View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9411_low_19 (Length: 306)

Name: NF9411_low_19
Description: NF9411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9411_low_19
NF9411_low_19
[»] chr7 (22 HSPs)
chr7 (14-207)||(10552053-10552246)
chr7 (207-306)||(10494156-10494255)
chr7 (207-303)||(13333238-13333334)
chr7 (214-306)||(8667706-8667798)
chr7 (206-306)||(8671411-8671511)
chr7 (206-305)||(7877514-7877613)
chr7 (206-305)||(8602262-8602361)
chr7 (230-305)||(17268227-17268302)
chr7 (217-303)||(8647167-8647253)
chr7 (208-302)||(8654741-8654835)
chr7 (220-305)||(6789800-6789885)
chr7 (220-305)||(8585501-8585586)
chr7 (207-306)||(1301751-1301850)
chr7 (207-306)||(8659650-8659749)
chr7 (230-305)||(17260529-17260604)
chr7 (217-303)||(8640339-8640425)
chr7 (214-303)||(3147562-3147651)
chr7 (220-305)||(8628820-8628905)
chr7 (226-305)||(8382677-8382756)
chr7 (214-305)||(8636132-8636223)
chr7 (235-305)||(27830685-27830755)
chr7 (206-297)||(8590934-8591025)
[»] chr1 (4 HSPs)
chr1 (14-207)||(24582362-24582557)
chr1 (217-306)||(4678350-4678439)
chr1 (220-305)||(15595329-15595414)
chr1 (208-305)||(34466576-34466673)
[»] chr4 (5 HSPs)
chr4 (214-306)||(9335680-9335772)
chr4 (217-296)||(35132745-35132824)
chr4 (217-263)||(23587525-23587571)
chr4 (211-305)||(30775540-30775634)
chr4 (211-291)||(54396725-54396805)
[»] chr2 (6 HSPs)
chr2 (214-306)||(16657306-16657398)
chr2 (211-305)||(12234977-12235071)
chr2 (219-305)||(7542514-7542600)
chr2 (217-305)||(43625700-43625788)
chr2 (220-302)||(16661787-16661869)
chr2 (208-297)||(11999690-11999779)
[»] chr8 (1 HSPs)
chr8 (214-305)||(43745137-43745226)
[»] chr5 (1 HSPs)
chr5 (214-305)||(28220239-28220330)


Alignment Details
Target: chr7 (Bit Score: 139; Significance: 9e-73; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 14 - 207
Target Start/End: Complemental strand, 10552246 - 10552053
Alignment:
Q  14 aggtacgaggtgagcacgataatcacatggttcatatactcgtgggacgattaaaaactatttgaagtggaataagttccgggcagaatgagnnnnnnnn 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||            
T  10552246 aggtacgaggtgagcacgataatcacatggttcatatactcgtgggacgattaaaaactatttgaagtggaataagttccaggcagaatgagaaaaaata 10552147  T
Q  114 nnnnnctgttttgtccggaaacaagcatctggacaacacaatttttcccccaaatgtgtacttccaaaaggggaggaaatttgggaatcaatag 207  Q
         |||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10552146 aaaaactgtttcgtccggaaacaagcatccggacaacacaattttttccccaaatgtgtacttccaaaaggggaggaaatttgggaatcaatag 10552053  T

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Target: chr7; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 207 - 306
Target Start/End: Original strand, 10494156 - 10494255
Alignment:
Q  207 gtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgtc 306  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  10494156 gtcaccagtcaagaatgctgttgttactgtgccggcttacttcaacgattctcaacgaaaggctactattgatgctggtgctattgctggccttaatgtc 10494255  T

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Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 207 - 303
Target Start/End: Original strand, 13333238 - 13333334
Alignment:
Q  207 gtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaat 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  13333238 gtcaccagtcaagaatgccgttgttactgtgccggcttacttcaatgattctcagcgaaaggccaccatagatgctggtgctattgctggccttaat 13333334  T

