View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9410_low_49 (Length: 239)
Name: NF9410_low_49
Description: NF9410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9410_low_49 |
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Alignment Details
Target: chr7 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 22045767 - 22045937
Alignment:
| Q |
1 |
caaatgtgtgagagacgtgtttacgaaaacgacgtggacgtggtgttagatccgcaaatagattaaaatcaccgtaagatcatgacacgtgtccttagat |
100 |
Q |
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| T |
22045767 |
caaatgtgtgagagacgtgtttacgaaaacgacgtggacgtggtgttagatccgcaaatagattaaaatcaccgtaagatcatgacacgtgtccttagat |
22045866 |
T |
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| Q |
101 |
atttcacactccctctcctcattttacctataaatgcgggttcaacccatgcttctatcattcagaagtaa |
171 |
Q |
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||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22045867 |
atttcacactctctctcctcatttttcctataaatgcgggttcaacccatgcttctatcattcagaagtaa |
22045937 |
T |
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