View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9411_low_3 (Length: 565)

Name: NF9411_low_3
Description: NF9411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9411_low_3
NF9411_low_3
[»] chr6 (38 HSPs)
chr6 (1-384)||(13750223-13750606)
chr6 (1-369)||(18659170-18659540)
chr6 (18-378)||(24441386-24441746)
chr6 (57-369)||(29847280-29847592)
chr6 (45-382)||(29415545-29415882)
chr6 (58-373)||(5109716-5110031)
chr6 (35-362)||(16132404-16132732)
chr6 (58-347)||(19443038-19443326)
chr6 (135-384)||(24267566-24267815)
chr6 (4-123)||(611787-611906)
chr6 (283-384)||(31468006-31468108)
chr6 (251-384)||(18259372-18259504)
chr6 (251-373)||(28948303-28948427)
chr6 (251-373)||(16447971-16448094)
chr6 (251-378)||(19102679-19102807)
chr6 (262-373)||(23532095-23532206)
chr6 (1-69)||(25618844-25618912)
chr6 (381-548)||(6124112-6124279)
chr6 (262-384)||(8226939-8227061)
chr6 (273-362)||(20177737-20177827)
chr6 (273-362)||(22158164-22158254)
chr6 (1-69)||(14978487-14978555)
chr6 (278-378)||(5289300-5289398)
chr6 (254-341)||(25753202-25753288)
chr6 (254-341)||(25755372-25755458)
chr6 (57-118)||(1639949-1640010)
chr6 (283-378)||(19174895-19174991)
chr6 (292-347)||(25348115-25348170)
chr6 (35-93)||(1254847-1254904)
chr6 (53-91)||(4477878-4477916)
chr6 (35-85)||(7430617-7430667)
chr6 (283-341)||(16136057-16136115)
chr6 (45-91)||(23839219-23839265)
chr6 (53-91)||(25397194-25397232)
chr6 (53-93)||(1368-1408)
chr6 (53-93)||(8327-8367)
chr6 (33-85)||(23620204-23620254)
chr6 (53-93)||(25348506-25348546)
[»] scaffold0273 (1 HSPs)
scaffold0273 (1-384)||(7399-7783)
[»] chr7 (52 HSPs)
chr7 (1-369)||(40554462-40554831)
chr7 (57-369)||(8756151-8756463)
chr7 (35-329)||(8249229-8249520)
chr7 (35-341)||(48744297-48744601)
chr7 (35-350)||(13898230-13898543)
chr7 (139-287)||(5295764-5295912)
chr7 (139-287)||(5296937-5297085)
chr7 (139-283)||(5294591-5294735)
chr7 (254-384)||(11054431-11054562)
chr7 (8-123)||(4326083-4326198)
chr7 (258-384)||(13256413-13256539)
chr7 (254-384)||(19486165-19486295)
chr7 (255-384)||(48274202-48274332)
chr7 (13-123)||(39431139-39431252)
chr7 (16-123)||(44190174-44190281)
chr7 (254-347)||(13698841-13698933)
chr7 (35-123)||(23556331-23556418)
chr7 (54-121)||(13864365-13864432)
chr7 (251-347)||(33001920-33002014)
chr7 (56-124)||(14274318-14274386)
chr7 (278-371)||(17467609-17467700)
chr7 (278-371)||(17585514-17585605)
chr7 (35-123)||(23557520-23557607)
chr7 (13-88)||(23461589-23461664)
chr7 (251-346)||(29004831-29004923)
chr7 (251-373)||(3288958-3289078)
chr7 (273-350)||(10063122-10063199)
chr7 (278-371)||(37380615-37380706)
chr7 (57-123)||(16463056-16463121)
chr7 (251-378)||(21734057-21734182)
chr7 (251-378)||(21734616-21734741)
chr7 (54-131)||(3288756-3288833)
chr7 (54-109)||(21733855-21733908)
chr7 (54-109)||(21734414-21734467)
chr7 (35-78)||(4994381-4994424)
chr7 (53-96)||(11311074-11311117)
chr7 (45-87)||(831622-831664)
chr7 (45-87)||(1196802-1196844)
chr7 (53-91)||(11382867-11382905)
chr7 (53-91)||(11389344-11389382)
chr7 (45-131)||(11662083-11662169)
chr7 (57-131)||(14188294-14188368)
chr7 (57-131)||(14190892-14190966)
chr7 (53-91)||(16009597-16009635)
chr7 (45-87)||(34958583-34958625)
chr7 (35-85)||(38829155-38829205)
chr7 (35-84)||(16574267-16574315)
chr7 (35-84)||(16591347-16591395)
chr7 (57-93)||(13256707-13256743)
chr7 (57-93)||(21230960-21230996)
chr7 (102-157)||(33002105-33002161)
chr7 (37-93)||(39994836-39994892)
[»] chr3 (50 HSPs)
chr3 (1-382)||(14818806-14819188)
chr3 (1-358)||(3393699-3394057)
chr3 (4-378)||(52337903-52338276)
chr3 (35-384)||(52212411-52212760)
chr3 (57-358)||(18366515-18366817)
chr3 (57-369)||(12276533-12276848)
chr3 (35-347)||(178460-178773)
chr3 (139-382)||(24340029-24340272)
chr3 (61-347)||(13029167-13029452)
chr3 (35-347)||(13025550-13025860)
chr3 (146-384)||(12159001-12159244)
chr3 (146-384)||(13511785-13512026)
chr3 (57-185)||(23392820-23392948)
chr3 (204-384)||(17547620-17547798)
chr3 (246-384)||(12536372-12536511)
chr3 (13-147)||(43929352-43929487)
chr3 (254-384)||(37641696-37641827)
chr3 (251-384)||(36167250-36167384)
chr3 (251-340)||(9511115-9511204)
chr3 (251-340)||(9519090-9519179)
chr3 (251-373)||(10551034-10551157)
chr3 (256-384)||(45530807-45530937)
chr3 (278-384)||(13667308-13667414)
chr3 (251-384)||(29172050-29172181)
chr3 (251-373)||(34851498-34851619)
chr3 (254-341)||(37038812-37038898)
chr3 (251-373)||(21619112-21619235)
chr3 (262-384)||(22146967-22147089)
chr3 (251-325)||(19568407-19568480)
chr3 (278-384)||(11849819-11849923)
chr3 (285-384)||(15517374-15517473)
chr3 (1-69)||(16645000-16645068)
chr3 (251-347)||(17513588-17513682)
chr3 (280-346)||(42324199-42324265)
chr3 (278-371)||(20188461-20188552)
chr3 (57-121)||(6820152-6820216)
chr3 (45-131)||(18893659-18893745)
chr3 (18-87)||(6804853-6804922)
chr3 (54-109)||(34851296-34851349)
chr3 (53-91)||(9534348-9534386)
chr3 (35-97)||(17513839-17513900)
chr3 (45-109)||(10833297-10833359)
chr3 (35-84)||(11325027-11325075)
chr3 (53-90)||(18929267-18929304)
chr3 (56-97)||(29171852-29171893)
chr3 (35-84)||(51602504-51602552)
chr3 (35-87)||(2247629-2247680)
chr3 (36-84)||(11913820-11913867)
chr3 (35-131)||(13437216-13437311)
chr3 (45-85)||(14288168-14288208)
[»] chr1 (30 HSPs)
chr1 (13-384)||(52983946-52984318)
chr1 (1-384)||(18824340-18824723)
chr1 (35-365)||(21660111-21660442)
chr1 (35-382)||(18271047-18271393)
chr1 (35-382)||(18275701-18276047)
chr1 (139-382)||(21473514-21473757)
chr1 (204-384)||(13527863-13528041)
chr1 (254-384)||(51476711-51476842)
chr1 (13-123)||(35064523-35064633)
chr1 (250-378)||(7320792-7320920)
chr1 (251-347)||(51324262-51324357)
chr1 (278-373)||(20058215-20058310)
chr1 (16-123)||(20058470-20058577)
chr1 (265-346)||(21239257-21239338)
chr1 (1-69)||(13880482-13880550)
chr1 (251-347)||(7791756-7791850)
chr1 (1-87)||(44821965-44822051)
chr1 (278-347)||(20030866-20030934)
chr1 (35-78)||(297393-297436)
chr1 (35-78)||(45308185-45308228)
chr1 (5-87)||(25091366-25091448)
chr1 (54-91)||(20805342-20805379)
chr1 (54-93)||(32651591-32651630)
chr1 (35-85)||(2332041-2332091)
chr1 (35-97)||(7791538-7791599)
chr1 (45-91)||(20437012-20437058)
chr1 (39-97)||(21526767-21526824)
chr1 (35-101)||(28203735-28203800)
chr1 (58-122)||(13227876-13227940)
chr1 (53-93)||(18712818-18712858)
[»] chr8 (32 HSPs)
chr8 (4-362)||(32950645-32951004)
chr8 (101-378)||(22583703-22583981)
chr8 (58-384)||(24979836-24980162)
chr8 (101-384)||(23889525-23889808)
chr8 (139-382)||(17611384-17611616)
chr8 (146-383)||(34302270-34302508)
chr8 (146-384)||(24496322-24496563)
chr8 (18-199)||(17272598-17272779)
chr8 (146-384)||(23451191-23451432)
chr8 (254-378)||(3273613-3273739)
chr8 (13-147)||(22919927-22920062)
chr8 (251-373)||(26220282-26220405)
chr8 (251-347)||(22532331-22532426)
chr8 (251-347)||(22537016-22537111)
chr8 (251-347)||(39694476-39694572)
chr8 (278-347)||(44522402-44522470)
chr8 (18-87)||(20458014-20458083)
chr8 (35-78)||(28854846-28854889)
chr8 (46-84)||(21931725-21931763)
chr8 (309-373)||(26222538-26222603)
chr8 (46-87)||(38184685-38184726)
chr8 (45-93)||(23482041-23482089)
chr8 (292-347)||(39364532-39364587)
chr8 (34-93)||(42559433-42559491)
chr8 (57-110)||(14056564-14056615)
chr8 (35-85)||(20387508-20387557)
chr8 (57-110)||(25111980-25112031)
chr8 (56-93)||(43113041-43113078)
chr8 (54-90)||(18614294-18614330)
chr8 (45-77)||(19750585-19750617)
chr8 (57-93)||(22433615-22433651)
chr8 (53-93)||(39364939-39364979)
[»] chr5 (28 HSPs)
chr5 (3-384)||(22777016-22777397)
chr5 (18-384)||(8952002-8952368)
chr5 (35-384)||(22356883-22357231)
chr5 (57-319)||(21663143-21663405)
chr5 (33-347)||(22470588-22470899)
chr5 (230-384)||(10817531-10817686)
chr5 (3-131)||(10817790-10817918)
chr5 (283-373)||(21297585-21297676)
chr5 (246-383)||(18318396-18318534)
chr5 (285-373)||(21311130-21311219)
chr5 (278-358)||(21405854-21405935)
chr5 (262-384)||(40726411-40726533)
chr5 (278-384)||(20765478-20765584)
chr5 (251-378)||(23539493-23539618)
chr5 (56-124)||(30137973-30138041)
chr5 (251-361)||(22007085-22007194)
chr5 (45-93)||(23111188-23111236)
chr5 (57-108)||(24276499-24276550)
chr5 (57-108)||(24385663-24385714)
chr5 (37-84)||(26707397-26707444)
chr5 (37-84)||(26977131-26977178)
chr5 (53-91)||(18407940-18407978)
chr5 (53-91)||(19512407-19512445)
chr5 (53-91)||(28370051-28370089)
chr5 (35-93)||(36461059-36461116)
chr5 (57-97)||(22438748-22438788)
chr5 (45-97)||(23539777-23539829)
chr5 (35-131)||(33472543-33472638)
[»] chr4 (52 HSPs)
chr4 (7-384)||(14931077-14931454)
chr4 (1-369)||(10705468-10705837)
chr4 (1-369)||(10919238-10919607)
chr4 (3-384)||(6512344-6512726)
chr4 (58-384)||(20898752-20899077)
chr4 (13-347)||(3338129-3338459)
chr4 (139-382)||(16224102-16224345)
chr4 (139-382)||(15368253-15368496)
chr4 (35-347)||(15991026-15991337)
chr4 (139-382)||(15371761-15372005)
chr4 (139-382)||(15374054-15374297)
chr4 (1-123)||(8711517-8711639)
chr4 (251-373)||(14280980-14281103)
chr4 (258-384)||(18230461-18230587)
chr4 (4-123)||(29856676-29856795)
chr4 (57-147)||(13043769-13043859)
chr4 (251-384)||(54798103-54798237)
chr4 (254-347)||(9870648-9870740)
chr4 (265-384)||(22354399-22354518)
chr4 (251-384)||(2584344-2584475)
chr4 (251-384)||(4830357-4830488)
chr4 (251-384)||(4833652-4833783)
chr4 (251-384)||(13447251-13447382)
chr4 (62-123)||(15344922-15344983)
chr4 (35-123)||(15447355-15447442)
chr4 (276-382)||(15403265-15403370)
chr4 (251-384)||(27028467-27028598)
chr4 (57-124)||(27028730-27028798)
chr4 (35-109)||(45005943-45006015)
chr4 (251-361)||(16157538-16157647)
chr4 (1-40)||(8711652-8711691)
chr4 (54-97)||(13888657-13888700)
chr4 (35-78)||(38979933-38979976)
chr4 (53-91)||(8834917-8834955)
chr4 (35-78)||(33849780-33849823)
chr4 (54-84)||(15245244-15245274)
chr4 (45-87)||(15747545-15747587)
chr4 (35-97)||(16370702-16370763)
chr4 (53-87)||(17143260-17143294)
chr4 (54-131)||(13447507-13447584)
chr4 (322-373)||(4615319-4615371)
chr4 (45-97)||(4830146-4830198)
chr4 (45-97)||(4833441-4833493)
chr4 (33-85)||(13878803-13878853)
chr4 (33-85)||(13882408-13882458)
chr4 (57-93)||(15408158-15408194)
chr4 (35-131)||(15712674-15712769)
chr4 (57-93)||(18230755-18230791)
chr4 (45-93)||(24046468-24046516)
chr4 (35-131)||(28386221-28386316)
chr4 (37-85)||(32490765-32490812)
chr4 (57-93)||(56114762-56114798)
[»] scaffold0429 (1 HSPs)
scaffold0429 (13-384)||(1956-2328)
[»] scaffold0107 (2 HSPs)
scaffold0107 (4-384)||(3613-3992)
scaffold0107 (57-93)||(40532-40568)
[»] scaffold0962 (1 HSPs)
scaffold0962 (57-384)||(616-944)
[»] scaffold0181 (1 HSPs)
scaffold0181 (57-384)||(25521-25849)
[»] chr2 (29 HSPs)
chr2 (35-362)||(21245426-21245753)
chr2 (35-362)||(24273013-24273341)
chr2 (58-347)||(26904164-26904451)
chr2 (35-347)||(28349925-28350228)
chr2 (204-384)||(6477385-6477563)
chr2 (230-384)||(22703696-22703851)
chr2 (1-123)||(43706997-43707119)
chr2 (254-384)||(19358606-19358740)
chr2 (3-97)||(22703989-22704083)
chr2 (283-384)||(24087798-24087899)
chr2 (265-347)||(43707253-43707335)
chr2 (60-123)||(31521155-31521218)
chr2 (283-383)||(45617836-45617937)
chr2 (71-123)||(22790275-22790327)
chr2 (35-78)||(20590254-20590297)
chr2 (35-78)||(23338371-23338414)
chr2 (45-131)||(21072677-21072763)
chr2 (45-131)||(41300918-41301004)
chr2 (4-85)||(23149625-23149706)
chr2 (4-85)||(23561415-23561496)
chr2 (53-93)||(23265161-23265201)
chr2 (53-93)||(23280229-23280269)
chr2 (35-97)||(6477216-6477277)
chr2 (45-91)||(6483738-6483784)
chr2 (45-91)||(6487205-6487251)
chr2 (35-93)||(10039040-10039097)
chr2 (53-90)||(21908381-21908418)
chr2 (54-91)||(24661598-24661635)
chr2 (33-85)||(22110558-22110608)
[»] scaffold0004 (5 HSPs)
scaffold0004 (33-382)||(60150-60497)
scaffold0004 (251-384)||(75511-75645)
scaffold0004 (1-123)||(204294-204416)
scaffold0004 (251-373)||(72675-72797)
scaffold0004 (54-93)||(116915-116954)
[»] scaffold0447 (2 HSPs)
scaffold0447 (35-358)||(7598-7921)
scaffold0447 (35-358)||(12212-12535)
[»] scaffold0383 (1 HSPs)
scaffold0383 (35-358)||(10207-10530)
[»] scaffold2046 (1 HSPs)
scaffold2046 (161-384)||(910-1133)
[»] scaffold0042 (1 HSPs)
scaffold0042 (58-347)||(51966-52254)
[»] scaffold0126 (1 HSPs)
scaffold0126 (56-365)||(6787-7097)
[»] scaffold0453 (1 HSPs)
scaffold0453 (141-384)||(3836-4080)
[»] scaffold0371 (1 HSPs)
scaffold0371 (112-384)||(3597-3872)
[»] scaffold0117 (3 HSPs)
scaffold0117 (180-384)||(25854-26058)
scaffold0117 (255-382)||(40412-40540)
scaffold0117 (17-83)||(26057-26123)
[»] scaffold0247 (1 HSPs)
scaffold0247 (141-382)||(17336-17577)
[»] scaffold0149 (1 HSPs)
scaffold0149 (146-384)||(35633-35871)
[»] scaffold0377 (1 HSPs)
scaffold0377 (146-384)||(16192-16432)
[»] scaffold0037 (2 HSPs)
scaffold0037 (251-384)||(113166-113300)
scaffold0037 (261-384)||(118010-118134)
[»] scaffold0106 (2 HSPs)
scaffold0106 (1-123)||(21971-22093)
scaffold0106 (213-347)||(21741-21875)
[»] scaffold0234 (1 HSPs)
scaffold0234 (1-123)||(25926-26048)
[»] scaffold0256 (1 HSPs)
scaffold0256 (101-347)||(1890-2138)
[»] scaffold0331 (2 HSPs)
scaffold0331 (251-384)||(4424-4556)
scaffold0331 (58-107)||(4708-4757)
[»] scaffold0016 (1 HSPs)
scaffold0016 (13-123)||(174063-174173)
[»] scaffold0083 (2 HSPs)
scaffold0083 (251-347)||(10952-11048)
scaffold0083 (251-347)||(5234-5330)
[»] scaffold0720 (2 HSPs)
scaffold0720 (251-384)||(640-772)
scaffold0720 (35-131)||(420-515)
[»] scaffold0174 (3 HSPs)
scaffold0174 (251-372)||(19438-19560)
scaffold0174 (251-340)||(11154-11243)
scaffold0174 (251-340)||(5034-5123)
[»] scaffold0023 (1 HSPs)
scaffold0023 (57-147)||(163296-163386)
[»] scaffold0008 (1 HSPs)
scaffold0008 (251-372)||(72389-72511)
[»] scaffold0175 (2 HSPs)
scaffold0175 (253-384)||(18568-18698)
scaffold0175 (58-124)||(18832-18899)
[»] scaffold0017 (1 HSPs)
scaffold0017 (273-359)||(730-816)
[»] scaffold1276 (2 HSPs)
scaffold1276 (258-384)||(861-986)
scaffold1276 (57-93)||(1154-1190)
[»] scaffold0364 (1 HSPs)
scaffold0364 (1-93)||(8179-8271)
[»] scaffold0956 (1 HSPs)
scaffold0956 (13-123)||(2050-2160)
[»] scaffold0825 (1 HSPs)
scaffold0825 (262-347)||(594-679)
[»] scaffold0123 (3 HSPs)
scaffold0123 (254-347)||(7033-7125)
scaffold0123 (251-373)||(1466-1586)
scaffold0123 (45-131)||(1255-1341)
[»] scaffold0113 (1 HSPs)
scaffold0113 (258-350)||(35245-35337)
[»] scaffold0080 (2 HSPs)
scaffold0080 (251-347)||(29741-29835)
scaffold0080 (251-347)||(35206-35300)
[»] scaffold0021 (1 HSPs)
scaffold0021 (251-384)||(147344-147475)
[»] scaffold0022 (1 HSPs)
scaffold0022 (264-384)||(117148-117268)
[»] scaffold0180 (2 HSPs)
scaffold0180 (1-69)||(28273-28341)
scaffold0180 (53-87)||(11651-11685)
[»] scaffold0026 (2 HSPs)
scaffold0026 (18-87)||(10122-10191)
scaffold0026 (18-87)||(22198-22267)
[»] scaffold0490 (2 HSPs)
scaffold0490 (46-131)||(5859-5944)
scaffold0490 (251-361)||(5626-5734)
[»] scaffold0035 (1 HSPs)
scaffold0035 (13-64)||(59676-59727)
[»] scaffold0309 (2 HSPs)
scaffold0309 (46-131)||(9115-9200)
scaffold0309 (251-361)||(8881-8990)
[»] scaffold0338 (1 HSPs)
scaffold0338 (56-116)||(229-289)
[»] scaffold0031 (2 HSPs)
scaffold0031 (45-84)||(121931-121970)
scaffold0031 (45-84)||(132807-132846)
[»] scaffold0388 (1 HSPs)
scaffold0388 (35-93)||(15084-15141)
[»] scaffold0138 (1 HSPs)
scaffold0138 (54-91)||(12318-12355)
[»] scaffold0222 (1 HSPs)
scaffold0222 (53-93)||(16839-16879)
[»] scaffold0077 (1 HSPs)
scaffold0077 (45-93)||(22093-22141)
[»] scaffold0053 (1 HSPs)
scaffold0053 (54-90)||(79089-79125)
[»] scaffold0020 (1 HSPs)
scaffold0020 (53-93)||(101924-101964)
[»] scaffold0169 (1 HSPs)
scaffold0169 (45-84)||(7004-7043)
[»] scaffold0815 (1 HSPs)
scaffold0815 (54-123)||(1440-1507)
[»] scaffold0635 (1 HSPs)
scaffold0635 (35-93)||(7973-8030)
[»] scaffold0335 (1 HSPs)
scaffold0335 (54-84)||(2625-2655)
[»] scaffold0599 (1 HSPs)
scaffold0599 (36-93)||(1087-1143)
[»] scaffold0422 (1 HSPs)
scaffold0422 (57-109)||(3962-4012)
[»] scaffold0298 (1 HSPs)
scaffold0298 (54-87)||(623-656)
[»] scaffold0096 (1 HSPs)
scaffold0096 (58-91)||(39508-39541)
[»] scaffold0034 (1 HSPs)
scaffold0034 (35-84)||(33909-33957)
[»] scaffold0500 (1 HSPs)
scaffold0500 (33-85)||(10689-10739)
[»] scaffold0019 (1 HSPs)
scaffold0019 (57-93)||(135492-135528)


Alignment Details
Target: chr6 (Bit Score: 328; Significance: 0; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 1 - 384
Target Start/End: Original strand, 13750223 - 13750606
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgta 100  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13750223 agggagaagagccaagtgaagaaccggagagatcgtagagcttcgttcgtcagaattaaggtaaggctgaggctaactctcaataatcatagtgtatgta 13750322  T
Q  101 aattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggatt 200  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13750323 aattctgaaattgatttaacatgtacttgtttatgaatttgggaattagggttagaatatagaattgaatcgttggaagaagtaggtaatctgatggatt 13750422  T
Q  201 agggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaa 300  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  13750423 agggtgataaaggatgtttagattgtagattaatcacagactaagtttctaatcaattttggggtttgggtcgatggaaattgggattttcacttgaaaa 13750522  T
Q  301 gtcggtgtctaaacgtttttgcaaataagagattatgtgagatttggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  13750523 gtcggtgtctaaacgtttttgcaaataagagattatgtgaggtttggaaatcgatttttgggtggttgaaacttgaatctttct 13750606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 369
Target Start/End: Complemental strand, 18659540 - 18659170
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgta 100  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18659540 agggagaagagccaagtgaagaaccggagagattgtagagcttcgttcgtcagaattaaggtaagggtgagactaactctcaataatcatagtgtatgta 18659441  T
Q  101 aattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggatt 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18659440 aattctgaaattgatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggatt 18659341  T
Q  201 agggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaa 300  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| ||| | ||||||||||||||||||||| ||||||| |||  ||||  |||||||||    
T  18659340 agggtgataaaggatgtttagattgcagattaatcacggactaggttcccaatcagttttggggtttgggttgatggaagttgaaatttatgcttgaaaa 18659241  T
Q  301 gtcggtgtctaaacgtttttgcaaataagagattatgtgagattt--ggaaatcgatttttgggtggttga 369  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||  ||||||||||||| ||||||||||    
T  18659240 gtcggagtctaaacgtttttgcaaacaagagattatgtgaggttttgggaaatcgattttggggtggttga 18659170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 18 - 378
Target Start/End: Complemental strand, 24441746 - 24441386
Alignment:
Q  18 gaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggattt 117  Q
    ||||||||| ||  ||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||| |||||    
T  24441746 gaagaaccggagcaatcgtagagcttcgttcatctaaattaaggtaagggtgagactaactctcaataatcatagtgtttgtgaattctgaaattgattt 24441647  T
Q  118 aacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgt 217  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| || | ||||||||| ||||||||||||||||||||||| |||||||    
T  24441646 aacatgtggttgtttatgaatttgggaattagggttaaaatgtagaattgaattgtggaaagaagtagataatctgatggattagggtgataaaggatgt 24441547  T
Q  218 ttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtt 317  Q
    |||||||| || ||||| |||||||||||||| ||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |    
T  24441546 ttagattgtaggttaattacagactaagtttccaatcaatattggggtttgagtcgatggaaattgggattttcgtttgaaaagtcggtgtctaaacg-t 24441448  T
Q  318 tttgcaaataagagattatgtgagattt-ggaaatcgatttttgggtggttgaaactcgaat 378  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||||||||||||| ||||    
T  24441447 tttgcaaataagagattatgtggggtttgggaaatcgatttttgggtggttgaaacttgaat 24441386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 57 - 369
Target Start/End: Original strand, 29847280 - 29847592
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttaga 156  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29847280 taaggtaagggtgaggctaactctcaataatcatagtgcatgtaaattctgaaattgatttaacatgtagttgtttatgaatttgggaattagggttaga 29847379  T
Q  157 atgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcag 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||| | ||||||    
T  29847380 atgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgataaaggatg-ttagattgcagattaatcacggactaagttcccaatcag 29847478  T
Q  257 ttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgat 355  Q
    |||| |||||||||||||||||||||||  |||  |||||||||||||| |||||||| |||||||||| ||||||||||||||| ||| ||||||||||    
T  29847479 ttttcgggtttgggtcgatggaaattggagtttatgcttgaaaagtcggagtctaaacatttttgcaaacaagagattatgtgaggtttgggaaatcgat 29847578  T
Q  356 ttttgggtggttga 369  Q
    ||| ||||||||||    
T  29847579 tttggggtggttga 29847592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 45 - 382
Target Start/End: Original strand, 29415545 - 29415882
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttatgaatttggga 144  Q
    |||||||| || ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  29415545 gttcatcaaaactaaggtaagagtgaggctaactctcaataatcatagtgtatgtaaactctgaaattgatttaacatgtagttgtttatgaagttggga 29415644  T