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Target: chr7; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 214 - 306
Target Start/End: Complemental strand, 8667798 - 8667706
Alignment:
Q  214 gtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgtc 306  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||||||||||| |||||||||| |||||||||    
T  8667798 gtcaagaatgccgttgttactgtgccagcttacttcaatgattctcagcgaaaggccaccatagatgctggtactattgctggacttaatgtc 8667706  T

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Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 8671411 - 8671511
Alignment:
Q  206 agtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    ||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||| |||| |||||| || ||||||||| |||||||||| ||||||||    
T  8671411 agtcaccggtcaagaatgccgttgttaccgtgccagcttacttcaatgattctcagcgaacggccaccattgatgctggtactattgctggacttaatgt 8671510  T
Q  306 c 306  Q
    |    
T  8671511 c 8671511  T

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Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 206 - 305
Target Start/End: Original strand, 7877514 - 7877613
Alignment:
Q  206 agtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||| |||||||||||||| ||||| | ||||||||||||  |||| ||||| |||||    
T  7877514 agtcacctgtcaagaatgcagttgttactgtgccggcttatttcaatgattctcaacgaaaagccacaaaagatgctggtgcagttgccggcctcaatgt 7877613  T

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Target: chr7; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 8602361 - 8602262
Alignment:
Q  206 agtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    ||||||| ||||||||||| |||||||||||||||||||| || || |||||||| ||||| ||||| | |||||||||||| |||||||| || |||||    
T  8602361 agtcacctgtcaagaatgcagttgttactgtgccggcttattttaatgattctcagcgaaaagccacaaaagatgctggtgccattgctggtctcaatgt 8602262  T

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Target: chr7; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 230 - 305
Target Start/End: Complemental strand, 17268302 - 17268227
Alignment:
Q  230 ttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||  |||||||||||||||||    
T  17268302 ttactgtcccggcttacttcaacgattctcagcgaaaagccaccatagatgctggtgtcattgctggccttaatgt 17268227  T

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Target: chr7; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 303
Target Start/End: Complemental strand, 8647253 - 8647167
Alignment:
Q  217 aagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaat 303  Q
    |||||||| |||||||||||||| || |||||||| |||| ||| ||||| |||||||||||||| || || |||||||||||||||    
T  8647253 aagaatgcagttgttactgtgcctgcatacttcaatgattatcagcgaaaagccactatagatgccggggccattgctggccttaat 8647167  T

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Target: chr7; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 302
Target Start/End: Complemental strand, 8654835 - 8654741
Alignment:
Q  208 tcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaa 302  Q
    ||||| ||||| |||| |||||||||||||||||| |||||||| || ||||| ||||| || || |||||||||||||| |||||||| |||||    
T  8654835 tcacccgtcaaaaatgtcgttgttactgtgccggcatacttcaatgactctcagcgaaaagcaaccatagatgctggtgccattgctggacttaa 8654741  T

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Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 305
Target Start/End: Complemental strand, 6789885 - 6789800
Alignment:
Q  220 aatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    ||||| ||| |||||||||| ||||| ||||| ||||||||||| || |||||| ||||||||||||| |||||||| ||||||||    
T  6789885 aatgcagttattactgtgcctgcttatttcaatgattctcaacggaaagccactttagatgctggtgccattgctggtcttaatgt 6789800  T

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Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 305
Target Start/End: Original strand, 8585501 - 8585586
Alignment:
Q  220 aatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    ||||| ||||| |||||||| ||||| ||||| |||||||| ||||| ||||| || ||||||||||| |||||||||||||||||    
T  8585501 aatgcagttgtgactgtgcctgcttatttcaatgattctcagcgaaaagccaccatggatgctggtgccattgctggccttaatgt 8585586  T

