View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9410_low_57 (Length: 207)
Name: NF9410_low_57
Description: NF9410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9410_low_57 |
 | |
|
| [»] scaffold0284 (1 HSPs) |
| | |
|
| [»] scaffold0114 (1 HSPs) |
| | |
|
| [»] scaffold0211 (1 HSPs) |
| | |
|
| [»] scaffold0191 (1 HSPs) |
| | |
|
| [»] scaffold0216 (1 HSPs) |
| | |
|
| [»] scaffold0074 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0284 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0284
Description:
Target: scaffold0284; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 2422 - 2254
Alignment:
| Q |
21 |
attgatggactattttagcctcacatgtagccaatgtctagatctgtctctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgatata |
120 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2422 |
attgatggactattttagcctcacatgtatccaatgtctagatctgtccctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgatata |
2323 |
T |
|
| Q |
121 |
cctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttagtataatgtgatg |
189 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
2322 |
cctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttaacataatgtgatg |
2254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 146; Significance: 4e-77; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 50239963 - 50240138
Alignment:
| Q |
14 |
cagagacattgatggactattttagcctcacatgtagccaatgtctagatctgtctctggatgcaaaagtaaatgttaa---gaaacatataagtgagat |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||| |
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|
| T |
50239963 |
cagagacattgatggactattttagcctcacatgtagccaatgtctagatctgtccctcgatgcaaaagtaaatgttaattagaaacatataagtgagat |
50240062 |
T |
|
| Q |
111 |
gatcgatatacctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttagtataatgtg |
186 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
50240063 |
gatcgatatacctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttaacataatgtg |
50240138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 14249290 - 14249223
Alignment:
| Q |
94 |
aaacatataagtgagatgatcgatatacctaatacactaagattttggatgatgatgtgctgtcaatt |
161 |
Q |
| |
|
||||||||||||||||||| | |||||| |||||| |||| |||||| |||||||||| | |||||| |
|
|
| T |
14249290 |
aaacatataagtgagatgaccaatatacataatactttaaggttttgggtgatgatgtggtatcaatt |
14249223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 6437626 - 6437692
Alignment:
| Q |
94 |
aaacatataagtgagatgatcgatatacctaatacactaagattttggatgatgatgtgctgtcaat |
160 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| | |||| ||||| |||||||||| ||||||| |
|
|
| T |
6437626 |
aaacatataagtgagatgatcaatatacataatgctttaaggttttgagtgatgatgtggtgtcaat |
6437692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 31967423 - 31967255
Alignment:
| Q |
21 |
attgatggactattttagcctcacatgtagccaatgtctagatctgtctctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgatata |
120 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31967423 |
attgatggactactttagcctcacatgtatccaatgtctagatttgtccctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgatata |
31967324 |
T |
|
| Q |
121 |
cctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttagtataatgtgatg |
189 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
31967323 |
cctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttaacataatgtgatg |
31967255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 73 - 112
Target Start/End: Complemental strand, 36727670 - 36727631
Alignment:
| Q |
73 |
gatgcaaaagtaaatgttaagaaacatataagtgagatga |
112 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
36727670 |
gatgcaaaagtagatgttaagaaacatatatgtgagatga |
36727631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 36720129 - 36720169
Alignment:
| Q |
86 |
atgttaagaaacatataagtgagatgatcgatatacctaat |
126 |
Q |
| |
|
||||| || |||||||||||||||||||| ||||||||||| |
|
|
| T |
36720129 |
atgttgagcaacatataagtgagatgatccatatacctaat |
36720169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 160
Target Start/End: Complemental strand, 45054109 - 45054025
Alignment:
| Q |
76 |
gcaaaagtaaatgttaagaaacatataagtgagatgatcgatatacctaatacactaagattttggatgatgatgtgctgtcaat |
160 |
Q |
| |
|
|||||||||||| || || |||||||||||||||| || |||||||| || |||||||||| |||| |||||| ||||||| |
|
|
| T |
45054109 |
gcaaaagtaaatattgagcaacatataagtgagatattcaatatacctgatgtcttaagattttgaatgaagatgtggtgtcaat |