Q  145 attagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaa 244  Q
    |||||||||||||||||||||||||| || | ||||||||| |||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  29415645 attagggttagaatgtagaattgaattgtggaaagaagtagataatttgatggattaggatgataaaggatgtttagattgtagattaatcacagactaa 29415744  T
Q  245 gtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt 344  Q
    ||||| ||||||| ||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||| ||    
T  29415745 gtttccaatcagtattggggtttgggttgatggaaattgcgattttcgtttgaaaaatcggtgtctaaacg-ttttgcaaataagagattatgtgaggtt 29415843  T
Q  345 t-ggaaatcgatttttgggtggttgaaactcgaatcttt 382  Q
    | ||||||| |||||||||||||||||||| ||||||||    
T  29415844 tgggaaatcaatttttgggtggttgaaacttgaatcttt 29415882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 58 - 373
Target Start/End: Original strand, 5109716 - 5110031
Alignment:
Q  58 aaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaa 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  5109716 aaggtaagggtgaggctaactctcaataatcatagtgtatgtaaaatctgaaattgatttaacatgtagttgtttatgaatttgggaattagggttagag 5109815  T
Q  158 tgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagt 257  Q
    ||||||||||||| || | |||| |||| ||| ||||||||||||||||||| ||||||||||||||| | |||||||  |||||||||||| |||||||    
T  5109816 tgtagaattgaattgtggaaagatgtagataaactgatggattagggtgataaaggatgtttagattgtaaattaatcctagactaagtttccaatcagt 5109915  T
Q  258 tttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgatt 356  Q
     ||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||| |||||||||| ||| |||||||||||    
T  5109916 attggggtttgggttgatggaaattgggattttcgtttgaaaaatcggtgtctaaacg-ttttgcaaataagatattatgtgaggtttgggaaatcgatt 5110014  T
Q  357 tttgggtggttgaaact 373  Q
    ||||| |||||||||||    
T  5110015 tttggttggttgaaact 5110031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 35 - 362
Target Start/End: Original strand, 16132404 - 16132732
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggattt-aacatgtagttgttta 133  Q
    ||||||||| |||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||    
T  16132404 gtagagctttgttcatca-atttaaggtaagggtgaggctaactctcaataatcttagtgtatgtaaattctgaaattgattttaacatgtagttgttta 16132502  T
Q  134 tgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaa 233  Q
    || ||||| ||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||| |||||||| ||||| |    
T  16132503 tggatttgagaattagggttagcatgtagaattgaatcgttggaagaagttggtaacctgatggattagggtgataaaggatgcttagattgtagattga 16132602  T
Q  234 tcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagat 333  Q
    ||||||||||||||   ||||||||||||||||||||||||||||| |||| ||||  |||||||||||||| ||||||||||||||||||| |||||||    
T  16132603 tcacagactaagttcataatcagttttggggtttgggtcgatggaagttggaatttaagcttgaaaagtcggagtctaaacgtttttgcaaacaagagat 16132702  T
Q  334 tatgtgagattt-ggaaatcgatttttggg 362  Q
    |||||||| ||| || ||||||||||||||    
T  16132703 tatgtgaggtttggggaatcgatttttggg 16132732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 58 - 347
Target Start/End: Original strand, 19443038 - 19443326
Alignment:
Q  58 aaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtag-ttgtttatgaatttgggaattagggttaga 156  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||||||||| |||||||||||  | |||||  ||| ||||||||||||||||||     
T  19443038 aaggtaagggtgagactaactttcaataattatagtgtatgtaaattctgaaattgatttaacatgagggttgttcttga-tttgggaattagggttagc 19443136  T
Q  157 atgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcag 256  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| || |||||||| ||||||||  | ||||||    
T  19443137 atgtagaattgaatcgttggaagaagtagataatctgatggattagggtgataaaggatgtttagattgtagtttaatcacggactaagtccctaatcag 19443236  T
Q  257 ttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||  || |||||| ||||||||||||||||||||||||| |||||    
T  19443237 ttttggggtttgggtcgatggaaattggagttttcgtttgaaaagtcgaagtataaacg-ttttgcaaataagagattatgtgaggtttgg 19443326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 135 - 384
Target Start/End: Complemental strand, 24267815 - 24267566
Alignment:
Q  135 gaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaat 234  Q
    ||||||| ||||||| ||||||| |||||||||||| |||||||||||||| | ||||||||| ||||||||||| ||||||||||||||| ||| ||||    
T  24267815 gaatttgagaattagagttagaacgtagaattgaattgttggaagaagtagatgatctgatgggttagggtgataaaggatgtttagattgtagaataat 24267716  T
Q  235 cacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagatt 334  Q
    ||||||||||||||| ||||||| |||||||||| |||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  24267715 cacagactaagtttccaatcagtattggggtttgagtcgatgggaattgggattttcgtttgaaaagtcggtgtctaaacg-ttttgcaaataagagatt 24267617  T
Q  335 atgtgagattt-ggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    ||||||| ||| |||||||||| ||||| ||||||||||| |||| |||||    
T  24267616 atgtgaggtttgggaaatcgatgtttggctggttgaaacttgaatttttct 24267566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 611906 - 611787
Alignment:
Q  4 gagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaat 103  Q
    |||||||| |||||||||||||  ||||||||||||||||||||| ||| |||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  611906 gagaagagccaagtgaagaaccagagagatcgtagagcttcgttcgtcaaaattaaggtaagggtgaggcaaactttcaataattatagtgtatgtaaat 611807  T
Q  104 tctgaaatggatttaacatg 123  Q
    |||||||| |||||||||||    
T  611806 tctgaaattgatttaacatg 611787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 283 - 384
Target Start/End: Original strand, 31468006 - 31468108
Alignment:
Q  283 gggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaaatcgatttttgggtggttgaaactcgaatctt 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| |||| ||    
T  31468006 gggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagtgattatgtgaggttctggaaatcgatttttgggtggttgaaacttgaatttt 31468105  T
Q  382 tct 384  Q
    |||    
T  31468106 tct 31468108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 251 - 384
Target Start/End: Original strand, 18259372 - 18259504
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaa 349  Q
    |||||||||||| ||| ||||  ||| ||||||||||||||||||||||||||||||| | |||| ||||||||||||| |||||||||| | |||||||    
T  18259372 aatcagttttggagtt-gggttaatgaaaattgggattttcgcttgaaaagtcggtgtttgaacg-ttttgcaaataagtgattatgtgaggttttggaa 18259469  T
Q  350 atcgatttttgggtggttgaaactcgaatctttct 384  Q
    |||||||||||||||||||||||| |||| |||||    
T  18259470 atcgatttttgggtggttgaaacttgaatttttct 18259504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 251 - 373
Target Start/End: Complemental strand, 28948427 - 28948303
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaa 349  Q
    ||||| ||||||||||||||| |||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||    
T  28948427 aatcaattttggggtttgggttgatgaaaattggaatttttgcttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggttttggaa 28948328  T
Q  350 atcgatttttggg-tggttgaaact 373  Q
    |  |||| ||||| |||||||||||    
T  28948327 aatgattcttgggatggttgaaact 28948303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 251 - 373
Target Start/End: Original strand, 16447971 - 16448094
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaa 349  Q
    |||||||||| | |||||| | ||||  |||| ||||||||||||||| |||||||||||||| |||||||||||| || |||||||||| | |||||||    
T  16447971 aatcagtttttgagtttggtttgatgataatttggattttcgcttgaagagtcggtgtctaaatgtttttgcaaatgagtgattatgtgaggttttggaa 16448070  T
Q  350 atcgatttttgggtggttgaaact 373  Q
    ||||||||||||||||||||||||    
T  16448071 atcgatttttgggtggttgaaact 16448094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 251 - 378
Target Start/End: Original strand, 19102679 - 19102807
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaa 349  Q
    |||||||||| | |||||  | |||| ||||||||||||||||||||| |||  ||||||||| |||||||||||| || |||||||||| | |||||||    
T  19102679 aatcagtttttgagtttgaattgatgaaaattgggattttcgcttgaagagtaagtgtctaaatgtttttgcaaatgagtgattatgtgaggttttggaa 19102778  T
Q  350 atcgatttttgggtggttgaaactcgaat 378  Q
    | |||||||||||||||||||||| ||||    
T  19102779 accgatttttgggtggttgaaactggaat 19102807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 262 - 373
Target Start/End: Original strand, 23532095 - 23532206
Alignment:
Q  262 gggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtg-agatttggaaatcgatttttg 360  Q
    |||||||||| |||||||| |||||||||| |||||| | |||||||||||||| ||||||||||||| ||||||||| || |||||||| |||||||||    
T  23532095 gggtttgggttgatggaaactgggattttcacttgaagattcggtgtctaaacg-ttttgcaaataagtgattatgtgaagttttggaaaccgatttttg 23532193  T
Q  361 ggtggttgaaact 373  Q
    ||||||| |||||    
T  23532194 ggtggtttaaact 23532206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 25618844 - 25618912
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtg 69  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  25618844 agggagaagagtcaagtgaagaaccggagagatcgtagagcttcgttcgtcagaattaaggtaagggtg 25618912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 381 - 548
Target Start/End: Complemental strand, 6124279 - 6124112
Alignment:
Q  381 ttctccttggaatctaacgccatcgacttattgagatctataaatgcaagaaggctgagaacattttttctacagcaaacaaattatcgagggactgctc 480  Q
    ||||| ||||||||||||||||| || || |||  ||| ||| |||||||  ||||| ||||  |||| || || |  |||||| ||||||| |||| ||    
T  6124279 ttctcattggaatctaacgccattgatttgttggcatcaatagatgcaagtcggctgcgaacgattttccttcaacggacaaatgatcgaggcactggtc 6124180  T
Q  481 ggatgacaagagagttgtctgttattttgagattcaaacgcttacgcgcattgaatttgtcccgttct 548  Q
    |||||||||||||| ||||| ||||||||| ||||||| |||||||  ||||||||||||||||||||    
T  6124179 ggatgacaagagagctgtctcttattttgacattcaaaagcttacgtacattgaatttgtcccgttct 6124112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 262 - 384
Target Start/End: Original strand, 8226939 - 8227061
Alignment:
Q  262 gggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcgatttttg 360  Q
    |||||||||| |||| ||| ||| ||||||||||||| | |||||||||||||| ||||||||||||| |||||||||| | |||||||| |||||||||    
T  8226939 gggtttgggttgatgaaaactggaattttcgcttgaagattcggtgtctaaacg-ttttgcaaataagtgattatgtgaggttttggaaaccgatttttg 8227037  T
Q  361 ggtggttgaaactcgaatctttct 384  Q
    ||||||| ||||| |||| |||||    
T  8227038 ggtggtttaaacttgaatttttct 8227061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 273 - 362
Target Start/End: Complemental strand, 20177827 - 20177737
Alignment:
Q  273 gatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgatttttggg 362  Q
    ||||||||||||||||||||||||||||||| | || | |||||||||||||||||| ||||||||||| ||| |||||||||||||||||    
T  20177827 gatggaaattgggattttcgcttgaaaagtcagagtttgaacgtttttgcaaataagggattatgtgaggtttgggaaatcgatttttggg 20177737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 273 - 362
Target Start/End: Original strand, 22158164 - 22158254
Alignment:
Q  273 gatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgatttttggg 362  Q
    ||||||||||||||||||||||||||||||| | || | |||||||||||||||||| ||||||||||| ||| |||||||||||||||||    
T  22158164 gatggaaattgggattttcgcttgaaaagtcagagtttgaacgtttttgcaaataagggattatgtgaggtttgggaaatcgatttttggg 22158254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 14978487 - 14978555
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtg 69  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  14978487 agggagaagagccaagtgaagaaccggagagatcgtagagcttcgttcgtcagaattaaggtaagggtg 14978555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 278 - 378
Target Start/End: Original strand, 5289300 - 5289398
Alignment:
Q  278 aaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaaatcgatttttgggtggttgaaactcga 376  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||   || ||| |||| ||| || |||||||||| |||||||||||||||||| ||    
T  5289300 aaatttggattttcgcttgaaaactcggtgtctaaacgtttttgca---aacagagtatgcgaggttctggaaatcgagttttgggtggttgaaacttga 5289396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 25753288 - 25753202
Alignment:
Q  254 cagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgag 341  Q
    ||||||||||||| | || |||| | ||| ||||||||| | ||||||| |||||||||||||||||||||||||| |||||||||||    
T  25753288 cagttttggggtt-gagttgatgaagattaggattttcgttcgaaaagttggtgtctaaacgtttttgcaaataagggattatgtgag 25753202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 25755458 - 25755372
Alignment:
Q  254 cagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgag 341  Q
    ||||||||||||| | || |||| | ||| ||||||||| | ||||||| |||||||||||||||||||||||||| |||||||||||    
T  25755458 cagttttggggtt-gagttgatgaagattaggattttcgttcgaaaagttggtgtctaaacgtttttgcaaataagggattatgtgag 25755372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 1640010 - 1639949
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggattta 118  Q
    |||||||||||||||||||||||||||| || ||||| ||| |||||||||| || ||||||    
T  1640010 taaggtaagggtgaggctaactctcaatgattatagtttatataaattctgatattgattta 1639949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 378
Target Start/End: Complemental strand, 19174991 - 19174895
Alignment:
Q  283 gggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcgatttttgggtggttgaaactcgaat 378  Q
    |||||||||| |||| |||||||||| ||| || ||||||||||||| |||||||||| | ||||||||  |||||| || || |||||||| ||||    
T  19174991 gggattttcgtttgagaagtcggtgtttaagcgcttttgcaaataagcgattatgtgaggttttggaaaatgattttgggatgcttgaaacttgaat 19174895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 292 - 347
Target Start/End: Complemental strand, 25348170 - 25348115
Alignment:
Q  292 gcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    ||||||||| |||| ||||||||||| |||||||||||||| |||||||| |||||    
T  25348170 gcttgaaaattcggagtctaaacgttcttgcaaataagagactatgtgagttttgg 25348115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 1254904 - 1254847
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||| |||||||| |  |||||||||||||||||||||||||||| || |||||    
T  1254904 gtagagctttgttcatca-atctaaggtaagggtgaggctaactctcaatgattatagt 1254847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 4477916 - 4477878
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcata 91  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  4477916 gaattaaggtaagggtgagactatctctcaataatcata 4477878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 7430667 - 7430617
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaata 85  Q
    ||||||||| ||||||| |||||||||||||||||||| | ||| ||||||    
T  7430667 gtagagctttgttcatctgaattaaggtaagggtgaggtttactttcaata 7430617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 283 - 341
Target Start/End: Complemental strand, 16136115 - 16136057
Alignment:
Q  283 gggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgag 341  Q
    ||||||||||  ||| |||||||||| ||| | |||||||||||||| |||||||||||    
T  16136115 gggattttcgtgtgagaagtcggtgtttaagcatttttgcaaataagcgattatgtgag 16136057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 23839265 - 23839219
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcata 91  Q
    |||||||  |||||||||||||||||| ||| |||||||||||||||    
T  23839265 gttcatctaaattaaggtaagggtgagactatctctcaataatcata 23839219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 25397232 - 25397194
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcata 91  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  25397232 gaattaaggtaagggtgaggctaactctcgatgatcata 25397194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 1408 - 1368
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    |||||||||||||||||||| ||||||||||| || |||||    
T  1408 gaattaaggtaagggtgaggttaactctcaatgattatagt 1368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 8367 - 8327
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    |||||||||||||||||||| ||||||||||| || |||||    
T  8367 gaattaaggtaagggtgaggttaactctcaatgattatagt 8327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 23620204 - 23620254
Alignment:
Q  33 tcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaata 85  Q
    ||||||||||| |||||||| | | ||||||||||||||||||||||||||||    
T  23620204 tcgtagagctt-gttcatca-attcaaggtaagggtgaggctaactctcaata 23620254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 25348546 - 25348506
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||||||||||||| ||| ||||||||||| |||||    
T  25348546 gaattaaggtaagggtgagactatctctcaataataatagt 25348506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 1 - 384
Target Start/End: Complemental strand, 7783 - 7399
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgta 100  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7783 agggagaagagccaagtgaagaaccggagagattgtagagcttcgttcgtcagaattaaggtaagggtgaggctaactctcaataatcatattgtatgta 7684  T
Q  101 aattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggatt 200  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7683 aattctgaaattaatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggatt 7584  T
Q  201 agggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaa 300  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  7583 agggtgataaaggatgtttagattgcagattaatcacacactaagtttccaatcagttttagggtttgggtcgatggaaattggaatttacgcttgaaaa 7484  T
Q  301 gtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||| |||||    
T  7483 gtcggagtctaaacgtttttgcaaataagagattatgtgaggtttgggaaatcgatttttgggtggttgaaacttgaatttttct 7399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 369
Target Start/End: Original strand, 40554462 - 40554831
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgta 100  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  40554462 agggagaagagccaagtgaagaaccggagagatcgtagagcttcgtttgtcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgaa 40554561  T
Q  101 aattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggatt 200  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  40554562 aattctgaaattgatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaattgttggaagaagtaggtaatctgatggatt 40554661  T
Q  201 agggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaa 300  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||| |||||||||||| ||||  |||||||||    
T  40554662 agggtgatagaggatgtttagattgcagattaatcacggactaagttcccaatcagttttggggtttgggttgatggaaattggaatttatgcttgaaaa 40554761  T
Q  301 gtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgatttttgggtggttga 369  Q
    ||||| || |||||||||||||||| ||||||||||||||| ||| ||||||||||||| ||||||||||    
T  40554762 gtcggagtttaaacgtttttgcaaacaagagattatgtgaggtttgggaaatcgattttggggtggttga 40554831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 57 - 369
Target Start/End: Original strand, 8756151 - 8756463
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttaga 156  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||||||    
T  8756151 taaggtaagggcgatgctaactctcaataatcatagtgtatgtaaattctgaaattaatttaacatgtagttgtttatgaatt-gggaattagcgttaga 8756249  T
Q  157 atgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcag 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||| | ||||||    
T  8756250 atgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgataaaggatgtttagattgcagattaatctcggactaagttcccaatcag 8756349  T
Q  257 ttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgat 355  Q
    ||||||| |||||||||||||||||||  ||||  |||||||||||||| ||||||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  8756350 ttttgggttttgggtcgatggaaattgtaatttatgcttgaaaagtcggagtctaaacgtttttgcaaacaagagattatgtgaggtttgggaaatcgat 8756449  T
Q  356 ttttgggtggttga 369  Q
    ||| ||||||||||    
T  8756450 tttggggtggttga 8756463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 35 - 329
Target Start/End: Original strand, 8249229 - 8249520
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttat 134  Q
    ||||||||| |||||||||  | |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||| ||    
T  8249229 gtagagctttgttcatcagt-tcaaggtaagggtgaggctaactctcaataatcatagtgtatgtgaattctgaaattgatttaacatgtggttgtt-at 8249326  T
Q  135 gaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaat 234  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  8249327 gaatttgggaattagggttagaatgtagaattgaattgttgaaagaagtagataatctgatggattagggtgataaaggatgtttagattgtagattaat 8249426  T
Q  235 cacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataag 329  Q
    ||||||||||||||| ||||||| |||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  8249427 cacagactaagtttccaatcagtattggagtttgagtcgatggaaattgggattttcgtttgaaaagtcggtgtctaaacg-ttttgcaaataag 8249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 35 - 341
Target Start/End: Complemental strand, 48744601 - 48744297
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttat 134  Q
    ||||||||| ||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  48744601 gtagagctttgttcatc-gattcaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaattgatttaacatgtagttgtttat 48744503  T
Q  135 gaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaat 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  48744502 gaatttgggaattagggttagaatgtagaattgaatcgttggaagtagtaggtaatctgatggattagggtgataaaggatgtttagattgtagattaat 48744403  T
Q  235 cacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagatt 334  Q