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Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 306
Target Start/End: Complemental strand, 1301850 - 1301751
Alignment:
Q  207 gtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgtc 306  Q
    ||||||||| |  ||||| |||||||||||||| ||  | ||||| |||||||| ||||| ||||| |||||||| ||||| ||||||||||||||||||    
T  1301850 gtcaccagtgacaaatgctgttgttactgtgcctgcacatttcaatgattctcagcgaaaagccaccatagatgccggtgcaattgctggccttaatgtc 1301751  T

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Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 306
Target Start/End: Complemental strand, 8659749 - 8659650
Alignment:
Q  207 gtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgtc 306  Q
    |||||| || |||||||| |||||||| ||||| || || ||||| |||||||| ||||| ||||| |||||| | ||||| ||||||||||||||||||    
T  8659749 gtcacctgtgaagaatgctgttgttacagtgcctgcatagttcaatgattctcagcgaaaagccaccatagattccggtgccattgctggccttaatgtc 8659650  T

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Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 305
Target Start/End: Complemental strand, 17260604 - 17260529
Alignment:
Q  230 ttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    ||||||| || ||||| ||||| |||||||| ||||| ||||| ||||||||||||| ||||||||||||| ||||    
T  17260604 ttactgttcctgcttatttcaatgattctcagcgaaaagccaccatagatgctggtgttattgctggcctttatgt 17260529  T

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Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 303
Target Start/End: Original strand, 8640339 - 8640425
Alignment:
Q  217 aagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaat 303  Q
    |||||||| ||||||||| |||| ||||||||||| |||| ||| | ||| ||||| |||||||| || || |||||||||||||||    
T  8640339 aagaatgcagttgttactatgcctgcttacttcaatgattatcagcaaaaagccaccatagatgccggggccattgctggccttaat 8640425  T

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Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 303
Target Start/End: Complemental strand, 3147651 - 3147562
Alignment:
Q  214 gtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaat 303  Q
    ||||||||||| |||||||| || || ||||| ||||| ||| |||| || || || || ||||||||||||| ||||||||||||||||    
T  3147651 gtcaagaatgcagttgttaccgtacctgcttatttcaatgatgctcagcggaaagcgacaatagatgctggtgttattgctggccttaat 3147562  T

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Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 305
Target Start/End: Complemental strand, 8628905 - 8628820
Alignment:
Q  220 aatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    ||||| ||||| || ||||| ||||| ||||| |||||||| ||||| ||||| ||  |||||||||| |||||||||||||||||    
T  8628905 aatgcagttgtcaccgtgcctgcttatttcaatgattctcagcgaaaagccaccatgaatgctggtgccattgctggccttaatgt 8628820  T

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Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 8382677 - 8382756
Alignment:
Q  226 gttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    |||||||| ||||| || || ||||| ||||||||||| || ||||| | |||||||||||| ||||||||||| |||||    
T  8382677 gttgttaccgtgcctgcatatttcaatgattctcaacggaaagccacaaaagatgctggtgcgattgctggcctcaatgt 8382756  T

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Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 305
Target Start/End: Original strand, 8636132 - 8636223
Alignment:
Q  214 gtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    ||||||||||| ||  |||||||||| ||||| ||||| |||||||| || ||  |||| | |||||||||||| ||||| |||||||||||    
T  8636132 gtcaagaatgcagtcattactgtgcccgcttatttcaatgattctcagcgtaaatccaccaaagatgctggtgccattgccggccttaatgt 8636223  T

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Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 27830685 - 27830755
Alignment:
Q  235 gtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    ||||| ||||| ||||| || ||||||||||| |||||| ||||| | ||||| |||||||||||||||||    
T  27830685 gtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggccttaatgt 27830755  T

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Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 297
Target Start/End: Complemental strand, 8591025 - 8590934
Alignment:
Q  206 agtcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggc 297  Q
    ||||||| ||||||||||| |||||||||||||| ||||| || || ||||||||  | || || || | |||||||||||  |||||||||    
T  8591025 agtcacctgtcaagaatgcagttgttactgtgccagcttattttaatgattctcagaggaaagctaccaaagatgctggtgtcattgctggc 8590934  T