45054025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 144; Significance: 6e-76; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 6552636 - 6552819
Alignment:
| Q |
19 |
acattgatggactattttagcctcacatgtagccaatgtctagatctgtctctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgata |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
6552636 |
acattgatggactattttagcctcacatgtatccaatgtctagatctgtccctggatgcaaaagtaaatgttaaaaaacgtataagtgagatgatcgata |
6552735 |
T |
|
| Q |
119 |
tacctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttagtataatgtgatg-tccatctcattg |
201 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||| ||||||| |
|
|
| T |
6552736 |
tacctaatacactaagattttggatgatgatgtgttgtcaattgtatgattaaccttaacataatgtgatgatccaactcattg |
6552819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 6553036 - 6553219
Alignment:
| Q |
19 |
acattgatggactattttagcctcacatgtagccaatgtctagatctgtctctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgata |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6553036 |
acattgatggactattttagcctcacatgtatccaatgtctagatctgtccctagatgcaaaagtaaatgttaagaaacatataagtgagatgatcgata |
6553135 |
T |
|
| Q |
119 |
tacctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttagtataatgtgatg-tccatctcattg |
201 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||| ||||||| |
|
|
| T |
6553136 |
tacctaatagactaagattttggatgatggtgtgctgtcaattgtatgattaaccttaacataatgtgatgatccaactcattg |
6553219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 312810 - 313003
Alignment:
| Q |
19 |
acattgatggactattttagcctcacatgtagccaatgtctagatctgtctc----------tggatgcaaaagtaaatgttaagaaacatataagtgag |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312810 |
acattgatggactattttagcctcacatgtatccaatgtctcgatctgtctcgatctgtctgtggatgcaaaagtaaatgttaagaaacatataagtgag |
312909 |
T |
|
| Q |
109 |
atgatcgatatacctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttagtataatgtgatg-tccatctcattg |
201 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| |
|
|
| T |
312910 |
atgatcgatatacctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttaacataatgtgatgatccaactcattg |
313003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 160
Target Start/End: Complemental strand, 24181793 - 24181727
Alignment:
| Q |
94 |
aaacatataagtgagatgatcgatatacctaatacactaagattttggatgatgatgtgctgtcaat |
160 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| | |||| |||||| ||||||| || ||||||| |
|
|
| T |
24181793 |
aaacatataagtgagatgatcaatatacataatgctttaaggttttgggtgatgatatggtgtcaat |
24181727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 6561023 - 6561075
Alignment:
| Q |
71 |
tggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgatatacct |
123 |
Q |
| |
|
||||| |||||||| ||||||| |||||||||||||||||| | |||||||| |
|
|
| T |
6561023 |
tggatacaaaagtagatgttaaacaacatataagtgagatgaccaatatacct |
6561075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 176
Target Start/End: Complemental strand, 41528597 - 41528440
Alignment:
| Q |
19 |
acattgatggactattttagcctcacatgtagccaatgtctagatctgtctctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgata |
118 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41528597 |
acattgatgtactattttagcctcacatgtatccaatgtctagatatgtccctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgata |
41528498 |
T |
|
| Q |
119 |
tacctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaacctta |
176 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41528497 |
tacctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaacctta |
41528440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 36754624 - 36754454
Alignment:
| Q |
19 |
acattgatggactattttagcctcacatgtagccaatgtctagatctgtctctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgata |
118 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36754624 |
acattgatggactatcttagcctcacatgtatccaatgtctagatctatccctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgata |
36754525 |
T |
|
| Q |
119 |
tacctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttagtataatgtgatg |
189 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
36754524 |
tacctaatacactaagattttggatgatgatctgctgtcaatagtatgattaaccttaacataatgtgatg |
36754454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 43216975 - 43216917
Alignment:
| Q |
94 |
aaacatataagtgagatgatcgatatacctaatacactaagattttggatgatgatgtg |
152 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| | ||||||||||| |||||||||| |