    ||||||||||||||  |||||| |||||| ||| |||  ||| |||||||  |||  |||||||||||||| ||||||||||| |||||||||||||| |    
T  48744402 cacagactaagtttaaaatcag-tttgggatttcggttcatgaaaattggagtttatgcttgaaaagtcggagtctaaacgttcttgcaaataagagact 48744304  T
Q  335 atgtgag 341  Q
    |||||||    
T  48744303 atgtgag 48744297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 35 - 350
Target Start/End: Complemental strand, 13898543 - 13898230
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtag-ttgttta 133  Q
    ||||||||| |||||||| | ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||||  | |||||      
T  13898543 gtagagctttgttcatca-atttaaggtaagggtgaggctaactttcaataattatagtgtatgtaaattctgaaattcatttaacatgagggttgttct 13898445  T
Q  134 tgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaa 233  Q
    ||| |||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  13898444 tga-tttgagaattagggttagcatgtagaattgaatcgttggaagaagtagataatctgatggattagggtgataaaggatgtttagattgtagattaa 13898346  T
Q  234 tcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagat 333  Q
    || | ||||||||    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||  || |||||| |||||||||||||||||    
T  13898345 tctcggactaagtccttaatcagttttggggtttgggtcgatggaaattggagttttcgtttgaaaagtcgaagtataaacg-ttttgcaaataagagat 13898247  T
Q  334 tatgtgagatttggaaa 350  Q
    |||||||| ||||||||    
T  13898246 tatgtgaggtttggaaa 13898230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 139 - 287
Target Start/End: Original strand, 5295764 - 5295912
Alignment:
Q  139 ttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcaca 238  Q
    |||||||||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  5295764 ttgggaattagggttagaatgtagaattgaattgtggaaagaagtagataatctgatggattagggtgataaaggatgtttagattgtagattaatcaca 5295863  T
Q  239 gactaagtttcgaatcagttttggggtttgggtcgatggaaattgggat 287  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||    
T  5295864 gactaagtttccaatcagtcttggggtttgagtcgatggaaattgggat 5295912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 139 - 287
Target Start/End: Original strand, 5296937 - 5297085
Alignment:
Q  139 ttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcaca 238  Q
    |||||||||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  5296937 ttgggaattagggttagaatgtagaattgaattgtggaaagaagtagataatctgatggattagggtgataaaggatgtttagattgtagattaatcaca 5297036  T
Q  239 gactaagtttcgaatcagttttggggtttgggtcgatggaaattgggat 287  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||    
T  5297037 gactaagtttccaatcagtcttggggtttgagtcgatggaaattgggat 5297085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 5294591 - 5294735
Alignment:
Q  139 ttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcaca 238  Q
    |||||||||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  5294591 ttgggaattagggttagaatgtagaattgaattgtggaaagaagtagataatctgatggattagggtgataaaggatgtttagattgtagattaatcaca 5294690  T
Q  239 gactaagtttcgaatcagttttggggtttgggtcgatggaaattg 283  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||    
T  5294691 gactaagtttccaatcagtattggggtttgagtcgatggaaattg 5294735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 254 - 384
Target Start/End: Complemental strand, 11054562 - 11054431
Alignment:
Q  254 cagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttggaaatcg 353  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  11054562 cagttttggggtt-gggttgatgaaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggtttggaaatcg 11054464  T
Q  354 at--ttttgggtggttgaaactcgaatctttct 384  Q
    ||  |||||||||||||||||| |||| |||||    
T  11054463 atttttttgggtggttgaaacttgaatttttct 11054431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 4326198 - 4326083
Alignment:
Q  8 agagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctg 107  Q
    |||| |||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||||| || ||||| |||||||||||||||||||    
T  4326198 agagccaagtgaagaaccggagagattgtagagcttcgttcgttagaattaaggtaagggtgaggctaactttcgataattatagtgtatgtaaattctg 4326099  T
Q  108 aaatggatttaacatg 123  Q
    |||| |||||||||||    
T  4326098 aaattgatttaacatg 4326083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 258 - 384
Target Start/End: Complemental strand, 13256539 - 13256413
Alignment:
Q  258 tttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaaatcgatt 356  Q
    |||||| ||||||| |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||| || ||||||||||||    
T  13256539 tttgggatttgggttgatgaaaattgggattttcgcttgaaaactcggtgtctaaacg-ttttgcaaataagtgattatgtgaggttctggaaatcgatt 13256441  T
Q  357 tttgggtggttgaaactcgaatctttct 384  Q
    ||| ||||||||||||| |||| |||||    
T  13256440 ttttggtggttgaaacttgaatttttct 13256413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 254 - 384
Target Start/End: Original strand, 19486165 - 19486295
Alignment:
Q  254 cagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatc 352  Q
    ||||||| |||||||| | |||| ||||||||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||| | |||||||| |    
T  19486165 cagtttttgggtttggtt-gatgaaaattgggattttcgcttgaatagtcggcgtctaaacgtttctgcaaataagtgattatgtgaggttttggaaacc 19486263  T
Q  353 gatttttgggtggttgaaactcgaatctttct 384  Q
    ||||||||||||||| ||||| |||| |||||    
T  19486264 gatttttgggtggtttaaacttgaatttttct 19486295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 255 - 384
Target Start/End: Complemental strand, 48274332 - 48274202
Alignment:
Q  255 agttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcg 353  Q
    |||||| | |||||| | |||| ||||||||||||||||||||| ||||||||||||||  ||||||||||| || |||||||||| | |||||||| ||    
T  48274332 agtttttgagtttggattgatgaaaattgggattttcgcttgaagagtcggtgtctaaatatttttgcaaatgagtgattatgtgaggttttggaaaccg 48274233  T
Q  354 atttttgggtggttgaaactcgaatctttct 384  Q
    |||||||||||||||||||| |||| |||||    
T  48274232 atttttgggtggttgaaactggaatttttct 48274202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 39431139 - 39431252
Alignment:
Q  13 caagtgaagaaccgaagagatcgtagagct---tcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaa 109  Q
    |||||||||||||  |||||| ||||||||   | |||||||  ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  39431139 caagtgaagaacccgagagattgtagagctaatttgttcatctaaattaaggtaagggtgaggctaactttcaataattatagtgtatgtaaattctgaa 39431238  T
Q  110 atggatttaacatg 123  Q
    || |||||||||||    
T  39431239 attgatttaacatg 39431252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 44190174 - 44190281
Alignment:
Q  16 gtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggat 115  Q
    ||||||||||| |||||| ||||||||| |||| ||  ||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||  ||    
T  44190174 gtgaagaaccggagagattgtagagctttgttcgtctaaattaaggtaatggtgaggctaactttcaataattatagtgtatgtaaattctgaaattaat 44190273  T
Q  116 ttaacatg 123  Q
    ||||||||    
T  44190274 ttaacatg 44190281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 254 - 347
Target Start/End: Original strand, 13698841 - 13698933
Alignment:
Q  254 cagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    ||||||||||||| | || |||| | ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||    
T  13698841 cagttttggggtt-gagttgatgaagattgggattttcgcttgaaaagtaggtgtctaaacgtttttgcaaataagggattatgtgaggtttgg 13698933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 23556418 - 23556331
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatg 123  Q
    ||||||||| |||||||| |  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||    
T  23556418 gtagagctttgttcatca-atctaaggtaagggtgaggctaactttcaataattatagtgtatgtaaattctgaaattgatttaacatg 23556331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 13864365 - 13864432
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaaca 121  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  13864365 aattaaggtaagggtgaggctaactttcaataattatagtgtatgtaaattctgaaattgatttaaca 13864432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 33002014 - 33001920
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    ||||| ||||||||||||||| |||| |||||||||||||| ||| ||||||||  |||||||||||||| |||||||| ||||||||||| |||||    
T  33002014 aatcaattttggggtttgggttgatgaaaattgggattttctcttaaaaagtcg--gtctaaacgtttttacaaataagggattatgtgaggtttgg 33001920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 14274386 - 14274318
Alignment:
Q  56 ttaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgt 124  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||| ||||||||||||    
T  14274386 ttaaggtaagggtgagactaactttcaataattatagtgtatgtaaattctgaaattgatttaacatgt 14274318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 278 - 371
Target Start/End: Original strand, 17467609 - 17467700
Alignment:
Q  278 aaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaaatcgatttttgggtggttgaaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||   || ||| |||||||| || |||||||||| ||||||||||||||||    
T  17467609 aaattgggattttcgcttgaaaactcggtgtctaaacgtttttgca---aacagagtatgtgaggttctggaaatcgagttttgggtggttgaaa 17467700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 17585605 - 17585514
Alignment:
Q  278 aaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaaatcgatttttgggtggttgaaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||   || ||| |||||||| || |||||||||| ||||||||||||||||    
T  17585605 aaattgggattttcgcttgaaaactcggtgtctaaacgtttttgca---aacagagtatgtgaggttctggaaatcgagttttgggtggttgaaa 17585514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 23557607 - 23557520
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatg 123  Q
    ||||||||| |||||||| |  |||||||||||||||||||||| |||||||| ||||||||| ||||||||||||| |||||||||||    
T  23557607 gtagagctttgttcatca-atctaaggtaagggtgaggctaactttcaataattatagtgtatttaaattctgaaattgatttaacatg 23557520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 23461589 - 23461664
Alignment:
Q  13 caagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatc 88  Q
    |||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||| |||||  |||||||||    
T  23461589 caagtgaagaaccggaaagatcgtagagcttcgttcatctaaattaaggtaagggtgagactaacattcaataatc 23461664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 346
Target Start/End: Complemental strand, 29004923 - 29004831
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttg 346  Q
    |||||||||||||||| ||||  ||| |||||| ||||||  |||||||||||||||||||||||  ||||||||||||||| |||||||| ||||    
T  29004923 aatcagttttggggtt-gggttaatgaaaattgagatttttccttgaaaagtcggtgtctaaacg--tttgcaaataagagactatgtgaggtttg 29004831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 251 - 373
Target Start/End: Original strand, 3288958 - 3289078
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaa 349  Q
    |||||||||||||||| | ||  ||| ||||||| ||||  | |||||||||||||||| || |||||| ||||||||| ||||||||||| || || ||    
T  3288958 aatcagttttggggtt-gtgttaatgaaaattggaatttatgtttgaaaagtcggtgtccaa-cgtttt-gcaaataagtgattatgtgaggttctgaaa 3289054  T
Q  350 atcgatttttgggtggttgaaact 373  Q
    ||||||||||||||||||||||||    
T  3289055 atcgatttttgggtggttgaaact 3289078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 350
Target Start/End: Original strand, 10063122 - 10063199
Alignment:
Q  273 gatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttggaaa 350  Q
    |||| |||||| |||||||||||||| ||||| |||||||| |||||||||||| || ||||||||||| ||| ||||    
T  10063122 gatgaaaattgagattttcgcttgaagagtcgatgtctaaatgtttttgcaaatgagtgattatgtgaggttttgaaa 10063199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 37380706 - 37380615
Alignment:
Q  278 aaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaaatcgatttttgggtggttgaaa 371  Q
    |||||||||| || ||||||||| ||||||||| ||||||||||||   || ||| |||||||| || |||||||||| ||||||||||||||||    
T  37380706 aaattgggatctttgcttgaaaactcggtgtctcaacgtttttgca---aacagagtatgtgaggttctggaaatcgagttttgggtggttgaaa 37380615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 16463121 - 16463056
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatg 123  Q
    ||||||||||||| |||||||| |||||||| ||||||||| |||||||| |||| |||||||||||    
T  16463121 taaggtaagggtgcggctaactttcaataattatagtgtat-taaattcttaaattgatttaacatg 16463056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 378
Target Start/End: Original strand, 21734057 - 21734182
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttc-gcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-gga 348  Q
    |||||||||||||||| ||||  ||| |||||||||||||  | ||||||||| |||||| || |||||| ||||||||||||| ||||||| ||| |||    
T  21734057 aatcagttttggggtt-gggttaatgaaaattgggattttatgtttgaaaagttggtgtccaa-cgtttt-gcaaataagagatcatgtgagttttggga 21734153  T
Q  349 aatcgatttttgggtggttgaaactcgaat 378  Q
    |||||| |||||| ||||||||||| ||||    
T  21734154 aatcga-ttttggttggttgaaacttgaat 21734182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 378
Target Start/End: Original strand, 21734616 - 21734741
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttc-gcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-gga 348  Q
    |||||||||||||||| ||||  ||| |||||||||||||  | ||||||||| |||||| || |||||| ||||||||||||| ||||||| ||| |||    
T  21734616 aatcagttttggggtt-gggttaatgaaaattgggattttatgtttgaaaagttggtgtccaa-cgtttt-gcaaataagagatcatgtgagttttggga 21734712  T
Q  349 aatcgatttttgggtggttgaaactcgaat 378  Q
    |||||| |||||| ||||||||||| ||||    
T  21734713 aatcga-ttttggttggttgaaacttgaat 21734741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 3288756 - 3288833
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaat--ggatttaacatgtagttgtt 131  Q
    ||||||||||||||||||||||||  ||| |||||||||||||  ||||||||||| |   |||||||||||| ||||||    
T  3288756 aattaaggtaagggtgaggctaacattcagtaatcatagtgta--taaattctgaatttgtgatttaacatgttgttgtt 3288833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 21733855 - 21733908
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaa 109  Q
    ||||||||||||||||||||||||  ||| |||||||||||||  |||||||||||    
T  21733855 aattaaggtaagggtgaggctaacattcagtaatcatagtgta--taaattctgaa 21733908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 21734414 - 21734467
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaa 109  Q
    ||||||||||||||||||||||||  ||| |||||||||||||  |||||||||||    
T  21734414 aattaaggtaagggtgaggctaacattcagtaatcatagtgta--taaattctgaa 21734467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 4994424 - 4994381
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaact 78  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||    
T  4994424 gtagggctttgttcatctgaattaaggtaagggtgaggctaact 4994381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 11311117 - 11311074
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcatagtgta 96  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||||    
T  11311117 gaattaaggtaagggtgagactatctctcaataataatagtgta 11311074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 831622 - 831664
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataat 87  Q
    |||||||| || ||||||||||||||| |||||||||||||||    
T  831622 gttcatcaaaactaaggtaagggtgagactaactctcaataat 831664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 1196802 - 1196844
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataat 87  Q
    |||||||| || ||||||||||||||| |||||||||||||||    
T  1196802 gttcatcaaaactaaggtaagggtgagactaactctcaataat 1196844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 11382867 - 11382905
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcata 91  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  11382867 gaattaaggtaagggtgagactatctctcaataatcata 11382905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 11389344 - 11389382
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcata 91  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  11389344 gaattaaggtaagggtgagactatctctcaataatcata 11389382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 11662169 - 11662083
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaat--ggatttaacatgtagttgtt 131  Q
    |||||||| || |||||||||||||||||||||  ||| |||| ||||||||  ||||||||||| |   |||||||||||| ||||||    
T  11662169 gttcatcaaaactaaggtaagggtgaggctaacattcagtaattatagtgta--taaattctgaatttgtgatttaacatgttgttgtt 11662083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 131
Target Start/End: Original strand, 14188294 - 14188368
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaa--atggatttaacatgtagttgtt 131  Q
    |||||||||||||||||||||  ||| |||||||||||||  |||||||||||   | |||||||||||| ||||||    
T  14188294 taaggtaagggtgaggctaacattcagtaatcatagtgta--taaattctgaatttttgatttaacatgttgttgtt 14188368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 131
Target Start/End: Original strand, 14190892 - 14190966
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaa--atggatttaacatgtagttgtt 131  Q
    |||||||||||||||||||||  ||| |||||||||||||  |||||||||||   | |||||||||||| ||||||    
T  14190892 taaggtaagggtgaggctaacattcagtaatcatagtgta--taaattctgaatttttgatttaacatgttgttgtt 14190966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 16009635 - 16009597
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcata 91  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  16009635 gaattaaggtaagggtgagactatctctcaataatcata 16009597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 34958625 - 34958583
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataat 87  Q
    |||||||| || ||||||||||||||| |||||||||||||||    
T  34958625 gttcatcaaaactaaggtaagggtgagactaactctcaataat 34958583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 38829205 - 38829155
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaata 85  Q
    ||||||||| ||||||| |||||||||||||||||||| | ||| ||||||    
T  38829205 gtagagctttgttcatctgaattaaggtaagggtgaggtttactttcaata 38829155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 16574315 - 16574267
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaat 84  Q
    ||||||||| |||||||| |  ||||||||||||||||||||||||||||    
T  16574315 gtagagctttgttcatca-atctaaggtaagggtgaggctaactctcaat 16574267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 16591347 - 16591395
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaat 84  Q
    ||||||||| |||||||| |  ||||||||||||||||||||||||||||    
T  16591347 gtagagctttgttcatca-atctaaggtaagggtgaggctaactctcaat 16591395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 13256743 - 13256707
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagt 93  Q
    |||||||||||||||||||||||||||| || |||||    
T  13256743 taaggtaagggtgaggctaactctcaatgattatagt 13256707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 21230960 - 21230996
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  21230960 taaggtaagggtgagactatctctcaataatcatagt 21230996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 33002161 - 33002105
Alignment:
Q  102 attctgaaat-ggatttaacatgtagttgtttatgaatttgggaattagggttagaa 157  Q
    |||||||||| |||||||||| || || ||||  |||||||||||||||||||||||    
T  33002161 attctgaaattggatttaacaggttgtagtttgggaatttgggaattagggttagaa 33002105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 39994836 - 39994892
Alignment:
Q  37 agagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||| |||||||| ||| ||||||| |||||| |||||||||||| || |||||    
T  39994836 agagctttgttcatcaaaatcaaggtaaaggtgagactaactctcaatgataatagt 39994892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 283; Significance: 1e-158; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 14819188 - 14818806
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgta 100  Q
    ||||||||| | |||||||||||||| |||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  14819188 agggagaagtgccaagtgaagaaccggagagatcgtagatcttcgttcgttagaattaaggtaagggtgaggctaactctcaataatcaaagtgtatata 14819089  T
Q  101 aattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggatt 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14819088 aattctgaaatagatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcattggaagaagtaggtaatctgatggatt 14818989  T
Q  201 agggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaa 300  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||| ||||  |||||||||    
T  14818988 agggtgataaaggatgtttagattgcagattaatcacagactaagttcccaatcaattttggggtttgggtcgatggaaattggaatttatgcttgaaaa 14818889  T
Q  301 gtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgatttttgggtggttgaaactcgaatcttt 382  Q
    ||||| ||||||| ||||||||||||||||||||||||||| ||| |||||| |||||| |||||||||||||| ||||||||    
T  14818888 gtcggagtctaaatgtttttgcaaataagagattatgtgaggtttgggaaatagattttggggtggttgaaacttgaatcttt 14818806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 3393699 - 3394057
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgta 100  Q
    ||||||||||| |||||||||||||| ||||||| ||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3393699 agggagaagagccaagtgaagaaccggagagatcatagagcttcgttcgtcggaattaaggtaagggtgaggctaactcccaataatcatagtgtatgta 3393798  T
Q  101 aattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggatt 200  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3393799 aattctgaaattgatttaacatgtagttatttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatttgatggatt 3393898  T
