875-16050989)
chr3 (63-126)||(17541423-17541486)
chr3 (164-228)||(35064681-35064745)
chr3 (63-185)||(49968859-49968981)
chr3 (170-228)||(5200277-5200335)
chr3 (62-167)||(24177735-24177840)
chr3 (53-164)||(11885547-11885658)
chr3 (46-104)||(5200226-5200284)
chr3 (59-115)||(15566744-15566800)
chr3 (80-185)||(37038978-37039085)
chr3 (62-144)||(12509349-12509431)
chr3 (62-115)||(15446867-15446920)
chr3 (46-164)||(22758817-22758935)
chr3 (53-115)||(17208524-17208586)
chr3 (62-131)||(36528851-36528920)
chr3 (46-93)||(6156732-6156779)
chr3 (46-115)||(5215647-5215716)
chr3 (46-111)||(14520450-14520515)
chr3 (46-138)||(18699413-18699506)
chr3 (59-166)||(14250078-14250185)
chr3 (46-164)||(43888738-43888856)
chr3 (62-115)||(16979912-16979965)
chr3 (63-115)||(22652773-22652825)
chr3 (46-93)||(2841489-2841536)
chr3 (62-131)||(3263962-3264031)
chr3 (62-115)||(14152398-14152451)
chr3 (58-115)||(22841274-22841331)
chr3 (113-185)||(45530652-45530725)
chr3 (59-115)||(29907639-29907695)
chr3 (59-115)||(29948805-29948861)
chr3 (59-115)||(29997959-29998015)
chr3 (58-93)||(12917301-12917336)
chr3 (48-86)||(9707230-9707268)
chr3 (48-86)||(16749559-16749597)
chr3 (48-86)||(19776302-19776340)
chr3 (105-171)||(31223887-31223952)
chr3 (60-93)||(3527154-3527187)
chr3 (58-115)||(6003186-6003242)
chr3 (56-93)||(14442197-14442234)
chr3 (46-83)||(14671813-14671850)
chr3 (58-115)||(45803326-45803383)
chr3 (59-111)||(14641544-14641596)
chr3 (57-93)||(21845646-21845682)
chr3 (138-185)||(22146832-22146880)
[»] scaffold1941 (1 HSPs)
scaffold1941 (46-228)||(25-207)
[»] chr2 (42 HSPs)
chr2 (46-228)||(24516073-24516255)
chr2 (59-228)||(17307373-17307542)
chr2 (63-231)||(5031129-5031297)
chr2 (62-228)||(40912207-40912373)
chr2 (63-228)||(9975816-9975981)
chr2 (63-228)||(24780840-24781005)
chr2 (63-228)||(24436535-24436700)
chr2 (62-228)||(19201199-19201365)
chr2 (63-215)||(22251448-22251600)
chr2 (63-228)||(2523747-2523912)
chr2 (67-228)||(37270587-37270747)
chr2 (100-228)||(27484514-27484642)
chr2 (48-185)||(25142133-25142271)
chr2 (111-228)||(36841151-36841268)
chr2 (46-187)||(1383526-1383667)
chr2 (54-177)||(27852605-27852729)
chr2 (62-187)||(357809-357934)
chr2 (53-185)||(3539766-3539899)
chr2 (59-187)||(22501897-22502027)
chr2 (59-187)||(22509831-22509961)
chr2 (53-163)||(44072509-44072619)
chr2 (56-180)||(22259974-22260097)
chr2 (53-166)||(25046066-25046180)
chr2 (53-166)||(5986125-5986239)
chr2 (46-115)||(21315459-21315528)
chr2 (46-115)||(21335249-21335318)
chr2 (53-185)||(19358820-19358953)
chr2 (56-185)||(18388183-18388312)
chr2 (78-175)||(18390229-18390326)
chr2 (53-164)||(14694276-14694388)
chr2 (62-115)||(21080968-21081021)
chr2 (46-161)||(23068390-23068505)
chr2 (132-186)||(24884399-24884453)
chr2 (62-115)||(25184189-25184242)
chr2 (62-115)||(21915624-21915677)
chr2 (59-111)||(149497-149549)
chr2 (71-115)||(18357975-18358019)
chr2 (46-164)||(9785489-9785607)
chr2 (59-93)||(23801518-23801552)
chr2 (53-83)||(28652542-28652572)
chr2 (62-115)||(23610626-23610679)
chr2 (59-115)||(21369293-21369349)
[»] scaffold0241 (2 HSPs)
scaffold0241 (46-228)||(3069-3251)
scaffold0241 (121-228)||(2451-2558)
[»] chr7 (75 HSPs)
chr7 (46-228)||(14180381-14180563)
chr7 (63-228)||(12465260-12465425)
chr7 (46-228)||(20214034-20214216)
chr7 (46-228)||(20586239-20586421)
chr7 (63-228)||(20620173-20620338)
chr7 (63-228)||(12372161-12372326)
chr7 (63-228)||(13147472-13147637)
chr7 (53-228)||(46386078-46386253)
chr7 (63-228)||(8851159-8851324)
chr7 (63-228)||(12322930-12323095)
chr7 (59-228)||(12127159-12127328)
chr7 (63-228)||(11067355-11067520)
chr7 (63-228)||(32433589-32433754)
chr7 (63-228)||(16999320-16999488)
chr7 (67-228)||(10277215-10277375)
chr7 (58-228)||(24269942-24270112)
chr7 (53-185)||(48807315-48807448)
chr7 (53-175)||(14218885-14219008)
chr7 (56-185)||(15095630-15095759)
chr7 (53-187)||(47974810-47974944)
chr7 (46-185)||(13698621-13698761)
chr7 (56-185)||(8135231-8135359)
chr7 (53-185)||(15140143-15140275)
chr7 (53-175)||(35771431-35771554)
chr7 (63-223)||(33002053-33002205)
chr7 (53-184)||(15623950-15624080)
chr7 (67-192)||(25943041-25943166)
chr7 (53-175)||(4071759-4071882)
chr7 (53-167)||(12754602-12754716)
chr7 (63-163)||(16078281-16078382)
chr7 (59-125)||(44374833-44374899)
chr7 (59-125)||(44383698-44383764)
chr7 (46-185)||(13132319-13132443)
chr7 (53-144)||(10658841-10658932)
chr7 (61-183)||(12557853-12557975)
chr7 (53-167)||(15289052-15289167)
chr7 (67-133)||(13744662-13744728)
chr7 (62-115)||(4690662-4690715)
chr7 (53-164)||(36704561-36704673)
chr7 (53-185)||(11054642-11054775)
chr7 (46-135)||(14928272-14928362)
chr7 (46-135)||(15351738-15351828)
chr7 (46-115)||(708412-708481)
chr7 (46-115)||(3287744-3287813)
chr7 (46-115)||(18874648-18874717)
chr7 (46-164)||(32302177-32302296)
chr7 (46-164)||(14259346-14259463)
chr7 (52-115)||(20252171-20252234)
chr7 (49-115)||(15575635-15575701)
chr7 (62-115)||(29052181-29052234)
chr7 (46-115)||(47095452-47095521)
chr7 (59-115)||(19195611-19195667)
chr7 (103-183)||(41284963-41285043)
chr7 (60-115)||(16250219-16250274)
chr7 (53-115)||(18955330-18955392)
chr7 (62-115)||(16550004-16550057)
chr7 (62-115)||(16615605-16615658)
chr7 (62-171)||(36685145-36685253)
chr7 (59-115)||(38299748-38299804)
chr7 (63-115)||(43276744-43276796)
chr7 (46-93)||(14318094-14318141)
chr7 (185-228)||(25942358-25942401)
chr7 (53-111)||(8488084-8488142)
chr7 (53-111)||(8513743-8513801)
chr7 (63-109)||(18074647-18074693)
chr7 (53-115)||(18990847-18990909)
chr7 (62-156)||(30820150-30820243)
chr7 (53-115)||(32160190-32160252)
chr7 (62-115)||(43745656-43745709)
chr7 (59-93)||(58409-58443)
chr7 (59-133)||(13315078-13315152)
chr7 (59-93)||(13744506-13744540)
chr7 (46-83)||(16580649-16580686)
chr7 (46-83)||(20488368-20488405)
chr7 (63-115)||(19283056-19283108)
[»] chr6 (40 HSPs)
chr6 (46-228)||(15890695-15890877)
chr6 (63-228)||(7827859-7828024)
chr6 (63-228)||(19655231-19655396)
chr6 (63-228)||(23150287-23150452)
chr6 (63-228)||(27125477-27125642)
chr6 (63-228)||(18703451-18703620)
chr6 (63-228)||(18709386-18709555)
chr6 (62-213)||(27329980-27330131)
chr6 (62-213)||(27390720-27390871)
chr6 (57-163)||(24267801-24267907)
chr6 (46-181)||(18928614-18928750)
chr6 (58-224)||(19235015-19235180)
chr6 (56-223)||(28948466-28948634)
chr6 (56-187)||(18585733-18585864)
chr6 (58-224)||(30673397-30673556)
chr6 (58-224)||(19167848-19167998)
chr6 (63-181)||(19401028-19401146)
chr6 (53-167)||(31731894-31732009)
chr6 (53-185)||(23501601-23501734)
chr6 (63-138)||(27572122-27572198)
chr6 (62-124)||(15998880-15998942)
chr6 (62-166)||(24550167-24550271)
chr6 (46-164)||(19772649-19772767)
chr6 (53-115)||(12041610-12041672)
chr6 (46-160)||(22806694-22806808)
chr6 (62-115)||(15173452-15173505)
chr6 (59-115)||(23658089-23658145)
chr6 (67-107)||(29625191-29625231)
chr6 (46-100)||(15704547-15704601)
chr6 (153-218)||(18259262-18259328)
chr6 (46-83)||(2077232-2077269)
chr6 (62-115)||(15900653-15900706)
chr6 (46-86)||(27324695-27324735)
chr6 (56-115)||(18982572-18982631)
chr6 (46-93)||(32259867-32259914)
chr6 (59-93)||(10446239-10446273)
chr6 (48-86)||(16624833-16624871)
chr6 (62-115)||(21683074-21683127)
chr6 (59-115)||(13285748-13285804)
chr6 (59-115)||(19825482-19825538)
[»] chr4 (46 HSPs)
chr4 (46-228)||(15115109-15115291)
chr4 (63-228)||(25091540-25091705)
chr4 (63-233)||(11425825-11425995)
chr4 (63-228)||(53630474-53630639)
chr4 (46-224)||(37019561-37019739)
chr4 (63-228)||(10356436-10356601)
chr4 (63-228)||(42875684-42875849)
chr4 (63-228)||(16998412-16998577)
chr4 (63-228)||(19610211-19610376)
chr4 (67-228)||(6633541-6633701)
chr4 (67-228)||(46001535-46001695)
chr4 (46-183)||(9924085-9924223)
chr4 (46-180)||(14549695-14549829)
chr4 (46-176)||(19434542-19434672)
chr4 (46-185)||(9870427-9870568)
chr4 (46-181)||(11478636-11478772)
chr4 (53-166)||(21144-21258)
chr4 (62-144)||(15613061-15613143)
chr4 (53-144)||(51993532-51993623)
chr4 (150-216)||(26921708-26921774)
chr4 (46-115)||(16296938-16297007)
chr4 (62-115)||(2424386-2424439)
chr4 (46-115)||(14631135-14631204)
chr4 (63-115)||(35811376-35811428)
chr4 (62-119)||(14186955-14187011)
chr4 (62-115)||(15008963-15009016)
chr4 (62-162)||(21062593-21062694)
chr4 (46-164)||(15011453-15011571)
chr4 (62-115)||(40620532-40620585)
chr4 (59-115)||(9639010-9639066)
chr4 (59-115)||(25513851-25513907)
chr4 (56-93)||(9622511-9622548)
chr4 (63-115)||(10694245-10694297)
chr4 (63-115)||(10908011-10908063)
chr4 (63-115)||(12424290-12424342)
chr4 (53-113)||(32466184-32466244)
chr4 (59-93)||(10273405-10273439)
chr4 (62-100)||(14186067-14186105)
chr4 (48-86)||(15225581-15225619)
chr4 (57-115)||(15239810-15239868)
chr4 (153-218)||(27028642-27028708)
chr4 (59-93)||(40230328-40230362)
chr4 (152-185)||(9638939-9638972)
chr4 (56-93)||(12623338-12623375)
chr4 (46-83)||(18023041-18023078)
chr4 (60-93)||(55583218-55583251)
[»] chr1 (40 HSPs)
chr1 (46-228)||(42912936-42913118)
chr1 (63-228)||(19676598-19676763)
chr1 (63-228)||(21046049-21046214)
chr1 (59-228)||(16058310-16058478)
chr1 (63-228)||(20633631-20633799)
chr1 (56-223)||(51324396-51324563)
chr1 (46-187)||(7051905-7052046)
chr1 (53-167)||(13302849-13302964)
chr1 (56-187)||(24723344-24723475)
chr1 (58-224)||(21168825-21168990)
chr1 (46-212)||(4595836-4595995)
chr1 (58-185)||(7320589-7320716)
chr1 (54-185)||(22350646-22350777)
chr1 (53-144)||(21239039-21239130)
chr1 (53-166)||(42697732-42697846)
chr1 (62-115)||(51336479-51336532)
chr1 (62-115)||(12327742-12327795)
chr1 (63-187)||(44822021-44822145)
chr1 (46-115)||(50544872-50544941)
chr1 (53-166)||(45755468-45755582)
chr1 (62-115)||(29763631-29763684)
chr1 (62-115)||(46197744-46197797)
chr1 (67-133)||(45499374-45499439)
chr1 (62-115)||(50001476-50001529)
chr1 (59-115)||(28476730-28476786)
chr1 (63-115)||(22145666-22145718)
chr1 (59-115)||(38056668-38056724)
chr1 (60-111)||(635001-635052)
chr1 (58-93)||(7703144-7703179)
chr1 (59-133)||(8306588-8306662)
chr1 (103-164)||(11946391-11946453)
chr1 (61-115)||(17901792-17901846)
chr1 (48-86)||(39243662-39243700)
chr1 (48-86)||(39247217-39247255)
chr1 (152-185)||(8276079-8276112)
chr1 (62-99)||(24727383-24727420)
chr1 (152-185)||(38056762-38056795)
chr1 (59-115)||(12710867-12710923)
chr1 (121-168)||(14801337-14801384)
chr1 (121-168)||(14810211-14810258)
[»] scaffold0334 (1 HSPs)
scaffold0334 (49-228)||(405-584)
[»] scaffold0207 (1 HSPs)
scaffold0207 (53-228)||(13382-13557)
[»] chr8 (58 HSPs)
chr8 (46-237)||(20083621-20083812)
chr8 (73-228)||(5082222-5082377)
chr8 (62-228)||(5761421-5761586)
chr8 (63-228)||(42817907-42818072)
chr8 (53-228)||(6101743-6101918)
chr8 (63-221)||(19140659-19140816)
chr8 (67-228)||(6573060-6573221)
chr8 (63-228)||(39936007-39936175)
chr8 (67-228)||(37292593-37292753)
chr8 (67-228)||(6202664-6202824)
chr8 (58-217)||(20397505-20397656)
chr8 (46-231)||(31722476-31722661)
chr8 (116-237)||(20178581-20178704)
chr8 (56-223)||(22532125-22532292)
chr8 (56-223)||(22536810-22536977)
chr8 (53-185)||(45469209-45469342)
chr8 (53-175)||(36727028-36727151)
chr8 (56-185)||(22317904-22318033)
chr8 (53-167)||(17906839-17906953)
chr8 (59-185)||(20022036-20022155)
chr8 (62-223)||(39694276-39694437)
chr8 (53-175)||(23899977-23900100)
chr8 (62-115)||(4380616-4380669)
chr8 (53-166)||(19700109-19700223)
chr8 (53-166)||(23948211-23948325)
chr8 (62-144)||(23419411-23419494)
chr8 (56-185)||(42265502-42265631)
chr8 (63-167)||(17218649-17218754)
chr8 (53-130)||(22583650-22583727)
chr8 (53-130)||(23889784-23889861)
chr8 (63-115)||(18761448-18761500)
chr8 (53-139)||(22254741-22254828)
chr8 (67-133)||(36305837-36305903)
chr8 (46-115)||(18816278-18816347)
chr8 (62-115)||(26454708-26454761)
chr8 (62-100)||(17158962-17159000)
chr8 (62-100)||(23479097-23479135)
chr8 (62-99)||(19880838-19880875)
chr8 (58-111)||(22610262-22610315)
chr8 (59-115)||(22208269-22208325)
chr8 (67-107)||(34758875-34758915)
chr8 (60-115)||(25657511-25657566)
chr8 (61-185)||(3273819-3273944)
chr8 (55-93)||(21399739-21399777)
chr8 (55-93)||(21794232-21794270)
chr8 (62-115)||(12577880-12577932)
chr8 (62-100)||(16198851-16198889)
chr8 (59-93)||(22345186-22345220)
chr8 (59-93)||(22356846-22356880)
chr8 (62-124)||(36732411-36732473)
chr8 (56-118)||(44522172-44522233)
chr8 (56-93)||(22474778-22474815)
chr8 (58-111)||(22483942-22483994)
chr8 (50-83)||(23914912-23914945)
chr8 (56-93)||(36405125-36405162)
chr8 (63-111)||(21514695-21514743)
chr8 (67-115)||(22483786-22483834)
chr8 (63-103)||(23943826-23943866)
[»] scaffold0026 (1 HSPs)
scaffold0026 (53-228)||(146610-146785)
[»] scaffold1283 (1 HSPs)
scaffold1283 (63-228)||(468-633)
[»] scaffold1766 (1 HSPs)
scaffold1766 (62-228)||(695-861)
[»] scaffold0020 (2 HSPs)
scaffold0020 (62-228)||(168998-169164)
scaffold0020 (49-228)||(143498-143677)
[»] scaffold1633 (1 HSPs)
scaffold1633 (63-228)||(1092-1257)
[»] scaffold0737 (2 HSPs)
scaffold0737 (63-228)||(4714-4879)
scaffold0737 (67-185)||(5821-5941)
[»] scaffold0407 (1 HSPs)
scaffold0407 (63-228)||(11274-11439)
[»] scaffold0064 (1 HSPs)
scaffold0064 (63-228)||(58633-58798)
[»] scaffold0001 (4 HSPs)
scaffold0001 (59-228)||(77574-77743)
scaffold0001 (63-228)||(31881-32046)
scaffold0001 (63-228)||(37188-37353)
scaffold0001 (56-130)||(152104-152177)
[»] scaffold0111 (2 HSPs)
scaffold0111 (66-228)||(5270-5432)
scaffold0111 (59-223)||(12529-12693)
[»] scaffold0077 (2 HSPs)
scaffold0077 (63-228)||(34226-34391)
scaffold0077 (62-144)||(5921-6003)
[»] chr5 (30 HSPs)
chr5 (59-228)||(21300040-21300209)
chr5 (67-214)||(7484903-7485050)
chr5 (46-224)||(20566445-20566615)
chr5 (73-228)||(19921525-19921680)
chr5 (59-212)||(31622028-31622173)
chr5 (46-187)||(36508616-36508757)
chr5 (53-181)||(21617918-21618047)
chr5 (53-167)||(20469166-20469281)
chr5 (62-187)||(31456888-31457013)
chr5 (53-115)||(6551280-6551342)
chr5 (67-181)||(22111762-22111876)
chr5 (62-166)||(10954038-10954142)
chr5 (62-171)||(10774663-10774771)
chr5 (53-115)||(18744874-18744936)
chr5 (53-185)||(21405618-21405751)
chr5 (62-115)||(17011728-17011781)
chr5 (66-115)||(30616614-30616663)
chr5 (63-115)||(266038-266090)
chr5 (59-186)||(17876132-17876259)
chr5 (53-144)||(25249818-25249910)
chr5 (53-144)||(25313602-25313694)
chr5 (103-183)||(31251931-31252011)
chr5 (58-111)||(16063755-16063808)
chr5 (167-216)||(22111715-22111764)
chr5 (63-115)||(23199207-23199259)
chr5 (148-187)||(30138059-30138098)
chr5 (48-86)||(10753867-10753905)
chr5 (59-93)||(32607312-32607346)
chr5 (62-115)||(29448840-29448893)
chr5 (67-111)||(1627071-1627115)
[»] scaffold0632 (1 HSPs)
scaffold0632 (62-228)||(1052-1218)
[»] scaffold0004 (6 HSPs)
scaffold0004 (62-228)||(328287-328455)
scaffold0004 (67-216)||(75691-75834)
scaffold0004 (71-218)||(72841-72980)
scaffold0004 (67-167)||(110121-110222)
scaffold0004 (63-133)||(73069-73139)
scaffold0004 (53-93)||(111382-111422)
[»] scaffold0149 (2 HSPs)
scaffold0149 (49-202)||(29559-29711)
scaffold0149 (53-187)||(21539-21673)
[»] scaffold0080 (1 HSPs)
scaffold0080 (63-228)||(21793-21958)
[»] scaffold0113 (1 HSPs)
scaffold0113 (46-189)||(35418-35559)
[»] scaffold0285 (1 HSPs)
scaffold0285 (58-224)||(19652-19810)
[»] scaffold0036 (1 HSPs)
scaffold0036 (63-176)||(78185-78298)
[»] scaffold0019 (2 HSPs)
scaffold0019 (63-167)||(24131-24235)
scaffold0019 (46-163)||(30023-30140)
[»] scaffold0047 (1 HSPs)
scaffold0047 (63-224)||(78955-79101)
[»] scaffold0037 (3 HSPs)
scaffold0037 (53-223)||(112956-113127)
scaffold0037 (63-181)||(81501-81619)
scaffold0037 (53-223)||(117797-117960)
[»] scaffold0802 (1 HSPs)
scaffold0802 (46-183)||(4692-4830)
[»] scaffold0112 (1 HSPs)
scaffold0112 (58-224)||(2787-2946)
[»] scaffold0956 (1 HSPs)
scaffold0956 (59-146)||(2524-2611)
[»] scaffold0040 (1 HSPs)
scaffold0040 (46-187)||(106034-106175)
[»] scaffold0230 (1 HSPs)
scaffold0230 (56-187)||(6678-6809)
[»] scaffold0083 (3 HSPs)
scaffold0083 (62-223)||(10754-10913)
scaffold0083 (62-138)||(5044-5120)
scaffold0083 (62-115)||(1937-1990)
[»] scaffold0175 (2 HSPs)
scaffold0175 (53-185)||(8571-8704)
scaffold0175 (106-218)||(18744-18856)
[»] scaffold0174 (4 HSPs)
scaffold0174 (67-218)||(5167-5310)
scaffold0174 (67-218)||(11287-11430)
scaffold0174 (67-217)||(19605-19754)
scaffold0174 (59-115)||(5454-5510)
[»] scaffold0100 (1 HSPs)
scaffold0100 (58-214)||(26629-26779)
[»] scaffold0008 (1 HSPs)
scaffold0008 (52-184)||(135493-135625)
[»] scaffold0156 (1 HSPs)
scaffold0156 (69-187)||(16532-16650)
[»] scaffold0628 (1 HSPs)
scaffold0628 (59-231)||(1054-1226)
[»] scaffold0028 (1 HSPs)
scaffold0028 (53-185)||(3042-3174)
[»] scaffold0056 (2 HSPs)
scaffold0056 (55-175)||(67060-67181)
scaffold0056 (62-115)||(18275-18328)
[»] scaffold0379 (1 HSPs)
scaffold0379 (67-180)||(10741-10846)
[»] scaffold0251 (1 HSPs)
scaffold0251 (53-180)||(20076-20202)
[»] scaffold0123 (1 HSPs)
scaffold0123 (62-185)||(7205-7330)
[»] scaffold0848 (1 HSPs)
scaffold0848 (63-185)||(2021-2143)
[»] scaffold0075 (1 HSPs)
scaffold0075 (53-166)||(60843-60957)
[»] scaffold0010 (1 HSPs)
scaffold0010 (53-166)||(126295-126407)
[»] scaffold0220 (3 HSPs)
scaffold0220 (53-164)||(19905-20016)
scaffold0220 (59-115)||(13949-14005)
scaffold0220 (152-185)||(13878-13911)
[»] scaffold0203 (1 HSPs)
scaffold0203 (59-115)||(17936-17992)
[»] scaffold0213 (1 HSPs)
scaffold0213 (59-115)||(19207-19263)
[»] scaffold0032 (1 HSPs)
scaffold0032 (59-115)||(61844-61900)
[»] scaffold0003 (1 HSPs)
scaffold0003 (58-166)||(96347-96455)
[»] scaffold0256 (1 HSPs)
scaffold0256 (62-133)||(1846-1917)
[»] scaffold0007 (3 HSPs)
scaffold0007 (56-190)||(158815-158949)
scaffold0007 (58-111)||(18696-18749)
scaffold0007 (56-115)||(16412-16471)
[»] scaffold0671 (1 HSPs)
scaffold0671 (53-166)||(4888-5002)
[»] scaffold0589 (1 HSPs)
scaffold0589 (53-166)||(4333-4447)
[»] scaffold0002 (1 HSPs)
scaffold0002 (53-166)||(398510-398624)
[»] scaffold1256 (1 HSPs)
scaffold1256 (62-115)||(2199-2252)
[»] scaffold0071 (1 HSPs)
scaffold0071 (62-115)||(15272-15325)
[»] scaffold0041 (1 HSPs)
scaffold0041 (68-117)||(5712-5761)
[»] scaffold0819 (1 HSPs)
scaffold0819 (61-171)||(5311-5420)
[»] scaffold0261 (1 HSPs)
scaffold0261 (150-216)||(6620-6686)
[»] scaffold0042 (1 HSPs)
scaffold0042 (53-162)||(29340-29450)
[»] scaffold1186 (1 HSPs)
scaffold1186 (46-115)||(2020-2089)
[»] scaffold0577 (1 HSPs)
scaffold0577 (62-171)||(9004-9112)
[»] scaffold0516 (1 HSPs)
scaffold0516 (62-111)||(5304-5353)
[»] scaffold0205 (1 HSPs)
scaffold0205 (46-162)||(30607-30723)
[»] scaffold0065 (1 HSPs)
scaffold0065 (62-166)||(52543-52648)
[»] scaffold0005 (1 HSPs)
scaffold0005 (46-115)||(186179-186248)
[»] scaffold0439 (1 HSPs)
scaffold0439 (107-186)||(12323-12403)
[»] scaffold0859 (1 HSPs)
scaffold0859 (78-185)||(4612-4718)
[»] scaffold0411 (1 HSPs)
scaffold0411 (53-151)||(13407-13505)
[»] scaffold0017 (1 HSPs)
scaffold0017 (56-115)||(26727-26786)
[»] scaffold0151 (1 HSPs)
scaffold0151 (53-178)||(31046-31170)
[»] scaffold0116 (1 HSPs)
scaffold0116 (56-185)||(35457-35586)
[»] scaffold0594 (1 HSPs)
scaffold0594 (46-115)||(2247-2316)
[»] scaffold0515 (1 HSPs)
scaffold0515 (62-115)||(5029-5082)
[»] scaffold0436 (1 HSPs)
scaffold0436 (62-115)||(8960-9013)
[»] scaffold0306 (1 HSPs)
scaffold0306 (62-115)||(5029-5082)
[»] scaffold0292 (1 HSPs)
scaffold0292 (46-166)||(7504-7624)
[»] scaffold0138 (2 HSPs)
scaffold0138 (62-115)||(21097-21150)
scaffold0138 (62-115)||(34112-34165)
[»] scaffold0057 (1 HSPs)
scaffold0057 (62-115)||(69852-69905)
[»] scaffold0034 (2 HSPs)
scaffold0034 (48-164)||(120905-121021)
scaffold0034 (62-115)||(29215-29268)
[»] scaffold0630 (1 HSPs)
scaffold0630 (46-93)||(9085-9132)
[»] scaffold0180 (1 HSPs)
scaffold0180 (63-185)||(28329-28451)
[»] scaffold0098 (1 HSPs)
scaffold0098 (46-93)||(40129-40176)
[»] scaffold0096 (1 HSPs)
scaffold0096 (46-163)||(22050-22166)
[»] scaffold0601 (1 HSPs)
scaffold0601 (63-100)||(196-233)
[»] scaffold0018 (1 HSPs)
scaffold0018 (46-138)||(21671-21764)
[»] scaffold0676 (1 HSPs)
scaffold0676 (59-115)||(2881-2937)
[»] scaffold0625 (1 HSPs)
scaffold0625 (53-115)||(5851-5913)
[»] scaffold0308 (1 HSPs)
scaffold0308 (56-185)||(13370-13499)
[»] scaffold0058 (1 HSPs)
scaffold0058 (62-100)||(6383-6421)
[»] scaffold0046 (1 HSPs)
scaffold0046 (62-100)||(21776-21814)
[»] scaffold0048 (1 HSPs)
scaffold0048 (56-93)||(68719-68756)
[»] scaffold0878 (1 HSPs)
scaffold0878 (59-115)||(3418-3474)
[»] scaffold0853 (1 HSPs)
scaffold0853 (63-115)||(2454-2506)
[»] scaffold0431 (1 HSPs)
scaffold0431 (63-115)||(5633-5685)
[»] scaffold0061 (2 HSPs)
scaffold0061 (59-115)||(14582-14638)
scaffold0061 (59-115)||(23640-23696)
[»] scaffold0452 (1 HSPs)
scaffold0452 (46-164)||(12605-12723)
[»] scaffold0139 (1 HSPs)
scaffold0139 (58-93)||(40156-40191)
[»] scaffold0108 (1 HSPs)
scaffold0108 (56-115)||(6418-6477)
[»] scaffold0011 (2 HSPs)
scaffold0011 (46-164)||(126742-126860)
scaffold0011 (56-93)||(33476-33513)
[»] scaffold1128 (1 HSPs)
scaffold1128 (103-164)||(448-510)
[»] scaffold0328 (2 HSPs)
scaffold0328 (59-93)||(18636-18670)
scaffold0328 (152-185)||(18731-18764)
[»] scaffold0231 (1 HSPs)
scaffold0231 (53-115)||(17511-17573)
[»] scaffold0043 (2 HSPs)
scaffold0043 (63-164)||(27928-28029)
scaffold0043 (63-138)||(42811-42887)
[»] scaffold0031 (1 HSPs)
scaffold0031 (59-93)||(127339-127373)
[»] scaffold1800 (1 HSPs)
scaffold1800 (56-93)||(629-666)
[»] scaffold1434 (1 HSPs)
scaffold1434 (58-115)||(1354-1410)
[»] scaffold0462 (1 HSPs)
scaffold0462 (62-115)||(11223-11276)
[»] scaffold0104 (2 HSPs)
scaffold0104 (62-115)||(14957-15010)
scaffold0104 (62-115)||(16977-17030)
[»] scaffold0394 (1 HSPs)
scaffold0394 (58-94)||(7509-7545)