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Target: chr1 (Bit Score: 118; Significance: 3e-60; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 14 - 207
Target Start/End: Complemental strand, 24582557 - 24582362
Alignment:
Q  14 aggtacgaggtgagcacgataatcacatggttcatatactcgtgggacgattaaaaactatttgaagtggaataagttccgggcagaatg--agnnnnnn 111  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |           
T  24582557 aggtacgaggtgagcacgataatcacttagttcatatactcgtgggacgattaaaaactatttgaagtggaataagttccgggtagaatgaaaaaaaaaa 24582458  T
Q  112 nnnnnnnctgttttgtccggaaacaagcatctggacaacacaatttttcccccaaatgtgtacttccaaaaggggaggaaatttgggaatcaatag 207  Q
           |||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  24582457 aaaaaaactgttttgtccggaaacaagcatccggacaacacaattttttcgccaaatgtgtacttccaaaaggggaggaaatttgggaatcaatag 24582362  T

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Target: chr1; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 4678350 - 4678439
Alignment:
Q  217 aagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgtc 306  Q
    ||||||| ||||||||||||||| || |||||||| |||||||||||||| || || |||||||||||||| |||||||| |||||||||    
T  4678350 aagaatgtcgttgttactgtgcctgcatacttcaatgattctcaacgaaaagctaccatagatgctggtgccattgctggacttaatgtc 4678439  T

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Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 305
Target Start/End: Complemental strand, 15595414 - 15595329
Alignment:
Q  220 aatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    ||||| |||||||| ||||| |||||  |||| |||||||||||||| |||||||||||||| ||||| |||||||||||||||||    
T  15595414 aatgcagttgttaccgtgcctgcttatctcaatgattctcaacgaaaagccactatagatgcaggtgccattgctggccttaatgt 15595329  T

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Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 34466576 - 34466673
Alignment:
Q  208 tcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    |||||| | |||||||| ||| | || ||||| ||||| || || |||||||| ||||| || ||| | ||||||||| |||||||||||||||||||    
T  34466576 tcaccaattaagaatgcagttatcaccgtgcctgcttattttaatgattctcagcgaaaagctactgtggatgctggtactattgctggccttaatgt 34466673  T

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Target: chr4 (Bit Score: 69; Significance: 6e-31; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 214 - 306
Target Start/End: Original strand, 9335680 - 9335772
Alignment:
Q  214 gtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgtc 306  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||||||| |||||||||||| ||||||||||||||||||||    
T  9335680 gtcaagaatgccgttgttaccgtgccagcttacttcaatgattctcagcgaaaggccaccatagatgctggtactattgctggccttaatgtc 9335772  T

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Target: chr4; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 35132824 - 35132745
Alignment:
Q  217 aagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctgg 296  Q
    |||||||| |||||||||||||| ||||| || |  |||||||||||||| |||||||||||||||||||||||||||||    
T  35132824 aagaatgcagttgttactgtgcctgcttattttagtgattctcaacgaaaagccactatagatgctggtgctattgctgg 35132745  T

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Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 23587525 - 23587571
Alignment:
Q  217 aagaatgccgttgttactgtgccggcttacttcaacgattctcaacg 263  Q
    |||||||||||||| |||||||| ||||||||||||||||| |||||    
T  23587525 aagaatgccgttgtaactgtgcctgcttacttcaacgattcacaacg 23587571  T

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Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 305
Target Start/End: Complemental strand, 30775634 - 30775540
Alignment:
Q  211 ccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    ||||| || ||||| ||| | |||||||| ||||| ||||| ||| | || ||||| |||||||| ||||||||||| |||||||| ||||||||    
T  30775634 ccagttaaaaatgcagttatcactgtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgt 30775540  T