Q  201 agggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaa 300  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||| ||||  |||||||||    
T  3393899 agggtgataaaggatgtttagattgcagattaatcacggactaagttcccaatcaattttggggtttgggtcgatggaaattggaatttatgcttgaaaa 3393998  T
Q  301 gtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgatttt 358  Q
    ||| | ||||||||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  3393999 gtcagagtctaaacgtttttgcaaacaagagattatgtgaggtttgggaaatcgatttt 3394057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 4 - 378
Target Start/End: Original strand, 52337903 - 52338276
Alignment:
Q  4 gagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaat 103  Q
    |||||||| ||||| |||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  52337903 gagaagagccaagtaaagaaccggagagatcgtagagattcattcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtgaat 52338002  T
Q  104 tctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagg 203  Q
    |||||||| |||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||| || | ||||||||| |||||||||||||||||    
T  52338003 tctgaaattgatttaacatgtggttgtt-atgaatttgggaattagggttagaatatagaattgaattgtggaaagaagtagataatctgatggattagg 52338101  T
Q  204 gtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtc 303  Q
    || ||| ||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||||||||    
T  52338102 gttataaaggatgtttagattgtagattaatcacagactaagtttcaaatcagtattggggtttgagtcgatggaaattgggattttcgtttgaaaagtc 52338201  T
Q  304 ggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcgatttttgggtggttgaaactcgaat 378  Q
    |||||||||||| ||||||||||||| |||| ||||| | |||||| ||||||||||||| |||| ||||| ||||    
T  52338202 ggtgtctaaacg-ttttgcaaataagtgattgtgtgaggttttggagatcgatttttgggcggttaaaacttgaat 52338276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 35 - 384
Target Start/End: Original strand, 52212411 - 52212760
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttat 134  Q
    ||||||||| |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  52212411 gtagagctttgttcatca-atctaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaattgatttaacatatagttgtttat 52212509  T
Q  135 gaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaat 234  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||    
T  52212510 gaatttaggaattagggttagaatttagaattgaattgttggaagaagtaggtaatctgatggattagggtgataaaggatgtttagatttcaaattaat 52212609  T
Q  235 cacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagatt 334  Q
    |||| ||| |||||| ||||| ||||||||||| |||||||||||||||| |||| ||||||||||||||| || ||||| |||||||||||||||||||    
T  52212610 cacaaacttagtttccaatcaattttggggttttggtcgatggaaattggaatttacgcttgaaaagtcggagtgtaaacatttttgcaaataagagatt 52212709  T
Q  335 atgtga-gatttggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    |||||| | || ||||||||||||| |||||||||||||| ||||||||||    
T  52212710 atgtgaggcttgggaaatcgattttggggtggttgaaacttgaatctttct 52212760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 57 - 358
Target Start/End: Original strand, 18366515 - 18366817
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttaga 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  18366515 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaattgatttaacatgtagttgtttatgaatttgagaattagggttaga 18366614  T
Q  157 atgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcag 256  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||    
T  18366615 atgtagaattgaatcattggaagaagtaggtaatctgatggattagggtgataaaggatgtttagattgcagattaatcacagactaagttcccaatcag 18366714  T
Q  257 ttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgat 355  Q
    || ||| |||||||||||||||| |||| ||||  | |||||||||||| ||||||||||||||||||| | ||||||||||||| ||| ||||||||||    
T  18366715 ttatggagtttgggtcgatggaagttggaatttatgattgaaaagtcggagtctaaacgtttttgcaaacatgagattatgtgaggtttgggaaatcgat 18366814  T
Q  356 ttt 358  Q
    |||    
T  18366815 ttt 18366817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 57 - 369
Target Start/End: Complemental strand, 12276848 - 12276533
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtat--gtaaattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggtta 154  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12276848 taaggtaagggtgatgctaactctcaataatcatagtgtatatgtaaattctgaaattgatttaacatgtagttgtttatgaatttgggaattagggtta 12276749  T
Q  155 gaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatc 254  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| | ||||    
T  12276748 gaatgtagaattgaatcgttagaagaagtaggtaatctgatggattaggatgataaaggatgtttagattgcagattaatcacggactaagttcccaatc 12276649  T
Q  255 agttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcg 353  Q
    ||||||||||||||||||||||||| |||| | ||  ||||||||| |||| ||||||||||||||||||| |||||||||| |||| ||| ||||||||    
T  12276648 agttttggggtttgggtcgatggaagttggaaattatgcttgaaaaatcggagtctaaacgtttttgcaaacaagagattatctgaggtttgggaaatcg 12276549  T
Q  354 atttttgggtggttga 369  Q
    ||||| ||||||||||    
T  12276548 attttggggtggttga 12276533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 35 - 347
Target Start/End: Original strand, 178460 - 178773
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcata-gtgtatgtaaattctgaaatggatttaacatgtagttgttta 133  Q
    ||||||||| |||||||||  | ||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| |||||||||||||||||||||    
T  178460 gtagagctttgttcatcagt-tcaaggtaagggtgaggctaactttcaataattataagtgtatgtaaattctgaaattgatttaacatgtagttgttta 178558  T
Q  134 tgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaa 233  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||| |||||||    
T  178559 tgaatttgggaattagggttagcatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgataagggatgcttagattgtagattaa 178658  T
Q  234 tcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgg-gattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagaga 332  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||||  ||||  | ||||| |||||| ||||||||||||||||||||||||||    
T  178659 tcacggactaagttcccaatcagttttggggtttgggtcgatggaaattggaaatttatgtttgaagagtcggagtctaaacgtttttgcaaataagaga 178758  T
Q  333 ttatgtgagatttgg 347  Q
    ||||||||| |||||    
T  178759 ttatgtgaggtttgg 178773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 139 - 382
Target Start/End: Original strand, 24340029 - 24340272
Alignment:
Q  139 ttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcaca 238  Q
    |||||||||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  24340029 ttgggaattagggttagaatgtagaattgaattgtggaaagaagtagataatctgatggattagggtgataaaggatgtttagattgtagattaatcaca 24340128  T
Q  239 gactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgt 338  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||||| | ||||| |||||||||||||||| ||||||||||||||||||||||    
T  24340129 gactaagtttccaatcagtattggggtttgagtcgatggaaattgggatttttgtttgaatagtcggtgtctaaacg-ttttgcaaataagagattatgt 24340227  T
Q  339 gagattt-ggaaatcgatttttgggtggttgaaactcgaatcttt 382  Q
    ||| ||| |||||||||||||||||||||||||||| ||||||||    
T  24340228 gaggtttgggaaatcgatttttgggtggttgaaacttgaatcttt 24340272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 61 - 347
Target Start/End: Original strand, 13029167 - 13029452
Alignment:
Q  61 gtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtag-ttgtttatgaatttgggaattagggttagaatg 159  Q
    |||||||||||||||||| |||||||| |||||||| ||||| |||||||| |||||||||||  | |||||  ||| |||||||||||||||||| |||    
T  13029167 gtaagggtgaggctaactttcaataattatagtgtacgtaaactctgaaattgatttaacatgagggttgttcttga-tttgggaattagggttagcatg 13029265  T
Q  160 tagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttt 259  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||  ||||||||  | |||||||||    
T  13029266 tagaattgaatcgttggaagaagtagataatctgatggattagggtgataaaggatgtttagattgtagattaatcatggactaagtccctaatcagttt 13029365  T
Q  260 tggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    ||||||||||||| |||||||||||  |||||| |||||||||||  || |||||| ||||||||||||||||||||||||| |||||    
T  13029366 tggggtttgggtcaatggaaattggagttttcgtttgaaaagtcgaagtataaacg-ttttgcaaataagagattatgtgaggtttgg 13029452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 35 - 347
Target Start/End: Original strand, 13025550 - 13025860
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtag-ttgttta 133  Q
    ||||||||| |||||||| | | || |||||||||||||||||| |||||||| |||||||| ||||| |||||||| |||||||||||  | |||||      
T  13025550 gtagagctttgttcatca-attcaaagtaagggtgaggctaactttcaataattatagtgtacgtaaactctgaaattgatttaacatgagggttgttct 13025648  T
Q  134 tgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaa 233  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  13025649 tga-tttgggaattagggttagcatgtagaattgaatcgttggaagaagtagataatctgatggattagggtgataaaggatgtttagattgtagattaa 13025747  T
Q  234 tcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagat 333  Q
    |||  ||||||||  | |||||||||||||||||||||| |||||||||||  |||||| |||||||||||  || |||||| |||||||||||||||||    
T  13025748 tcatggactaagtccctaatcagttttggggtttgggtcaatggaaattggagttttcgtttgaaaagtcgaagtataaacg-ttttgcaaataagagat 13025846  T
Q  334 tatgtgagatttgg 347  Q
    ||| |||| |||||    
T  13025847 tatttgaggtttgg 13025860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 146 - 384
Target Start/End: Complemental strand, 12159244 - 12159001
Alignment:
Q  146 ttagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaag 245  Q
    ||||||||||||||||||||| ||| || | ||||||||| | ||||||||||||||||||||| ||||| ||||||||| ||| ||||||||||||| |    
T  12159244 ttagggttagaatgtagaattaaattgtggaaagaagtagattatctgatggattagggtgataaaggatatttagattgtagaataatcacagactagg 12159145  T
Q  246 tttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt 345  Q
    |||| ||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||| |||    
T  12159144 tttccaatcagtattggggtttgagccgatggaaattgggattttcgtttgaaaagtcggtgtctaaacg-ttttgcaaataagagattatctgaggttt 12159046  T
Q  346 -ggaaatcga-----tttttgggtggttgaaactcgaatctttct 384  Q
     |||||||||     ||||||||||||||||||| |||| |||||    
T  12159045 gggaaatcgattttttttttgggtggttgaaacttgaatttttct 12159001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 146 - 384
Target Start/End: Complemental strand, 13512026 - 13511785
Alignment:
Q  146 ttagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaag 245  Q
    |||||||||||| |||||||||||| || | ||||||||| | |||| |||||||||||||||| ||||||||||||||| ||| |||||||||||||||    
T  13512026 ttagggttagaaagtagaattgaattgtggaaagaagtagatgatctaatggattagggtgataaaggatgtttagattgtagaataatcacagactaag 13511927  T
Q  246 tttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt 345  Q
    |||| ||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||| ||||||| |||    
T  13511926 tttccaatcagtattggggtttgagccgatggaaattgggattttcgtttgaaaagtcggtgtctaaacg-ttttgcaaataagcgataatgtgaggttt 13511828  T
Q  346 -ggaaatcga---tttttgggtggttgaaactcgaatctttct 384  Q
     |||||| ||   ||||||||||||||||||| |||| |||||    
T  13511827 gggaaatagattttttttgggtggttgaaacttgaatttttct 13511785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 57 - 185
Target Start/End: Original strand, 23392820 - 23392948
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttaga 156  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23392820 taaggtaagggtgagactaactctcaataatcatagtgtatgtaaactctgaaattgatttaacatgtagttgtttatgaatttgggaattagggttaga 23392919  T
Q  157 atgtagaattgaatcgttggaagaagtag 185  Q
    |||||||||||||| || | |||||||||    
T  23392920 atgtagaattgaattgtggaaagaagtag 23392948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 204 - 384
Target Start/End: Original strand, 17547620 - 17547798
Alignment:
Q  204 gtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtc 303  Q
    |||||| ||||||||||||||| |||||||||| || ||||  ||| |||||||||||||||| ||||  |||||||||||||||||| |||||||||||    
T  17547620 gtgataaaggatgtttagattgtagattaatcatagtctaatgttccaatcagttttggggtt-gggttaatggaaattgggattttcccttgaaaagtc 17547718  T
Q  304 ggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
     |||||||||||  |||||||||||| |||||||||| | ||||||||||||||||||||||||||||||| |||| |||||    
T  17547719 agtgtctaaacg--tttgcaaataagcgattatgtgaggttttggaaatcgatttttgggtggttgaaacttgaatttttct 17547798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 246 - 384
Target Start/End: Complemental strand, 12536511 - 12536372
Alignment:
Q  246 tttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt- 344  Q
    |||| |||||||||| |||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||     
T  12536511 tttccaatcagtttttgggtttggcttgatgaaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagtgattatgtgaggttc 12536412  T
Q  345 tggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    |||||| | |||||||| ||||||||||| |||| |||||    
T  12536411 tggaaaccaatttttggatggttgaaacttgaatttttct 12536372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 13 - 147
Target Start/End: Complemental strand, 43929487 - 43929352
Alignment:
Q  13 caagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatg 112  Q
    |||||||||||||| |||||| ||||||||| |||||||  ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||     
T  43929487 caagtgaagaaccggagagattgtagagctttgttcatctaaattaaggtaagggtgaggctaactttcaataattatagtgtatgtaaattctgaaatt 43929388  T
Q  113 gatttaacatg-tagttgtttatgaatttgggaatt 147  Q
    |||||||||||  |||||||| ||| ||||||||||    
T  43929387 gatttaacatgagagttgtttttgattttgggaatt 43929352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 254 - 384
Target Start/End: Original strand, 37641696 - 37641827
Alignment:
Q  254 cagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatc 352  Q
    ||||||| |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||| | |||||||| |    
T  37641696 cagtttttgggtttgggttgatgaaaattgggattttcgcttgaatagtcggtgtctaaacgtttatgcaaataagtgattatgtgaggttttggaaacc 37641795  T
Q  353 gatttttgggtggttgaaactcgaatctttct 384  Q
    ||||||||||||||| ||||| |||| |||||    
T  37641796 gatttttgggtggtttaaacttgaatttttct 37641827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 251 - 384
Target Start/End: Complemental strand, 36167384 - 36167250
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaa 349  Q
    |||||||||| | |||||| | |||| ||||||||||||||||||||| |||||||||||||| ||||| |||||| || |||||||||| | |||||||    
T  36167384 aatcagtttttgagtttggattgatgaaaattgggattttcgcttgaagagtcggtgtctaaatgttttggcaaatgagtgattatgtgaggttttggaa 36167285  T
Q  350 atcgatttttgggtggttgaaactcgaatctttct 384  Q
    | |||||||||||||||||||||| ||||||||||    
T  36167284 accgatttttgggtggttgaaactggaatctttct 36167250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 251 - 340
Target Start/End: Original strand, 9511115 - 9511204
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga 340  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  9511115 aatcagttttggggtttgggttgatgaaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataaaggattatgtga 9511204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 251 - 340
Target Start/End: Original strand, 9519090 - 9519179
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga 340  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  9519090 aatcagttttggggtttgggttgatgaaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataaaggattatgtga 9519179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 251 - 373
Target Start/End: Complemental strand, 10551157 - 10551034
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaa 349  Q
    |||||||||| | |||||| | |||| ||||||||||||||||||||| |||||||||||||| |||||||||||| || |||||||||| | |||||||    
T  10551157 aatcagtttttgagtttggattgatgaaaattgggattttcgcttgaagagtcggtgtctaaatgtttttgcaaatgagtgattatgtgaggttttggaa 10551058  T
Q  350 atcgatttttgggtggttgaaact 373  Q
    | ||||||||||||||||||||||    
T  10551057 accgatttttgggtggttgaaact 10551034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 256 - 384
Target Start/End: Original strand, 45530807 - 45530937
Alignment:
Q  256 gttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttggaaatcga- 354  Q
    ||||||||||| |||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||| |     
T  45530807 gttttggggtt-gggttgatgaaaattaggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataggggattatgtgaggtttggaaatcaat 45530905  T
Q  355 --tttttgggtggttgaaactcgaatctttct 384  Q
      |||||||||||||| |||| |||| |||||    
T  45530906 tttttttgggtggttggaacttgaatttttct 45530937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 278 - 384
Target Start/End: Original strand, 13667308 - 13667414
Alignment:
Q  278 aaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgatttttgggtggttgaaactcga 376  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||| ||    
T  13667308 aaattgggattttcgcttgaaaactcggtgtctaaacg-ttttgcaaataagagattatgcgaggtttgggaaatcgatttttaggtggttgaaacttga 13667406  T
Q  377 atctttct 384  Q
     |||||||    
T  13667407 gtctttct 13667414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 251 - 384
Target Start/End: Original strand, 29172050 - 29172181
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaa 349  Q
    ||||| |||||||||| ||||  ||| |||||||||||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||| ||| ||||    
T  29172050 aatcaattttggggtt-gggttaatgaaaattgggattttcccttgaaa-gtcggtgtctaaacgtttt-gcaaataagcgattatgtgaggttttggaa 29172146  T
Q  350 atcgatttttgggtggttgaaactcgaatctttct 384  Q
    |||||||||||||||||||||||| |||| |||||    
T  29172147 atcgatttttgggtggttgaaacttgaatttttct 29172181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 251 - 373
Target Start/End: Original strand, 34851498 - 34851619
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaa 349  Q
    |||||||||||||||| ||||  ||| |||||||||||||| |||||| ||||||||| |||||| ||||||||||||| |||||||||| | |||||||    
T  34851498 aatcagttttggggtt-gggttaatgaaaattgggattttcccttgaagagtcggtgtataaacg-ttttgcaaataagtgattatgtgaggttttggaa 34851595  T
Q  350 atcgatttttgggtggttgaaact 373  Q
    |||||| |||||||||||||||||    
T  34851596 atcgatatttgggtggttgaaact 34851619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 254 - 341
Target Start/End: Complemental strand, 37038898 - 37038812
Alignment:
Q  254 cagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgag 341  Q
    ||||||||||||| | || |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37038898 cagttttggggtt-gagttgatgaaaattgagattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgag 37038812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 251 - 373
Target Start/End: Complemental strand, 21619235 - 21619112
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaa 349  Q
    |||||||||| | |||||| | |||| |||||| |||||| ||||||| || ||||||||||| ||||| |||||| || |||||||||| | |||||||    
T  21619235 aatcagtttttgagtttggattgatgaaaattgagatttttgcttgaagagacggtgtctaaatgttttggcaaatgagggattatgtgaggttttggaa 21619136  T
Q  350 atcgatttttgggtggttgaaact 373  Q
    | ||||||||||||||||||||||    
T  21619135 accgatttttgggtggttgaaact 21619112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 262 - 384
Target Start/End: Original strand, 22146967 - 22147089
Alignment:
Q  262 gggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcgatttttg 360  Q
    |||||||||| |||| ||| ||| ||||||||||||| | |||||||||||| | ||||||||||||| |||||||||| | |||||||| |||||||||    
T  22146967 gggtttgggttgatgaaaactggaattttcgcttgaagattcggtgtctaaatg-ttttgcaaataagtgattatgtgaggttttggaaaccgatttttg 22147065  T
Q  361 ggtggttgaaactcgaatctttct 384  Q
    ||||||| ||||| |||| |||||    
T  22147066 ggtggtttaaacttgaatttttct 22147089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 325
Target Start/End: Original strand, 19568407 - 19568480
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaa 325  Q
    ||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19568407 aatcaattttggggtt-gggttgatgaaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaa 19568480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 278 - 384
Target Start/End: Original strand, 11849819 - 11849923
Alignment:
Q  278 aaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaaatcgatttttgggtggttgaaactcga 376  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||   || ||| |||| ||| || |||||||||| |||||||||||||||||| ||    
T  11849819 aaattgggattttcgcttgaaaactcggtgtctaaacgtttttgca---aacagagtatgcgaggttctggaaatcgagttttgggtggttgaaacttga 11849915  T
Q  377 atctttct 384  Q
    || |||||    
T  11849916 atttttct 11849923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 285 - 384
Target Start/End: Complemental strand, 15517473 - 15517374
Alignment:
Q  285 gattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcgatttttgggtggttgaaactcgaatctttc 383  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||| | |||| |||| ||||||||||| ||||||||| |||| ||||    
T  15517473 gattttcgcttgaaaagtcagtgtctaaacg-ttttgcaaataagtgattatgtgaggttttgaaaattgatttttgggtagttgaaacttgaatttttc 15517375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 16645068 - 16645000
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtg 69  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  16645068 agggagaagagccaagtgaagaaccggagagatcgtagagcttcgttggtcagaattaaggtaagggtg 16645000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 17513682 - 17513588