Alignment Details
Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 46 - 228
Target Start/End: Complemental strand, 40808065 - 40807883
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40808065 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 40807966  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40807965 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 40807883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 53 - 228
Target Start/End: Complemental strand, 40812895 - 40812720
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaat 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40812895 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgcataattctgaaattgagtttagcatgttgtaggttgtagttatgggaat 40812796  T
Q  153 ttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40812795 ttgggaattaggttttgaagttgtaattgattgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 40812720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 46 - 228
Target Start/End: Complemental strand, 44274487 - 44274305
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44274487 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 44274388  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  44274387 tgggaatttgggaattatattttgaagttgtaattggttgttaatagagtagaaaattcattgaatttgtgtagaattgatgt 44274305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 59 - 237
Target Start/End: Complemental strand, 49900786 - 49900608
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 158  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49900786 aatctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 49900687  T
Q  159 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtccatctcat 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  49900686 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgttcatatcat 49900608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 17045018 - 17044853
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17045018 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 17044919  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  17044918 ggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaattgatgt 17044853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 17518869 - 17519038
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 158  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  17518869 aatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtaggttgtagttatgggaatttggga 17518968  T
Q  159 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17518969 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17519038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 17533731 - 17533900
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 158  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  17533731 aatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtaggttgtagttatgggaatttggga 17533830  T
Q  159 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17533831 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17533900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 46 - 228
Target Start/End: Complemental strand, 10563777 - 10563596
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  10563777 tccttcgtcgatcaatctaaggtaatggtgggactaactttctctaattttaagttgtataattatgaaattgagtttagcatgttgtagtttgtagtta 10563678  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  10563677 tggaaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaagccgttgaatttg-gtagaattgatgt 10563596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 17047178 - 17047013
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  17047178 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatttgaatttgggaatta 17047079  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
     ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17047078 agttttgaagttgtaattggttgttaatagagtaaaaaatccgttgaatttgtgtagaattgatgt 17047013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 63 - 216
Target Start/End: Original strand, 22306583 - 22306736
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22306583 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgtgaatta 22306682  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22306683 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 22306736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 41172371 - 41172534
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41172371 taaggtaagggtgggactaactttctctacttataagttgtataactctgaaattgagtttagcatgttgtaggttgtagttatgggaattagggaatta 41172470  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgat 226  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  41172471 ggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaattgat 41172534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 78 - 228
Target Start/End: Original strand, 50348041 - 50348191
Alignment:
Q  78 actaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgta 177  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50348041 actaactttctctaattctaagttgtataattttaaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgta 50348140  T
Q  178 attggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50348141 attggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 50348191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 11259483 - 11259318
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||    
T  11259483 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgaatttagcatgttgtagattgtagttatgagaatttgggaatta 11259384  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||    
T  11259383 ggttttgaagttgtaattgattgttaataaagtagaaaatccgttgaatttgtgtagaagtgatgt 11259318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 17539158 - 17538993
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  17539158 taaggtaagggtgagactaactttatctaattctaagttgtataattctgaaattgattttatcatgttgtaggttgtagttatgggaatttggaaatta 17539059  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17539058 ggttttgaagatgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 17538993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 67 - 228
Target Start/End: Complemental strand, 17694115 - 17693954
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 166  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| ||    
T  17694115 gtaagggtgagactaactttctctaattctaagttgtataattctaaaattgagtttagcatgttgtaggttgtagttatggaaatttgtgaattagatt 17694016  T
Q  167 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  17694015 ttgaagttgtaattgatcgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17693954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 35354654 - 35354489
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  35354654 taagctaagtgtgggactaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgttggttgtagttatgggaatttggaaatta 35354555  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||    
T  35354554 ggttttgaagttgtaattgattgttggtagagtagaaaatccgttgaatttgtgtagaattgatgt 35354489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 67 - 228
Target Start/End: Complemental strand, 10311575 - 10311415
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 166  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  10311575 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 10311476  T
Q  167 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  10311475 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 10311415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 15931508 - 15931672
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||||||| |||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||| |||||| |||||||    
T  15931508 taaggtaaaggtgagactaactttctctaattctaagt-gtataattctgaaatagagtttagcatgttttaggttgtagttatgagaattttggaatta 15931606  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||| ||||||||||||  || ||||||||||||||||| |||||||||||||||||||||||||    
T  15931607 ggtttcgaagttgtaattaattattaatagagtagaaaattcgttgaatttgtgtagaattgatgt 15931672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 19568191 - 19568368
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |   |||| || ||||||||||||||||     
T  19568191 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactagatttaacaggttgtaggttgtagttt 19568290  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 223  Q
    ||||||||||||||||||| || ||||||||||||||| |||   | |||||| ||||||||||||  ||||||||||    
T  19568291 tgggaatttgggaattagggttagaagttgtaattggtagttgtaatagtagagaatccgttgaatcggtgtagaatt 19568368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 14508896 - 14508749
Alignment:
Q  66 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 165  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  14508896 ggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgaggttagcatgttgtaggttgtagttatgggaattttggaattaggt 14508797  T
Q  166 ttt-gaagttgtaattggttgttaatagagtagaaaatccgttgaatt 212  Q
    ||| ||||||||||||||||||  | |||||||| |||| | ||||||    
T  14508796 tttggaagttgtaattggttgtagaaagagtagataatctgatgaatt 14508749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 46 - 183
Target Start/End: Complemental strand, 33565156 - 33565018
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| || ||||||||||| ||||    
T  33565156 tccttcgtcgatcaatctaaggtaagggtgtgactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagtt 33565057  T
Q  145 atgggaatttgggaattaggttttgaagttgtaattggt 183  Q
     ||||||||||| |||||||||| |||||||||||||||    
T  33565056 ttgggaatttggaaattaggtttagaagttgtaattggt 33565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 46 - 183
Target Start/End: Original strand, 35960911 - 35961049
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||| ||||||| |||| || ||||||||||| ||||    
T  35960911 tccttcgtcgatcaatctaaggtaagggtgggattaactttctctaattctatgtggtataattctgaaaattgaatttaacaagttgtaggttgaagtt 35961010  T
Q  145 atgggaatttgggaattaggttttgaagttgtaattggt 183  Q
     ||| ||||||| |||||||||| |||||||||||||||    
T  35961011 ttggaaatttggaaattaggtttagaagttgtaattggt 35961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 35064566 - 35064658
Alignment:
Q  88 tctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaatt 180  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35064566 tctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattaggttttgaagttgtaatt 35064658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 42323954 - 42324094
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    |||||||||||||| ||||||||||||||||||||||| || | ||||| ||||||||||||||||| ||||||| |||  |||||||||||||||||||    
T  42323954 tccttcgtcgatcagtctaaggtaagggtgggactaacattatttaattttaagttgtataattctgaaaattgaatttgacatgttgtaggttgtagtt 42324053  T
Q  145 atgggaatttgggaattaggttttgaagttgtaattggttg 185  Q
     ||||||||||| ||||||| || |||||||||||||||||    
T  42324054 ttgggaatttggaaattagggttagaagttgtaattggttg 42324094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 56 - 223
Target Start/End: Original strand, 9510909 - 9511076
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttg 155  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||| |||||||| ||||||||||    
T  9510909 atcaatctaaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttg 9511008  T
Q  156 ggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 223  Q
     ||||||||||| |||||||||||||||||||   | ||||||||||| ||||| || || |||||||    
T  9511009 agaattaggtttagaagttgtaattggttgttttaatagtagaaaatctgttgatttcgtttagaatt 9511076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 56 - 223
Target Start/End: Original strand, 9518884 - 9519051
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttg 155  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||| |||||||| ||||||||||    
T  9518884 atcaatctaaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttg 9518983  T
Q  156 ggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 223  Q
     ||||||||||| |||||||||||||||||||   | ||||||||||| ||||| || || |||||||    
T  9518984 agaattaggtttagaagttgtaattggttgttttaatagtagaaaatctgttgatttcgtttagaatt 9519051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 59 - 185
Target Start/End: Complemental strand, 11563781 - 11563654
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggg 157  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||  | |||| || |||||||||||||||| ||||||||||||    
T  11563781 aatctaaggtaagggtgggactaaccttctctaattctaagtggtataattctgaaaatcaaatttaacaagttgtaggttgtagttttgggaatttggg 11563682  T
Q  158 aattaggttttgaagttgtaattggttg 185  Q
    ||||||||||  ||||||||||||||||    
T  11563681 aattaggtttaaaagttgtaattggttg 11563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 53 - 175
Target Start/End: Complemental strand, 13185957 - 13185834
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattct-gaaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  |||| || |||| || |||||||||||||||| ||| ||    
T  13185957 tcgatcaatctaaggtaagggtgggactaactttctctaattttaagtgatataattctaaaaatcgaatttaacaagttgtaggttgtagttttggaaa 13185858  T
Q  152 tttgggaattaggttttgaagttg 175  Q
    |||||||||||||||| |||||||    
T  13185857 tttgggaattaggtttagaagttg 13185834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 16050989 - 16050875
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaat 152  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| || |||||| ||||||||| || | ||    
T  16050989 tcgattaacctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaacaagttgtatgttgtagttttgaggat 16050890  T
Q  153 ttgggaattaggttt 167  Q
    ||| |||||||||||    
T  16050889 ttgagaattaggttt 16050875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 17541486 - 17541423
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagc 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17541486 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagc 17541423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 35064681 - 35064745
Alignment:
Q  164 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35064681 gttttgaagttgtaattggttgttaatatagtagaaaatccgttgaatttgtgtagaattgatgt 35064745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 185
Target Start/End: Original strand, 49968859 - 49968981
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    ||||||||| ||||||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || ||||||| |||||||| || |||||||||||||    
T  49968859 taaggtaagagtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtagcttgtagttttgagaatttgggaatt 49968957  T
Q  162 aggttttgaagttgtaattggttg 185  Q
    ||||||  ||||||||||||||||    
T  49968958 aggtttataagttgtaattggttg 49968981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 5200277 - 5200335
Alignment:
Q  170 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5200277 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5200335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 167
Target Start/End: Original strand, 24177735 - 24177840
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||  ||||  | || ||||||||||||| ||| ||||||||||||    
T  24177735 ctaaggtaagggtgggacaaactttctctaattataagttgtataattctgaaactggatttaataggtggtaggttgtagttttggaaatttgggaatt 24177834  T
Q  162 aggttt 167  Q
    | ||||    
T  24177835 atgttt 24177840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 164
Target Start/End: Original strand, 11885547 - 11885658
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || ||| |||||||||||||||||||||||||||||||||||  |||||||||| ||||||  |||| || |||||||||||||||| ||||||    
T  11885547 tcgattaacctatggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaa 11885645  T
Q  152 tttgggaattagg 164  Q
    |||| ||||||||    
T  11885646 tttgagaattagg 11885658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 104
Target Start/End: Original strand, 5200226 - 5200284
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgta 104  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5200226 tccttcgtcgatccatctaaggtaagggtgggactaactttctctaattctaagttgta 5200284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 15566800 - 15566744
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15566800 aatctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15566744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 185
Target Start/End: Complemental strand, 37039085 - 37038978
Alignment:
Q  80 taactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggg-aattaggttttgaagttgta 177  Q
    |||| |||| ||||| |||||||||||||||||||| |||  |||| ||||||||||||||||||| |||||||||||| ||||||| ||  ||||||||    
T  37039085 taacattctttaattataagttgtataattctgaaaattggatttaacatgttgtaggttgtagttttgggaatttgggaaattagggttaaaagttgta 37038986  T
Q  178 attggttg 185  Q
    ||||||||    
T  37038985 attggttg 37038978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 12509349 - 12509431
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtt 144  Q
    |||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||  |||| ||||| ||||| |||||||    
T  12509349 ctaaggtaagggtgggacaaaccttctttaattctaagttgtataattctgaaattggatttaacatgtggtaggatgtagtt 12509431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 15446867 - 15446920
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15446867 ctaaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15446920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 22758817 - 22758935
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||| |||||||||||| ||||||| |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||||| |||||    
T  22758817 tccttcgtcgatcaatccaaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagtt 22758915  T
Q  145 atgggaatttgggaattagg 164  Q
     || | ||||||||||||||    
T  22758916 ttgaggatttgggaattagg 22758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 17208586 - 17208524
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  17208586 tcgatcaatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 17208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 36528920 - 36528851
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 131  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||||||||| |||| ||||| ||||||    
T  36528920 ctaaggtaagggtgggattaactttctctaattctaagtaatataattctgagattgggtttaacatgtt 36528851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 6156779 - 6156732
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaat 93  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  6156779 tccttcgtcgatcaatctaaggtaagggtgggactagctttctctaat 6156732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 115
Target Start/End: Complemental strand, 5215716 - 5215647
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||| |||||||||||||| |||| |||||||||||  | |||||||||||| |||||    
T  5215716 tccttcgtcgatcaatataaggtaagggtggcactagctttctctaataatgagttgtataattatgaaa 5215647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 14520515 - 14520450
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattct 111  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||  |  |||||||||||||    
T  14520515 tccttcgtcgatcaatctaaggtaagggtgggactagctttctttaataatgggttgtataattct 14520450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 18699413 - 18699506
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggtt 138  Q
    ||||||||||||||||| |||||||||||||||||| | |||  |||||||||||  | |||||||| ||||||  |||| |||||||||||||    
T  18699413 tccttcgtcgatcaatccaaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt 18699506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 166
Target Start/End: Original strand, 14250078 - 14250185
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 158  Q
    |||||| |||||| ||||||||||| |||| |||||||||||||| ||||| | ||||||  |||| ||||||||| | ||||||| |||  ||||  ||    
T  14250078 aatctatggtaagagtgggactaaccttctttaattctaagttgtgtaattttcaaattggatttaacatgttgtaagatgtagttttggagatttaaga 14250177  T
Q  159 attaggtt 166  Q
    ||||||||    
T  14250178 attaggtt 14250185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 43888738 - 43888856
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||| |||||||||||||||||| |  ||  |||||||||||  | |||||||| |||| |  |||| ||||||||||||| |||||    
T  43888738 tccttcgtcgatcaatccaaggtaagggtgggactagccatcaataattctaagtgttttaattctgaaaatggtatttaacatgttgtaggtt-tagtt 43888836  T
Q  145 atgggaatttgggaattagg 164  Q
     || | ||||||||||||||    
T  43888837 ttgaggatttgggaattagg 43888856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 16979965 - 16979912
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||||||| |||||||||||  | |||||||||||    
T  16979965 ctaaggtaagggtgggactaactttctttaattctaagtattttaattctgaaa 16979912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 22652825 - 22652773
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||| ||||||||||||||||||||||||||||  | |||||||||||    
T  22652825 taaggtaagagtgggactaactttctctaattctaagtaatttaattctgaaa 22652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 2841489 - 2841536
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaat 93  Q
    ||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  2841489 tcctttgtcgatcaatctaaggtaagggtgtgactagctttctctaat 2841536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 3263962 - 3264031
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 131  Q
    ||||||||||||| ||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  3263962 ctaaggtaagggtcggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 3264031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 14152398 - 14152451
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||| |||||||||||  | |||||||| |||||||||    
T  14152398 ctaaggtaagggtgggactagctttctctaataatgagttgtatcattctgaaa 14152451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 22841274 - 22841331
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||| ||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  22841274 caatctaatgtaagggtgggactagctttctctaataatgggttgtataattctgaaa 22841331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 45530652 - 45530725
Alignment:
Q  113 aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaa-ttaggttttgaagttgtaattggttg 185  Q
    ||||||| |||| || ||||| |||||||||| |||||||||| ||| ||||| || |||||||||||||||||    
T  45530652 aaattgaatttaacaggttgtgggttgtagttttgggaatttgcgaaattagggttagaagttgtaattggttg 45530725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 29907695 - 29907639
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||| |||||| ||||  |  |||||||||||||||||    
T  29907695 aatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaa 29907639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 29948861 - 29948805
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||| |||||| ||||  |  |||||||||||||||||    
T  29948861 aatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaa 29948805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 29998015 - 29997959
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||| |||||| ||||  |  |||||||||||||||||    
T  29998015 aatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaa 29997959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 93
Target Start/End: Original strand, 12917301 - 12917336
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaat 93  Q
    ||||||||| ||||||||||||||||||||||||||    
T  12917301 caatctaagataagggtgggactaactttctctaat 12917336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 9707230 - 9707268
Alignment:
Q  48 cttcgtcgatcaatctaaggtaagggtgggactaacttt 86  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  9707230 cttcgtcgatcaatccaaggtaagggtgagactaacttt 9707268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 16749559 - 16749597
Alignment:
Q  48 cttcgtcgatcaatctaaggtaagggtgggactaacttt 86  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  16749559 cttcgtcgatcaatccaaggtaagggtgagactaacttt 16749597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 19776340 - 19776302
Alignment:
Q  48 cttcgtcgatcaatctaaggtaagggtgggactaacttt 86  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  19776340 cttcgtcgatcaatccaaggtaagggtgagactaacttt 19776302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 31223887 - 31223952
Alignment:
Q  105 taattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaa 171  Q
    ||||||||||| ||  |||| || |||||||||||||||| | ||||||||||||||||| ||||||    
T  31223887 taattctgaaactggatttaacaggttgtaggttgtagtt-ttggaatttgggaattagggtttgaa 31223952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 3527154 - 3527187
Alignment:
Q  60 atctaaggtaagggtgggactaactttctctaat 93  Q
    |||||||||||||||||||||| |||||||||||    
T  3527154 atctaaggtaagggtgggactagctttctctaat 3527187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 6003242 - 6003186
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||| |||| ||| | | |||| |||||||||||||    
T  6003242 caatctaaggtaagggtgggactaaccttctttaa-tatgagttctataattctgaaa 6003186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 14442234 - 14442197
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaat 93  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  14442234 atcaatctaaggtaagggtgggactagctttctgtaat 14442197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 14671850 - 14671813
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaac 83  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  14671850 tccttcgttgatcaatccaaggtaagggtgggactaac 14671813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 45803326 - 45803383
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||| || |||||||||||| |||||||||||  |  |||||||||||||||||    
T  45803326 caatctaaagttagggtgggactagctttctctaataatgggttgtataattctgaaa 45803383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 14641544 - 14641596
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattct 111  Q
    |||||||||||||||||||| || |||||||||||  |  |||||||||||||    
T  14641544 aatctaaggtaagggtgggattagctttctctaataatgggttgtataattct 14641596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 21845646 - 21845682
Alignment:
Q  57 tcaatctaaggtaagggtgggactaactttctctaat 93  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  21845646 tcaatctaaggtaagggtgggactaaccttctttaat 21845682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 185
Target Start/End: Original strand, 22146832 - 22146880
Alignment:
Q  138 tgtagttatgggaatttgggaa-ttaggttttgaagttgtaattggttg 185  Q
    ||||||| |||||||||||||| ||||| || |||||||||||||||||    
T  22146832 tgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 22146880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 46 - 228
Target Start/End: Complemental strand, 207 - 25
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  207 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagtta 108  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  107 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 25  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 179; Significance: 1e-96; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 46 - 228
Target Start/End: Complemental strand, 24516255 - 24516073
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24516255 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagtta 24516156  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24516155 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 24516073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 17307542 - 17307373
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17307542 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 17307443  T
Q  159 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17307442 attaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 17307373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 5031129 - 5031297
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5031129 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 5031228  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtcca 231  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  5031229 ggttttgaagttgtaattggttgttaatagagtataaaattcgttgaatttgtgtagaagtgatgtcca 5031297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 62 - 228
Target Start/End: Complemental strand, 40912373 - 40912207
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40912373 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 40912274  T
Q  162 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  40912273 aggttttgaagttgtagttggttgttaatagagtagaaaattcgttgaatttgtgtagaaatgatgt 40912207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 9975981 - 9975816
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9975981 taaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 9975882  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  9975881 ggttttgaagttgtaattggttgttaatagagtagacaatccgctgaatttgtgtagaattgatgt 9975816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 24780840 - 24781005
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  24780840 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgaagtaggttgtagttatgggaatttgggaatta 24780939  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24780940 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 24781005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 24436700 - 24436535
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24436700 taagataagggtgggactaactttctcgaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 24436601  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24436600 ggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 24436535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 62 - 228
Target Start/End: Original strand, 19201199 - 19201365
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  19201199 ctaagttaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttatcatgttgtaggttgtagttataggaatttgggaatt 19201298  T
Q  162 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  19201299 aggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgggtagaattgatgt 19201365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 63 - 215
Target Start/End: Original strand, 22251448 - 22251600
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22251448 taaggtaagggtgaaactaattttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 22251547  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgt 215  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22251548 ggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgt 22251600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 2523747 - 2523912
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||| |||||    
T  2523747 taaggtaagggtgggactaactttctctaattctaagttgtataattcttaaattgagtttaacatgttgtaggttgtatttatgggaatttggaaatta 2523846  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||| || |||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  2523847 ggtttttaaattgtaattggttattaatagagtagaaaattcgttgaatttgtgcagaattgatgt 2523912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 67 - 228
Target Start/End: Complemental strand, 37270747 - 37270587
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 166  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||    
T  37270747 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaagtt 37270648  T
Q  167 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  37270647 ttgaagttgtaatgggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 37270587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 100 - 228
Target Start/End: Original strand, 27484514 - 27484642
Alignment:
Q  100 ttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27484514 ttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaa 27484613  T
Q  200 aatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||    
T  27484614 aatccgttgaatttgtgtagaattgatgt 27484642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 48 - 185
Target Start/End: Complemental strand, 25142271 - 25142133
Alignment:
Q  48 cttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttat 146  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| || |||||||||||||||| |    
T  25142271 cttcgtcgataaatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagtttt 25142172  T
Q  147 gggaatttgggaattaggttttgaagttgtaattggttg 185  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  25142171 gggaatttgggaattaggtttagaagttgtaattggttg 25142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 111 - 228
Target Start/End: Complemental strand, 36841268 - 36841151
Alignment:
Q  111 tgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaa 210  Q
    |||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  36841268 tgaaattgagtttaacatgttgtaggttgtagttatgggaatttagaaattaggttttgaagttgtaattggttgttaatagagtagaaaatatgttgaa 36841169  T
Q  211 tttgtgtagaattgatgt 228  Q
    ||||||||||||||||||    
T  36841168 tttgtgtagaattgatgt 36841151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 46 - 187
Target Start/End: Original strand, 1383526 - 1383667
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||||||||||||     
T  1383526 tccttcgtcgatcaatctgaggtaagggtgagactaactttctctaattctaagttgtatcattctgaaactggatttaacaggtggtaggttgtagttt 1383625  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgtt 187  Q
    ||| |||||||||||||||||| |||||||||||||||||||    
T  1383626 tggaaatttgggaattaggtttagaagttgtaattggttgtt 1383667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 54 - 177
Target Start/End: Complemental strand, 27852729 - 27852605
Alignment:
Q  54 cgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaat 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| || |||||||||||| ||| |||||||    
T  27852729 cgatcaatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgttgttttgggaat 27852630  T
Q  153 ttgggaattaggttttgaagttgta 177  Q
    ||||||||||| ||| |||||||||    
T  27852629 ttgggaattagatttagaagttgta 27852605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 357934 - 357809
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| | | ||||||||||||    
T  357934 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatt 357835  T
Q  162 aggttttgaagttgtaattggttgtt 187  Q
    |||||| |||||||||||||||||||    
T  357834 aggtttagaagttgtaattggttgtt 357809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 3539899 - 3539766
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| || |||| || |||||||||||||||| | ||||    
T  3539899 tcgatgaatctaaggtaagggtgggactaactttctctaattttaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttttggaa 3539800  T
Q  152 tttgggaattaggttttgaagttgtaattggttg 185  Q
    |||| ||||||||||| |||||||||||||||||    
T  3539799 tttgagaattaggtttagaagttgtaattggttg 3539766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 22502027 - 22501897
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttggg 157  Q
    ||||||||||||||||||||||||||||||||||||||||||  | ||||||||| |||||  |||| |||||||| |||||||||| |  |||||||||    
T  22502027 aatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtgggttgtagttttatgaatttggg 22501928  T
Q  158 -aattaggttttgaagttgtaattggttgtt 187  Q
     ||||||| || |||||||| ||||||||||    
T  22501927 aaattagggttagaagttgtgattggttgtt 22501897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 22509961 - 22509831
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttggg 157  Q
    ||||||||||||||||||||||||||||||||||||||||||  | ||||||||| |||||  |||| |||||||| |||||||||| |  |||||||||    
T  22509961 aatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtgggttgtagttttatgaatttggg 22509862  T
Q  158 -aattaggttttgaagttgtaattggttgtt 187  Q
     ||||||| || |||||||| ||||||||||    
T  22509861 aaattagggttagaagttgtgattggttgtt 22509831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 163
Target Start/End: Complemental strand, 44072619 - 44072509
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||| ||||| ||| || ||||||| ||||||| |||||||||||||||| ||||||    
T  44072619 tcgatcaacctaaggtaagggtgagactaactttcactaattctaag-tgtatgattttgaaaattgaatttagcaagttgtaggttgtagttttgggaa 44072521  T
Q  152 tttgggaattag 163  Q
    ||||| ||||||    
T  44072520 tttggaaattag 44072509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 180
Target Start/End: Complemental strand, 22260097 - 22259974
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaattt 154  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||| || || |||||| ||||||| |||| || |||||||||||||||| | |||||||    
T  22260097 atcaatctaaggtaagagtgtgactaactttcactaattctaag-tgcatgattctgaaaattgaatttaacaggttgtaggttgtagtt-taggaattt 22260000  T
Q  155 gggaattaggttttgaagttgtaatt 180  Q
    |||||||||| || ||||||||||||    
T  22259999 gggaattaggcttagaagttgtaatt 22259974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 166
Target Start/End: Complemental strand, 25046180 - 25046066
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || |||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||  |||| ||||||||||| ||||||| || | |    
T  25046180 tcgattaacctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggatgtagttttgagga 25046081  T