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Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 291
Target Start/End: Complemental strand, 54396805 - 54396725
Alignment:
Q  211 ccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctatt 291  Q
    ||||| |||||||| ||||||||||| || ||||| ||||| |||||||||||  | || || | ||||||||||||||||    
T  54396805 ccagtgaagaatgctgttgttactgttcctgcttatttcaatgattctcaacgtcaagctacgaaagatgctggtgctatt 54396725  T

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Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 214 - 306
Target Start/End: Original strand, 16657306 - 16657398
Alignment:
Q  214 gtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgtc 306  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||| || ||||| ||||| |||||||||||||| || |||||||||||||||    
T  16657306 gtcaagaatgctgttgttactgtgccagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccatcgctggccttaatgtc 16657398  T

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Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 211 - 305
Target Start/End: Complemental strand, 12235071 - 12234977
Alignment:
Q  211 ccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    ||||| |||||||| |||||||| ||||| ||||| ||||| |||||||||||||| || ||||||||||||||||  ||||||||||| |||||    
T  12235071 ccagttaagaatgcagttgttaccgtgcctgcttatttcaatgattctcaacgaaaagcaactatagatgctggtgtcattgctggcctcaatgt 12234977  T

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Target: chr2; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 219 - 305
Target Start/End: Complemental strand, 7542600 - 7542514
Alignment:
Q  219 gaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    |||||| ||||||||||| || ||||| || || |||||||||||||| |||||||||||||| ||||| ||||||||||| |||||    
T  7542600 gaatgcagttgttactgtacctgcttattttaatgattctcaacgaaaagccactatagatgcgggtgccattgctggcctcaatgt 7542514  T

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Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 43625788 - 43625700
Alignment:
Q  217 aagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    |||||||| |||||||| ||||| ||||||||||| |||||||| ||||| ||||| ||||||| |||||  ||||  |||||||||||    
T  43625788 aagaatgcagttgttaccgtgcctgcttacttcaatgattctcagcgaaaagccaccatagatgttggtgtcattgtcggccttaatgt 43625700  T

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Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 302
Target Start/End: Original strand, 16661787 - 16661869
Alignment:
Q  220 aatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaa 302  Q
    ||||| ||||| ||||| || ||||| || ||||||||||| ||||| ||||| || ||||||||||| ||||||||||||||    
T  16661787 aatgcagttgtcactgttcctgcttattttaacgattctcagcgaaaagccaccatggatgctggtgccattgctggccttaa 16661869  T

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Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 297
Target Start/End: Complemental strand, 11999779 - 11999690
Alignment:
Q  208 tcaccagtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggc 297  Q
    ||||| || |||||||  ||||||||||| || ||||| || |  |||||||||||||| |||||||||||||| ||||| |||||||||    
T  11999779 tcaccggtaaagaatgttgttgttactgtaccagcttattttagtgattctcaacgaaaagccactatagatgccggtgcaattgctggc 11999690  T

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Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 305
Target Start/End: Complemental strand, 43745226 - 43745137
Alignment:
Q  214 gtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    ||||||||||| |||||||||||||||||||| ||||| |||| ||| || || |||||  ||||||||||||| |||||||| ||| ||||    
T  43745226 gtcaagaatgcagttgttactgtgccggcttatttcaatgattatcagcggaaagccac--tagatgctggtgccattgctgggcttgatgt 43745137  T

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Target: chr5 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 214 - 305
Target Start/End: Complemental strand, 28220330 - 28220239
Alignment:
Q  214 gtcaagaatgccgttgttactgtgccggcttacttcaacgattctcaacgaaaggccactatagatgctggtgctattgctggccttaatgt 305  Q
    ||||||||||| ||| |||||||||| ||||| ||||| |||| ||| || || ||||| |||||||| ||| | |||||||| || |||||    
T  28220330 gtcaagaatgcagttattactgtgcctgcttatttcaatgattatcagcggaaagccaccatagatgcaggtaccattgctggtctaaatgt 28220239  T

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