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    ||||| |||||||||| ||||  ||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||    
T  17513682 aatcaattttggggtt-gggttaatgaaaattgggattttcccttgaaaagtcggtgtctaaacg-ttttgcaaataagagactatgtgagttttgg 17513588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 280 - 346
Target Start/End: Original strand, 42324199 - 42324265
Alignment:
Q  280 attgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttg 346  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  42324199 attgagattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataaggaattatgtgaggtttg 42324265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 278 - 371
Target Start/End: Complemental strand, 20188552 - 20188461
Alignment:
Q  278 aaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaaatcgatttttgggtggttgaaa 371  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||   || ||| |||||||| || |||||||||| ||| ||||||||||||    
T  20188552 aaattgggattttcgcttgaaaactcggtgtctaaacgtttttgca---aacagagtatgtgaggttctggaaatcgagtttggggtggttgaaa 20188461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 6820216 - 6820152
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaaca 121  Q
    ||||||||||||||  |||||| |||||||| ||||||||||||||||||| ||| |||||||||    
T  6820216 taaggtaagggtgatactaactttcaataattatagtgtatgtaaattctgtaattgatttaaca 6820152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 18893745 - 18893659
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaat--ggatttaacatgtagttgtt 131  Q
    |||||||| || |||||||||||||||||||||  ||| |||||||||||||  ||||||||||| |   |||||||||||| ||||||    
T  18893745 gttcatcaaaactaaggtaagggtgaggctaacattcagtaatcatagtgta--taaattctgaatttgtgatttaacatgttgttgtt 18893659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 6804853 - 6804922
Alignment:
Q  18 gaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataat 87  Q
    ||||||||  |||||| ||| |||||||||||||  |||||||||||||||||| |||||  ||||||||    
T  6804853 gaagaaccagagagattgtaaagcttcgttcatctaaattaaggtaagggtgagactaaccttcaataat 6804922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 34851296 - 34851349
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaa 109  Q
    ||||||||||||||||||||||||  ||| |||||||||||||  |||||||||||    
T  34851296 aattaaggtaagggtgaggctaacattcagtaatcatagtgta--taaattctgaa 34851349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 9534386 - 9534348
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcata 91  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  9534386 gaattaaggtaagggtgagactatctctcaataatcata 9534348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 17513900 - 17513839
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtat 97  Q
    ||||||||| |||||||| |  ||||||||||||||| ||||| |||| ||||||||||||||    
T  17513900 gtagagctttgttcatca-atctaaggtaagggtgagactaacactcagtaatcatagtgtat 17513839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 10833297 - 10833359
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaa 109  Q
    |||||||| || ||||||||||||||| |||||  ||| |||||||||||||  |||||||||||    
T  10833297 gttcatcaaaactaaggtaagggtgagactaacattcagtaatcatagtgta--taaattctgaa 10833359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 11325027 - 11325075
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaat 84  Q
    ||||||||| |||||||| ||| |||||||||||||| ||||||||||||    
T  11325027 gtagagctttgttcatca-aatcaaggtaagggtgagactaactctcaat 11325075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 18929304 - 18929267
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcat 90  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  18929304 gaattaaggtaagggtgagactatctctcaataatcat 18929267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 29171852 - 29171893
Alignment:
Q  56 ttaaggtaagggtgaggctaactctcaataatcatagtgtat 97  Q
    |||||||||||||||| ||||| |||| ||||||||||||||    
T  29171852 ttaaggtaagggtgagactaacactcagtaatcatagtgtat 29171893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 51602504 - 51602552
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaat 84  Q
    ||||||||| |||||||| |  ||||||||||||||||||||||||||||    
T  51602504 gtagagctttgttcatca-atctaaggtaagggtgaggctaactctcaat 51602552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 2247629 - 2247680
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataat 87  Q
    ||||||||| |||||||| |  ||||||||||||||| |||||||||||||||    
T  2247629 gtagagctttgttcatca-atctaaggtaagggtgagactaactctcaataat 2247680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 11913867 - 11913820
Alignment:
Q  36 tagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaat 84  Q
    |||||||| |||||||| |  ||||||||||||||||||||||||||||    
T  11913867 tagagctttgttcatca-atctaaggtaagggtgaggctaactctcaat 11913820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 13437311 - 13437216
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaat--ggatttaacatgtagttgtt 131  Q
    ||||||||| |||||||| |  ||||||||||||||| |||||  ||| |||||||||||||  ||||||||||| |   |||||||||||| ||||||    
T  13437311 gtagagctttgttcatca-atctaaggtaagggtgagactaacattcagtaatcatagtgta--taaattctgaatttatgatttaacatgttgttgtt 13437216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 14288168 - 14288208
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaata 85  Q
    ||||||| |||||||||||||||||||| | ||||||||||    
T  14288168 gttcatctgaattaaggtaagggtgaggtttactctcaata 14288208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 277; Significance: 1e-155; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 13 - 384
Target Start/End: Complemental strand, 52984318 - 52983946
Alignment:
Q  13 caagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatg 112  Q
    |||||||||||||| |||||| ||||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||     
T  52984318 caagtgaagaaccggagagattgtagagctttgttcatctaaattaaggtaatggtgaggctaactctcaataatcatagtgtatgcaaattctgaaatt 52984219  T
Q  113 gatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||    
T  52984218 gatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggcaataaag 52984119  T
Q  213 gatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaa 312  Q
    |||||||||||| ||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||| |||| | ||||||||||||| ||||||    
T  52984118 gatgtttagatttcagattaatcacaaactaagtttccaatcagttttggggtatgggtcgatggaaattggaatttacacttgaaaagtcggagtctaa 52984019  T
Q  313 acgtttttgcaaataagagattatgtgagattt-ggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||| |||||    
T  52984018 acgtttttgcaaataagagattatgtgaggtttgggaaatcgatttttgggtggttgaaacttgaatatttct 52983946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 384
Target Start/End: Complemental strand, 18824723 - 18824340
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgta 100  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18824723 agggagaagagccaagtgaagaaccggagagatcgtagagcttcgttcgtcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgta 18824624  T
Q  101 aattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggatt 200  Q
    || ||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| | ||||||||||||    
T  18824623 aactctaaaattgatttaacatgtggttgtttatgaatttgggaattagggttagaatgtagaattgaattgtggaaagaagtagatgatctgatggatt 18824524  T
Q  201 agggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaa 300  Q
    || |||||| ||||||||||||||| ||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||||| |||||||| |||||||    
T  18824523 agagtgataaaggatgtttagattgtagaataatcacagactaagtttccaatcagtattggggtttgagtcgatggaaattgagattttcgtttgaaaa 18824424  T
Q  301 gtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||| ||||||| |||||| ||||||||||||| |||| |||||    
T  18824423 gtcggtgtctaaa-ggttttgcaaataagagattatgtgaggtttgggaaatcaatttttaggtggttgaaacttgaatttttct 18824340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 35 - 365
Target Start/End: Complemental strand, 21660442 - 21660111
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttat 134  Q
    ||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  21660442 gtagagctttgttcatca-attcaaggtaagggtgaggctaactctcaataatcatagtgtgtgtaaattctgaaattgatttaacatgtagttgtttat 21660344  T
Q  135 gaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaat 234  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  21660343 gaatttgggaattagggttagcatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgataaaggatgtttagattgtagattaat 21660244  T
Q  235 cacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgg-gattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagat 333  Q
    ||| ||||||||| | ||||||||||||||||||||||||||||||||||  ||||  | ||||| |||||| ||||||||||||||| ||| |||||||    
T  21660243 cacggactaagttcccaatcagttttggggtttgggtcgatggaaattggaaatttatgtttgaagagtcggagtctaaacgtttttgaaaaaaagagat 21660144  T
Q  334 tatgtgagattt-ggaaatcgatttttgggtgg 365  Q
    |||||||| ||| || |||||||||| ||||||    
T  21660143 tatgtgaggtttggggaatcgattttggggtgg 21660111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 35 - 382
Target Start/End: Complemental strand, 18271393 - 18271047
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttat 134  Q
    ||||||||| |||||||| | | |||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||    
T  18271393 gtagagctttgttcatca-attcaaggtaagggtgagactaactctcaataatcatagtgtatgtaaactctgaaattgatttaacatgttgttgtttat 18271295  T
Q  135 gaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaat 234  Q
    |||||||||||||||||||||||||||||||||||| || | ||||||||  ||||||||||||||||||||||| | ||||||||||||  ||||||||    
T  18271294 gaatttgggaattagggttagaatgtagaattgaattgtggaaagaagtatataatctgatggattagggtgataaaagatgtttagattatagattaat 18271195  T
Q  235 cacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagatt 334  Q
    || |||||| ||||| ||| ||| ||||||||||||| |||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||||||||    
T  18271194 catagactacgtttccaataagtattggggtttgggttgatggaaattgggattttcgtttgaaaaattggtgtctaaacg-ttttgcaaataagagatt 18271096  T
Q  335 atgtgagattt-ggaaatcgatttttgggtggttgaaactcgaatcttt 382  Q
    ||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  18271095 atgtgaggtttgggaaatcgatttttgggtggttgaaacttgaatcttt 18271047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 35 - 382
Target Start/End: Complemental strand, 18276047 - 18275701
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttat 134  Q
    ||||||||| |||||||| | | |||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||    
T  18276047 gtagagctttgttcatca-attcaaggtaagggtgagactaactctcaataatcatagtgtatgtaaactctgaaattgatttaacatgttgttgtttat 18275949  T
Q  135 gaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaat 234  Q
    |||||||||||||||||||||||||||||||||||| || | ||||||||  ||||||||||||||||||||||| | ||||||||||||  ||||||||    
T  18275948 gaatttgggaattagggttagaatgtagaattgaattgtggaaagaagtatataatctgatggattagggtgataaaagatgtttagattatagattaat 18275849  T
Q  235 cacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagatt 334  Q
    || |||||| ||||| ||| ||| ||||||||||||| |||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||||||||    
T  18275848 catagactacgtttccaataagtattggggtttgggttgatggaaattgggattttcgtttgaaaaattggtgtctaaacg-ttttgcaaataagagatt 18275750  T
Q  335 atgtgagattt-ggaaatcgatttttgggtggttgaaactcgaatcttt 382  Q
    ||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  18275749 atgtgaggtttgggaaatcgatttttgggtggttgaaacttgaatcttt 18275701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 139 - 382
Target Start/End: Complemental strand, 21473757 - 21473514
Alignment:
Q  139 ttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcaca 238  Q
    |||||||||||||||||||||||||||||||| || | ||||||||| |||| |||||||||||||||||| ||||||||||||||| ||||||||||||    
T  21473757 ttgggaattagggttagaatgtagaattgaattgtagaaagaagtagataatttgatggattagggtgataaaggatgtttagattgtagattaatcaca 21473658  T
Q  239 gactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgt 338  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||    
T  21473657 gactaagtttccaatcagtattggggtttgagtcgatggaaattgggattttcgtttgaatagtcggtgtctaaacg-ttttgcaaataagagattatgt 21473559  T
Q  339 gagattt-ggaaatcgatttttgggtggttgaaactcgaatcttt 382  Q
    ||| ||| |||||||||||||||||||||||||||| ||||||||    
T  21473558 gaggtttgggaaatcgatttttgggtggttgaaacttgaatcttt 21473514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 204 - 384
Target Start/End: Original strand, 13527863 - 13528041
Alignment:
Q  204 gtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtc 303  Q
    |||||| ||||||||||||||| |||||||| | || ||||  ||| |||||||||||||||| ||||  |||||||||||||||||| |||||||||||    
T  13527863 gtgataaaggatgtttagattgtagattaattatagtctaatgttccaatcagttttggggtt-gggttaatggaaattgggattttcccttgaaaagtc 13527961  T
Q  304 ggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    ||||||||||||  |||||||||||| |||||||||| | ||||||||||||||||||||||||||||||| |||| |||||    
T  13527962 ggtgtctaaacg--tttgcaaataagcgattatgtgaggttttggaaatcgatttttgggtggttgaaacttgaatttttct 13528041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 254 - 384
Target Start/End: Complemental strand, 51476842 - 51476711
Alignment:
Q  254 cagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttggaaatcg 353  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||    
T  51476842 cagttttggggtt-gggttgatgaaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgtaaataagggattgtgtgaggtttggaaatcg 51476744  T
Q  354 at--ttttgggtggttgaaactcgaatctttct 384  Q
    ||  |||||||||||||||||| |||| |||||    
T  51476743 atttttttgggtggttgaaacttgaatttttct 51476711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 35064633 - 35064523
Alignment:
Q  13 caagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatg 112  Q
    |||||||||||||| |||||||||||||||| |||||||  ||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||     
T  35064633 caagtgaagaaccggagagatcgtagagctttgttcatctaaattaaggtaagggtgaggctgactttcaataattatagtgtatgtaaattctgaaatt 35064534  T
Q  113 gatttaacatg 123  Q
    |||||||||||    
T  35064533 gatttaacatg 35064523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 250 - 378
Target Start/End: Original strand, 7320792 - 7320920
Alignment:
Q  250 gaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tgga 348  Q
    ||||||||||| ||||||| || |||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||| || ||||    
T  7320792 gaatcagttttagggtttgagttgatgaaaattgtgattt-cgcttgaaaagtcggtgtataaacgtttttgcaaataagtgattatgtgaggttctgga 7320890  T
Q  349 aatcgatttttgggtggttgaaactcgaat 378  Q
    ||||||||||||||||||| ||||| ||||    
T  7320891 aatcgatttttgggtggttaaaacttgaat 7320920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 51324357 - 51324262
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    |||||||||||||||| |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  51324357 aatcagttttggggtt-gggttgatgaaaattgggattttcgcttcaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggtttgg 51324262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 20058310 - 20058215
Alignment:
Q  278 aaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaaatcgatttttgggtggttgaaact 373  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||  |||||||||| || |||||| ||||||||||||||||||||||    
T  20058310 aaattgggattttcgcttgaaaagttggtgtctaaacg-ttttgcaaataagtaattatgtgaggttctggaaaccgatttttgggtggttgaaact 20058215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 20058577 - 20058470
Alignment:
Q  16 gtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggat 115  Q
    ||||||||||| |||||| ||||||||| |||||||  ||||||||||||||||||||||||  |||||| | || ||||||||||||| |||||| |||    
T  20058577 gtgaagaaccggagagattgtagagctttgttcatctaaattaaggtaagggtgaggctaaccttcaatagttatggtgtatgtaaattatgaaattgat 20058478  T
Q  116 ttaacatg 123  Q
    ||||||||    
T  20058477 ttaacatg 20058470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 21239257 - 21239338
Alignment:
Q  265 tttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttg 346  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| ||||    
T  21239257 tttgggttgatgaaaattgggattttcgcttgaaaagtcggtgtcaaaacgattttgcaaataagggattatgtgaggtttg 21239338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13880482 - 13880550
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtg 69  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  13880482 agggagaagagccaagtgaagaaccggagagatcgtagagcttcgttcgtcagaattaaggtaagggtg 13880550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 251 - 347
Target Start/End: Original strand, 7791756 - 7791850
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    |||||||||||||||| ||||  ||| ||||||||| |||| ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||    
T  7791756 aatcagttttggggtt-gggttaatgaaaattgggactttcccttgaaaagtcggtgtctaaacg-ttttgcaaataagagactatgtgaggtttgg 7791850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 44821965 - 44822051
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataat 87  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||||| ||| | |||||  ||||||||    
T  44821965 agggagaagagccaagtgaagaaccggagagatcgtagagcttcgttcgtcataattaaggtaagagtgggactaaccttcaataat 44822051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 20030866 - 20030934
Alignment:
Q  278 aaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||    
T  20030866 aaattgggattttcccttgaaaagtcggtgtctaaacg-ttttgcaaataagagactatgtgaggtttgg 20030934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 297436 - 297393
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaact 78  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||    
T  297436 gtagagctttgttcatctgaattaaggtaagggtgaggctaact 297393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 45308228 - 45308185
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaact 78  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||    
T  45308228 gtagagctttgttcatctgaattaaggtaagggtgaggctaact 45308185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 25091366 - 25091448
Alignment:
Q  5 agaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataat 87  Q
    ||||||| |||| |||| |||| |||||| ||||| | | |||| || ||||||||||||||||||| ||| |||||||||||    
T  25091366 agaagagccaagagaaggaccggagagattgtagaacgttgttcgtctgaattaaggtaagggtgagactatctctcaataat 25091448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 20805379 - 20805342
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaataatcata 91  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  20805379 aattaaggtaagggtgaggctaactctcaatgatcata 20805342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 32651630 - 32651591
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  32651630 aattaaggtaagggtgagactatctctcaataatcatagt 32651591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 2332041 - 2332091
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaata 85  Q
    ||||||||| ||||||| |||||||||||||||||||| | ||| ||||||    
T  2332041 gtagagctttgttcatctgaattaaggtaagggtgaggtttactttcaata 2332091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 7791538 - 7791599
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtat 97  Q
    ||||||||| |||||||| |  ||||||||||||||| ||||| |||| ||||||||||||||    
T  7791538 gtagagctttgttcatca-atctaaggtaagggtgagactaacactcagtaatcatagtgtat 7791599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 20437012 - 20437058
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcata 91  Q
    |||||||  |||||||||||||||||| ||| |||||||||||||||    
T  20437012 gttcatctaaattaaggtaagggtgagactatctctcaataatcata 20437058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 21526767 - 21526824
Alignment:
Q  39 agcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtat 97  Q
    ||||| |||||||| ||||||||||||||||||  ||||||||||| || |||||||||    
T  21526767 agctttgttcatca-aattaaggtaagggtgagaataactctcaatgatgatagtgtat 21526824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 28203735 - 28203800
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaa 101  Q
    ||||||||| |||||||| | | |||||||||||||||||||||||||||  | ||||| |||||||    
T  28203735 gtagagctttgttcatca-attcaaggtaagggtgaggctaactctcaatggttatagtttatgtaa 28203800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 58 - 122
Target Start/End: Complemental strand, 13227940 - 13227876
Alignment:
Q  58 aaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacat 122  Q
    |||||||||||||| ||||||||||||||| ||||  ||| ||| ||||||  | ||||||||||    
T  13227940 aaggtaagggtgagactaactctcaataattatagattatataacttctgattttgatttaacat 13227876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 18712858 - 18712818
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||||| ||||||| ||| |||||||||||||||||    
T  18712858 gaattaaggtatgggtgagactatctctcaataatcatagt 18712818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 276; Significance: 1e-154; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 4 - 362
Target Start/End: Complemental strand, 32951004 - 32950645
Alignment:
Q  4 gagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaat 103  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32951004 gagaagagccaagtgaagaaccggagagatcgtagagcttcgttcgtcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaat 32950905  T
Q  104 tctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagg 203  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  32950904 tctgaaattgatttaacatgtagttgtttatgaatttgggaattagggttagcatgtagaattgaatcgttggaagaagtaggtaatctaatggattagg 32950805  T
Q  204 gtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtc 303  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||| ||||||| |||| ||||  ||||||||||||    
T  32950804 gtgataaaggatgtttagattgtagattgatcacagactaagttcccaatcagttttggggtttgggttgatggaagttggaatttaagcttgaaaagtc 32950705  T
Q  304 ggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgatttttggg 362  Q
    || ||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||    
T  32950704 ggagtctaaacgtttttgcaaacaagagattatgtgaggtttgggaaatcgatttttggg 32950645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 101 - 378
Target Start/End: Original strand, 22583703 - 22583981
Alignment:
Q  101 aattctgaaatgga-tttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggat 199  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22583703 aattctgaaattgaatttaacatgtagttgtttatgaatttgggaattagggttagaatttagaattgaatcgttggaagaagtaggtaatctgatggat 22583802  T
Q  200 tagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaa 299  Q
    |||||||||| |||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22583803 tagggtgataaaggatgtttagattgcagattattcacatactaagtttccaatcagttttggggtttgggttgatggaaattgggattttcgcttgaaa 22583902  T
Q  300 agtcggtgtctaaacgtttttgcaaataagagattatgtgagatttggaaatcgatttttgggtggttgaaactcgaat 378  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  22583903 agtcggtgtctaaacgtttttgcaaataagggattatgtgaggtttggaaatcgatttttgggtggttgaaacttgaat 22583981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 58 - 384
Target Start/End: Complemental strand, 24980162 - 24979836
Alignment:
Q  58 aaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaa 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24980162 aaggtaagggtgaggctaactctcaataatcatagtgtatgtaaactctgaaattgatttaacatgtagttgtttatgaatttgggaattagggttagaa 24980063  T
Q  158 tgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagt 257  Q
    ||||||||||||| || | |||| |||| ||| ||||||||||||||||||| ||||||||||||||| | ||||| |  |||||||||||| |||||||    
T  24980062 tgtagaattgaattgtggaaagatgtagataaactgatggattagggtgataaaggatgtttagattgtaaattaaacctagactaagtttccaatcagt 24979963  T
Q  258 tttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgatt 356  Q
     ||||||||| ||| |||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||    
T  24979962 attggggttttggttgatggaaattgggattttcgtttgaaaaattggtgtctaaacg-ttttgcaaataagagattatgtgaggtttgggaaatcaatt 24979864  T
Q  357 tttgggtggttgaaactcgaatctttct 384  Q
    ||||||||||||||||| |||| |||||    
T  24979863 tttgggtggttgaaacttgaatttttct 24979836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 101 - 384
Target Start/End: Complemental strand, 23889808 - 23889525
Alignment:
Q  101 aattctgaaatgga-tttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggat 199  Q
    ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||    
T  23889808 aattctgaaattgaatttaacatgtagttgtttatgaattttggaattagggttagaatttagaattgaatcgttcaaagaagtaggtaatatgatggat 23889709  T
Q  200 tagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaa 299  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  23889708 tagggtgataaaggatgtttagattgcagattaatcacaaactaagtttccaatcagttttggggtttgggttgatggaaattgagattttcgcttgaaa 23889609  T
Q  300 agtcggtgtctaaacgtttttgcaaataagagattatgtgagatttggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    | |||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||| |||| |||||    
T  23889608 aatcggtgtctaaacgtttttgcaaataagggattatgtgaggtttggaaatcga-ttttgggtggttgaaacttgaatttttct 23889525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 139 - 382
Target Start/End: Original strand, 17611384 - 17611616
Alignment:
Q  139 ttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcaca 238  Q
    |||| ||||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  17611384 ttggaaattagggttagaatgtagaattgaattgtagaaagaagtagataatctgatggattagggtgataaaggatgtttagattgtagattaatcaca 17611483  T
Q  239 gactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgt 338  Q
    ||||||||||| |||||||            ||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||    
T  17611484 gactaagtttccaatcagt-----------agtcgatggaaattgggattttcgtttgaatagtcggtgtctaaacg-ttttgcaaataagagattatgt 17611571  T
Q  339 gagattt-ggaaatcgatttttgggtggttgaaactcgaatcttt 382  Q
    ||| ||| |||||||||||||||||||||||||||| ||||||||    
T  17611572 gaggtttgggaaatcgatttttgggtggttgaaacttgaatcttt 17611616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 146 - 383
Target Start/End: Complemental strand, 34302508 - 34302270
Alignment:
Q  146 ttagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaag 245  Q
    |||||||||||| |||||||||||| || | ||||||||| | |||| |||||||||||||||| ||||||||||||||| ||| |||||||| ||||||    
T  34302508 ttagggttagaaagtagaattgaattgtggaaagaagtagatgatctaatggattagggtgataaaggatgtttagattgtagaataatcacatactaag 34302409  T
Q  246 tttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt 345  Q
    |||| ||||||| |||||||||| | |||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  34302408 tttccaatcagtattggggtttgagccgatgg-aattgggattttcgtttgaaaagtcggtgtctaaacg-ttttgcaaataagagattatgtgaggttt 34302311  T
Q  346 ggaaatcga---tttttgggtggttgaaactcgaatctttc 383  Q
    |||||||||   ||||||||||||||||||| |||| ||||    
T  34302310 ggaaatcgattttttttgggtggttgaaacttgaatttttc 34302270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 146 - 384
Target Start/End: Complemental strand, 24496563 - 24496322
Alignment:
Q  146 ttagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaag 245  Q
    |||||||||||| |||||||||||| || | ||||||||| | || | |||||||||||||||| ||||||||||||||| ||| |||||||||||||||    
T  24496563 ttagggttagaaagtagaattgaattgtggaaagaagtagatgatttaatggattagggtgataaaggatgtttagattgtagaataatcacagactaag 24496464  T
Q  246 tttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt 345  Q
    |||| ||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  24496463 tttccaatcagtattggggtttgagccgatggaaattgggattttcgtttgaaaagtcggtgtctaaacg-ttttgcaaataagagattatgtgaggttt 24496365  T
Q  346 g-gaaatcga---tttttgggtggttgaaactcgaatctttct 384  Q
    | ||||||||   ||||| ||||||||||||| |||| |||||    
T  24496364 gtgaaatcgattttttttaggtggttgaaacttgaatttttct 24496322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 17272598 - 17272779
Alignment:
Q  18 gaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggattt 117  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||| |||||    
T  17272598 gaagaaccggagagatcgtagagcttcgttcatctaaattaaggtaaaggtgaggctaaatctcaataatcatagtgtatgtgaattctgaaattgattt 17272697  T
Q  118 aacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggat 199  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| || | ||||||||| |||||||||||||    
T  17272698 aacatgtggttgtttatgaattttggaattagggttagaatgtagaattgaattgtggaaagaagtagataatctgatggat 17272779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 146 - 384
Target Start/End: Complemental strand, 23451432 - 23451191
Alignment:
Q  146 ttagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaag 245  Q
    ||||||||||||||||||||||||| || | ||||||||| | ||||||||||||||||||||| || |||||| ||||| ||| | |||||||| ||||    
T  23451432 ttagggttagaatgtagaattgaattgtagaaagaagtagatgatctgatggattagggtgataaagaatgtttcgattgtagaatgatcacagattaag 23451333  T
Q  246 tttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt 345  Q
    |||| ||||||| |||||||||| | ||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  23451332 tttccaatcagtattggggtttgagccgatggaaattgggattttagtttgaaaagtcggtgtctaaacg-ttttgcaaataagagattatgtgaggttt 23451234  T
Q  346 gg-aaatcga---tttttgggtggttgaaactcgaatctttct 384  Q
    || |||||||   ||||||||||||||||||| |||| |||||    
T  23451233 ggaaaatcgattttttttgggtggttgaaacttgaatttttct 23451191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 254 - 378
Target Start/End: Complemental strand, 3273739 - 3273613
Alignment:
Q  254 cagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttggaaatcg 353  Q
    ||||||||||||| |||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||| |||||||||||    
T  3273739 cagttttggggtt-gggttgatgaaaattgggattttcgcttgaaaagttggtgtctaaacgtttttgcaaataagggagtatgtgaggtttggaaatcg 3273641  T
Q  354 at---ttttgggtggttgaaactcgaat 378  Q
    ||   |||||||||||||||||| ||||    
T  3273640 attttttttgggtggttgaaacttgaat 3273613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 13 - 147
Target Start/End: Original strand, 22919927 - 22920062
Alignment:
Q  13 caagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatg 112  Q
    |||||||||||||| |||||| |||||| || ||||||| || |||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||     
T  22919927 caagtgaagaaccggagagattgtagagttttgttcatctgatttaaagtaagggtgaggctaactctcaataatcatagtgtatataaattctgagatt 22920026  T
Q  113 gatttaacatgt-agttgtttatgaatttgggaatt 147  Q
    ||||||||||||  ||||||| ||| ||||||||||    
T  22920027 gatttaacatgtgggttgtttttgattttgggaatt 22920062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 251 - 373
Target Start/End: Complemental strand, 26220405 - 26220282
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaa 349  Q
    |||||||||| | |||||| | |||| ||||||||||||||||||||| |||||||||||||| |||||||||||| || |||||||||| | |||||||    
T  26220405 aatcagtttttgagtttggattgatgaaaattgggattttcgcttgaagagtcggtgtctaaatgtttttgcaaatgagtgattatgtgaggttttggaa 26220306  T
Q  350 atcgatttttgggtggttgaaact 373  Q
    | | ||||||||||||||||||||    
T  26220305 accaatttttgggtggttgaaact 26220282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 251 - 347
Target Start/End: Original strand, 22532331 - 22532426
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    |||||||||||||||| |||| |||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| |||||    
T  22532331 aatcagttttggggtt-gggttgatgaaaattgggattttcgctagaagagtcggtgtctaaacgtttttgcaaataagggattatgtgaggtttgg 22532426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 251 - 347
Target Start/End: Original strand, 22537016 - 22537111
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    |||||||||||||||| |||| |||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| |||||    
T  22537016 aatcagttttggggtt-gggttgatgaaaattgggattttcgctagaagagtcggtgtctaaacgtttttgcaaataagggattatgtgaggtttgg 22537111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 251 - 347
Target Start/End: Original strand, 39694476 - 39694572
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    ||||| ||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  39694476 aatcaattttggggtttgggttgatgaaagttgagattttcgcttgaaaagtcggtgtctaaacatttttgcaaataagggattatgtgaggtttgg 39694572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 44522402 - 44522470
Alignment:
Q  278 aaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||    
T  44522402 aaattgggattttcccttgaaaagtcggtgtctaaacg-ttttgcaaataagagactatgtgaggtttgg 44522470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 20458083 - 20458014
Alignment:
Q  18 gaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataat 87  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||||||||||| |||||  ||||||||    
T  20458083 gaagaaccggagagatcgtagagcttcgttcatctaaattaaggtaagggtgagactaaccttcaataat 20458014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 28854889 - 28854846
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaact 78  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||    
T  28854889 gtagagctttgttcatctgaattaaggtaagggtgaggctaact 28854846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 21931763 - 21931725
Alignment:
Q  46 ttcatcagaattaaggtaagggtgaggctaactctcaat 84  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  21931763 ttcatctgaattaaggtaagggtgaggctaactctcaat 21931725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 26222538 - 26222603
Alignment:
Q  309 ctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgatttttgggtggttgaaact 373  Q
    ||||| |||||||||||| || ||||||||||| ||| ||||| | ||||||||||||||||||||    
T  26222538 ctaaatgtttttgcaaatgagtgattatgtgaggttttggaaaccaatttttgggtggttgaaact 26222603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 38184685 - 38184726
Alignment:
Q  46 ttcatcagaattaaggtaagggtgaggctaactctcaataat 87  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  38184685 ttcatctgaattaaggtaagggtgagactaactctcaataat 38184726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 23482041 - 23482089
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    |||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  23482041 gttcatctaaattaaggtaagggtgagactatctctcaataatcatagt 23482089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 347
Target Start/End: Complemental strand, 39364587 - 39364532
Alignment:
Q  292 gcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    ||||||||| |||| |||||||||||  ||||||||||||| |||||||| |||||    
T  39364587 gcttgaaaattcggagtctaaacgttcatgcaaataagagactatgtgagttttgg 39364532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 42559433 - 42559491
Alignment:
Q  34 cgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    |||||||||| |||||||| |  |||||||||||||||||||||||||||| || |||||    
T  42559433 cgtagagctttgttcatca-atctaaggtaagggtgaggctaactctcaatgattatagt 42559491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 14056564 - 14056615
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaa 110  Q
    ||||||||||||||| ||| ||||||||||| |||  |||||||||||||||||    
T  14056564 taaggtaagggtgagactatctctcaataataata--gtatgtaaattctgaaa 14056615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 20387557 - 20387508
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaata 85  Q
    ||||||||| |||||||| |  |||||||||||||||||||||||||||||    
T  20387557 gtagagctttgttcatca-atctaaggtaagggtgaggctaactctcaata 20387508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 25112031 - 25111980
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaa 110  Q
    ||||||||||||||| ||| ||||||||||| |||  |||||||||||||||||    
T  25112031 taaggtaagggtgagactatctctcaataataata--gtatgtaaattctgaaa 25111980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 43113078 - 43113041
Alignment:
Q  56 ttaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||||||||||||||||||||||| || |||||    
T  43113078 ttaaggtaagggtgaggctaactctcaatgattatagt 43113041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 18614330 - 18614294
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaataatcat 90  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  18614330 aattaaggtaagggtgagactatctctcaataatcat 18614294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 19750617 - 19750585
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaac 77  Q
    ||||||| |||||||||||||||||||||||||    
T  19750617 gttcatctgaattaaggtaagggtgaggctaac 19750585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 22433615 - 22433651
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagt 93  Q
    |||||||||||||||||||||||||||| || |||||    
T  22433615 taaggtaagggtgaggctaactctcaatgattatagt 22433651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 39364979 - 39364939
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||||||||||||| ||| ||||||||||| |||||    
T  39364979 gaattaaggtaagggtgagactatctctcaataataatagt 39364939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 275; Significance: 1e-153; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 3 - 384
Target Start/End: Original strand, 22777016 - 22777397
Alignment:
Q  3 ggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaa 102  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22777016 ggagaagagccaagtgaagaaccggagagatcgtagagcttcgttcatctgaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaa 22777115  T
Q  103 ttctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattag 202  Q
     |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || | ||||| ||| ||||||||||||||||    
T  22777116 ctctgaaattgatttaacatgtagttgttcatgaatttgggaattagggttagaatgtagaattgaattgtggaaagaaatagataatctgatggattag 22777215  T
Q  203 ggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagt 302  Q
    ||||||| ||||||||||||||| |||||||||| |||||||||||| ||||||| ||||||||||||| |||||||||||||||||||| ||||||| |    
T  22777216 ggtgataaaggatgtttagattgtagattaatcagagactaagtttccaatcagtattggggtttgggttgatggaaattgggattttcgtttgaaaaat 22777315  T
Q  303 cggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
     |||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||| ||||||||||    
T  22777316 aggtgtctaaacg-ttttgcaaataagagattatgtgaggtttgggaaatcgatttttgggcggttgaaacttgaatctttct 22777397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 18 - 384
Target Start/End: Original strand, 8952002 - 8952368
Alignment:
Q  18 gaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggattt 117  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  8952002 gaagaaccggagagatcgtagagcttcgttcatctaaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaactctgaaattgattt 8952101  T
Q  118 aacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||| |||||||||||||||| |||||||    
T  8952102 aacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaattgttggaagaagtagatgatcttatggattagggtgataaaggatgt 8952201  T
Q  218 ttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtt 317  Q
    |||||||| ||| ||||||||||||||||||| ||||||| |||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||| |    
T  8952202 ttagattgtagaataatcacagactaagtttccaatcagtattggagtttgagtcgatggaaattgggattttcgtttgaaaagtcggtgtctaaacg-t 8952300  T
Q  318 tttgcaaataagagattatgtgagattt-ggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||| |||| |||||    
T  8952301 tttgcaaataagagattatgtgaggtttgggaaatcgatttttaggtggttgaaacttgaatttttct 8952368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 35 - 384
Target Start/End: Original strand, 22356883 - 22357231
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttat 134  Q
    ||||||||| |||||||| |  |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  22356883 gtagagctttgttcatca-atctaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaactctgaaattgatttaacatgtagttgtttat 22356981  T
Q  135 gaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaat 234  Q
    |||||||||||||||||||||||||||||||||||| || | ||||||||| |||||||||||||||||| |||| ||||||||||||||| ||||||||    
T  22356982 gaatttgggaattagggttagaatgtagaattgaattgtggaaagaagtagataatctgatggattagggagataaaggatgtttagattgtagattaat 22357081  T
Q  235 cacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagatt 334  Q
    || |||||||||||| ||||| | ||||||||||||| ||||||||||||||| |||| ||||||| |||||||||||||| ||||||||||||| ||||    
T  22357082 catagactaagtttccaatcattattggggtttgggttgatggaaattgggatcttcgtttgaaaaatcggtgtctaaacg-ttttgcaaataagtgatt 22357180  T
Q  335 atgtgagatt-tggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    ||||||| || ||||||||||||||||||||||||||||| |||| |||||    
T  22357181 atgtgaggttctggaaatcgatttttgggtggttgaaacttgaatttttct 22357231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 57 - 319
Target Start/End: Original strand, 21663143 - 21663405
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttaga 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21663143 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaattgatttaacatgtagttgtttatgaatttgggaattagggttaga 21663242  T
Q  157 atgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcag 256  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | || |||    
T  21663243 atgaagaattgaatcgttggaagaagtaggtaatctgatggattagggtgataaaggatgtttagattgcagattaatcacagactaagttcccaaccag 21663342  T
Q  257 ttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttt 319  Q
    |||||||||||||||||||||||||||| ||||  | ||||||||| || |||||||||||||    
T  21663343 ttttggggtttgggtcgatggaaattggaatttatgtttgaaaagttggagtctaaacgtttt 21663405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 33 - 347
Target Start/End: Complemental strand, 22470899 - 22470588
Alignment:
Q  33 tcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtag-ttgtt 131  Q
    ||||||||||| |||||||| | | |||||||| |||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||  | |||||    
T  22470899 tcgtagagctt-gttcatca-attcaaggtaagagtgaggctaactttcaataattatagtgtatgtaaattctgaaattgatttaacatgagggttgtt 22470802  T
Q  132 tatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagatt 231  Q
      ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  22470801 cttga-tttgggaattagggttagcatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgataaaggatgtttagattgtagatt 22470703  T
Q  232 aatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagag 331  Q
     |||||||| |||||| | ||||||||||||||| ||||||||||||||||||  |||||| |||||||||||  || |||||| |||||||||||||||    
T  22470702 gatcacagattaagttcccaatcagttttggggtatgggtcgatggaaattggagttttcgtttgaaaagtcgaagtataaacg-ttttgcaaataagag 22470604  T