Q  152 tttgggaattaggtt 166  Q
    |||  ||||||||||    
T  25046080 tttaagaattaggtt 25046066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 166
Target Start/End: Complemental strand, 5986239 - 5986125
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || |||||||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||  |||| || |||||||||| ||||| || | |    
T  5986239 tcgattaacctaaggtaagggtgggacgaaccttctttaattctaagttgtataattctgaaaattggatttaacaagttgtaggttatagttttgagga 5986140  T
Q  152 tttgggaattaggtt 166  Q
    |||| ||||||||||    
T  5986139 tttgagaattaggtt 5986125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 115
Target Start/End: Original strand, 21315459 - 21315528
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  21315459 tccttcgtcgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 21315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 115
Target Start/End: Original strand, 21335249 - 21335318
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  21335249 tccttcgtcgatcaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 21335318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 19358953 - 19358820
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || |||||||||||||||||||||| ||   ||||||| |||  ||| ||||||||| |||| |||| || ||||| |||||||||| ||||||    
T  19358953 tcgattaacctaaggtaagggtgggactaacctttaataattctgagta-tatgattctgaaaattgaatttaacaagttgtgggttgtagttttgggaa 19358855  T
Q  152 tttggg-aattaggttttgaagttgtaattggttg 185  Q
    |||||| ||||||| || |||||||||||||||||    
T  19358854 tttgggaaattagggttagaagttgtaattggttg 19358820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 18388183 - 18388312
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaattt 154  Q
    |||||||||||||||||||| ||||||| |||  |||| || |||  ||| ||||||||| |||  |||| || |||||||||||||||| |||||||||    
T  18388183 atcaatctaaggtaagggtgagactaaccttcaataatcctgagta-tatgattctgaaaattggatttaacaagttgtaggttgtagttttgggaattt 18388281  T
Q  155 gggaattaggttttgaagttgtaattggttg 185  Q
    |||||||| | || ||||||| || ||||||    
T  18388282 gggaattatggttagaagttgcaaatggttg 18388312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 175
Target Start/End: Original strand, 18390229 - 18390326
Alignment:
Q  78 actaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttg 175  Q
    |||||||||||||||||||||||  |||||||||| |||| || |||| || | |||| ||||||||| ||||||||||||||||||| || |||||||    
T  18390229 actaactttctctaattctaagtgatataattctgaaaatagaatttaacaag-tgtatgttgtagttttgggaatttgggaattaggattagaagttg 18390326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 14694388 - 14694276
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatggga- 150  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||||||  | ||||| || ||||||  |||| |||| |||||||||||||| |||||     
T  14694388 tcgattaatctaaggtaagggtgagactaactttctataattctaagtaatttaattttgaaaattggatttaacatgatgtaggttgtagtt-tgggag 14694290  T
Q  151 atttgggaattagg 164  Q
    ||||| ||||||||    
T  14694289 atttgagaattagg 14694276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 21080968 - 21081021
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  21080968 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 21081021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 161
Target Start/End: Original strand, 23068390 - 23068505
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||| |||||||||||| ||||| | |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||||| |||||    
T  23068390 tccttcgtcgatcaatccaaggtaagggtgagactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagtt 23068488  T
Q  145 atgggaatttgggaatt 161  Q
     || | |||||||||||    
T  23068489 ttgaggatttgggaatt 23068505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 24884453 - 24884399
Alignment:
Q  132 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgt 186  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||    
T  24884453 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 24884399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 25184242 - 25184189
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  25184242 ctaaggtaagggtgagactaactttctctaattctaagtattttaattctgaaa 25184189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 21915677 - 21915624
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||| ||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  21915677 ctaaagtaagggtgtgactaactttctctaattctaagtattttaattctgaaa 21915624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 149497 - 149549
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattct 111  Q
    |||||||||||||||||| |||| |||||||||||  | ||||||||||||||    
T  149497 aatctaaggtaagggtggaactagctttctctaataatgagttgtataattct 149549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 18357975 - 18358019
Alignment:
Q  71 gggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||||||||||  | |||||||||||    
T  18357975 gggtgggactaactttctctaattctaagtattttaattctgaaa 18358019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 164
Target Start/End: Complemental strand, 9785607 - 9785489
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    |||||||||| |||||| |||||||||||||||||||| |||  ||||  |||||  | | |||||| ||||||  ||||  |||||||| ||| |||||    
T  9785607 tccttcgtcgttcaatccaaggtaagggtgggactaacattcaataatcttaagtcat-tgattctgaaaattggatttaatatgttgtaagttttagtt 9785509  T
Q  145 atgggaatttgggaattagg 164  Q
     || ||||||||||||||||    
T  9785508 ttgagaatttgggaattagg 9785489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 23801552 - 23801518
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaat 93  Q
    ||||||||||||||||||||||| |||||||||||    
T  23801552 aatctaaggtaagggtgggactagctttctctaat 23801518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 83
Target Start/End: Original strand, 28652542 - 28652572
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaac 83  Q
    |||||||||||||||||||||||||||||||    
T  28652542 tcgatcaatctaaggtaagggtgggactaac 28652572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 23610679 - 23610626
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||| |||||||||||  |  ||||||||||| |||||    
T  23610679 ctaaggtaagggtgggactagctttctctaataatgggttgtataattatgaaa 23610626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 21369349 - 21369293
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||| | ||||||||||   |  |||||||||||||||||    
T  21369349 aatctaaggtaagggtgggacaagctttctctaacaatgggttgtataattctgaaa 21369293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 171; Significance: 6e-92; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 46 - 228
Target Start/End: Complemental strand, 3251 - 3069
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  3251 tccttcgtcgatcaatctaaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgactttagtatgttgtaggttgtagtta 3152  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3151 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 3069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 121 - 228
Target Start/End: Complemental strand, 2558 - 2451
Alignment:
Q  121 tttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2558 tttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 2459  T
Q  221 attgatgt 228  Q
    ||||||||    
T  2458 attgatgt 2451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 46 - 228
Target Start/End: Original strand, 14180381 - 14180563
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14180381 tccttcgtcgatcaatctaaggtaagggtgtgactaattttctctaattctaagttgtataattctgaaattgagtttagcatattgtaggttgtagtta 14180480  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14180481 tgggaatttgggaattatgttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 14180563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 12465260 - 12465425
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12465260 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 12465359  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12465360 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 12465425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 46 - 228
Target Start/End: Complemental strand, 20214216 - 20214034
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20214216 tccttcgtcgattaatctaaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 20214117  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20214116 tgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtacaattgatgt 20214034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 46 - 228
Target Start/End: Complemental strand, 20586421 - 20586239
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20586421 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaccatgttgtaggttgtagtta 20586322  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||| || || |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20586321 tgggaattaggaaactagggtttgaagttgcaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20586239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 20620338 - 20620173
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20620338 taaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaatta 20620239  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20620238 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20620173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 12372326 - 12372161
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  12372326 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgcaggttgtagttatgggaatttgagaatta 12372227  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12372226 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 12372161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 13147472 - 13147637
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13147472 taaggtaagggtgggactaactttctctaattctaagttatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 13147571  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  13147572 ggttttgaagttgtaattggttgttaataaagtagaaaatccgttgaatttgtgtagaagtgatgt 13147637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 53 - 228
Target Start/End: Original strand, 46386078 - 46386253
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaat 152  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  46386078 tcgatcaatctaagataagggtaggactaactttctctaattctaagttgtataattctgaaattgagtttaatatgttgtaggttgtagttatgggaat 46386177  T
Q  153 ttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46386178 ttgagaattaggttttgaagttgtaattggttgttaatagagtagaaattccgttgaatttgtgtagaattgatgt 46386253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 8851159 - 8851324
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  8851159 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttggaaatta 8851258  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  8851259 ggttttgaagttgtaattggttgttaatagagtataaaatctgttgaatttgtgtagaattgatgt 8851324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 12322930 - 12323095
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12322930 taaggtaagggtggaactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaatta 12323029  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12323030 ggttttgaagttgtacttggttgttaatagaatagaaaatccgttgaatttgtgtagaattgatgt 12323095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 12127159 - 12127328
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  12127159 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttttagttatggaaatttggga 12127258  T
Q  159 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||    
T  12127259 attaggttttgaagttgtaattggttgttaagagagtagaaaattcgttgaatttgtgtagaatttatgt 12127328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 11067520 - 11067355
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11067520 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 11067421  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||| || |||||||||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  11067420 ggttttgatgtagtaattggttgttaatagagtagaaaattcgttgaatttgtggagaagtgatgt 11067355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 32433589 - 32433754
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  32433589 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgtgaatttgtgaatta 32433688  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  32433689 ggttttgaagttgtaattggttgttaatagagtagaaaattagttgaatttgtgtagaagtgatgt 32433754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 16999488 - 16999320
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattcta--agttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaattt-gggaa 159  Q
    ||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||    
T  16999488 taaggtaagggtgagactaactttctctaattctataagttgtataattctgaaattgagtttagcatgttatatgttgtagttatgggaattttgggaa 16999389  T
Q  160 ttaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16999388 ttaggttttgaagttgtaatcggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 16999320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 67 - 228
Target Start/End: Complemental strand, 10277375 - 10277215
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 166  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  10277375 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 10277276  T
Q  167 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  10277275 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 10277215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 58 - 228
Target Start/End: Original strand, 24269942 - 24270112
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 157  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||   | || ||| |||||    
T  24269942 caatctaaggtaagggtgggattaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaagttggg 24270041  T
Q  158 aattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  24270042 aattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgtacaattgatgt 24270112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 48807315 - 48807448
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || |||| || ||||||| |||||||| ||||||    
T  48807315 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtagattgtagttttgggaa 48807414  T
Q  152 tttgggaattaggttttgaagttgtaattggttg 185  Q
    |||||||||| |||   |||||||||||||||||    
T  48807415 tttgggaatttggtacagaagttgtaattggttg 48807448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 14218885 - 14219008
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| || |||||||||||||||| || |||    
T  14218885 tcgatcaatctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgagaa 14218984  T
Q  152 tttgggaattaggttttgaagttg 175  Q
    ||| |||||||||||| |||||||    
T  14218985 ttttggaattaggtttagaagttg 14219008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 15095630 - 15095759
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaattt 154  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || |||||||||||||||| |||||||||    
T  15095630 atcaatctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaattt 15095728  T
Q  155 gggaattaggttttgaagttgtaattggttg 185  Q
    ||||||||||||| |||||||||||| ||||    
T  15095729 gggaattaggtttagaagttgtaattagttg 15095759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 53 - 187
Target Start/End: Original strand, 47974810 - 47974944
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaat 152  Q
    ||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| ||| |||    
T  47974810 tcgattaacctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaat 47974909  T
Q  153 ttgggaattaggttttgaagttgtaattggttgtt 187  Q
    |||||||||| |||| |||||||||||||||||||    
T  47974910 ttgggaattatgtttagaagttgtaattggttgtt 47974944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 13698621 - 13698761
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||  |||||||| ||||||  |||  |||||| ||||||||||||    
T  13698621 tccttcgtcgatcaatctaaggtaagggtaggactaactttctttaattttaagttgattaattctgaaaattggatttgacatgttttaggttgtagtt 13698720  T
Q  145 atgggaatttgggaattaggttttgaagttgtaattggttg 185  Q
     ||| ||||||||||||||| || |||||||||||||||||    
T  13698721 ttggaaatttgggaattagggttagaagttgtaattggttg 13698761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 8135231 - 8135359
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttg 155  Q
    |||||||||||||||||||| ||||||| ||| ||||| |||||| |||| ||||||||||||| |||| || |||||||||||||||| | ||||||||    
T  8135231 atcaatctaaggtaagggtgagactaaccttcactaatcctaagt-gtatgattctgaaattgaatttaacaggttgtaggttgtagttttaggaatttg 8135329  T
Q  156 ggaattaggttttgaagttgtaattggttg 185  Q
     ||||||||||| |||||||||||||||||    
T  8135330 agaattaggtttagaagttgtaattggttg 8135359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 15140275 - 15140143
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||||||||||||||| ||||| ||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || |||||||||||||||| ||||||    
T  15140275 tcgatcaatctaaggtatgggtgagactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaa 15140177  T
Q  152 tttgggaattaggttttgaagttgtaattggttg 185  Q
    ||||||||||||||||  ||||||||||||||||    
T  15140176 tttgggaattaggtttaaaagttgtaattggttg 15140143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 35771431 - 35771554
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||  |||||||||| |||| || |||| || |||||||||||||||| ||| ||    
T  35771431 tcgattaacctaaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaatcgaatttaacaagttgtaggttgtagttttggaaa 35771530  T
Q  152 tttgggaattaggttttgaagttg 175  Q
    |||||||||||||||| |||||||    
T  35771531 tttgggaattaggtttagaagttg 35771554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 223
Target Start/End: Complemental strand, 33002205 - 33002053
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||  |||| |       ||||||||||| |||||||||||||||||    
T  33002205 taaggtaagggtcggactaactttctctaattctaagttgtatgattctgaaattggatttaac-------aggttgtagtt-tgggaatttgggaatta 33002114  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 223  Q
    || || |||||||||||||||||||   | |||||| |||| |||||||| ||||||||||    
T  33002113 gggttagaagttgtaattggttgttgtaatagtagagaatctgttgaattggtgtagaatt 33002053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 15624080 - 15623950
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaat 152  Q
    ||||||||||||||||||||||| ||||||| |||  ||||||||||| |||| ||||||||||||| ||||  | ||||||| |||||||| |||||||    
T  15624080 tcgatcaatctaaggtaagggtgagactaaccttcaataattctaagt-gtatgattctgaaattgaatttaataggttgtagtttgtagttttgggaat 15623982  T
Q  153 ttgggaattaggttttgaagttgtaattggtt 184  Q
    ||| ||||||||||| | ||||||||||||||    
T  15623981 ttgagaattaggtttaggagttgtaattggtt 15623950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 25943166 - 25943041
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 166  Q
    |||| ||||||| ||||||||||||||| |  ||||||||||||||||||||| ||||||||||||| | ||||   | || |||||||| |||||||||    
T  25943166 gtaacggtgggattaactttctctaattttgggttgtataattctgaaattgaatttagcatgttgttgtttgtgaatttgtgaatttggaaattaggtt 25943067  T
Q  167 ttgaagttgtaattggttgttaatag 192  Q
    ||||||| ||||||||||||||||||    
T  25943066 ttgaagtcgtaattggttgttaatag 25943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 53 - 175
Target Start/End: Complemental strand, 4071882 - 4071759
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||  ||||| |||| ||||||  |||| || |||||||||||||||| |||| |    
T  4071882 tcgattaacctaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttgggga 4071783  T
Q  152 tttgggaattaggttttgaagttg 175  Q
    |||| ||||||||||| |||||||    
T  4071782 tttgagaattaggtttagaagttg 4071759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 12754602 - 12754716
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaat 152  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||  |||| || || |||||||||||| |||| |||    
T  12754602 tcgattaacctaaggtaagggtgggactaactttctctaattctaagttatatgattctgaaactggatttaacaggtggtaggttgtagtaatggaaat 12754701  T
Q  153 ttgggaattaggttt 167  Q
    |||||||||| ||||    
T  12754702 ttgggaattatgttt 12754716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 16078382 - 16078281
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| || |||| || |||| || ||||||| |||||||| ||||||||||||||||    
T  16078382 taaggtaagggtgggactaactttctctaattctaagtggtataattatgaaaatcgaatttaacaagttgtagtttgtagttttgggaatttgggaatt 16078283  T
Q  162 ag 163  Q
    ||    
T  16078282 ag 16078281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 44374899 - 44374833
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttag 125  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  44374899 aatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagtttag 44374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 44383764 - 44383698
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttag 125  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  44383764 aatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagtttag 44383698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 13132319 - 13132443
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||               ||||||||||| |||| || ||||||||| ||||||     
T  13132319 tccttcgtcgatcaatctaaggtaagggtggaactaattttctctaat---------------tctgaaattgaatttaacaagttgtaggtcgtagttt 13132403  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttg 185  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  13132404 tgggaatttgggaattaggtttagaagttgtaatcggttg 13132443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 144
Target Start/End: Original strand, 10658841 - 10658932
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||| || |||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||  |||| ||| ||||||| |||||||    
T  10658841 tcgattaacctaaggtaagggtgggactaaccttctttaattctaagttgtatgattctgaaattggatttaacattttgtaggatgtagtt 10658932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 183
Target Start/End: Complemental strand, 12557975 - 12557853
Alignment:
Q  61 tctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaa 159  Q
    |||||| |||| ||| ||||||| ||| |||||||||||| |||| ||||| ||| |||| |||| || |||||||||||||||| ||||||||||| ||    
T  12557975 tctaagataagagtgagactaaccttcactaattctaagt-gtatgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttggaaa 12557877  T
Q  160 ttaggttttgaagttgtaattggt 183  Q
    |||||||| ||||||| |||||||    
T  12557876 ttaggtttagaagttgaaattggt 12557853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 15289167 - 15289052
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || |||||||||||||||||| ||||||||||||||||||||  ||||| |||| ||||||  |||| || |||||||||||||||| || | |    
T  15289167 tcgattaacctaaggtaagggtgggaccaactttctctaattctaagtattataactctgaaaattggatttaacaagttgtaggttgtagttttgagga 15289068  T
Q  152 tttgggaattaggttt 167  Q
    |||| |||||||||||    
T  15289067 tttgagaattaggttt 15289052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 13744662 - 13744728
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgt 133  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||||||| |||||||||||||||    
T  13744662 gtaagggtgggattaactttctctaattttaggttgtataattctgaaattaagtttagcatgttgt 13744728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 4690662 - 4690715
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4690662 ctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaa 4690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 164
Target Start/End: Original strand, 36704561 - 36704673
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgg-gaa 151  Q
    ||||| ||||||||||||||||||||||||| |||| ||||| |||||||| |||||||||||||   |||| ||||||||| | ||||||| ||| | |    
T  36704561 tcgattaatctaaggtaagggtgggactaaccttctttaattttaagttgtgtaattctgaaatttgatttaacatgttgtaagatgtagttttggagga 36704660  T
Q  152 tttgggaattagg 164  Q
    |||| ||||||||    
T  36704661 tttgagaattagg 36704673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 11054775 - 11054642
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || |||||||||||||||||||||| |||  | ||||||||| || | ||||||||| |||| |||| || ||||||||||||| || ||||||    
T  11054775 tcgattaaactaaggtaagggtgggactaaccttcaatgattctaagt-gtttgattctgaaaattgaatttaacaggttgtaggttgtaattttgggaa 11054677  T
Q  152 tttggg-aattaggttttgaagttgtaattggttg 185  Q
    |||||| ||||||| ||  ||||||||||||||||    
T  11054676 tttgggaaattagggttataagttgtaattggttg 11054642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 14928272 - 14928362
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtag 135  Q
    ||||||||||||||||| |||||||||||||||||||| |||  |||||||||||| | |||||||| ||||||  |||| ||||||||||    
T  14928272 tccttcgtcgatcaatccaaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 14928362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 15351738 - 15351828
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtag 135  Q
    ||||||||||||||||| |||||||||||||||||||| |||  |||||||||||| | |||||||| ||||||  |||| ||||||||||    
T  15351738 tccttcgtcgatcaatccaaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 15351828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 115
Target Start/End: Original strand, 708412 - 708481
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||  |  |||||||||||||||||    
T  708412 tccttcgtcgatcaatctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaa 708481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 115
Target Start/End: Complemental strand, 3287813 - 3287744
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||| ||||||||||||||||||||||||| ||||| |||||||||||  || |||||||||||||||||    
T  3287813 tcctccgtcgatcaatctaaggtaagggtgagactagctttctctaataataggttgtataattctgaaa 3287744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 115
Target Start/End: Original strand, 18874648 - 18874717
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  18874648 tccttcgtcgatcaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 18874717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 164
Target Start/End: Complemental strand, 32302296 - 32302177
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg--aaattgagtttagcatgttgtaggttgtagt 143  Q
    ||||||||||||||||| |||||||||||||||||| | |||  |||||||||||  | ||||||||  ||||||  |||| ||||||||||||| ||||    
T  32302296 tccttcgtcgatcaatccaaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaaattgtatttaacatgttgtaggtt-tagt 32302198  T
Q  144 tatgggaatttgggaattagg 164  Q
    | || | ||||||||||||||    
T  32302197 tttgaggatttgggaattagg 32302177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 46 - 164
Target Start/End: Complemental strand, 14259463 - 14259346
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||| |||||||||||||||||| | |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||  | |||||    
T  14259463 tccttcgtcgatcaatccaaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtag--tttagtt 14259366  T
Q  145 atgggaatttgggaattagg 164  Q
     || ||||||||||||||||    
T  14259365 ttgagaatttgggaattagg 14259346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 20252171 - 20252234
Alignment:
Q  52 gtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||| |||||| |||||||||||  | ||||||||||||||||||    
T  20252171 gtcgatcaatctaaggtaagggtaggactagctttctctaataatgagttgtataattctgaaa 20252234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 15575635 - 15575701
Alignment:
Q  49 ttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||  |  |||||||||||||||||    
T  15575635 ttcgtcgatcaatctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaa 15575701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 29052181 - 29052234
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  29052181 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 29052234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 115
Target Start/End: Complemental strand, 47095521 - 47095452
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||  |  |||| ||||||||||||    
T  47095521 tccttcgtcaatcaatctaaggtaagggtgggactagctttctctaataatgggttgaataattctgaaa 47095452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 19195667 - 19195611
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  19195667 aatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 19195611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 183
Target Start/End: Complemental strand, 41285043 - 41284963
Alignment:
Q  103 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggt 183  Q
    ||||||||||||||||  ||||  | ||| |||||||||||| | |||||||||||||||||||| |||||| ||||||||    
T  41285043 tataattctgaaattggatttaataggttataggttgtagttttaggaatttgggaattaggtttagaagttataattggt 41284963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 16250219 - 16250274
Alignment:
Q  60 atctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||||| |||||    
T  16250219 atctaaggtaagggtgggactaactttctctaataatgagttgtataattttgaaa 16250274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 18955392 - 18955330
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||| || ||||||||| |||| ||||||||||||||||||||||||  |||||||||||||    
T  18955392 tcgattaacctaaggtaaaggtgagactaactttctctaattctaagtgttataattctgaaa 18955330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 16550004 - 16550057
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||| |||||||||||||||||||||||||||  | |||||||||||    
T  16550004 ctaaggtaaggttgggactaactttctctaattctaagtattttaattctgaaa 16550057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 16615658 - 16615605
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||| |||||||||||||||||||||||||||  | |||||||||||    
T  16615658 ctaaggtaaggttgggactaactttctctaattctaagtattttaattctgaaa 16615605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 36685145 - 36685253
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    ||||||||||||||| || ||| |||  ||||||| |||  | ||||||||||| ||  |||| || |||||||||||||||| ||| ||||||||||||    
T  36685145 ctaaggtaagggtggaaccaaccttcaataattctgagta-tgtaattctgaaactggatttaacaggttgtaggttgtagttttggaaatttgggaatt 36685243  T
Q  162 aggttttgaa 171  Q
    ||| ||||||    
T  36685244 agggtttgaa 36685253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 38299804 - 38299748
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  38299804 aatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 38299748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 43276744 - 43276796
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||  |  |||||||||||||||||    
T  43276744 taaggtaagggtgggactaactttctctaataatgggttgtataattctgaaa 43276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 14318141 - 14318094
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaat 93  Q
    |||||||||||||||||||||||||||||||||| ||| |||| ||||    
T  14318141 tccttcgtcgatcaatctaaggtaagggtgggacaaaccttctttaat 14318094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 25942401 - 25942358
Alignment:
Q  185 gttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  25942401 gttaatagagtagaaaatccattgaatttgtgtacaattgatgt 25942358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 8488084 - 8488142
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattct 111  Q
    ||||| || ||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  8488084 tcgattaacctaaggtaagggtgggactaactttctctaataatgggttgtataattct 8488142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 8513743 - 8513801
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattct 111  Q
    ||||| || ||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  8513743 tcgattaacctaaggtaagggtgggactaactttctctaataatgggttgtataattct 8513801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 109
Target Start/End: Original strand, 18074647 - 18074693
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataatt 109  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  18074647 taaggtaagagtgggattaactttctctaattctaagtggtataatt 18074693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 18990909 - 18990847
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||| || ||||||||| ||||  |||||||||||||||||||||||  |||||||||||||    
T  18990909 tcgattaacctaaggtaaaggtgatactaactttctctaattctaagtgttataattctgaaa 18990847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 30820150 - 30820243
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgg 156  Q
    ||||||| |||||||||||||| |||  ||||||| |||  | ||||||||||| ||  |||| || |||||||||||||||| |||||||||||    
T  30820150 ctaaggtgagggtgggactaaccttcagtaattctgagta-tgtaattctgaaactggatttaacaggttgtaggttgtagttttgggaatttgg 30820243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 32160190 - 32160252
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||| || |||||||||||||  ||||||||||||||||||||||||  | |||||||||||    
T  32160190 tcgattaacctaaggtaagggtaagactaactttctctaattctaagtaatttaattctgaaa 32160252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 43745709 - 43745656
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||| |||||||||||  | |||||||||||| |||||    
T  43745709 ctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaa 43745656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 58409 - 58443
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaat 93  Q
    ||||||||||||||||||||||| |||||||||||    
T  58409 aatctaaggtaagggtgggactagctttctctaat 58443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 13315078 - 13315152
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgt 133  Q
    ||||||||||||||||| ||||| |||||||||||  |  ||||||| |||||||||  | ||||| ||||||||    
T  13315078 aatctaaggtaagggtgagactatctttctctaataatgggttgtatgattctgaaaaggggtttaacatgttgt 13315152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 13744506 - 13744540
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaat 93  Q
    ||||||||||||||||||||||| |||||||||||    
T  13744506 aatctaaggtaagggtgggactagctttctctaat 13744540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 16580686 - 16580649
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaac 83  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  16580686 tccttcgtcgatcaatccaaggtaagggttggactaac 16580649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 20488405 - 20488368
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaac 83  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  20488405 tccttcgtcgatcaatccaaggtaagggtgagactaac 20488368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 19283108 - 19283056
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||| ||||||||||||||||   |  |||||||||||||||||    
T  19283108 taaggtaagggtgagactaactttctctaagaatgggttgtataattctgaaa 19283056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 167; Significance: 1e-89; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 46 - 228
Target Start/End: Original strand, 15890695 - 15890877
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  15890695 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttt 15890794  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15890795 tgttaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 15890877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 7828024 - 7827859
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7828024 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 7827925  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7827924 ggttttgaagttgtaattggttgttaatagagtagaaaatcggttgaatttgtgtagaattgatgt 7827859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 19655231 - 19655396
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19655231 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 19655330  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19655331 ggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 19655396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 23150287 - 23150452
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23150287 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 23150386  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  23150387 ggttttgaagttgtaattggttgttaatagagtataaaatttgttgaatttgtgtagaattgatgt 23150452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 27125477 - 27125642
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  27125477 taaggtaagggtgagactaactttctctaattctaagttgtataagtctaaaattgagattagcatgttgtaggttgtagttatgggaatttgggactta 27125576  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  27125577 ggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtatagaagtgatgt 27125642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 18703620 - 18703451
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18703620 taaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagaatgttgtaggttgtagttatgggaatttgggaatta 18703521  T
Q  163 ggttttgaagttgt----aattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    | ||||||||||||    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  18703520 gattttgaagttgtaattaattggttgttaatagagtagaaaatccgttgaatttgtatagaagtgatgt 18703451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 18709555 - 18709386