|
|
| T |
43216975 |
aaacatataagtgagatgatcaatatacataatgctttaagattttgggtgatgatgtg |
43216917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0114 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0114
Description:
Target: scaffold0114; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 35140 - 35323
Alignment:
| Q |
19 |
acattgatggactattttagcctcacatgtagccaatgtctagatctgtctctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgata |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
35140 |
acattgatggactattttagcctcacatgtatccaatgtctagatttgtccctggatgcaaaagtaaatgttaagaaacatataagttagatgatcgata |
35239 |
T |
|
| Q |
119 |
tacctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttagtataatgtgatg-tccatctcattg |
201 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| |||| ||||||| |
|
|
| T |
35240 |
tacctaatacactaagattttggatgatgttgtgctgtcaattgtatgattaaccttaacataaagtgatgatccaactcattg |
35323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 136; Significance: 4e-71; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 45919807 - 45919624
Alignment:
| Q |
19 |
acattgatggactattttagcctcacatgtagccaatgtctagatctgtctctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgata |
118 |
Q |
| |
|
|||||| ||||||||||||| |||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
45919807 |
acattggtggactattttagtctcacatgtatccaatgtctagatccgtccctggatgcaaaagtaaatgttaagaaatatataagtgagatgatcgata |
45919708 |
T |
|
| Q |
119 |
tacctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttagtataatgtgatg-tccatctcattg |
201 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||| ||||||| |
|
|
| T |
45919707 |
tacctaatacactaagattttggatgatgatgtgttgtcaattgtatgattaaccttaacataatgtgatgatccaactcattg |
45919624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 49880278 - 49880463
Alignment:
| Q |
19 |
acattgatggactattttagcctcacatgtagccaatgtctagatctgtctctggatgcaaaagtaaatgttaagaaacatataagtgagatgat--cga |
116 |
Q |
| |
|
|||||| ||||||||||||| ||| |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
49880278 |
acattggtggactattttagtctcgcatgtatccaatgtctagatccgtccctggatgcaaaagtaaatgttaagaaacatataagtgagatgataaaga |
49880377 |
T |
|
| Q |
117 |
tatacctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttagtataatgtgatg-tccatctcattg |
201 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||| |||| ||||||| |
|
|
| T |
49880378 |
tatacctaatacactaagattttgattgatgatgtgttgtcaattgtatgattaaccttaacataatgtgatgatccaactcattg |
49880463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 16853665 - 16853745
Alignment:
| Q |
80 |
aagtaaatgttaagaaacatataagtgagatgatcgatatacctaatacactaagattttggatgatgatgtgctgtcaat |
160 |
Q |
| |
|
|||||||| || | ||||||||||||||||||||| |||||| |||| | |||| |||||| |||||||||| ||||||| |
|
|
| T |
16853665 |
aagtaaatcttgaaaaacatataagtgagatgatcaatatacataatgctttaaggttttgggtgatgatgtggtgtcaat |
16853745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 31088829 - 31088746
Alignment:
| Q |
71 |
tggatgcaaaagtaaatgttaagaaacatata--agtgagatgatcgatatacctaatacactaagattttggatgatgatgtg |
152 |
Q |
| |
|
||||||||| |||| |||| ||||||||||| |||||||||||| ||||||||||| | ||| ||||||||||||| |||| |
|
|
| T |
31088829 |
tggatgcaagagtaggtgttgagaaacatatataagtgagatgatcaatatacctaatgccttaatattttggatgatggtgtg |
31088746 |
T |
|
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Target: chr5 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 9023467 - 9023635
Alignment:
| Q |
19 |
acattgatggactattttagcctcacatgtagccaatgtctagatctgtctctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgata |
118 |
Q |
| |
|
|||||||| |||||| ||||||||||||||| |||||||||| || |||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
9023467 |
acattgatagactatcttagcctcacatgtatccaatgtctatatttgtccctggatgcaaaagtaaatgttaagaaacatacaagtgagatgatcgata |
9023566 |
T |
|
| Q |
119 |
tacctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttagtataatgtga |
187 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
9023567 |
tacctaatacactaagattttggatgatgatgtgttgtcaattgtatgattaaccttaacataatgtga |
9023635 |
T |
|
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Target: scaffold0211 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: scaffold0211
Description:
Target: scaffold0211; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 20041 - 19858
Alignment:
| Q |
19 |
acattgatggactattttagcctcacatgtagccaatgtctagatctgtctctggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgata |
118 |
Q |
| |
|
||||||||||||||| ||| ||||||||||| ||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20041 |
acattgatggactatcttaacctcacatgtatccaatgtctagatttgtccctgaatgcaaaagtaaatgttaagaaacatataagtgagatgatcgata |
19942 |
T |
|
| Q |
119 |
tacctaatacactaagattttggatgatgatgtgctgtcaattgtatgattaaccttagtataatgtgatg-tccatctcattg |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| || ||||||||||| |||| ||||||| |
|
|
| T |
19941 |
tacctaatacactaagattttggatgatgatgtgctgccaattgtattattaaccataacataatgtgatgatccaactcattg |
19858 |
T |
|
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Target: scaffold0191 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0191
Description:
Target: scaffold0191; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 11645 - 11711
Alignment:
| Q |
94 |
aaacatataagtgagatgatcgatatacctaatacactaagattttggatgatgatgtgctgtcaat |
160 |
Q |
| |
|
||||||||||||||||||||| |||||| |||||| |||| |||||| |||||||||| ||||||| |
|
|
| T |
11645 |
aaacatataagtgagatgatcaatatacataatactttaaggttttgggtgatgatgtggtgtcaat |
11711 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0216 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0216
Description:
Target: scaffold0216; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 29209 - 29157
Alignment:
| Q |
71 |
tggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgatatacct |
123 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
29209 |
tggatgcaaaagtagatgttaaacaacatataagtgagatgatcaatatacct |
29157 |
T |
|
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Target: scaffold0074 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 32751 - 32837
Alignment:
| Q |
73 |
gatgcaaaagtaaatgttaagaaacatataagtgagatgatcgatatacctaatacactaagattttggatgatgatgtgctgtcaat |
160 |
Q |
| |
|
||||||| || | ||||||||||||||||||||||||||| ||||||||| || | ||| ||||| |||||||||||| ||||||| |
|
|
| T |
32751 |
gatgcaagagcatatgttaagaaacatataagtgagatgactgatatacctgatgcgttaaaatttt-gatgatgatgtggtgtcaat |
32837 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 32; Significance: 0.000000004; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 6525069 - 6525116
Alignment:
| Q |
19 |
acattgatggactattttagcctcacatgtagccaatgtctagatctg |
66 |
Q |
| |
|
|||||||||||||||||||| | |||||||| | |||||||||||||| |
|
|
| T |
6525069 |
acattgatggactattttagtcccacatgtatcaaatgtctagatctg |
6525116 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 18090021 - 18089942
Alignment:
| Q |
81 |
agtaaatgttaagaaacatataagtgagatgatcgatatacctaatacactaagattttggatgatgatgtgctgtcaat |
160 |
Q |
| |
|
|||| ||||| |||||||||||| |||||||| | ||||||||||| | |||| |||||| ||| |||||| ||||||| |
|
|
| T |
18090021 |
agtagatgttcagaaacatataattgagatgaacaatatacctaatgccttaaggttttgggtgaagatgtggtgtcaat |
18089942 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 26595978 - 26595897
Alignment:
| Q |
79 |
aaagtaaatgttaagaaacatataagtgagatgatcgatatacctaatacactaagattttggatgatgatgtgctgtcaat |
160 |
Q |
| |
|
|||||| ||||| |||||||||||||| |||||| | || ||||||| |||| ||||||||||||||||| ||||||| |
|
|
| T |
26595978 |
aaagtagatgtttagaaacatataagtaagatgaccaatgcacctaatgtcttaaggttttggatgatgatgtgatgtcaat |
26595897 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 31737254 - 31737166
Alignment:
| Q |
71 |
tggatgcaaaagtaaatgttaagaaacatataagtgagatgatcgatatacctaatacactaagattttggatgatgatgtgctgtcaa |
159 |
Q |
| |
|
||||||||| |||| ||||| | |||||| |||||| ||||| |||||||||||||| |||||||| | ||| |||||| |||||| |
|
|
| T |
31737254 |
tggatgcaagagtagatgttgaacaacatacaagtgatatgattcatatacctaatacattaagatttagtgtgaagatgtggtgtcaa |
31737166 |
T |
|
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Target: chr7 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 2929478 - 2929532
Alignment:
| Q |
73 |
gatgcaaaagtaaatgttaagaaacatataagtgagatgatcgatatacctaata |
127 |
Q |
| |
|
|||| ||||||| ||||||||||||||||| ||||||||| | | |||||||||| |
|
|
| T |
2929478 |
gatgtaaaagtagatgttaagaaacatatatgtgagatgaccaagatacctaata |
2929532 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 6190585 - 6190651
Alignment:
| Q |
94 |
aaacatataagtgagatgatcgatatacctaatacactaagattttggatgatgatgtgctgtcaat |
160 |
Q |
| |
|
||||||||||||| ||| ||| |||||| |||| | ||||||||||| |||||||||| ||||||| |
|
|
| T |
6190585 |
aaacatataagtgggattatcaatatacataatgctttaagattttgggtgatgatgtggtgtcaat |
6190651 |
T |
|
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