Q  332 attatgtgagatttgg 347  Q
    |||||||||| |||||    
T  22470603 attatgtgaggtttgg 22470588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 230 - 384
Target Start/End: Complemental strand, 10817686 - 10817531
Alignment:
Q  230 ttaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattggga-ttttcgcttgaaaagtcggtgtctaaacgtttttgcaaataa 328  Q
    ||||||| |||||||||||| ||||||| |||||||||||||  ||||||||| ||| |||||| ||||||| |||| ||||||||| ||||||||||||    
T  10817686 ttaatcatagactaagtttccaatcagtattggggtttgggtttatggaaatttggatttttcgtttgaaaaatcggcgtctaaacg-ttttgcaaataa 10817588  T
Q  329 gagattatgtgagatt-tggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    |  ||||| |||| || ||||||||||||||||||||||||||||| |||| |||||    
T  10817587 gtaattatatgaggttctggaaatcgatttttgggtggttgaaacttgaatttttct 10817531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 10817918 - 10817790
Alignment:
Q  3 ggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaa 102  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||  ||| |||||||||||||  ||||    
T  10817918 ggagaagagccaagtgaagaaccggagagatcgtagagcttcgttcatctgaattaaggtaagggtgagactaacattcagtaatcatagtgta--taaa 10817821  T
Q  103 ttctgaaat--ggatttaacatgtagttgtt 131  Q
    ||||||| |   |||||||||||| ||||||    
T  10817820 ttctgaatttgtgatttaacatgttgttgtt 10817790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 283 - 373
Target Start/End: Original strand, 21297585 - 21297676
Alignment:
Q  283 gggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaaatcgatttttgggtggttgaaact 373  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||| || || |||||||||||||||||||||||||||||    
T  21297585 gggattttcgcttgaaaagtcgctgtctaaacgtttttgcaaataagtgattatgtaaggttctggaaatcgatttttgggtggttgaaact 21297676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 246 - 383
Target Start/End: Original strand, 18318396 - 18318534
Alignment:
Q  246 tttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatt 344  Q
    |||| |||||||||| | |||||||| |||  ||||| |||||||||||| || ||||||||||||||  ||||||||||| || |||||||||| | ||    
T  18318396 tttctaatcagtttttgagtttgggttgataaaaattaggattttcgcttaaagagtcggtgtctaaatatttttgcaaatgagtgattatgtgaggttt 18318495  T
Q  345 tggaaatcgatttttgggtggttgaaactcgaatctttc 383  Q
    |||||| |||||||||||||||||||||| |||| ||||    
T  18318496 tggaaaccgatttttgggtggttgaaactggaatttttc 18318534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 285 - 373
Target Start/End: Original strand, 21311130 - 21311219
Alignment:
Q  285 gattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaaatcgatttttgggtggttgaaact 373  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||| || |||||||||||||||||||||| ||||||    
T  21311130 gattttcacttgaaaagtcggtgtctaaaagtttttgcaaataagtgattatgtgaggttctggaaatcgatttttgggtggtcgaaact 21311219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 278 - 358
Target Start/End: Original strand, 21405854 - 21405935
Alignment:
Q  278 aaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaaatcgatttt 358  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||||||    
T  21405854 aaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggttctgaaaatcgatttt 21405935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 262 - 384
Target Start/End: Complemental strand, 40726533 - 40726411
Alignment:
Q  262 gggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcgatttttg 360  Q
    |||||||||| |||| ||| ||| ||||||||||||| | |||||||||||||| ||||||||||||| |||||||||| | |||||||| |||||||||    
T  40726533 gggtttgggttgatgaaaactggaattttcgcttgaagattcggtgtctaaacg-ttttgcaaataagtgattatgtgaggttttggaaaccgatttttg 40726435  T
Q  361 ggtggttgaaactcgaatctttct 384  Q
    ||||||| ||||| |||| |||||    
T  40726434 ggtggtttaaacttgaatttttct 40726411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 278 - 384
Target Start/End: Original strand, 20765478 - 20765584
Alignment:
Q  278 aaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcgatttttgggtggttgaaactcga 376  Q
    |||||| |||||||||||||| |||||||||||||| | |||||||||| || |||||||||| | |||||||| | |||||||||||||||||||| ||    
T  20765478 aaattgagattttcgcttgaagagtcggtgtctaaatg-ttttgcaaatgagtgattatgtgaggttttggaaacctatttttgggtggttgaaactgga 20765576  T
Q  377 atctttct 384  Q
    || |||||    
T  20765577 atttttct 20765584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 251 - 378
Target Start/End: Complemental strand, 23539618 - 23539493
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaa 349  Q
    |||||||||||||||| ||||  ||| ||||||| ||||  | |||||||||||||||| || |||||| ||||||||| ||||||||||| || |||||    
T  23539618 aatcagttttggggtt-gggttaatgaaaattggaatttatgtttgaaaagtcggtgtccaa-cgtttt-gcaaataagtgattatgtgaggttctggaa 23539522  T
Q  350 atcgatttttgggtggttgaaactcgaat 378  Q
    ||| |||||||||||||||||||| ||||    
T  23539521 atcaatttttgggtggttgaaacttgaat 23539493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 30137973 - 30138041
Alignment:
Q  56 ttaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgt 124  Q
    ||||||||||||| || |||||| |||||||| ||||||||||||||||||||||| ||||||||||||    
T  30137973 ttaaggtaagggtaagactaactttcaataattatagtgtatgtaaattctgaaattgatttaacatgt 30138041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 361
Target Start/End: Original strand, 22007085 - 22007194
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttc-gcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-gga 348  Q
    ||||| |||||||||| ||||| ||| ||||||||| |||  | ||||||||| |||||| || |||||| ||||||||||||| ||||||| ||| |||    
T  22007085 aatcaattttggggtt-gggtcaatgaaaattgggactttatgtttgaaaagttggtgtccaa-cgtttt-gcaaataagagatcatgtgagttttggga 22007181  T
Q  349 aatcgatttttgg 361  Q
    |||||||||||||    
T  22007182 aatcgatttttgg 22007194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 23111188 - 23111236
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    |||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  23111188 gttcatctaaattaaggtaagggtgagactatctctcaataatcatagt 23111236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 24276499 - 24276550
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctga 108  Q
    |||||||||||||||||||||||||||| ||  |||| ||| ||||||||||    
T  24276499 taaggtaagggtgaggctaactctcaatgattctagtttatataaattctga 24276550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 24385714 - 24385663
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctga 108  Q
    |||||||||||||||||||||||||||| ||  |||| ||| ||||||||||    
T  24385714 taaggtaagggtgaggctaactctcaatgattctagtttatataaattctga 24385663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 26707444 - 26707397
Alignment:
Q  37 agagcttcgttcatcagaattaaggtaagggtgaggctaactctcaat 84  Q
    ||||||| |||||||| ||| |||||||||||||| ||||||||||||    
T  26707444 agagctttgttcatcaaaatcaaggtaagggtgagactaactctcaat 26707397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 26977178 - 26977131
Alignment:
Q  37 agagcttcgttcatcagaattaaggtaagggtgaggctaactctcaat 84  Q
    ||||||| |||||||| ||| |||||||||||||| ||||||||||||    
T  26977178 agagctttgttcatcaaaatcaaggtaagggtgagactaactctcaat 26977131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 18407940 - 18407978
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcata 91  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  18407940 gaattaaggtaagggtgagactatctctcaataatcata 18407978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 19512445 - 19512407
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcata 91  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  19512445 gaattaaggtaagggtgagactatctctcaataatcata 19512407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 28370051 - 28370089
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcata 91  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  28370051 gaattaaggtaagggtgagactatctctcaataatcata 28370089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 36461116 - 36461059
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||| |||||||| |  |||||||||||||||||||||||||||| || |||||    
T  36461116 gtagagctttgttcatca-atctaaggtaagggtgaggctaactctcaatgattatagt 36461059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 22438748 - 22438788
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtat 97  Q
    ||||||||||||||| ||| ||||||||||||||| |||||    
T  22438748 taaggtaagggtgagactatctctcaataatcataatgtat 22438788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 23539829 - 23539777
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtat 97  Q
    |||||||| || ||||||||| |||||||||||  ||| ||||||||||||||    
T  23539829 gttcatcaaaactaaggtaagtgtgaggctaacattcagtaatcatagtgtat 23539777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 33472543 - 33472638
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaat--ggatttaacatgtagttgtt 131  Q
    ||||||||| ||||||| ||  ||||||||||||||| |||||  ||| |||||||||||||  ||||||||||| |   |||||||||||| ||||||    
T  33472543 gtagagctttgttcatc-gatctaaggtaagggtgagactaacattcagtaatcatagtgta--taaattctgaatttgtgatttaacatgttgttgtt 33472638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 7 - 384
Target Start/End: Original strand, 14931077 - 14931454
Alignment:
Q  7 aagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattct 106  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  14931077 aagagccaagtgaagaaccgaagagatcgtagagcttcgttcgtcagaattaaggtaagggtgaggctaactctcaataatcatagtatatgtaaactct 14931176  T
Q  107 gaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtg 206  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| ||    
T  14931177 gaaattgatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaattgcgggaagaagtaggtaatctgatggattaggatg 14931276  T
Q  207 atagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggt 306  Q
    ||  ||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||  ||   ||||||||||||||     
T  14931277 attaaggatgtttagattgtagattaatcacagactaagtttccaatcaattttggggtttgggtcgatggaaattggagttgatgcttgaaaagtcgga 14931376  T
Q  307 gtctaaacgtttttgcaaataagagattatgtgagatttgg-aaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    ||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||| |||||    
T  14931377 gtctaaacg-ttttgcaaataagagattatgtgaggtttggaaaatcgatttttgggtggttgaaacttgaatttttct 14931454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 369
Target Start/End: Complemental strand, 10705837 - 10705468
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgta 100  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||||||||||    
T  10705837 agggagaagagccaagtgaagaaccggagagatcgtagagcttcgttcgtcataattaaggtaagggtaagactaactctcaataatcatagtgtatgta 10705738  T
Q  101 aattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggatt 200  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10705737 aattctgaaattgatttaacatgtagttgtttatgaatttgggaattagggttagaatatagaattgaatcgttggaagaagtaggtaatctgatggatt 10705638  T
Q  201 agggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaa 300  Q
    ||||||||| ||||||||||||||| | ||||||||| ||||||||  | |||||||||||| |||||||||||||||||||||  |||  |||||||||    
T  10705637 agggtgataaaggatgtttagattgtaaattaatcacggactaagtacccaatcagttttggagtttgggtcgatggaaattggagtttatgcttgaaaa 10705538  T
Q  301 gtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgatttttgggtggttga 369  Q
    ||| | | |||||||||||| |||| ||||||||||| ||| ||| ||||||||||||| | ||||||||    
T  10705537 gtcagaggctaaacgtttttccaaacaagagattatgggaggtttgggaaatcgattttggagtggttga 10705468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 369
Target Start/End: Complemental strand, 10919607 - 10919238
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgta 100  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||||||||||    
T  10919607 agggagaagagccaagtgaagaaccggagagatcgtagagcttcgttcgtcataattaaggtaagggtaagactaactctcaataatcatagtgtatgta 10919508  T
Q  101 aattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggatt 200  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10919507 aattctgaaattgatttaacatgtagttgtttatgaatttgggaattagggttagaatatagaattgaatcgttggaagaagtaggtaatctgatggatt 10919408  T
Q  201 agggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaa 300  Q
    ||||||||| ||||||||||||||| | ||||||||| ||||||||  | |||||||||||| |||||||||||||||||||||  |||  |||||||||    
T  10919407 agggtgataaaggatgtttagattgtaaattaatcacggactaagtacccaatcagttttggagtttgggtcgatggaaattggagtttatgcttgaaaa 10919308  T
Q  301 gtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgatttttgggtggttga 369  Q
    ||| | | |||||||||||| |||| ||||||||||| ||| ||| ||||||||||||| | ||||||||    
T  10919307 gtcagaggctaaacgtttttccaaacaagagattatgggaggtttgggaaatcgattttggagtggttga 10919238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 3 - 384
Target Start/End: Complemental strand, 6512726 - 6512344
Alignment:
Q  3 ggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaa 102  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6512726 ggagaagagccaagtgaagaaccggagagatcgtagagcttcgttgatctgaattaaggtaagggtgaggctaactctcaatagtcatagtgtatgtaaa 6512627  T
Q  103 ttctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattag 202  Q
     |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| |||| |||||||||||    
T  6512626 ctctgcaattgatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaattgtggaaagaagtagataatatgatggattag 6512527  T
Q  203 ggtgatagaggatgttta-gattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaag 301  Q
    | ||||| ||||| ||||  |||| ||||||||||||||| || |||| ||||||| ||||||||||||| |||| ||||||||||||||| |||||||     
T  6512526 gatgataaaggatatttataattgtagattaatcacagacaaaatttccaatcagtattggggtttgggttgatgaaaattgggattttcgtttgaaaaa 6512427  T
Q  302 tcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||| |||||    
T  6512426 tcggtgtctaaacg-ttttgcaaataagagattatgtgaggtttgggaaatcgatttttgggtggttgaaacttgaatttttct 6512344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 58 - 384
Target Start/End: Original strand, 20898752 - 20899077
Alignment:
Q  58 aaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaa 157  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||    
T  20898752 aaggtaagggtgaggctaactctcaataatcatagtgtatgtgaattctgaaattgatttaacatgtggttgtt-atgaatttgggaattagggttagaa 20898850  T
Q  158 tgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagt 257  Q
    ||||||||||||| || | ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||    
T  20898851 tgtagaattgaattgtggaaagaagtagataatctgatggattagggtgataaaggatgtttagattgtagattaatcacagactaagtttccaatcagt 20898950  T
Q  258 tttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcgatt 356  Q
     |||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| |||| ||||| | |||||| |||||||    
T  20898951 attggggtttgagtcgatggaaattgagattttcgtttgaaaagtcggtgtctaaacg-ttttgcaaataagtgattgtgtgaggttttggagatcgatt 20899049  T
Q  357 tttgggtggttgaaactcgaatctttct 384  Q
    |||||||||||||| || |||| |||||    
T  20899050 tttgggtggttgaagcttgaatttttct 20899077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 13 - 347
Target Start/End: Complemental strand, 3338459 - 3338129
Alignment:
Q  13 caagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatg 112  Q
    ||||||||||||   ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||   ||| | |||||||||||     
T  3338459 caagtgaagaactagagagatcgtagagcttcgtttgtcagaattaaggtaagggtgaggctaactctcaataatcata---tatatgaattctgaaatt 3338363  T
Q  113 gatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagag 212  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||    
T  3338362 gagttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaaataggtaatctgatggattaaggtgataaag 3338263  T
Q  213 gatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaa 312  Q
    ||||||||||||| ||||||||||||||||||||||| |||||| |||| | |||||||  ||| |||||||||||||||||||||||||||||||||||    
T  3338262 gatgtttagattgtagattaatcacagactaagtttccaatcag-tttgagatttgggttcatgaaaattgggattttcgcttgaaaagtcggtgtctaa 3338164  T
Q  313 acgtttttgcaaataagagattatgtgagatttgg 347  Q
    || || ||||||||||| || |||||||| |||||    
T  3338163 acattcttgcaaataagggactatgtgaggtttgg 3338129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 139 - 382
Target Start/End: Complemental strand, 16224345 - 16224102
Alignment:
Q  139 ttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcaca 238  Q
    |||||||||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  16224345 ttgggaattagggttagaatgtagaattgaattgtggaaagaagtagataatctgatggattagggtgataaaggatgtttagattgtagattaatcaca 16224246  T
Q  239 gactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgt 338  Q
    ||||||||||| ||||||| | |||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| ||||| ||||||||||||||||    
T  16224245 gactaagtttccaatcagtataggggtttgagtcgatggaaattgggattttcgtttgaatagtcggtgtctaaacg-ttttggaaataagagattatgt 16224147  T
Q  339 gagattt-ggaaatcgatttttgggtggttgaaactcgaatcttt 382  Q
    ||| ||| ||||||||| |||||||||||||||||| ||||||||    
T  16224146 gaggtttgggaaatcgagttttgggtggttgaaacttgaatcttt 16224102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 139 - 382
Target Start/End: Complemental strand, 15368496 - 15368253
Alignment:
Q  139 ttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcaca 238  Q
    |||||||||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  15368496 ttgggaattagggttagaatgtagaattgaatagtggaaagaagtagataatctgatggattagggtgataaaggatgtttagattgtagattaatcaca 15368397  T
Q  239 gactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgt 338  Q
    ||||||||||| ||||||| | |||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||| |||||||||||||| |||||||    
T  15368396 gactaagtttccaatcagtataggggtttgagtcgatggaaattgggattttcgattgaatagtcggcgtctaaacg-ttttgcaaataagaaattatgt 15368298  T
Q  339 gagatttgg-aaatcgatttttgggtggttgaaactcgaatcttt 382  Q
    ||| ||||| || ||||||||||||||||||||||| ||||||||    
T  15368297 gaggtttggcaagtcgatttttgggtggttgaaacttgaatcttt 15368253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 35 - 347
Target Start/End: Complemental strand, 15991337 - 15991026
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcata-gtgtatgtaaattctgaaatggatttaacatgtag-ttgttt 132  Q
    ||||||||| |||||||| | | | ||||||||||||||||||| |||||||| ||| |||||||||||||||||||| |||||||||||  | |||||     
T  15991337 gtagagctttgttcatca-attcatggtaagggtgaggctaactttcaataattataagtgtatgtaaattctgaaattgatttaacatgagggttgttc 15991239  T
Q  133 atgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagatta 232  Q
     ||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||| ||||||    
T  15991238 ttga-tttgggaattagggttagcatgtagaattgaatcgttggaagaagtagataatctgatggattagggtgataaatgatgtttagattgtagatta 15991140  T
Q  233 atcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagaga 332  Q
    ||||| ||||||||  | ||||||||||||||||||| |||||| |||||||   ||||| |||||||||||  || |||||| ||||||||||||||||    
T  15991139 atcacggactaagtccctaatcagttttggggtttggatcgatgaaaattggaggtttcgtttgaaaagtcgaagtataaacg-ttttgcaaataagaga 15991041  T
Q  333 ttatgtgagatttgg 347  Q
    ||||||||| |||||    
T  15991040 ttatgtgaggtttgg 15991026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 139 - 382
Target Start/End: Complemental strand, 15372005 - 15371761
Alignment:
Q  139 ttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcaca 238  Q
    |||||||||||||||||||||||||||||||| || | ||||||||| ||||||||||||||| ||||||| ||| ||||||||||| ||||||||||||    
T  15372005 ttgggaattagggttagaatgtagaattgaattgtggaaagaagtagataatctgatggattaaggtgataaagggtgtttagattgtagattaatcaca 15371906  T
Q  239 gactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgt 338  Q
    ||||||||||| ||||||| |  ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||    
T  15371905 gactaagtttccaatcagtataagggtttgagtcgatggaaattgggattttcgtttgaatagtcggtgtctaaacg-ttttgcaaataagagattatgt 15371807  T
Q  339 gagattt-ggaaatcga-tttttgggtggttgaaactcgaatcttt 382  Q
    ||| ||| ||||||||| ||||||||| ||||||||| ||||||||    
T  15371806 gaggtttgggaaatcgattttttgggtagttgaaacttgaatcttt 15371761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 139 - 382
Target Start/End: Complemental strand, 15374297 - 15374054
Alignment:
Q  139 ttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcaca 238  Q
    |||||||||||||||| ||||||||||||||| || | ||||||||| |||||||||||||||||||  || ||||||||||||||| |||||||||| |    
T  15374297 ttgggaattagggttaaaatgtagaattgaattgtggaaagaagtagataatctgatggattagggttttaaaggatgtttagattgtagattaatcata 15374198  T
Q  239 gactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgt 338  Q
    ||||||||||| ||||||| | |||||||| ||| ||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||    
T  15374197 gactaagtttccaatcagtataggggtttgagtcaatggaaattgggattttcgtttgaatagtcggtgtctaaacg-ttttgcaaataagagattatgt 15374099  T
Q  339 gagattt-ggaaatcgatttttgggtggttgaaactcgaatcttt 382  Q
    ||| ||| ||||||| |||||||||||||||||||| ||||||||    
T  15374098 gaggtttgggaaatcaatttttgggtggttgaaacttgaatcttt 15374054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 8711639 - 8711517
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgta 100  Q
    ||||||||||| |||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8711639 agggagaagagccaagtgaagaaccagagagatcgtagagcttcgttcgtcagaattaaggtaagggtgaagctaactctcaataatcatagtgtatgta 8711540  T