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18709555 taaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagaatgttgtaggttgtagttatgggaatttgggaatta 18709456  T
Q  163 ggttttgaagttgt----aattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    | ||||||||||||    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  18709455 gattttgaagttgtaattaattggttgttaatagagtagaaaatccgttgaatttgtatagaagtgatgt 18709386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 62 - 213
Target Start/End: Original strand, 27329980 - 27330131
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  27329980 ctaaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaatt 27330079  T
Q  162 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27330080 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27330131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 62 - 213
Target Start/End: Original strand, 27390720 - 27390871
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  27390720 ctaaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaatt 27390819  T
Q  162 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27390820 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27390871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 24267907 - 24267801
Alignment:
Q  57 tcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgg 156  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  24267907 tcaatcaaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttga 24267808  T
Q  157 gaattag 163  Q
    |||||||    
T  24267807 gaattag 24267801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 46 - 181
Target Start/End: Complemental strand, 18928750 - 18928614
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||| |||| || ||||||||||| ||||    
T  18928750 tccttcgtcgatgaatctaaggtaagggtaggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagtt 18928651  T
Q  145 atgggaatttgggaattaggttttgaagttgtaattg 181  Q
     ||||||||||| |||||||||| |||||||||||||    
T  18928650 ttgggaatttggaaattaggtttagaagttgtaattg 18928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 58 - 224
Target Start/End: Complemental strand, 19235180 - 19235015
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 157  Q
    ||||||||| ||||||||||| ||||||||||||||| || ||||||||||||||||||||| ||||| ||||||| | ||||   | || |||||||||    
T  19235180 caatctaagttaagggtgggattaactttctctaattttaggttgtataattctgaaattgattttaggatgttgttgtttgtgaatttgtgaatttggg 19235081  T
Q  158 aattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 224  Q
     ||||||||||||||| ||||||||||||||||| |||||||||||| ||||| ||||||| |||||    
T  19235080 -attaggttttgaagtcgtaattggttgttaataaagtagaaaatccattgaacttgtgtacaattg 19235015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 56 - 223
Target Start/End: Complemental strand, 28948634 - 28948466
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgta-gttatgggaattt 154  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||| |||||| ||| | | |||||    
T  28948634 atcaatctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaagtggtaagttgtaggttttagaaattt 28948535  T
Q  155 gggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 223  Q
    ||||||||||||| |||||||||||||||||||   | ||||||||||  |||||||| ||||||||||    
T  28948534 gggaattaggtttagaagttgtaattggttgttttaatagtagaaaatatgttgaattggtgtagaatt 28948466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 187
Target Start/End: Complemental strand, 18585864 - 18585733
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttg 155  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| ||| |||||     
T  18585864 atcaatatatggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaattta 18585765  T
Q  156 ggaattaggttttgaagttgtaattggttgtt 187  Q
    |||||||||||| |||||||||||||||||||    
T  18585764 ggaattaggtttagaagttgtaattggttgtt 18585733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 58 - 224
Target Start/End: Original strand, 30673397 - 30673556
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 157  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||||||||||||| ||| | ||||        |||||| ||    
T  30673397 caatctaaggtaagggtgggattaactttctctaattttaggttgtataattttgaaattgagtttagcatgatgttgtttgt--------gaattttgg 30673488  T
Q  158 aattaggttttgaagttgtaa-ttggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 224  Q
    |||||||||||||| | |||| |||||||||||||||||||||||| | ||||||||||||| |||||    
T  30673489 aattaggttttgaattagtaatttggttgttaatagagtagaaaattcattgaatttgtgtacaattg 30673556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 224
Target Start/End: Original strand, 19167848 - 19167998
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 157  Q
    ||||||||||||||||||| | ||||||| ||||||  || ||||||||||||||| ||||||||||||||||||| |                ||||||    
T  19167848 caatctaaggtaagggtggaattaactttgtctaatattaggttgtataattctgatattgagtttagcatgttgttg----------------tttggg 19167931  T
Q  158 aattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 224  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  19167932 aattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgtacaattg 19167998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 19401146 - 19401028
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    ||||||||||||||||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || |||||||||||||||| |||||||||| |||||    
T  19401146 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgagaatt 19401048  T
Q  162 aggttttgaagttgtaattg 181  Q
    ||||||  ||||||||||||    
T  19401047 aggtttataagttgtaattg 19401028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 31731894 - 31732009
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || |||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||  |||  || |||||||||||||||| |||| |    
T  31731894 tcgattaacctaaggtaagggtgggactaactttctccaattctaagtgttataattctgaaaattggatttgacaagttgtaggttgtagttttgggga 31731993  T
Q  152 tttgggaattaggttt 167  Q
    |||| |||||||||||    
T  31731994 tttgagaattaggttt 31732009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 23501734 - 23501601
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtag-ttatggga 150  Q
    ||||||||||||||||||||||| ||||||| |||  |||||||||  ||| |||||||| ||| ||| |||| || |||||||||||||| || ||| |    
T  23501734 tcgatcaatctaaggtaagggtgagactaaccttcaataattctaa-atgtttaattctgaaaactgaatttaacaagttgtaggttgtagtttttggaa 23501636  T
Q  151 atttgggaattaggttttgaagttgtaattggttg 185  Q
    ||||||||||||||||| |||||||||||| ||||    
T  23501635 atttgggaattaggtttagaagttgtaatttgttg 23501601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 138
Target Start/End: Original strand, 27572122 - 27572198
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcat-gttgtaggtt 138  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||||    
T  27572122 taaggtaagggtgagactaactttctctaattctaagtcgtataattctgaaattgaatttaacatggttgtaggtt 27572198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 15998942 - 15998880
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttta 124  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||    
T  15998942 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagttta 15998880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 24550167 - 24550271
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    |||||||||||||||||||||  |||| ||||| |||||||| ||||||||||||||  |||| ||||||||||| ||||||| |||  ||||  |||||    
T  24550167 ctaaggtaagggtgggactaaacttctttaattgtaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagttttggagatttaagaatt 24550266  T
Q  162 aggtt 166  Q
    |||||    
T  24550267 aggtt 24550271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 19772649 - 19772767
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||| |||||||||||||||||| | |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||||| |||||    
T  19772649 tccttcgtcgatcaatccaaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagtt 19772747  T
Q  145 atgggaatttgggaattagg 164  Q
     || | ||||||||||||||    
T  19772748 ttgaggatttgggaattagg 19772767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 12041610 - 12041672
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||| || |||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  12041610 tcgattaacctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaa 12041672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 22806808 - 22806694
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||| |||||||||||||||||| | |||  |||||||||||  | |||||||| |||||   |||| ||||||||||||| |||||    
T  22806808 tccttcgtcgatcaatccaaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattatatttaacatgttgtaggtt-tagtt 22806710  T
Q  145 atgggaatttgggaat 160  Q
     || | ||||||||||    
T  22806709 ttgaggatttgggaat 22806694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 15173452 - 15173505
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||| |||||||||||||||||||||||||||||  | |||||||||||    
T  15173452 ctaaggtaatggtgggactaactttctctaattctaagtattttaattctgaaa 15173505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 23658145 - 23658089
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||| ||||| |||||  || |||||||||||||||||    
T  23658145 aatctaaggtaagggtgggactagctttccctaataataggttgtataattctgaaa 23658089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 29625231 - 29625191
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataa 107  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  29625231 gtaagggtgggactaactttctctaattctacgttgtataa 29625191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 15704547 - 15704601
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagt 100  Q
    ||||||||||||||||| |||||||||||||||||| | |||  |||||||||||    
T  15704547 tccttcgtcgatcaatccaaggtaagggtgggactagccttcaataattctaagt 15704601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 18259262 - 18259328
Alignment:
Q  153 ttgggaattaggttttga-agttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 218  Q
    |||||||||||||||||| | |||||||| ||||||||| || |||||||||| | |||||||||||    
T  18259262 ttgggaattaggttttgagaattgtaattagttgttaattgaatagaaaatccatagaatttgtgta 18259328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 2077269 - 2077232
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaac 83  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  2077269 tccttcgtcgatcaatccaaggtaagggtgggactaac 2077232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 15900653 - 15900706
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||| ||| ||||||||||||||||||||  | |||||||||||    
T  15900653 ctaaggtaagggtgagaccaactttctctaattctaagtattttaattctgaaa 15900706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 27324695 - 27324735
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaacttt 86  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  27324695 tccttcgtcgatcaatccaaggtaagggtgagactaacttt 27324735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 18982631 - 18982572
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||| ||||||| ||||||| ||||||  |  |||||||||||||||||    
T  18982631 atcaatctaaggtaacggtgggattaactttatctaataatgggttgtataattctgaaa 18982572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 32259914 - 32259867
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaat 93  Q
    |||||||||||||||||| ||||||||||| ||||||| |||| ||||    
T  32259914 tccttcgtcgatcaatcttaggtaagggtgtgactaaccttctttaat 32259867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 10446273 - 10446239
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaat 93  Q
    ||||||||||||||||||||||| |||||||||||    
T  10446273 aatctaaggtaagggtgggactagctttctctaat 10446239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 16624871 - 16624833
Alignment:
Q  48 cttcgtcgatcaatctaaggtaagggtgggactaacttt 86  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  16624871 cttcgtcgatcaatccaaggtaagggtgagactaacttt 16624833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 21683074 - 21683127
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||| |||||||||||  |  |||||||||||| ||||    
T  21683074 ctaaggtaagggtgggactagctttctctaataatgggttgtataattcagaaa 21683127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 13285804 - 13285748
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||||| |||| ||||  | ||||  ||||||||||||    
T  13285804 aatctaaggtaagggtgggactaaccttctataatcatgagtttcataattctgaaa 13285748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 19825482 - 19825538
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||| ||||| |||||||||||  |  |||| ||||||||||||    
T  19825482 aatctaaggtaagggtgagactagctttctctaataatgggttgcataattctgaaa 19825538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 1e-89; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 46 - 228
Target Start/End: Complemental strand, 15115291 - 15115109
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15115291 tcctttgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 15115192  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15115191 tgggaatttgggaattattttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 15115109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 25091705 - 25091540
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25091705 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 25091606  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25091605 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 25091540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 63 - 233
Target Start/End: Complemental strand, 11425995 - 11425825
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11425995 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 11425896  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtccatc 233  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11425895 ggttttgaaattgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgttcatc 11425825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 53630474 - 53630639
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53630474 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 53630573  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  53630574 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 53630639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 46 - 224
Target Start/End: Complemental strand, 37019739 - 37019561
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37019739 tccttcgtcgatcaatctaaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaattgagtttaacatgttgtaggttgtagtta 37019640  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 224  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37019639 tgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattg 37019561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 10356436 - 10356601
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10356436 taaggtaaggttgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 10356535  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10356536 ggttttgaagttgtaattggtagttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 10356601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 42875849 - 42875684
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42875849 taaggtaagggtgggactaactttatataattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaaata 42875750  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42875749 ggttttgaagttgtaattgattgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 42875684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 16998577 - 16998412
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16998577 taaggtaagagtgagactaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 16998478  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  16998477 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagtattgatgt 16998412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 19610376 - 19610211
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19610376 taaggtaagggtgagactaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaatta 19610277  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
     ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19610276 agttttgacgttgtaattggttgttaatagagtagaaaatccgttaaatttgtgtagaattgatgt 19610211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 67 - 228
Target Start/End: Original strand, 6633541 - 6633701
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 166  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  6633541 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 6633640  T
Q  167 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  6633641 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 6633701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 67 - 228
Target Start/End: Original strand, 46001535 - 46001695
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 166  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  46001535 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 46001634  T
Q  167 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  46001635 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 46001695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 46 - 183
Target Start/End: Complemental strand, 9924223 - 9924085
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| || ||||||||||| ||||    
T  9924223 tccttcgtcgatcaatctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagtt 9924124  T
Q  145 atgggaatttgggaattaggttttgaagttgtaattggt 183  Q
     ||||||||||| |||||||||| |||||||||||||||    
T  9924123 ttgggaatttggaaattaggtttagaagttgtaattggt 9924085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 46 - 180
Target Start/End: Complemental strand, 14549829 - 14549695
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||| ||  |||| || || |||||||||||||     
T  14549829 tccttcgtcgatcaatctaaggtaagggtgagactaactttctctaattctaagttgtatgtttctgaaactggatttaacaggtggtaggttgtagttt 14549730  T
Q  146 tgggaatttgggaattaggttttgaagttgtaatt 180  Q
    ||| |||||||||||||||||| ||||||||||||    
T  14549729 tggaaatttgggaattaggtttagaagttgtaatt 14549695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 19434542 - 19434672
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||||||||||||     
T  19434542 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttt 19434641  T
Q  146 tgggaatttgggaattaggttttgaagttgt 176  Q
    | | ||||||||||||| |||| ||||||||    
T  19434642 ttgaaatttgggaattaagtttagaagttgt 19434672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 9870427 - 9870568
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| ||||||  |||  |||| ||||||||||||||    
T  9870427 tccttcgtcgatcaatctaagctaagggtgggactaactttccataattctaagttgtataattctgaaaattggatttgacatgatgtaggttgtagtt 9870526  T
Q  145 atgggaatttggg-aattaggttttgaagttgtaattggttg 185  Q
     |||||||||||| ||||||| || |||||||||||||||||    
T  9870527 ttgggaatttgggaaattagggttagaagttgtaattggttg 9870568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 46 - 181
Target Start/End: Original strand, 11478636 - 11478772
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||| ||||||| |||| || ||||||| ||| ||||    
T  11478636 tccttcgtcgatcaatctaaggtaagggtgagactaacttcctctaattctaagtggtataattctgaaaattgaatttaacaagttgtagattgaagtt 11478735  T
Q  145 atgggaatttgggaattaggttttgaagttgtaattg 181  Q
     ||||||||||| |||||||||| ||| |||||||||    
T  11478736 ttgggaatttggaaattaggtttagaacttgtaattg 11478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 166
Target Start/End: Complemental strand, 21258 - 21144
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || ||||||||||| || ||||||| |||| |||||||||||||||||||||||| |||||| |||| ||||||||||||||||||| || | |    
T  21258 tcgattaacctaaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgagga 21159  T
Q  152 tttgggaattaggtt 166  Q
    |||| ||||||||||    
T  21158 tttgagaattaggtt 21144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 15613143 - 15613061
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtt 144  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||  |||| ||||||||||| |||||||    
T  15613143 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattggatttaacatgttgtaggatgtagtt 15613061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 144
Target Start/End: Complemental strand, 51993623 - 51993532
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||| || |||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||  |||| ||||||||||| |||||||    
T  51993623 tcgattaacctaaggtaagggtgggactaaccttctttaattctaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagtt 51993532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 26921708 - 26921774
Alignment:
Q  150 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 216  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  26921708 aatttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccaatgaatttgtg 26921774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 115
Target Start/End: Complemental strand, 16297007 - 16296938
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  16297007 tccttcgtcgatcaatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 16296938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 2424386 - 2424439
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  2424386 ctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaa 2424439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 115
Target Start/End: Complemental strand, 14631204 - 14631135
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  14631204 tccttcgtcgatcaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 14631135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 35811376 - 35811428
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  35811376 taaggtaagggtgggactaactttctctaattctaagtggtataattttgaaa 35811428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 14187011 - 14186955
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattga 119  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||    
T  14187011 ctaaggtaagggtgggagtaactttctctaattctaag-tgtatgattctgaaattga 14186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 15009016 - 15008963
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  15009016 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 15008963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 21062694 - 21062593
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaat 160  Q
    |||||||||||||||||||||||||||||||||||||||  ||||| | || ||||||  |||| || || ||||||||||||| || | ||||| ||||    
T  21062694 ctaaggtaagggtgggactaactttctctaattctaagtgttataactatgaaaattggatttaacaagtggtaggttgtagttttgaggatttgagaat 21062595  T
Q  161 ta 162  Q
    ||    
T  21062594 ta 21062593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 15011453 - 15011571
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||| || |||||||| |||||| | |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||||| |||||    
T  15011453 tccttcgtcgatcaatccaaagtaagggtaggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagtt 15011551  T
Q  145 atgggaatttgggaattagg 164  Q
     || | ||||||||||||||    
T  15011552 ttgaggatttgggaattagg 15011571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 40620585 - 40620532
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||| |||||||||||||||||||||  | |||||||||||    
T  40620585 ctaaggtaagggtgggaataactttctctaattctaagtattttaattctgaaa 40620532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 9639066 - 9639010
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||| |||||||||||  | |||||| |||||||||||    
T  9639066 aatctaaggtaagggtgggactagctttctctaataatgagttgtgtaattctgaaa 9639010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 25513907 - 25513851
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||| |||||||||| |||||||||||  | ||||||||||||||||||    
T  25513907 aatctaaggtaatggtgggactagctttctctaataatgagttgtataattctgaaa 25513851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 9622548 - 9622511
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaat 93  Q
    |||||||||||||||||||||||||| |||||||||||    
T  9622548 atcaatctaaggtaagggtgggactagctttctctaat 9622511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 10694245 - 10694297
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||| |||||| |||||||||||||||||  | |||||||||||    
T  10694245 taaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaa 10694297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 10908011 - 10908063
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||| |||||| |||||||||||||||||  | |||||||||||    
T  10908011 taaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaa 10908063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 12424290 - 12424342
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  12424290 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 12424342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 32466184 - 32466244
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctga 113  Q
    ||||| || |||||||||||||| ||||||  |||| |||||||||||||| |||||||||    
T  32466184 tcgattaacctaaggtaagggtgagactaatcttctttaattctaagttgtgtaattctga 32466244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 10273439 - 10273405
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaat 93  Q
    ||||||||||||||||||||||| |||||||||||    
T  10273439 aatctaaggtaagggtgggactagctttctctaat 10273405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 14186105 - 14186067
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagt 100  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  14186105 ctaaggtaagggtgggagtaactttctttaattctaagt 14186067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 15225619 - 15225581
Alignment:
Q  48 cttcgtcgatcaatctaaggtaagggtgggactaacttt 86  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  15225619 cttcgtcgatcaatccaaggtaagggtgagactaacttt 15225581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 15239810 - 15239868
Alignment:
Q  57 tcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||| ||||| |||||||||||  | | |||||||| |||||||    
T  15239810 tcaatctaaggtaagggtgagactagctttctctaataatgaattgtataaatctgaaa 15239868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 27028708 - 27028642
Alignment:
Q  153 ttgggaattaggttttga-agttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 218  Q
    |||||||||||||||||| | ||| |||| ||||||||| || |||||||||| | |||||||||||    
T  27028708 ttgggaattaggttttgagaattgcaattagttgttaattgaatagaaaatccatagaatttgtgta 27028642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 40230362 - 40230328
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaat 93  Q
    |||||||||||||||||||||||||||||| ||||    
T  40230362 aatctaaggtaagggtgggactaactttctttaat 40230328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Complemental strand, 9638972 - 9638939
Alignment:
Q  152 tttgggaattaggttttgaagttgtaattggttg 185  Q
    |||||||||||||||| |||||||||||||||||    
T  9638972 tttgggaattaggtttagaagttgtaattggttg 9638939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 12623375 - 12623338
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaat 93  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  12623375 atcaatctaaggtaagggtgggactaaccttctttaat 12623338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 18023078 - 18023041
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaac 83  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  18023078 tccttcgttgatcaatccaaggtaagggtgggactaac 18023041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 55583251 - 55583218
Alignment:
Q  60 atctaaggtaagggtgggactaactttctctaat 93  Q
    |||||||||||||||||||||| |||||||||||    
T  55583251 atctaaggtaagggtgggactagctttctctaat 55583218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 1e-89; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 46 - 228
Target Start/End: Complemental strand, 42913118 - 42912936
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  42913118 tccttcgtcgatcaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttg 42913019  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42913018 tgggaatttaggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 42912936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 19676763 - 19676598
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19676763 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgggaatta 19676664  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19676663 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 19676598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 21046049 - 21046214
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21046049 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 21046148  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21046149 agttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 21046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 16058310 - 16058478
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 158  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16058310 aatctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttggga 16058409  T
Q  159 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16058410 attagg-tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 16058478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 20633631 - 20633799
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtag---ttatgggaatttgggaa 159  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||   |||||||||||||||||    
T  20633631 taagataagggtgggactaacttgctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttatagttattatgggaatttgggaa 20633730  T
Q  160 ttaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||| || |||||  ||||||||||||||||||||||||    
T  20633731 ttaggttttgaagttgtaattggttgttaatagaataaaaaataagttgaatttgtgtagaattgatgt 20633799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 56 - 223
Target Start/End: Complemental strand, 51324563 - 51324396
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttg 155  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| |||||| |||    
T  51324563 atcaatctaaggtaagggtgagactaactttccctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttgggaaattg 51324464  T
Q  156 ggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 223  Q
    ||||||||||||  ||||||||||||||||||   | |||||||||||  ||||||| ||||||||||    
T  51324463 ggaattaggtttaaaagttgtaattggttgttttaatagtagaaaatctattgaattggtgtagaatt 51324396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 46 - 187
Target Start/End: Original strand, 7051905 - 7052046
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||| || |||||     
T  7051905 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattttagttt 7052004  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgtt 187  Q
    | | |||||||||||||||||| ||| |||||||||||||||    
T  7052005 tagaaatttgggaattaggtttagaaattgtaattggttgtt 7052046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 13302964 - 13302849
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| || |||||||||||||||| ||||||    
T  13302964 tcgatcaatctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaa 13302865  T
Q  152 tttgggaattaggttt 167  Q
    ||||||||||||||||    
T  13302864 tttgggaattaggttt 13302849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 56 - 187
Target Start/End: Original strand, 24723344 - 24723475
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttg 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| || || |||| |||||||| ||| ||||||    
T  24723344 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactgaatttaacaggtggtagattgtagttttggaaatttg 24723443  T
Q  156 ggaattaggttttgaagttgtaattggttgtt 187  Q
     |||||| |||| |||||||||||||||||||    
T  24723444 agaattatgtttagaagttgtaattggttgtt 24723475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 58 - 224
Target Start/End: Complemental strand, 21168990 - 21168825
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 157  Q
    ||||||||||||||||||| | ||||||||||||||| || ||||||||||||| ||||||||||||||||||||| | ||||   | || |||||||||    
T  21168990 caatctaaggtaagggtggaattaactttctctaattttaggttgtataattctaaaattgagtttagcatgttgttgtttgtgaatttgtgaatttggg 21168891  T
Q  158 aattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 224  Q
    ||| |||||||||| | ||  || ||| ||||||||||||||||||| ||||||||||||| |||||    
T  21168890 aataaggttttgaattagt-ttttgtttttaatagagtagaaaatccattgaatttgtgtacaattg 21168825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 46 - 212
Target Start/End: Original strand, 4595836 - 4595995
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||| |||| || |||| || |||||||||||||||     
T  4595836 tccttcgtcgatcaatctaaggtaagggtgagactaactttctctaattctaagaggtataattctgaaaatcgaatttaacaagttgtaggttgtagt- 4595934  T
Q  145 atgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatt 212  Q
           |||||||||||| ||| ||||||||||||||||| |   |||||||| |||||| ||||||    
T  4595935 -------tttgggaattagatttagaagttgtaattggttgatttaagagtagataatccgatgaatt 4595995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 185
Target Start/End: Original strand, 7320589 - 7320716
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgg 156  Q
    |||||||||||||||||||||||||| | | |||||||||||| |||| ||||||||| |||| |||| || ||||||| |||||||| |||||||||||    
T  7320589 caatctaaggtaagggtgggactaacctacactaattctaagt-gtattattctgaaaattgaatttaacaggttgtagattgtagttttgggaatttgg 7320687  T
Q  157 gaattaggttttgaagttgtaattggttg 185  Q
    |||||| |||| || ||||||||||||||    
T  7320688 gaattatgtttagatgttgtaattggttg 7320716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 185
Target Start/End: Complemental strand, 22350777 - 22350646
Alignment:
Q  54 cgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaat 152  Q
    |||||||||||||||||||||||||||||| |||  ||||||| |||  ||| ||||||||| |||| |||| || |||||||||||||||| |||||||    
T  22350777 cgatcaatctaaggtaagggtgggactaaccttcaataattctgagta-tatgattctgaaaattgaatttaacaagttgtaggttgtagttttgggaat 22350679  T
Q  153 ttgggaattaggttttgaagttgtaattggttg 185  Q
    |||||||||||| || ||||||| || ||||||    
T  22350678 ttgggaattagggttagaagttgcaaatggttg 22350646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 144
Target Start/End: Original strand, 21239039 - 21239130
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||||||||||||    
T  21239039 tcgatcaatctaaggtatgggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtt 21239130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 166
Target Start/End: Complemental strand, 42697846 - 42697732
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || |||||||||||||| ||||||| |||| |||||||||||||||||||||||| |||||  |||| ||||||||||||||||||| || | |    
T  42697846 tcgattaacctaaggtaagggtgagactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggttgtagttttgagga 42697747  T
Q  152 tttgggaattaggtt 166  Q
    |||| ||||||||||    
T  42697746 tttgagaattaggtt 42697732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 51336532 - 51336479
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51336532 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaa 51336479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 12327742 - 12327795
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  12327742 ctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaa 12327795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 187
Target Start/End: Original strand, 44822021 - 44822145
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    ||||||||| ||||||||||| |||  ||||||| | || ||| ||| ||||| |||  |||| || || ||||||||||||| ||| ||||||||||||    
T  44822021 taaggtaagagtgggactaaccttcaataattctga-ttatatgattatgaaaattggatttaacaggtggtaggttgtagttctggaaatttgggaatt 44822119  T
Q  162 aggttttgaagttgtaattggttgtt 187  Q
    |||||| |||||||||||||||||||    
T  44822120 aggtttagaagttgtaattggttgtt 44822145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 115
Target Start/End: Complemental strand, 50544941 - 50544872
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  50544941 tccttcgtcgatcaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 50544872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 166
Target Start/End: Complemental strand, 45755582 - 45755468
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || |||||||||||||| ||||||| |||| ||||| |||||| ||| |||||| ||| ||  |||| || |||||||||||||||| || |||    
T  45755582 tcgattaacctaaggtaagggtgagactaaccttctttaattataagttatatgattctgaaaagtggatttaacaagttgtaggttgtagttttgagaa 45755483  T
Q  152 tttgggaattaggtt 166  Q
    |||| ||||||||||    
T  45755482 tttgagaattaggtt 45755468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 29763631 - 29763684
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  29763631 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 29763684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 46197744 - 46197797
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  46197744 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 46197797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 45499439 - 45499374
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgt 133  Q
    |||||||||| | ||||| ||||||||| || |||||||||||||||||||||||||||||| ||||    
T  45499439 gtaagggtgg-attaactctctctaattttaggttgtataattctgaaattgagtttagcatattgt 45499374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 50001529 - 50001476
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||||||| |||||||||||  | |||||||||||    
T  50001529 ctaaggtaagggtgggactaactttctttaattctaagtattttaattctgaaa 50001476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 28476730 - 28476786
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||  ||||||||||  | ||||||||||||||||||    
T  28476730 aatctaaggtaagggtgggactagatttctctaataatgagttgtataattctgaaa 28476786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 22145666 - 22145718
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||  |  ||||| |||||||||||    
T  22145666 taaggtaagggtgggactaactttctctaataatgggttgtttaattctgaaa 22145718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 38056668 - 38056724
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||| ||||||||| |  |  |||||||||||||||||    
T  38056668 aatctaaggtaagggtgggactagctttctctagtaatgggttgtataattctgaaa 38056724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 635001 - 635052
Alignment:
Q  60 atctaaggtaagggtgggactaactttctctaattctaagttgtataattct 111  Q
    |||||||||||||||| ||||| |||||||||||  || |||||||||||||    
T  635001 atctaaggtaagggtgagactagctttctctaataataggttgtataattct 635052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 93
Target Start/End: Complemental strand, 7703179 - 7703144
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaat 93  Q
    |||||||||||||||||||||||| |||||||||||    
T  7703179 caatctaaggtaagggtgggactagctttctctaat 7703144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 8306662 - 8306588
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgt 133  Q
    ||||||||||||| ||||||||| |||||||||||  |  ||||||||||||| |||  | ||||| ||||||||    
T  8306662 aatctaaggtaagagtgggactagctttctctaataatgggttgtataattctaaaaaggggtttaacatgttgt 8306588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 11946453 - 11946391
Alignment:
Q  103 tataattctgaaattgagtttagcatgttgtaggttgtagttatg-ggaatttgggaattagg 164  Q
    ||||||||||||||||  |||| ||||||||||||| ||||| || ||| |||||||||||||    
T  11946453 tataattctgaaattggatttaacatgttgtaggttatagttttgaggattttgggaattagg 11946391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 17901792 - 17901846
Alignment:
Q  61 tctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  17901792 tctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 17901846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 39243662 - 39243700
Alignment:
Q  48 cttcgtcgatcaatctaaggtaagggtgggactaacttt 86  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  39243662 cttcgtcgatcaatccaaggtaagggtgagactaacttt 39243700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 39247217 - 39247255
Alignment:
Q  48 cttcgtcgatcaatctaaggtaagggtgggactaacttt 86  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  39247217 cttcgtcgatcaatccaaggtaagggtgagactaacttt 39247255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 8276079 - 8276112
Alignment:
Q  152 tttgggaattaggttttgaagttgtaattggttg 185  Q
    |||||||||||||||| |||||||||||||||||    
T  8276079 tttgggaattaggtttagaagttgtaattggttg 8276112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 24727420 - 24727383
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaag 99  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  24727420 ctaaggtaagggtgggactaaccttctttaattctaag 24727383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 38056762 - 38056795
Alignment:
Q  152 tttgggaattaggttttgaagttgtaattggttg 185  Q
    |||||||||||||||| |||||||||||||||||    
T  38056762 tttgggaattaggtttagaagttgtaattggttg 38056795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 12710923 - 12710867
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||| | |||||||| |||||||||||  |  |||||||||||||||||    
T  12710923 aatctaaggtaaagatgggactagctttctctaatattgggttgtataattctgaaa 12710867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 14801384 - 14801337
Alignment:
Q  121 tttagcatgttgtaggttgtagttatgggaatttggg-aattaggtttt 168  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  14801384 tttagcatgttgtaggtt-tagttttgggaatttgggaaattaggtttt 14801337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 14810258 - 14810211
Alignment:
Q  121 tttagcatgttgtaggttgtagttatgggaatttggg-aattaggtttt 168  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  14810258 tttagcatgttgtaggtt-tagttttgggaatttgggaaattaggtttt 14810211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 49 - 228
Target Start/End: Complemental strand, 584 - 405
Alignment:
Q  49 ttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgg 148  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  584 ttcgtcgatcaatctaaggtaagggtgagactaactttctctaattctaagttgtatcattctgaaattgagtttagcatgttgtaggttgtagttatga 485  T
Q  149 gaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  484 gaatttggaaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 53 - 228
Target Start/End: Original strand, 13382 - 13557
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaat 152  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13382 tcgatcaatctaaggtaagggtgggactaactttctctaattccaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttttgggaat 13481  T
Q  153 ttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13482 ttgggaattaggttttgaagttataattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 13557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 164; Significance: 9e-88; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 46 - 237
Target Start/End: Original strand, 20083621 - 20083812
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    |||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20083621 tccttcgtcgatcagtgtaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 20083720  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtccatctcat 237  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  20083721 tgagaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgttcatatcat 20083812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 73 - 228
Target Start/End: Original strand, 5082222 - 5082377
Alignment:
Q  73 gtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaag 172  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5082222 gtgggactaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaag 5082321  T
Q  173 ttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5082322 ttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5082377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 62 - 228
Target Start/End: Complemental strand, 5761586 - 5761421
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5761586 ctaaggtaagggtgggactaactttctctaattctaagt-gtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 5761488  T
Q  162 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5761487 aggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5761421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 42817907 - 42818072
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42817907 taaggtaagggtgggacttactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 42818006  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42818007 gattttgaagttgtaattggttgttaataaagtagaaaatccgttgaatttgtgtagaattgatgt 42818072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 53 - 228
Target Start/End: Original strand, 6101743 - 6101918
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaat 152  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6101743 tcgatcaatctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaattgtgtttagcatgttgtaggttgtagttatgggaat 6101842  T
Q  153 ttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  6101843 ttgggaatcaggttttgaagttataattggttgttaatagagtagaaaatctattgaatttgtgtagtattgatgt 6101918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 63 - 221
Target Start/End: Complemental strand, 19140816 - 19140659
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19140816 taaggtaagggtgggacta-ctttctctaattctaagttgtataattctgaaattgagtttagcaagttgtaggttgtagttatgggaatttgggaatta 19140718  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19140717 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 19140659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 67 - 228
Target Start/End: Original strand, 6573060 - 6573221
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 166  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6573060 gtaagggtgagactaactttctctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatgaggtt 6573159  T
Q  167 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6573160 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 6573221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 39936007 - 39936175
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt---gtaggttgtagttatgggaatttgggaa 159  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||   |||||||||||||||||||||||| |||    
T  39936007 taaggtaagggtgggattaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgttgtaggttgtagttatgggaatttgcgaa 39936106  T
Q  160 ttaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  39936107 ttaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtacaattgatgt 39936175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 67 - 228
Target Start/End: Complemental strand, 37292753 - 37292593
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 166  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  37292753 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 37292654  T
Q  167 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  37292653 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 37292593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 67 - 228
Target Start/End: Complemental strand, 6202824 - 6202664
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 166  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  6202824 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 6202725  T
Q  167 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  6202724 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 6202664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 58 - 217
Target Start/End: Original strand, 20397505 - 20397656
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 157  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||     || || ||||||    
T  20397505 caatctaaggtaagggtgggattaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt----gttgt-----tgtgattttggg 20397595  T
Q  158 aattaggttttgaagttgtaatt-ggttgttaatagagtagaaaatccgttgaatttgtgt 217  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  20397596 aattaggttttaaagttgtaattaggttgttaatagagtagaaaatccattgaatttgtgt 20397656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 31722476 - 31722661
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| || |||| || |||| || ||||||||||||||||    
T  31722476 tccttcgtcgatcaatctaagataagggtgggactaactttctctaattctaagtggtataattttgaaaatcgaatttaacaagttgtaggttgtagtt 31722575  T
Q  145 atgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtcca 231  Q
     ||||||||||| |||| ||||| ||||||||||||||||| |   ||||||| ||||| ||||||||  ||||||||| |||||||    
T  31722576 ttgggaatttggaaatttggtttagaagttgtaattggttgatttaagagtag-aaatctgttgaattgatgtagaattaatgtcca 31722661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 116 - 237
Target Start/End: Original strand, 20178581 - 20178704
Alignment:
Q  116 ttgagtttagca-tgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaa-ttggttgttaatagagtagaaaatccgttgaattt 213  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  20178581 ttgagtttagcaatgttgtaggttgtagttatgagaatttgggaattaggttttgaagttgtaaattggttgttaatagagtagaaaattcgttgaattt 20178680  T
Q  214 gtgtagaattgatgtccatctcat 237  Q
    ||||||||||||||| ||| ||||    
T  20178681 gtgtagaattgatgttcatatcat 20178704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 56 - 223
Target Start/End: Original strand, 22532125 - 22532292
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttg 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| ||| || |||    
T  22532125 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattg 22532224  T
Q  156 ggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 223  Q
    ||||||||||||  |||||||||||| |||||   | ||||||||||  |||||||| ||||||||||    
T  22532225 ggaattaggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaatt 22532292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 56 - 223
Target Start/End: Original strand, 22536810 - 22536977
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttg 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| ||| || |||    
T  22536810 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattg 22536909  T
Q  156 ggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 223  Q
    ||||||||||||  |||||||||||| |||||   | ||||||||||  |||||||| ||||||||||    
T  22536910 ggaattaggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaatt 22536977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 45469209 - 45469342
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||| || |||| || |||||||||| ||||| ||  ||    
T  45469209 tcgatcaatctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttatagttttgtaaa 45469308  T
Q  152 tttgggaattaggttttgaagttgtaattggttg 185  Q
    ||||||||||| |||| |||||||||||||||||    
T  45469309 tttgggaattatgtttagaagttgtaattggttg 45469342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 36727028 - 36727151
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||  |||| || |||||||||||||||| | || |    
T  36727028 tcgatcaatctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattggatttaacaagttgtaggttgtagtttttggga 36727127  T
Q  152 tttgggaattaggttttgaagttg 175  Q
    |||| ||||||||||| |||||||    
T  36727128 tttgagaattaggtttagaagttg 36727151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 22317904 - 22318033
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaattt 154  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || ||| ||||||||||||  ||||||||    
T  22317904 atcaatctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttctaggttgtagtttcgggaattt 22318002  T
Q  155 gggaattaggttttgaagttgtaattggttg 185  Q
    |||| |||||||| |||||||||||||||||    
T  22318003 gggatttaggtttagaagttgtaattggttg 22318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 17906839 - 17906953
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaat 152  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || |||||||||||||||  |||| ||    
T  17906839 tcgattaacctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaagttgtaggttgtagtgttggggat 17906938  T
Q  153 ttgggaattaggttt 167  Q
    ||| |||||||||||    
T  17906939 ttgagaattaggttt 17906953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 59 - 185
Target Start/End: Original strand, 20022036 - 20022155
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggg 157  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || |||| || |||||||||||||||        ||||||    
T  20022036 aatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagt--------tttggg 20022127  T
Q  158 aattaggttttgaagttgtaattggttg 185  Q
    |||||||||| |||||||||||||||||    
T  20022128 aattaggtttagaagttgtaattggttg 20022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 39694276 - 39694437
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    |||| ||||||| | ||||| |||||||||||| |||||||||| ||||||||| ||  |||| || |||||||||||||||| ||||||||||||||||    
T  39694276 ctaatgtaagggcgtgactagctttctctaattataagttgtatgattctgaaactggatttaacaagttgtaggttgtagttttgggaatttgggaatt 39694375  T
Q  162 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 223  Q
    ||| || || ||||||||| |||||    | |||||| |||| |||||||| ||||||||||    
T  39694376 agggttagacgttgtaattagttgtcgtaatagtagagaatctgttgaattggtgtagaatt 39694437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 23899977 - 23900100
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||  ||||| ||||| |||||| |||| || |||||||| ||||||| |||| |    
T  23899977 tcgatcaatctaaggtaagggtgtgactaactttctctaattctaagtgatataactctgagaattgaatttaacaagttgtaggctgtagttttgggga 23900076  T
Q  152 tttgggaattaggttttgaagttg 175  Q
    |||| ||| ||||||| |||||||    
T  23900077 tttgagaactaggtttagaagttg 23900100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 4380616 - 4380669
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4380616 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 4380669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 166
Target Start/End: Complemental strand, 19700223 - 19700109
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || |||||||||||||||||||||| |||| |||||||||||||||||||||| | ||| |  |||| ||||||||||||||||||| || | |    
T  19700223 tcgattaacctaaggtaagggtgggactaaccttctttaattctaagttgtataattctaagaatcggatttaacatgttgtaggttgtagttttgagga 19700124  T
Q  152 tttgggaattaggtt 166  Q
    |||| | ||||||||    
T  19700123 tttgaggattaggtt 19700109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 166
Target Start/End: Complemental strand, 23948325 - 23948211
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || ||||||||||||||| |||||| |||| |||||||||||||||| |||||| ||| ||  |||| || |||||||||||||||| |||| |    
T  23948325 tcgattaacctaaggtaagggtggtactaaccttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttgggga 23948226  T
Q  152 tttgggaattaggtt 166  Q
    |||| ||||||||||    
T  23948225 tttgagaattaggtt 23948211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 23419494 - 23419411
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagtt 144  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||  |||| ||| ||||||| |||||||    
T  23419494 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatattgtaggatgtagtt 23419411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 42265502 - 42265631
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaattt 154  Q
    ||||||| |||||||||||||||||||| ||   ||| ||| |||  ||| ||||||||| |||| |||| || |||||||||||||||| |||||||||    
T  42265502 atcaatccaaggtaagggtgggactaacctttaataagtctgagta-tatgattctgaaaattgaatttaacaagttgtaggttgtagttttgggaattt 42265600  T
Q  155 gggaattaggttttgaagttgtaattggttg 185  Q
    |||||||||| || ||||||| || ||||||    
T  42265601 gggaattagggttagaagttgcaaatggttg 42265631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 17218754 - 17218649
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgag-tttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    |||| |||||||||||||||||||||||| ||||||||  ||||||||||||| | || |||||||  ||||||||||| ||| || | ||||| |||||    
T  17218754 taagataagggtgggactaactttctctagttctaagtattataattctgaaaattagatttagcaatttgtaggttgttgttttgaggatttgagaatt 17218655  T
Q  162 aggttt 167  Q
    ||||||    
T  17218654 aggttt 17218649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 22583650 - 22583727
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgt 130  Q
    ||||| || ||||||||||||||||| |||| |||| |||||||| ||||||||||||||||||||| |||| |||||    
T  22583650 tcgattaacctaaggtaagggtgggattaacattctttaattctaggttgtataattctgaaattgaatttaacatgt 22583727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 23889861 - 23889784
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgt 130  Q
    ||||| || ||||| |||||||| || |||||||||||||||||| ||||||||||||||||||||| |||| |||||    
T  23889861 tcgattaacctaagctaagggtgagattaactttctctaattctaggttgtataattctgaaattgaatttaacatgt 23889784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 18761500 - 18761448
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  18761500 taaggtaagggtgcgactaactttctctaattctaagtggtataattctgaaa 18761448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 139
Target Start/End: Complemental strand, 22254828 - 22254741
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttg 139  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||||  |||||||||| ||||||  |||| || |||||||||||    
T  22254828 tcgattaacctaaggtaatggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttg 22254741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 36305903 - 36305837
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgt 133  Q
    ||||||||| || ||||||||| ||||| || ||||||||||| |||||||||||||||||||||||    
T  36305903 gtaagggtgtgattaactttctttaattttaggttgtataattatgaaattgagtttagcatgttgt 36305837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 115
Target Start/End: Original strand, 18816278 - 18816347
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||   |  |||||||||||||||||    
T  18816278 tccttcgtcgatcaatataaggtaagggtgggactagctttctctaaaaatgggttgtataattctgaaa 18816347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 26454761 - 26454708
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  26454761 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 26454708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 17158962 - 17159000
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagt 100  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17158962 ctaaggtaagggtgggactaactttctctaattctaagt 17159000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 23479135 - 23479097
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagt 100  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23479135 ctaaggtaagggtgggactaactttctctaattctaagt 23479097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 19880875 - 19880838
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaag 99  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19880875 ctaaggtaagggtgggactaactttctctaattctaag 19880838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 22610262 - 22610315
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattct 111  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||| |||||    
T  22610262 caatctaaggtaagggtgggactaactttctctaataatgagttgtatgattct 22610315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 22208325 - 22208269
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  22208325 aatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 22208269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 34758915 - 34758875
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataa 107  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  34758915 gtaagggtgggactaactttctctaattctacgttgtataa 34758875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 25657511 - 25657566
Alignment:
Q  60 atctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||| |||||||||||| |||||||||||||||||||||  | |||||||||||    
T  25657511 atctaaagtaagggtgggagtaactttctctaattctaagtattttaattctgaaa 25657566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 3273944 - 3273819
Alignment:
Q  61 tctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggg-a 158  Q
    ||||||||||||||||||||||| ||   ||||| |  ||  ||| ||||||||| |||| |||| || ||||| |||||||||| |||||||||||| |    
T  3273944 tctaaggtaagggtgggactaacctttaataattatgtgta-tatgattctgaaaattgaatttaacaggttgtgggttgtagttttgggaatttgggaa 3273846  T
Q  159 attaggttttgaagttgtaattggttg 185  Q
    |||||| || |||||||| ||||||||    
T  3273845 attagggttagaagttgtgattggttg 3273819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 21399777 - 21399739
Alignment:
Q  55 gatcaatctaaggtaagggtgggactaactttctctaat 93  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  21399777 gatcaatctaaggtaagggtgggactagctttctctaat 21399739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 21794270 - 21794232
Alignment:
Q  55 gatcaatctaaggtaagggtgggactaactttctctaat 93  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  21794270 gatcaatctaaggtaagggtgggactagctttctctaat 21794232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 12577932 - 12577880
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||| ||||    
T  12577932 ctaaggtaagggtgggactaactttctctaataat-agttgtataattccgaaa 12577880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 16198889 - 16198851
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagt 100  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  16198889 ctaaggtaaaagtgggactaactttctctaattctaagt 16198851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 22345220 - 22345186
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaat 93  Q
    ||||||||||||||||||||||| |||||||||||    
T  22345220 aatctaaggtaagggtgggactagctttctctaat 22345186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 22356880 - 22356846
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaat 93  Q
    ||||||||||||||||||||||| |||||||||||    
T  22356880 aatctaaggtaagggtgggactagctttctctaat 22356846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 36732411 - 36732473
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttta 124  Q
    |||||||||||||| ||||| |||||||||||  |  |||||||||||||||||  |||||||    
T  36732411 ctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagagttta 36732473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 44522172 - 44522233
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattg 118  Q
    |||||||||||||||||||||||||| | |||  ||||  |||||| ||||||||||||||||    
T  44522172 atcaatctaaggtaagggtgggactatcattcagtaatcttaagtt-tataattctgaaattg 44522233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 22474815 - 22474778
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaat 93  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  22474815 atcaatctaaggtaagggtgggactaaccttctttaat 22474778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 22483994 - 22483942
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattct 111  Q
    |||||||||||||| | |||||||||||||||||||  | ||||||||||||||    
T  22483994 caatctaaggtaagcg-gggactaactttctctaataatgagttgtataattct 22483942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 83
Target Start/End: Complemental strand, 23914945 - 23914912
Alignment:
Q  50 tcgtcgatcaatctaaggtaagggtgggactaac 83  Q
    ||||||||||||| ||||||||||||||||||||    
T  23914945 tcgtcgatcaatccaaggtaagggtgggactaac 23914912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 36405125 - 36405162
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaat 93  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  36405125 atcaatctaaggtaagggtgtgactaactttctttaat 36405162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 21514743 - 21514695
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattct 111  Q
    |||||||||||||||||||  ||||||||||  | ||||||||||||||    
T  21514743 taaggtaagggtgggactagatttctctaataatgagttgtataattct 21514695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 22483834 - 22483786
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  22483834 gtaagggtgggactagctttctctaataatgggttgtataattctgaaa 22483786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 23943826 - 23943866
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgt 103  Q
    |||||||||||||||  || |||||||||||||||||||||    
T  23943826 taaggtaagggtgggtatagctttctctaattctaagttgt 23943866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 53 - 228
Target Start/End: Complemental strand, 146785 - 146610
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaat 152  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146785 tcgatcaatctaaggtatgggtgggactaacttactctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaat 146686  T
Q  153 ttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  146685 ttgggaattaggttttgaagttataattggttgttaatagagtaggaaatccgttgaatttgtgtagaattgatgt 146610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 468 - 633
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  468 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 567  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  568 ggttttgaagttgtaattggttgttaatagagtagaaaataagttgaatttgtgtagaattgatgt 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 62 - 228
Target Start/End: Original strand, 695 - 861
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  695 ctaaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatt 794  T
Q  162 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  795 aggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 155; Significance: 2e-82; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 62 - 228
Target Start/End: Original strand, 168998 - 169164
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  168998 ctaaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 169097  T
Q  162 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  169098 aggttttgaacttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 169164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 49 - 228
Target Start/End: Complemental strand, 143677 - 143498
Alignment:
Q  49 ttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgg 148  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  143677 ttcgtcgatcaatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttattt 143578  T
Q  149 gaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
     ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  143577 taatttgggaattatgttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 143498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 1257 - 1092
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  1257 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttattgtaatttgggaatta 1158  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1157 ggttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtagaattgatgt 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 154; Significance: 8e-82; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 4714 - 4879
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4714 taaggtaagggtcggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggtcgtagttatgggaatttgggaatta 4813  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4814 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 5821 - 5941
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgg-gaattagg 164  Q
    ||||| ||| |||||||||||  |||||||||||||| |||||||| ||||||  |||  || ||||| |||||||||| |  ||||||||  |||||||    
T  5821 gtaagtgtgagactaactttccttaattctaagttgtgtaattctgaaaattggatttgacaggttgtgggttgtagttttcagaatttggaaaattagg 5920  T
Q  165 ttttgaagttgtaattggttg 185  Q
     || ||||||| |||||||||    
T  5921 gttagaagttgaaattggttg 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 11274 - 11439
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11274 taaggtaagggtgagactaactttctctaattctaagttgtatatttctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 11373  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11374 agttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 11439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 58798 - 58633
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  58798 taaggtaagggtgggactaactttctctaattctaagttgtacaattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaatta 58699  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  58698 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtatagaattgatgt 58633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 154; Significance: 8e-82; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 77743 - 77574
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 158  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  77743 aatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgaga 77644  T
Q  159 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  77643 attaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtataattgatgt 77574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 32046 - 31881
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32046 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttataggttgtagttatgggaatttgggaatta 31947  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  31946 ggttttgaagttgtaattggttgttaatagagcagaaaattcgttgaatttgtgtagaagtgatgt 31881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 37353 - 37188
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37353 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttataggttgtagttatgggaatttgggaatta 37254  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  37253 ggttttgaagttgtaattggttgttaatagagcagaaaattcgttgaatttgtgtagaagtgatgt 37188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 152104 - 152177
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgt 130  Q
    |||||||||||||||||||||||||| | |||  ||||  |||||| ||||||||||||||||| |||| |||||    
T  152104 atcaatctaaggtaagggtgggactatcattcagtaatcttaagtt-tataattctgaaattgaatttaacatgt 152177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 151; Significance: 5e-80; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 66 - 228
Target Start/End: Complemental strand, 5432 - 5270
Alignment:
Q  66 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5432 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 5333  T
Q  166 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5332 tttgaagtcgtaattggttgttaatagagtagaaaatcctttgaatttgtgtagaattgatgt 5270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 59 - 223
Target Start/End: Original strand, 12529 - 12693
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 158  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12529 aatccaaggtaagggtgggaataactttctctaattctaagttgtataattctgaaattgagtttagcatgttataggttgtagttatgggaatttggga 12628  T
Q  159 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12629 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtatagaatt 12693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 34391 - 34226
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34391 taaggtaagggtgggactaactttctctaattctaatttgtttaattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatca 34292  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  34291 ggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaattgatgt 34226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 6003 - 5921
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtt 144  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||    
T  6003 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattgaatttaacatgttgtaggatgtagtt 5921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 5e-77; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 59 - 228
Target Start/End: Original strand, 21300040 - 21300209
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 158  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||    
T  21300040 aatctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaattaagtttagcatgttgtaggtagtagttatgggaatttgaga 21300139  T
Q  159 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  21300140 attaggttttgaagttgtaattggttgttaatagagtagaaaatctgttaaatttgtgtagaattgatgt 21300209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 67 - 214
Target Start/End: Complemental strand, 7485050 - 7484903
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 166  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  7485050 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 7484951  T
Q  167 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7484950 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 7484903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 46 - 224
Target Start/End: Complemental strand, 20566615 - 20566445
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20566615 tccttcgtcaatcaatctaaggtaagggtgagactaactttctctaattcaaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 20566516  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 224  Q
    ||||        |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  20566515 tggg--------aattaggttttgaagttgtaattggttgttaatagaatagaaaatccgtagaatttgtgtagaattg 20566445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 73 - 228
Target Start/End: Complemental strand, 19921680 - 19921525
Alignment:
Q  73 gtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaag 172  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||    
T  19921680 gtgggactacctttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtaattatggaaatttgggaattaggttttgaag 19921581  T
Q  173 ttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    || ||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  19921580 ttataattagttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 19921525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 59 - 212
Target Start/End: Complemental strand, 31622173 - 31622028
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 158  Q
    |||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||| | |||||        |||||||||    
T  31622173 aatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgta--------aatttggga 31622082  T
Q  159 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatt 212  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  31622081 attaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatt 31622028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 46 - 187
Target Start/End: Original strand, 36508616 - 36508757
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||||||||||||     
T  36508616 tccttcgtcgattaatttaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaacaggtggtaggttgtagttt 36508715  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgtt 187  Q
    ||| ||||||||||||| |||| |||||||||||||||||||    
T  36508716 tggaaatttgggaattatgtttagaagttgtaattggttgtt 36508757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 181
Target Start/End: Original strand, 21617918 - 21618047
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattct-gaaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||| |||  ||||||| |||| || |||||||||||||||| ||||||    
T  21617918 tcgataaatctaaggtaagggtgggactaactttctctaattctaagtgatataactctaaaaattgaatttaacaagttgtaggttgtagttttgggaa 21618017  T
Q  152 tttgggaattaggttttgaagttgtaattg 181  Q
    |||| |||||||| || ||||||| |||||    
T  21618018 tttgagaattagggttagaagttgaaattg 21618047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 20469166 - 20469281
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||| ||||||  |||| || |||||||||||||||| |||| |    
T  20469166 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttgggga 20469265  T
Q  152 tttgggaattaggttt 167  Q
     ||| |||||||||||    
T  20469266 cttgagaattaggttt 20469281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 187
Target Start/End: Complemental strand, 31457013 - 31456888
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    |||||||||||||| |||||||||||||||||| ||||| |||| ||||||||| ||  |||| ||    ||||||||||||| ||| ||||||| ||||    
T  31457013 ctaaggtaagggtgagactaactttctctaattttaagtggtatgattctgaaactggatttaacacaaggtaggttgtagttttggaaatttggaaatt 31456914  T
Q  162 aggttttgaagttgtaattggttgtt 187  Q
    |||||| |||||||||||||||||||    
T  31456913 aggtttagaagttgtaattggttgtt 31456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 6551280 - 6551342
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6551280 tcgatcaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 6551342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 181
Target Start/End: Complemental strand, 22111876 - 22111762
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 166  Q
    |||||||||||| ||||||||||||||| |  ||||||||||| ||||||||||||||||||||||| | ||||   | || ||||||| ||||||||||    
T  22111876 gtaagggtgggattaactttctctaatttttggttgtataattttgaaattgagtttagcatgttgttgtttgtgaatttgcgaatttgagaattaggtt 22111777  T
Q  167 ttgaagttgtaattg 181  Q
    || |||| |||||||    
T  22111776 ttcaagtcgtaattg 22111762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 166
Target Start/End: Complemental strand, 10954142 - 10954038
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    |||||||||||||||||||||| |||  |||||||||||||| ||||| ||||||||  |||| ||||||||||| ||||||| |||  ||||  |||||    
T  10954142 ctaaggtaagggtgggactaaccttccttaattctaagttgtgtaattatgaaattggatttaacatgttgtaggatgtagttttggagatttaagaatt 10954043  T
Q  162 aggtt 166  Q
    |||||    
T  10954042 aggtt 10954038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 10774663 - 10774771
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaat 160  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||| |||||| ||||||| |||| |||| ||||| |||||||| || ||||| ||||||    
T  10774663 ctaaggtaagggtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacatg-tgtagattgtagttttgtgaattcgggaat 10774760  T
Q  161 taggttttgaa 171  Q
    |||| ||||||    
T  10774761 tagggtttgaa 10774771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 18744936 - 18744874
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||  |  |||||||||||||||||    
T  18744936 tcgatcaatctaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaa 18744874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 21405618 - 21405751
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || |||||||||||||| ||||||| ||   ||||||| |||  ||| ||||||||| |||| |||| || ||||| |||||||||| ||||||    
T  21405618 tcgattaacctaaggtaagggtgagactaacctttaataattctgagta-tatgattctgaaaattgaatttaacaggttgtgggttgtagttttgggaa 21405716  T
Q  152 tttggg-aattaggttttgaagttgtaattggttg 185  Q
    |||||| ||||||| || |||||||||||||||||    
T  21405717 tttgggaaattagggttagaagttgtaattggttg 21405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 17011781 - 17011728
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  17011781 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 17011728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 30616663 - 30616614
Alignment:
Q  66 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  30616663 ggtaagggtgggactgactttctctaattctaagttgtatgattctgaaa 30616614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 266090 - 266038
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  266090 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 266038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 186
Target Start/End: Complemental strand, 17876259 - 17876132
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggg 157  Q
    ||||||| |||||||||  |||||| |||  ||||||| |||  ||| ||||||||| |||  |||| || || ||||||||||||| ||  ||||||||    
T  17876259 aatctaatgtaagggtgaaactaaccttcaataattctgagta-tatgattctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttggg 17876161  T
Q  158 aattaggttttgaagttgtaattggttgt 186  Q
    |||||||||| ||||||||||||||||||    
T  17876160 aattaggtttagaagttgtaattggttgt 17876132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 144
Target Start/End: Original strand, 25249818 - 25249910
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||| || ||||||||||||| |||||||| |||| ||||| |||||| |||||||||| ||||||  |||| ||||||||||||| |||||    
T  25249818 tcgattaacctaaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25249910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 144
Target Start/End: Original strand, 25313602 - 25313694
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||| || ||||||||||||| |||||||| |||| ||||| |||||| |||||||||| ||||||  |||| ||||||||||||| |||||    
T  25313602 tcgattaacctaaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 183
Target Start/End: Original strand, 31251931 - 31252011
Alignment:
Q  103 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggt 183  Q
    ||||||||||||||||  |||| || ||| |||||||||||| | |||||||| ||||||||||| |||||| ||||||||    
T  31251931 tataattctgaaattggatttaacaggttataggttgtagttttaggaatttgagaattaggtttagaagttataattggt 31252011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 16063808 - 16063755
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattct 111  Q
    |||||||||||||||||||||||| |||||||||||  |  |||||||||||||    
T  16063808 caatctaaggtaagggtgggactacctttctctaataatgggttgtataattct 16063755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 22111764 - 22111715
Alignment:
Q  167 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 216  Q
    ||||||| |||||||||||||||||||| |||||||||  ||||||||||    
T  22111764 ttgaagtcgtaattggttgttaatagagcagaaaatccaatgaatttgtg 22111715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 23199207 - 23199259
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  23199207 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 23199259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 187
Target Start/End: Original strand, 30138059 - 30138098
Alignment:
Q  148 ggaatttgggaattaggttttgaagttgtaattggttgtt 187  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  30138059 ggaaattgggaattaggtttagaagttgtaattggttgtt 30138098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 10753905 - 10753867
Alignment:
Q  48 cttcgtcgatcaatctaaggtaagggtgggactaacttt 86  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  10753905 cttcgtcgatcaatccaaggtaagggtgagactaacttt 10753867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 32607312 - 32607346
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaat 93  Q
    ||||||||||||||||||||||| |||||||||||    
T  32607312 aatctaaggtaagggtgggactagctttctctaat 32607346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 29448893 - 29448840
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||| | || ||||||||||||||||||||||||  | |||||||||||    
T  29448893 ctaaggtaatgatgagactaactttctctaattctaagtaatttaattctgaaa 29448840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 1627071 - 1627115
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattct 111  Q
    ||||||||||||||| |||||||||||  | ||||||||||||||    
T  1627071 gtaagggtgggactagctttctctaataatgagttgtataattct 1627115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 62 - 228
Target Start/End: Complemental strand, 1218 - 1052
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  1218 ctaaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaattgaatttagcatgttttaggttgtagttatgggaatttgggaatt 1119  T
Q  162 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1118 aggttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtagaattgatgt 1052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 138; Significance: 3e-72; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 62 - 228
Target Start/End: Original strand, 328287 - 328455
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattct--aagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaa 159  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||    
T  328287 ctaaggtaagggtgggactaactttctctaattctctaagttgtataattctgaaattgagtttagcatgttgaagattgtagttatggaaatttgggaa 328386  T
Q  160 ttaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  328387 ttaggtttcgaagttgtaattggttgttaatagagtagaaaatcagttgaatttgtgtagaattgatgt 328455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 67 - 216
Target Start/End: Complemental strand, 75834 - 75691
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 166  Q
    |||||||||||| ||||||||||||||  || ||||||||||||||||||||||| ||||||||||| | |||||  | || ||||||||||||||||||    
T  75834 gtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagtgtagcatgttgttgtttgtaaatttgtgaatttgggaattaggtt 75735  T
Q  167 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 216  Q
          ||||||||||||||||||||| |||||||||| |||||||||||    
T  75734 ------ttgtaattggttgttaatagaatagaaaatccattgaatttgtg 75691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 71 - 218
Target Start/End: Complemental strand, 72980 - 72841
Alignment:
Q  71 gggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttga 170  Q
    |||||||| |||||||||| |||  || ||||||||||||| ||||||||||||| ||||||| | | ||        ||||||| ||||||||||||||    
T  72980 gggtgggattaactttctccaatcttaggttgtataattctaaaattgagtttagtatgttgttgttagt--------gaatttgtgaattaggttttga 72889  T
Q  171 agttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 218  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  72888 agttgtaattggttgttaatagaatagaaaatccattgaatttgtgta 72841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 110222 - 110121
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 165  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||| ||||||| |||| || |||||||||||||||| |||| ||||| | |||||||    
T  110222 gtaagggtgagactaactttctctaattctaagtgatataattctgaaaattgaatttaacaagttgtaggttgtagttttggggatttgaggattaggt 110123  T
Q  166 tt 167  Q
    ||    
T  110122 tt 110121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 133
Target Start/End: Complemental strand, 73139 - 73069
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgt 133  Q
    |||||||||||||||||||||||||||||||  | |||||||| ||||| |||  | ||||| ||||||||    
T  73139 taaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaacatgttgt 73069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 111422 - 111382
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaat 93  Q
    ||||| ||||||||||||||||||| ||| |||||||||||    
T  111422 tcgattaatctaaggtaagggtggggctagctttctctaat 111382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 134; Significance: 7e-70; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 49 - 202
Target Start/End: Original strand, 29559 - 29711
Alignment:
Q  49 ttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgg 148  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29559 ttcgtcgatcaatctaaggtaagggtgggactaactttctataattctaagttgtataattctgaaattgagtttagcatgtcgtaggttgtagttatgg 29658  T
Q  149 gaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaat 202  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  29659 gaatttgggaattaggttttgaagttgtaattggttgtaaatag-gtagaaaat 29711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 53 - 187
Target Start/End: Complemental strand, 21673 - 21539
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaat 152  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||| ||  |||| ||  | |||| |||||||| ||| |||    
T  21673 tcgatcaatctaaggtaagggtgggactagctttctctaattctaagttgtatgattcagaaactggatttaacagatggtagcttgtagttttggaaat 21574  T
Q  153 ttgggaattaggttttgaagttgtaattggttgtt 187  Q
    |||||||||| |||| |||||||||||||||||||    
T  21573 ttgggaattatgtttagaagttgtaattggttgtt 21539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 21793 - 21958
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  21793 taaggtaatggtgggactaaatttctctaattctaagttgtatagttctgaaattgaatttagcatgttgtaggttgtatttatgggaatttgggaatta 21892  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 228  Q
    |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  21893 ggttttgaagttgtaattggttgttaatagagtaaaaaataagttgaatttgtgtagaattgatgt 21958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 46 - 189
Target Start/End: Complemental strand, 35559 - 35418
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||     
T  35559 tccttcgatgatcaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggt--tagttt 35462  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgttaa 189  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  35461 tgggaatttgggaattaggttttgaagtcgtaattggttgttaa 35418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 58 - 224
Target Start/End: Complemental strand, 19810 - 19652
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 157  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||        |||||||||    
T  19810 caatctaaggtaagggtgagactgactttctctaattctaagttgtataattctcaaattgagtttagcaagttgtaggctgt--------gaatttggg 19719  T
Q  158 aattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 224  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19718 aattaggtttttaagttgtaattggttgttaatagagtagaaaatccattgaatttgtgtagaattg 19652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 63 - 176
Target Start/End: Original strand, 78185 - 78298
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  78185 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaatta 78284  T
Q  163 ggttttgaagttgt 176  Q
    ||||||||||||||    
T  78285 ggttttgaagttgt 78298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 24131 - 24235
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24131 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 24230  T
Q  163 ggttt 167  Q
    |||||    
T  24231 ggttt 24235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 30140 - 30023
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||| |||||||||||||||||||| |||  ||| |||||||  | |||||||| ||||||  |||| ||||||||||||| |||||    
T  30140 tccttcgtcgatcaatccaaggtaagggtgggactaaccttcaataaatctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagtt 30042  T
Q  145 atgggaatttgggaattag 163  Q
     || | |||||||||||||    
T  30041 ttgaggatttgggaattag 30023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 63 - 224
Target Start/End: Complemental strand, 79101 - 78955
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 162  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||        |||||||||    
T  79101 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt-------gtagtta--------tgggaatta 79017  T
Q  163 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 224  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  79016 ggttttgaagttgtaattggttgttaataaagtagaaaatccattgaatttgtgtagaattg 78955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 94; Significance: 5e-46; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 53 - 223
Target Start/End: Original strand, 112956 - 113127
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa--ttgagtttagcatgttgtaggttgtagttatggga 150  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||  ||||| |||||||  |||| |||| || ||||||||||||| || |||||    
T  112956 tcgatcaatctaagataagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgtaggttgtaattttggga 113055  T
Q  151 atttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 223  Q
    ||||||||||||||||| ||||||||||||||||||| | | ||||||||||  |||||||| ||||||||||    
T  113056 atttgggaattaggtttagaagttgtaattggttgttta-acagtagaaaatttgttgaattggtgtagaatt 113127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 81619 - 81501
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattct-gaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    ||||||||||||||||||||| ||| ||||||||||  || || |||||  ||||||| |||| || |||||||||||||||| ||||||||||||||||    
T  81619 taaggtaagggtgggactaaccttcactaattctaa-atggatgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 81521  T
Q  162 aggttttgaagttgtaattg 181  Q
    |||||| |||||||||||||    
T  81520 aggtttagaagttgtaattg 81501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 223
Target Start/End: Original strand, 117797 - 117960
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg--aaattgagtttagcatgttgtaggttgtagttatggga 150  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||  ||||| ||||  ||||||| |||| || |||| || |||||        |    
T  117797 tcgataaaactaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgaagattgta--------a 117888  T
Q  151 atttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 223  Q
     |||||||||||||||| ||||||||||||||||||| | | |||||||||||  ||||||| | ||||||||    
T  117889 ttttgggaattaggtttagaagttgtaattggttgttta-acagtagaaaatctattgaattggcgtagaatt 117960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 46 - 183
Target Start/End: Original strand, 4692 - 4830
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| || ||||||||||| ||||    
T  4692 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagtagtataattctgaaaattgaatttaacaagttgtaggttgaagtt 4791  T
Q  145 atgggaatttgggaattaggttttgaagttgtaattggt 183  Q
       ||||||||| |||||||||| |||||||| ||||||    
T  4792 tgtggaatttggaaattaggtttagaagttgtcattggt 4830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 58 - 224
Target Start/End: Complemental strand, 2946 - 2787
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 157  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||| | ||||        ||||||| |    
T  2946 caatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgtg 2855  T
Q  158 aattaggttttgaagttgt-aattggttgttaatagagtagaaaatccgttgaatttgtgtagaattg 224  Q
    |||||||||||||| | || ||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  2854 aattaggttttgaattagtaaattggttgttaatagaatagaaaatcctttgaatttgtgtataattg 2787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 2611 - 2524
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttat 146  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2611 aatctacggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttat 2524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 46 - 187
Target Start/End: Original strand, 106034 - 106175
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta 145  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||| ||  |||| || || ||||  |||||||     
T  106034 tccttcgtcgatcaatctaaggtaagggtgtgactaactttctctaattctaagttgtatgattcggaaactggatttaacaggtggtagactgtagttt 106133  T
Q  146 tgggaatttgggaattaggttttgaagttgtaattggttgtt 187  Q
    ||| |||||||||||||||||| || ||||||||||||||||    
T  106134 tggaaatttgggaattaggtttagacgttgtaattggttgtt 106175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 187
Target Start/End: Original strand, 6678 - 6809
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttg 155  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||||||||||||| ||| |||||     
T  6678 atcaatatatggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaattta 6777  T
Q  156 ggaattaggttttgaagttgtaattggttgtt 187  Q
    |||||||||||| |||||||||||||||||||    
T  6778 ggaattaggtttagaagttgtaattggttgtt 6809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 10754 - 10913
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||  |||| || |||||||||| ||||| ||||||||||||||||    
T  10754 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaggttgtaggtt-tagtt-tgggaatttgggaatt 10851  T
Q  162 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaatt 223  Q
    ||| || |||||||||||||||||||   | |||||| ||||  ||||||| ||||||||||    
T  10852 agggttagaagttgtaattggttgttgtaatagtagagaatctattgaattggtgtagaatt 10913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 5044 - 5120
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggtt 138  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||  |||| || ||||||||||    
T  5044 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaagttgtaggtt 5120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 1990 - 1937
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||| |||||||||||||||||| |||||||||||||  | |||||||||||    
T  1990 ctaaggaaagggtgggactaactttatctaattctaagtattttaattctgaaa 1937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 53 - 185
Target Start/End: Complemental strand, 8704 - 8571
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||| |||||| ||||||| |||| || |||||||||||||||| ||||||    
T  8704 tcgatcaatctaaggtaagggtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaa 8606  T
Q  152 tttggg-aattaggttttgaagttgtaattggttg 185  Q
    |||||| ||||||| || |||||||||||||||||    
T  8605 tttgggaaattagggttagaagttgtaattggttg 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 18856 - 18744
Alignment:
Q  106 aattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttga-agttgtaattggttgttaatagagtagaaaatcc 204  Q
    ||||||||||||||||||| |||||||| | | | | ||   |||||| |||||||||||||||| | ||| |||| ||||||||| || ||||||||||    
T  18856 aattctgaaattgagtttaacatgttgtggttgggaatttgaggaatt-gggaattaggttttgagaattgcaattagttgttaattgaatagaaaatcc 18758  T
Q  205 gttgaatttgtgta 218  Q
     | |||||||||||    
T  18757 atagaatttgtgta 18744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 75; Significance: 1e-34; HSPs: 4)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 67 - 218
Target Start/End: Complemental strand, 5310 - 5167
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 166  Q
    |||||||||||| ||||||||||||||  || ||||||||||||||||||||||||| ||||||||| | ||||        |||||||||||||| |||    
T  5310 gtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattacgtt 5219  T
Q  167 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 218  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  5218 ttgaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 5167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 67 - 218
Target Start/End: Complemental strand, 11430 - 11287
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 166  Q
    |||||||||||| ||||||||||||||  || ||||||| ||||||||||||||||| ||||||||| | ||||        ||||||||||||||||||    
T  11430 gtaagggtgggattaactttctctaatcttaggttgtatcattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattaggtt 11339  T
Q  167 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 218  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  11338 ttgaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 11287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 67 - 217
Target Start/End: Complemental strand, 19754 - 19605
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 166  Q
    ||||| |||||| ||| ||||||||||  || ||| ||||||||||||||||||||||||||||||| | ||||   | || ||||||| ||||||||||    
T  19754 gtaagtgtgggattaaatttctctaatcttaggttatataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgagaattaggtt 19655  T
Q  167 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgt 217  Q
     |||||||||||||| ||||||||| | |||||||||| ||||||||||||    
T  19654 atgaagttgtaattgattgttaata-aatagaaaatccattgaatttgtgt 19605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 5510 - 5454
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  5510 aatctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaa 5454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 58 - 214
Target Start/End: Original strand, 26629 - 26779
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgg 156  Q
    |||||||| |||||||||||| ||||||||| ||||| || |||||||||||||| ||||||||||||||||||||| | ||||        ||||||||    
T  26629 caatctaaagtaagggtgggattaactttctttaattttaggttgtataattctgaaaattgagtttagcatgttgttgtttgt--------gaatttgg 26720  T
Q  157 gaattaggttttgaagttgtaa-ttggttgttaatagagtagaaaatccgttgaatttg 214  Q
    ||||||||||||||| | |||| |||||||||||||||||||||||||| |||||||||    
T  26721 gaattaggttttgaattagtaatttggttgttaatagagtagaaaatccattgaatttg 26779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 52 - 184
Target Start/End: Original strand, 135493 - 135625
Alignment:
Q  52 gtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatggga 150  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||||||| |||||||||||||| |||| |||| || |||||||||||||||| |||||    
T  135493 gtcgatcaacctaaggtaagggtgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggttgtagttttggga 135591  T
Q  151 atttgggaattaggttttgaagttgtaattggtt 184  Q
    |||||||||||||  || ||||||| ||||||||    
T  135592 atttgggaattagagttagaagttgaaattggtt 135625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 16650 - 16532
Alignment:
Q  69 aagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtttt 168  Q
    |||||||||||||| ||| |||||||||||||||||| ||||||||| ||  |||| ||||| ||||||||||||| ||| ||||||| ||||||||||     
T  16650 aagggtgggactaaatttatctaattctaagttgtatgattctgaaactggatttaacatgtggtaggttgtagttttggaaatttggcaattaggttta 16551  T
Q  169 gaagttgtaattggttgtt 187  Q
    |||||||||||||||||||    
T  16550 gaagttgtaattggttgtt 16532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 231
Target Start/End: Original strand, 1054 - 1226
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggg 157  Q
    |||||||||||||||||||||||||||||||| |||||||||  |||||||||| ||||||| |||| || ||||||||||| |||| || |||||||||    
T  1054 aatctaaggtaagggtgggactaactttctcttattctaagtgttataattctgaaaattgaatttaacaagttgtaggttggagttttgagaatttggg 1153  T
Q  158 aattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgtcca 231  Q
    | ||||| || |||||||||||| |||| |   ||||||| ||||| ||||||||  ||||||| | |||||||    
T  1154 atttagggttagaagttgtaattagttgatttaagagtag-aaatctgttgaattgatgtagaaataatgtcca 1226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 3042 - 3174
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    |||||||||| |||||||||||||||||||| |||  ||||||||||| |||| ||||||||| |||| |||| || |||||||||||||||| ||||||    
T  3042 tcgatcaatccaaggtaagggtgggactaaccttcaataattctaagt-gtattattctgaaaattgaatttaacaagttgtaggttgtagttttgggaa 3140  T
Q  152 tttgggaattaggttttgaagttgtaattggttg 185  Q
    ||| ||||||||| || |||||||||||||||||    
T  3141 tttaggaattagggttagaagttgtaattggttg 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 67181 - 67060
Alignment:
Q  55 gatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatt 153  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||| ||||||  |||| ||  ||||||||||||||| | ||||||    
T  67181 gatcaatctaaggtaaaggtgggactaactttctctaattcgaagtggtataattctgaaaattggatttaacaaattgtaggttgtagttttaggaatt 67082  T
Q  154 tgggaattaggttttgaagttg 175  Q
    ||||||| |||||| |||||||    
T  67081 tgggaataaggtttagaagttg 67060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 18328 - 18275
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  18328 ctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaa 18275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 10846 - 10741
Alignment:
Q  67 gtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggtt 166  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||| | ||||        ||||||||||||||||||    
T  10846 gtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgggaattaggtt 10755  T
Q  167 ttgaagttgtaatt 180  Q
    ||||||||||||||    
T  10754 ttgaagttgtaatt 10741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 20076 - 20202
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    |||||||| |||||||||||| ||||||||| ||| ||||||||||| |||||||||||| ||||||| |||| || |||||||||| ||||| ||||||    
T  20076 tcgatcaacctaaggtaagggcgggactaaccttcactaattctaag-tgtataattctgaaaattgaatttaacaggttgtaggttatagtt-tgggaa 20173  T
Q  152 tttgggaattaggttttgaagttgtaatt 180  Q
    ||||||||||| |||| ||||||||||||    
T  20174 tttgggaattatgtttagaagttgtaatt 20202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 7330 - 7205
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgg-gaa 159  Q
    ||||||| |||||||||||||| |||| ||||||||||||||||||||||| ||||||  |||  ||||||||||||| ||||| |||||||||||  ||    
T  7330 ctaaggtgagggtgggactaacattctttaattctaagttgtataattctgaaaattggatttgacatgttgtaggttatagttttgggaatttggaaaa 7231  T
Q  160 ttaggttttgaagttgtaattggttg 185  Q
    ||||| || |||||||||||||||||    
T  7230 ttagggttagaagttgtaattggttg 7205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 185
Target Start/End: Original strand, 2021 - 2143
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    |||| ||||||||||| |||| ||| |||||||||||| |||| ||| ||||| |||| |||| ||||||||||||||||||| ||| ||||||||||||    
T  2021 taagctaagggtgggattaaccttcactaattctaagt-gtatgattttgaaaattgaatttaacatgttgtaggttgtagttttggaaatttgggaatt 2119  T
Q  162 aggttttgaagttgtaattggttg 185  Q
    ||||||  ||||||||||||||||    
T  2120 aggtttataagttgtaattggttg 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 166
Target Start/End: Complemental strand, 60957 - 60843
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || ||||||||||| || ||||||| |||| |||||||||||||||||||||||| |||||| |||| ||||||||||||||||||| || | |    
T  60957 tcgattaacctaaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgagga 60858  T
Q  152 tttgggaattaggtt 166  Q
    |||| ||||||||||    
T  60857 tttgagaattaggtt 60843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 166
Target Start/End: Original strand, 126295 - 126407
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaat 152  Q
    ||||| || ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  |||| || ||||||| |||||||| || | ||    
T  126295 tcgattaagctaaggtaagg-tgggactaactttctctaattctaagttgtatgattctgaaattggatttaacaagttgtagattgtagttttgaggat 126393  T
Q  153 ttgggaattaggtt 166  Q
    ||| ||||||||||    
T  126394 ttgagaattaggtt 126407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 57; Significance: 6e-24; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 20016 - 19905
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||  |||| || |||||||||||||||| |||| |    
T  20016 tcgattaacctaaggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tgggga 19918  T
Q  152 tttgggaattagg 164  Q
    |||| ||||||||    
T  19917 tttgagaattagg 19905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 14005 - 13949
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||| |||||||||||  |  |||||| ||||||||||    
T  14005 aatctaaggtaagggtgggactagctttctctaataatgggttgtaaaattctgaaa 13949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Complemental strand, 13911 - 13878
Alignment:
Q  152 tttgggaattaggttttgaagttgtaattggttg 185  Q
    |||||||||||||||| |||||||||||||||||    
T  13911 tttgggaattaggtttagaagttgtaattggttg 13878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 17936 - 17992
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17936 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 19263 - 19207
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19263 aatctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaa 19207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 61844 - 61900
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  61844 aatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 61900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 166
Target Start/End: Complemental strand, 96455 - 96347
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 157  Q
    |||||||| |||| ||||||||||||||||||||||||| |||||||| ||||||||| ||  |||| || |||||||||||||||| || | ||| | |    
T  96455 caatctaaagtaaaggtgggactaactttctctaattctgagttgtatgattctgaaaatggatttaacaagttgtaggttgtagttttgaggattggag 96356  T
Q  158 aattaggtt 166  Q
    |||||||||    
T  96355 aattaggtt 96347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 1846 - 1917
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgt 133  Q
    |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||    
T  1846 ctaaggtgtgggtgggactaactttctctaattctaagtggtataattctgaaattgaatttaacatgttgt 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 56 - 190
Target Start/End: Original strand, 158815 - 158949
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaattt 154  Q
    |||||||||||||||||||||||||||| |||  ||||||| |||  ||| ||||| ||| |||  |||| || |||||||||||||||| |||||||||    
T  158815 atcaatctaaggtaagggtgggactaaccttcaataattctgagta-tatgattctaaaaattggatttaacaagttgtaggttgtagttttgggaattt 158913  T
Q  155 gggaattaggttttgaagttgtaattggttgttaat 190  Q
    |||||||||| || ||||||| || |||||| ||||    
T  158914 gggaattagggttagaagttgcaaatggttgataat 158949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 18696 - 18749
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattct 111  Q
    ||||||||||| ||||||||| ||||||||||||||  | ||||||||||||||    
T  18696 caatctaaggtgagggtgggattaactttctctaataatgagttgtataattct 18749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 16412 - 16471
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||| || ||||||| ||||||  |  |||||||||||||||||    
T  16412 atcaatctaaggtaagggtgagattaactttatctaataatgggttgtataattctgaaa 16471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 166
Target Start/End: Complemental strand, 5002 - 4888
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || |||||||||||||||||||||| |||| |||||||||||||||||||||||| | |||  |||| ||||||||||| ||||||| || | |    
T  5002 tcgattaacctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagagttggatttaacatgttgtaggatgtagttttgagga 4903  T
Q  152 tttgggaattaggtt 166  Q
    |||  ||||||||||    
T  4902 tttaagaattaggtt 4888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 166
Target Start/End: Complemental strand, 4447 - 4333
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || ||||||||| | |||||||||| |||| |||||||||||||||||||||||| || ||  |||| ||||||||||||||||||| || | |    
T  4447 tcgattaacctaaggtaacgatgggactaaccttctttaattctaagttgtataattctgagaactggatttaacatgttgtaggttgtagttttgagga 4348  T
Q  152 tttgggaattaggtt 166  Q
    |||| ||||||||||    
T  4347 tttgagaattaggtt 4333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 166
Target Start/End: Complemental strand, 398624 - 398510
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || |||||||||||||||||||||| |||| |||||||| ||||||||||||||| |||||  |||| ||||||||||| ||||||| || | |    
T  398624 tcgattaacctaaggtaagggtgggactaaccttctttaattctaggttgtataattctgagaattggatttaacatgttgtaggatgtagttttgagga 398525  T
Q  152 tttgggaattaggtt 166  Q
    |||  ||||||||||    
T  398524 tttaagaattaggtt 398510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 2199 - 2252
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2199 ctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaa 2252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 15325 - 15272
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15325 ctaaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 5712 - 5761
Alignment:
Q  68 taagggtgggactaactttctctaattctaagttgtataattctgaaatt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5712 taagggtgggactaactttctctaattctaagttgtataattctgaaatt 5761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 61 - 171
Target Start/End: Complemental strand, 5420 - 5311
Alignment:
Q  61 tctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaa 159  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||| |||||| ||||||| |||| |||| ||||| |||||||| || ||||| |||||    
T  5420 tctaaggtaagggtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacatg-tgtagattgtagttttgtgaattcgggaa 5323  T
Q  160 ttaggttttgaa 171  Q
    ||||| ||||||    
T  5322 ttagggtttgaa 5311  T

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Target: scaffold0261 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 6620 - 6686
Alignment:
Q  150 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 216  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||| ||||  ||||||||||    
T  6620 aatttgggaattaggttttgatgtcgtaattggttgttaatagagtagaagatccaatgaatttgtg 6686  T

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Target: scaffold0042 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 162
Target Start/End: Complemental strand, 29450 - 29340
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || |||||||||||||||||||||  |||| |||||||||||||||| |||||| ||| ||  |||| || |||||||||||||||| |||| |    
T  29450 tcgattaacctaaggtaagggtgggactaatcttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttgggga 29351  T
Q  152 tttgggaatta 162  Q
    |||| ||||||    
T  29350 tttgagaatta 29340  T

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Target: scaffold1186 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 115
Target Start/End: Complemental strand, 2089 - 2020
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  2089 tccttcgtcgatcaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 2020  T

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Target: scaffold0577 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 171
Target Start/End: Complemental strand, 9112 - 9004
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    |||||||||||||||||||||| |||  ||||||| |||  | ||||||||||| ||  |||| || |||||||||||||||| | ||||||||||||||    
T  9112 ctaaggtaagggtgggactaaccttcagtaattctgagta-tgtaattctgaaactggatttaacaggttgtaggttgtagtttttggaatttgggaatt 9014  T
Q  162 aggttttgaa 171  Q
    ||| ||||||    
T  9013 agggtttgaa 9004  T

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Target: scaffold0516 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 5304 - 5353
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattct 111  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5304 ctaaggtaagggtgggactaactttctctaattttaagttgtataattct 5353  T

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Target: scaffold0205 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 30723 - 30607
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||| |||||||||||| ||||||| |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||||| |||||    
T  30723 tccttcgtcgatcaatccaaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagtt 30625  T
Q  145 atgggaatttgggaatta 162  Q
     || |||||||| |||||    
T  30624 ttgagaatttggaaatta 30607  T

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Target: scaffold0065 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 52543 - 52648
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaat 160  Q
    ||||| |||||||||||||||| |||  |||||||||||||| ||||||||| |||||  |||| ||||||||||| ||||||| || | ||||| ||||    
T  52543 ctaagataagggtgggactaaccttcattaattctaagttgtgtaattctgagaattggatttaacatgttgtaggatgtagttttgaggatttgagaat 52642  T
Q  161 taggtt 166  Q
    ||||||    
T  52643 taggtt 52648  T

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Target: scaffold0005 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 115
Target Start/End: Original strand, 186179 - 186248
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  186179 tccttcgtcgatcaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 186248  T

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Target: scaffold0439 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 107 - 186
Target Start/End: Complemental strand, 12403 - 12323
Alignment:
Q  107 attctgaaattgagtttagcatg-ttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgt 186  Q
    ||||||||||||| |||| |||| ||||||||||||||| ||| |||||| ||||||||||| ||||||||||| ||||||    
T  12403 attctgaaattgaatttaacatggttgtaggttgtagttttggaaatttgagaattaggtttagaagttgtaataggttgt 12323  T

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Target: scaffold0859 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 185
Target Start/End: Complemental strand, 4718 - 4612
Alignment:
Q  78 actaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgta 177  Q
    |||||| ||| ||||| |||||| |||| ||||| ||||||| |||| || ||| |||||||| ||| |||||||||| ||||||||||| |||||||||    
T  4718 actaaccttcactaatcctaagt-gtatgattctaaaattgaatttaacaggttttaggttgtggttttgggaatttgagaattaggtttagaagttgta 4620  T
Q  178 attggttg 185  Q
    ||| ||||    
T  4619 attagttg 4612  T

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Target: scaffold0411 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 151
Target Start/End: Original strand, 13407 - 13505
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||||||||||||||||||||||||||||| |||  ||||||||||  || |||||||| ||| ||| |||| || |||||||||||||||| ||||||    
T  13407 tcgatcaatctaaggtaagggtgggactaaccttcaataattctaag-ggtttaattctgaaaactgaatttaacaagttgtaggttgtagttttgggaa 13505  T

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Target: scaffold0017 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 26786 - 26727
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||| ||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  26786 atcaatctacggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 26727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 178
Target Start/End: Complemental strand, 31170 - 31046
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaa 151  Q
    ||||| || |||||||||||||||||||||| |||  ||||||| || | | |||||||| ||||||  |||| || |||||||||||||||| ||||||    
T  31170 tcgattaacctaaggtaagggtgggactaaccttcaataattctgag-tatgtaattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaa 31073  T
Q  152 tttgggaattaggttttgaagttgtaa 178  Q
    ||||||||||||| ||  |||||||||    
T  31072 tttgggaattagggttaaaagttgtaa 31046  T

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Target: scaffold0116 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 35457 - 35586
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaattt 154  Q
    ||||||||||||||||| |||||||||| ||   ||||||| |||  ||| ||||||||| |||| |||| ||  ||||||||||||||| |||||||||    
T  35457 atcaatctaaggtaaggatgggactaacctttattaattctgagta-tatgattctgaaaattgaatttaacaacttgtaggttgtagttttgggaattt 35555  T
Q  155 gggaattaggttttgaagttgtaattggttg 185  Q
    |||||||| | || ||||||| || ||||||    
T  35556 gggaattaaggttagaagttgcaaatggttg 35586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 115
Target Start/End: Complemental strand, 2316 - 2247
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||| |||||||||||||||||||||||| |||||| ||||  |  |||||||||||||||||    
T  2316 tccttcgtcgaccaatctaaggtaagggtgggactagctttctataataatgggttgtataattctgaaa 2247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 5082 - 5029
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  5082 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 5029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 9013 - 8960
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  9013 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 8960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 5082 - 5029
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  5082 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 5029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 166
Target Start/End: Complemental strand, 7624 - 7504
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||| |||||||||||||||||| | |||  |||||||||||  | |||||||| ||| ||  |||| ||||||||| ||| |||||    
T  7624 tccttcgtcgatcaatccaaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaaatgtatttaacatgttgtaagtt-tagtt 7526  T
Q  145 atgggaatttgggaattaggtt 166  Q
     || | ||||||||||||||||    
T  7525 ttgaggatttgggaattaggtt 7504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 21150 - 21097
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  21150 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 21097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 34165 - 34112
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  34165 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 34112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 69852 - 69905
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  69852 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 69905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 164
Target Start/End: Complemental strand, 121021 - 120905
Alignment:
Q  48 cttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttat 146  Q
    ||||||||||||||| |||||||||||||||||| | |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||||| ||||| |    
T  121021 cttcgtcgatcaatccaaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagtttt 120923  T
Q  147 gggaatttgggaattagg 164  Q
    | | ||||| ||||||||    
T  120922 gaggatttgtgaattagg 120905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 29215 - 29268
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||| ||||||||||||||||||||||||||||  | |||||||||||    
T  29215 ctaaggtaagagtgggactaactttctctaattctaagtattttaattctgaaa 29268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 9132 - 9085
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaat 93  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||    
T  9132 tccttcgtcgatcaatctaaggtaagggtgggactaaccttctttaat 9085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 185
Target Start/End: Original strand, 28329 - 28451
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    ||||||||||||||||||| | |||  ||||||| |||  ||| ||||||||| |||  |||| || |||||||||||||||| ||||||||||| ||||    
T  28329 taaggtaagggtgggactacccttcaataattctgagta-tatgattctgaaaattggatttaacaagttgtaggttgtagttttgggaatttggaaatt 28427  T
Q  162 aggttttgaagttgtaattggttg 185  Q
    ||| || ||||||| || ||||||    
T  28428 agggttagaagttgcaaatggttg 28451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 40176 - 40129
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaat 93  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||    
T  40176 tccttcgtcgatcaatctaaggtaaggatgcgactaactttctctaat 40129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 163
Target Start/End: Complemental strand, 22166 - 22050
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||| ||||||| |||||||||| | |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||||| |||||    
T  22166 tccttcgtcgatcaatccaaggtaa-ggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagtt 22069  T
Q  145 atgggaatttgggaattag 163  Q
     || | |||||||||||||    
T  22068 ttgaggatttgggaattag 22050  T

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Target: scaffold0601 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 196 - 233
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagt 100  Q
    ||||||||||||||||||||||||||||||||||||||    
T  196 taaggtaagggtgggactaactttctctaattctaagt 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 21764 - 21671
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggtt 138  Q
    ||||||||||||||||| |||||||||||||||||| | |||  |||||||||||  | ||||| || ||||||  |||| |||||||||||||    
T  21764 tccttcgtcgatcaatccaaggtaagggtgggactagccttcaataattctaagtgttttaattttgaaaattgtatttaacatgttgtaggtt 21671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 2937 - 2881
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  2937 aatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 2881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 5851 - 5913
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||| || ||||||||| ||||  |||||||||||||||||||||||  |||||||||||||    
T  5851 tcgattaacctaaggtaaaggtgatactaactttctctaattctaagtgttataattctgaaa 5913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 13499 - 13370
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaattt 154  Q
    ||||||||||||||||| || ||||||| ||   | ||||| |||  ||| ||||||||| |||| |||| || ||||||||||| |||| |||||||||    
T  13499 atcaatctaaggtaaggatgtgactaacctttaatcattctcagta-tatgattctgaaaattgaatttaacaagttgtaggttgaagttttgggaattt 13401  T
Q  155 gggaattaggttttgaagttgtaattggttg 185  Q
    |||||||||| ||  |||||| || ||||||    
T  13400 gggaattagggttaaaagttgcaaatggttg 13370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 6421 - 6383
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagt 100  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  6421 ctaatgtaagggtgggactaactttctctaattctaagt 6383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 21776 - 21814
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagt 100  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  21776 ctaaggtaaggatgggactaactttctctaattctaagt 21814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 68719 - 68756
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaat 93  Q
    |||||||||||||||||||||||||| |||||||||||    
T  68719 atcaatctaaggtaagggtgggactacctttctctaat 68756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 3418 - 3474
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||||||| |||||||||||  |  ||||||| |||||||||    
T  3418 aatctaaggtaagggtgggactagctttctctaataatgcgttgtatgattctgaaa 3474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 2454 - 2506
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  2454 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 2506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 5685 - 5633
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  5685 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 5633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 14582 - 14638
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  14582 aatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 14638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 23640 - 23696
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  23640 aatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 23696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 12605 - 12723
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||| || |||||||| | |||| | |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||||| |||||    
T  12605 tccttcgtcgatcaatccaaagtaagggtagaactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagtt 12703  T
Q  145 atgggaatttgggaattagg 164  Q
     || | ||||||| ||||||    
T  12704 ttgaggatttggggattagg 12723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 93
Target Start/End: Original strand, 40156 - 40191
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaat 93  Q
    |||||||||||||||||||||||||| |||||||||    
T  40156 caatctaaggtaagggtgggactaaccttctctaat 40191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 6477 - 6418
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||  ||||| |||||||||||  | |||||| |||||||||||    
T  6477 atcaatctaaggtaagggtaagactagctttctctaataatgagttgtgtaattctgaaa 6418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 164
Target Start/End: Complemental strand, 126860 - 126742
Alignment:
Q  46 tccttcgtcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagtt 144  Q
    ||||||||||||||||| | |||||||||||||||| | ||   |||||||||||  | |||||||| ||||||  |||| ||||||| ||||| |||||    
T  126860 tccttcgtcgatcaatccatggtaagggtgggactagccttaaataattctaagtgttttaattctgaaaattgtatttaacatgttgcaggtt-tagtt 126762  T
Q  145 atgggaatttgggaattagg 164  Q
     || | | ||||||||||||    
T  126761 ttgaggacttgggaattagg 126742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 33513 - 33476
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaat 93  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  33513 atcaatctaaggtaagggtgggactaaccttctttaat 33476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 510 - 448
Alignment:
Q  103 tataattctgaaattgagtttagcatgttgtaggttgtagttatg-ggaatttgggaattagg 164  Q
    ||||||||||||||||  |||| ||||||||||||| ||||| || ||| |||||||||||||    
T  510 tataattctgaaattggatttaacatgttgtaggttatagttttgaggattttgggaattagg 448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 18636 - 18670
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaat 93  Q
    ||||||||||||||||||||||| |||||||||||    
T  18636 aatctaaggtaagggtgggactagctttctctaat 18670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 18731 - 18764
Alignment:
Q  152 tttgggaattaggttttgaagttgtaattggttg 185  Q
    |||||||||||||||| |||||||||||||||||    
T  18731 tttgggaattaggtttagaagttgtaattggttg 18764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 17511 - 17573
Alignment:
Q  53 tcgatcaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||| |||||| |||| ||||||  |   ||||||||||||||||    
T  17511 tcgatcaatctaaggtaagggtcggactagctttttctaataatggattgtataattctgaaa 17573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 164
Target Start/End: Complemental strand, 28029 - 27928
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 161  Q
    ||||||||||||||||||| | |||  |||||||||||  | |||||||| ||||||  |||| ||||||||||||| ||||| || | |||||| ||||    
T  28029 taaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgaggatttggaaatt 27931  T
Q  162 agg 164  Q
    |||    
T  27930 agg 27928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 138
Target Start/End: Complemental strand, 42887 - 42811
Alignment:
Q  63 taaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttagcatgttgtaggtt 138  Q
    ||||||||||||||||||| | |||  |||||||||||  | |||||||| ||||||  |||| |||||||||||||    
T  42887 taaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt 42811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 127339 - 127373
Alignment:
Q  59 aatctaaggtaagggtgggactaactttctctaat 93  Q
    ||||||||||||||||||||||| |||||||||||    
T  127339 aatctaaggtaagggtgggactagctttctctaat 127373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 666 - 629
Alignment:
Q  56 atcaatctaaggtaagggtgggactaactttctctaat 93  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  666 atcaatctaaggtaagggtgggactaaccttctttaat 629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 1354 - 1410
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||||||||||||||| |||| ||| | | |||| |||||||||||||    
T  1354 caatctaaggtaagggtgggactaaccttctttaa-tatgagttctataattctgaaa 1410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 11276 - 11223
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    |||||||||||||| | ||||||||||||||||| ||||  | |||||||||||    
T  11276 ctaaggtaagggtgagtctaactttctctaattccaagtattttaattctgaaa 11223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 15010 - 14957
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||| |||||||||||||  || | ||||||||||||||| ||||||||||    
T  15010 ctaaggtgagggtgggactaaacttatataattctaagttgtagaattctgaaa 14957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 17030 - 16977
Alignment:
Q  62 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 115  Q
    ||||||| |||||||||||||  || | ||||||||||||||| ||||||||||    
T  17030 ctaaggtgagggtgggactaaacttatataattctaagttgtagaattctgaaa 16977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 7509 - 7545
Alignment:
Q  58 caatctaaggtaagggtgggactaactttctctaatt 94  Q
    |||||||||||||||||||||||||| |||| |||||    
T  7509 caatctaaggtaagggtgggactaaccttctttaatt 7545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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