Q  101 aattctgaaatggatttaacatg 123  Q
    ||||||||||| |||||||||||    
T  8711539 aattctgaaattgatttaacatg 8711517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 251 - 373
Target Start/End: Complemental strand, 14281103 - 14280980
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaa 349  Q
    |||||||||| | |||||| | |||| ||||||||||||||||||||| |||||||||||||| |||||||||||| || |||||||||| | |||||||    
T  14281103 aatcagtttttgagtttggattgatgaaaattgggattttcgcttgaagagtcggtgtctaaatgtttttgcaaatgagtgattatgtgaggttttggaa 14281004  T
Q  350 atcgatttttgggtggttgaaact 373  Q
    | ||||||||||||||||||||||    
T  14281003 accgatttttgggtggttgaaact 14280980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 258 - 384
Target Start/End: Complemental strand, 18230587 - 18230461
Alignment:
Q  258 tttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaaatcgatt 356  Q
    |||||| |||| || |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||| || ||||||| ||||    
T  18230587 tttgggatttgtgttgatgaaaattgggattttcgcttgaaaactcggtgtctaaacg-ttttgcaaataagtgattatgtgaggttctggaaattgatt 18230489  T
Q  357 tttgggtggttgaaactcgaatctttct 384  Q
    ||||||||||||||||| |||| |||||    
T  18230488 tttgggtggttgaaacttgaatttttct 18230461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 29856795 - 29856676
Alignment:
Q  4 gagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaat 103  Q
    |||||||| |||||||||||||  ||| ||||||||||||||||| ||| |||||||||||||||||||||||||  ||||||| |||||||||||| ||    
T  29856795 gagaagagccaagtgaagaaccagagatatcgtagagcttcgttcgtcataattaaggtaagggtgaggctaacttccaataattatagtgtatgtagat 29856696  T
Q  104 tctgaaatggatttaacatg 123  Q
    ||| |||| |||||||||||    
T  29856695 tctaaaattgatttaacatg 29856676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 13043769 - 13043859
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttatgaatttgggaatt 147  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||  ||| ||||||||||    
T  13043769 taaggtaagggtgatgctaactctcaataatcatagtgtatgtaaactctgaaattgatttaacatgtagttgttcttgattttgggaatt 13043859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 251 - 384
Target Start/End: Original strand, 54798103 - 54798237
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaa 349  Q
    |||||||||| | |||||  | |||| ||||||||||||||||||||| |||||||||||||| ||||||||| || |  |||||||||| | |||||||    
T  54798103 aatcagtttttgagtttgaattgatgaaaattgggattttcgcttgaagagtcggtgtctaaatgtttttgcatatgactgattatgtgaggttttggaa 54798202  T
Q  350 atcgatttttgggtggttgaaactcgaatctttct 384  Q
    | |||||||||||||||||||||| |||| |||||    
T  54798203 accgatttttgggtggttgaaactggaatttttct 54798237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 254 - 347
Target Start/End: Original strand, 9870648 - 9870740
Alignment:
Q  254 cagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    |||||||||||||| | | |||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||    
T  9870648 cagttttggggtttagtt-gatgaaaattgagattttcgcttgaaaagtcggtgtctaaacgtttttgcaagtaagggattatgtgaggtttgg 9870740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 265 - 384
Target Start/End: Complemental strand, 22354518 - 22354399
Alignment:
Q  265 tttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcgatttttgggt 363  Q
    ||||||| |||| ||| ||| ||||||||||||| | |||||||||||||| ||||||||||||| |||||||||| | |||||||| ||||||||||||    
T  22354518 tttgggttgatgaaaactggaattttcgcttgaagattcggtgtctaaacg-ttttgcaaataagtgattatgtgaggttttggaaaccgatttttgggt 22354420  T
Q  364 ggttgaaactcgaatctttct 384  Q
    |||| ||||| |||| |||||    
T  22354419 ggtttaaacttgaatttttct 22354399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 384
Target Start/End: Original strand, 2584344 - 2584475
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaa 349  Q
    |||||||||||||||| ||||  ||| ||||||| ||||  | |||||||||||||||| || |||||| ||||||||| ||||||||||| || |||||    
T  2584344 aatcagttttggggtt-gggttaatgaaaattggaatttatgtttgaaaagtcggtgtccaa-cgtttt-gcaaataagtgattatgtgaggttctggaa 2584440  T
Q  350 atcgatttttgggtggttgaaactcgaatctttct 384  Q
    |||||||||||||||||||||||| |||| |||||    
T  2584441 atcgatttttgggtggttgaaacttgaatttttct 2584475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 251 - 384
Target Start/End: Original strand, 4830357 - 4830488
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaa 349  Q
    |||||||||||||||| ||||  ||| ||||||| ||||  | |||||||||||||||| || |||||| ||||||||| ||||||||||| || |||||    
T  4830357 aatcagttttggggtt-gggttaatgaaaattggaatttatgtttgaaaagtcggtgtccaa-cgtttt-gcaaataagtgattatgtgaggttctggaa 4830453  T
Q  350 atcgatttttgggtggttgaaactcgaatctttct 384  Q
    ||| |||||||||||||||||||| |||| |||||    
T  4830454 atcaatttttgggtggttgaaacttgaatttttct 4830488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 251 - 384
Target Start/End: Original strand, 4833652 - 4833783
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaa 349  Q
    |||||||||||||||| ||||  ||| ||||||| ||||  | |||||||||||||||| || |||||| ||||||||| ||||||||||| || |||||    
T  4833652 aatcagttttggggtt-gggttaatgaaaattggaatttatgtttgaaaagtcggtgtccaa-cgtttt-gcaaataagtgattatgtgaggttctggaa 4833748  T
Q  350 atcgatttttgggtggttgaaactcgaatctttct 384  Q
    ||| |||||||||||||||||||| |||| |||||    
T  4833749 atcaatttttgggtggttgaaacttgaatttttct 4833783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 251 - 384
Target Start/End: Complemental strand, 13447382 - 13447251
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttg-gaa 349  Q
    |||||||||||||||| ||||  ||| |||||| ||||||| |||||| ||||| ||||||| ||||||  |||||||| ||||||||||| |||  |||    
T  13447382 aatcagttttggggtt-gggttaatgaaaattgagattttcccttgaagagtcgatgtctaa-cgtttta-caaataagcgattatgtgaggttttagaa 13447286  T
Q  350 atcgatttttgggtggttgaaactcgaatctttct 384  Q
    |||||||||||||||||||||||| |||| |||||    
T  13447285 atcgatttttgggtggttgaaacttgaatttttct 13447251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 15344983 - 15344922
Alignment:
Q  62 taagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatg 123  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||    
T  15344983 taagggtgaggctaactttcaataattatagtgtatgtaaattctgaaattgatttaacatg 15344922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 15447355 - 15447442
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatg 123  Q
    ||||||||| ||||||| ||  ||||||||| |||||||||||| |||||||| |||||||||||||||||||||||  ||||||||||    
T  15447355 gtagagctttgttcatc-gatctaaggtaagagtgaggctaactttcaataattatagtgtatgtaaattctgaaatttatttaacatg 15447442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 276 - 382
Target Start/End: Complemental strand, 15403370 - 15403265
Alignment:
Q  276 ggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttggaaatcgatttttgggtggttgaaactcg 375  Q
    ||||| ||||||||||| ||||| |||||| |||||||||||||  ||| ||||| |||||||||| || | || ||||||||||||||| ||||||| |    
T  15403370 ggaaaatgggattttcgattgaatagtcggcgtctaaacgttttc-caattaagaaattatgtgagtttggcaattcgatttttgggtgggtgaaacttg 15403272  T
Q  376 aatcttt 382  Q
    |||||||    
T  15403271 aatcttt 15403265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 384
Target Start/End: Complemental strand, 27028598 - 27028467
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg-aa 349  Q
    |||||||||||||||| ||||  ||| ||||||||||||  | |||||| || |||||| || |||||| ||||||||| ||| ||||||| ||||| ||    
T  27028598 aatcagttttggggtt-gggttaatgaaaattgggatttatgtttgaaaggttggtgtccaa-cgtttt-gcaaataagggatcatgtgagttttgggaa 27028502  T
Q  350 atcgatttttgggtggttgaaactcgaatctttct 384  Q
    ||| |||||||||||||||||||| |||| |||||    
T  27028501 atcaatttttgggtggttgaaacttgaatttttct 27028467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 27028798 - 27028730
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatgga-tttaacatgt 124  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||||| |||| || ||||||||||    
T  27028798 taaggtaagggtgaggctaactttcaatatttatagtgtatgtaaattctaaaattgagtttaacatgt 27028730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 45006015 - 45005943
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaa 109  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||  ||| |||||||||||||  |||||||||||    
T  45006015 gtagagctttgttcatctgaattaaggtaagggtgatgctaacattcagtaatcatagtgta--taaattctgaa 45005943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 16157647 - 16157538
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttc-gcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-gga 348  Q
    |||||||||||||||| ||||| ||| ||||||||| |||  | ||||||||| |||||| || |||||| ||||||||||||| ||||||| ||| |||    
T  16157647 aatcagttttggggtt-gggtcaatgaaaattgggactttatgtttgaaaagttggtgtccaa-cgtttt-gcaaataagagatgatgtgagttttggga 16157551  T
Q  349 aatcgatttttgg 361  Q
    |||||||||||||    
T  16157550 aatcgatttttgg 16157538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8711691 - 8711652
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagag 40  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  8711691 agggagaagagtcaagtgaagaaccgtagagatcgtagag 8711652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 13888700 - 13888657
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaataatcatagtgtat 97  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  13888700 aattaaggtaagggtgaggctaactctcaatgatcataatgtat 13888657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 38979933 - 38979976
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaact 78  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||    
T  38979933 gtagagctttgttcatctgaattaaggtaagggtgaggctaact 38979976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 8834955 - 8834917
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcata 91  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  8834955 gaattaaggtaagggtgaggctaactctcaatgatcata 8834917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 33849823 - 33849780
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaact 78  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||    
T  33849823 gtagagctttgttcatctgaattaaggtaagggtgatgctaact 33849780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 84
Target Start/End: Complemental strand, 15245274 - 15245244
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaat 84  Q
    |||||||||||||||||||||||||||||||    
T  15245274 aattaaggtaagggtgaggctaactctcaat 15245244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 15747545 - 15747587
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataat 87  Q
    |||||||| || ||||||||||||||| |||||||||||||||    
T  15747545 gttcatcaaaactaaggtaagggtgagactaactctcaataat 15747587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 16370702 - 16370763
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtat 97  Q
    ||||||||| |||||||| | | |||||||||||||| |||||||||||| || |||||||||    
T  16370702 gtagagctttgttcatca-attcaaggtaagggtgagactaactctcaatgataatagtgtat 16370763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 17143294 - 17143260
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataat 87  Q
    ||||||||||||||||||| |||||||||||||||    
T  17143294 gaattaaggtaagggtgagactaactctcaataat 17143260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 13447584 - 13447507
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaat--ggatttaacatgtagttgtt 131  Q
    |||||||||||| |||||||||||  ||| |||||||||||||  ||||||||||| |   |||||||||||| ||||||    
T  13447584 aattaaggtaagagtgaggctaacattcagtaatcatagtgta--taaattctgaatttgtgatttaacatgttgttgtt 13447507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 322 - 373
Target Start/End: Original strand, 4615319 - 4615371
Alignment:
Q  322 caaataagagattatgtgagatttgg-aaatcgatttttgggtggttgaaact 373  Q
    ||||||| |||||||||||| ||||| ||||| |||||| |||||||||||||    
T  4615319 caaataaaagattatgtgaggtttgggaaatcaatttttaggtggttgaaact 4615371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 4830146 - 4830198
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtat 97  Q
    |||||||| || ||||||||| |||||||||||  ||| ||||||||||||||    
T  4830146 gttcatcaaaactaaggtaagtgtgaggctaacattcagtaatcatagtgtat 4830198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 4833441 - 4833493
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtat 97  Q
    |||||||| || ||||||||| |||||||||||  ||| ||||||||||||||    
T  4833441 gttcatcaaaactaaggtaagtgtgaggctaacattcagtaatcatagtgtat 4833493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 13878853 - 13878803
Alignment:
Q  33 tcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaata 85  Q
    ||||||||||| |||||||| | | ||||||||||||||||||||||||||||    
T  13878853 tcgtagagctt-gttcatca-attcaaggtaagggtgaggctaactctcaata 13878803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 13882458 - 13882408
Alignment:
Q  33 tcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaata 85  Q
    ||||||||||| |||||||| | | ||||||||||||||||||||||||||||    
T  13882458 tcgtagagctt-gttcatca-attcaaggtaagggtgaggctaactctcaata 13882408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 15408194 - 15408158
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  15408194 taaggtaagggtgagactatctctcaataatcatagt 15408158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 15712674 - 15712769
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaat--ggatttaacatgtagttgtt 131  Q
    ||||||||| ||||||| ||  ||||||||||||||| |||||  ||| |||||||||||||  ||||||||||| |   |||||||||||| ||||||    
T  15712674 gtagagctttgttcatc-gatctaaggtaagggtgagactaacattcagtaatcatagtgta--taaattctgaatttgtgatttaacatgttgttgtt 15712769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 18230791 - 18230755
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagt 93  Q
    |||||||||||||||||||||||||||| || |||||    
T  18230791 taaggtaagggtgaggctaactctcaatgattatagt 18230755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 24046468 - 24046516
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    |||||||| || ||||||||| |||||||||||||||||| || |||||    
T  24046468 gttcatcaaaactaaggtaagtgtgaggctaactctcaatgattatagt 24046516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 28386316 - 28386221
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaat--ggatttaacatgtagttgtt 131  Q
    ||||||||| ||||||| ||  ||||||||||||||| |||||  ||| |||||||||||||  ||||||||||| |   |||||||||||| ||||||    
T  28386316 gtagagctttgttcatc-gatctaaggtaagggtgagactaacattcagtaatcatagtgta--taaattctgaatttgtgatttaacatgttgttgtt 28386221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 32490812 - 32490765
Alignment:
Q  37 agagcttcgttcatcagaattaaggtaagggtgaggctaactctcaata 85  Q
    ||||||| |||||||| ||| |||||||||||||| |||||||||||||    
T  32490812 agagctttgttcatca-aatcaaggtaagggtgagactaactctcaata 32490765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 56114762 - 56114798
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagt 93  Q
    |||||||||||||||||||||||||||| || |||||    
T  56114762 taaggtaagggtgaggctaactctcaatgattatagt 56114798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 13 - 384
Target Start/End: Original strand, 1956 - 2328
Alignment:
Q  13 caagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatg 112  Q
    |||||||||| | | ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  1956 caagtgaagagctggagagatcgtagagcttcgttcatctaaattaaggtaagggtgaggctaactctcaataatcatagtgtatgcaaattctgaaatt 2055  T
Q  113 gatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagag 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||  ||    
T  2056 gatttaacatgtagttgtttatggatttgggaattagggttagaatgtagaattgaattgtgggaagaagtaggtaatatgatggattagggtgattaag 2155  T
Q  213 gatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaa 312  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||| ||||  |||||||||||||  ||||||    
T  2156 gatgtttagattgcagattaatgacagactaagtttccaatcagttttggggtttgggttgatggaaattggaatttatgcttgaaaagtcgaagtctaa 2255  T
Q  313 acgtttttgcaaataagagattatgtgagattt-ggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    ||||||||| ||||||||||||||||||| ||| ||||||| |||||| ||||||||||||| |||| |||||    
T  2256 acgtttttgaaaataagagattatgtgaggtttgggaaatcaatttttaggtggttgaaacttgaatttttct 2328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 246; Significance: 1e-136; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 4 - 384
Target Start/End: Complemental strand, 3992 - 3613
Alignment:
Q  4 gagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaat 103  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  3992 gagaagagccaagtgaagaaccggagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtgaat 3893  T
Q  104 tctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagg 203  Q
    |||||||| |||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||| || | ||||||||| |||||||||||||||||    
T  3892 tctgaaattgatttaacatgtggttgtt-atgaatttgggaattagggttagaatatagaattgaattgtggaaagaagtagataatctgatggattagg 3794  T
Q  204 gtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtc 303  Q
    ||||||  |||||||||||||| ||||||||||||||||||||||| || |||| |||||||||| ||||||| ||||||||||||||| ||||||||||    
T  3793 gtgataagggatgtttagattgtagattaatcacagactaagtttccaaccagtattggggtttgagtcgatgtaaattgggattttcgtttgaaaagtc 3694  T
Q  304 ggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    |||||||||||| ||||||||||||| |||| ||||| | |||  | | |||||||||||||||||||||| |||| |||||    
T  3693 ggtgtctaaacg-ttttgcaaataagtgattgtgtgaggttttatacaacgatttttgggtggttgaaacttgaatttttct 3613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 40532 - 40568
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  40532 taaggtaagggtgagactatctctcaataatcatagt 40568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 245; Significance: 1e-135; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 57 - 384
Target Start/End: Original strand, 616 - 944
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttaga 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  616 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaattgatttaacatgtagttgtttatgaatttgggaattagggttaga 715  T
Q  157 atgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcag 256  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | || |||    
T  716 atgaagaattgaatcgttggaagaagtaggtaatctgatggattagggtgataaaggatgtttagattgcagattaatcacagactaagttcccaaccag 815  T
Q  257 ttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgat 355  Q
    |||||||||||||||||||||||||||| ||||  | ||||||||| || ||||||||||||||||||| ||||||||||||||| ||| |||||| |||    
T  816 ttttggggtttgggtcgatggaaattggaatttatgtttgaaaagttggagtctaaacgtttttgcaaacaagagattatgtgaggtttgggaaatagat 915  T
Q  356 ttttgggtggttgaaactcgaatctttct 384  Q
    |||| | ||||||||||| |||| |||||    
T  916 ttttagttggttgaaacttgaatttttct 944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 233; Significance: 1e-128; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 57 - 384
Target Start/End: Original strand, 25521 - 25849
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttaga 156  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25521 taaggtaagggtgaggctaactctcaataatcatagtgtatgtgaattcggaaattgatttaacatgtagttgtttatgaatttgggaattagggttaga 25620  T
Q  157 atgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcag 256  Q
    |||||||||||||| || || |||||||||||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||||||| ||| ||    
T  25621 atgtagaattgaattgtgggtagaagtaggtaatctgatggattatggtgattaaggatgtttagattgtagattaatcacagactaagtttccaattag 25720  T
Q  257 ttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcgat 355  Q
    |||||||||||||||||||||||||||| | ||  |||||||||||||  |||||||||||||||||||||||||||||||||| | |||||||||||||    
T  25721 ttttggggtttgggtcgatggaaattggaaattatgcttgaaaagtcgaagtctaaacgtttttgcaaataagagattatgtgaggttttggaaatcgat 25820  T
Q  356 ttttgggtggttgaaactcgaatctttct 384  Q
    |||| ||||||||||||| |||| |||||    
T  25821 tttttggtggttgaaacttgaatttttct 25849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 233; Significance: 1e-128; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 35 - 362
Target Start/End: Complemental strand, 21245753 - 21245426
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttat 134  Q
    ||||||||| |||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21245753 gtagagctttgttcatca-attcaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaattgatttaacatgtagttgtttat 21245655  T
Q  135 gaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaat 234  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||| ||    
T  21245654 gaatttgggaattagggttagcatgtagaattgaatcgttagaagaagtagataatctgatggattagggtgataaaggatgtttagattgtagattgat 21245555  T
Q  235 cacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagatt 334  Q
    |||| |||||||| | ||||||||||||||||||||||||||||| |||| ||||  |||||||||||||| ||||||||||||||||||| ||||||||    
T  21245554 cacaaactaagttcccaatcagttttggggtttgggtcgatggaagttggaatttaagcttgaaaagtcggagtctaaacgtttttgcaaacaagagatt 21245455  T
Q  335 atgtgagattt-ggaaatcgatttttggg 362  Q
    ||||||| ||| |||||||||||||||||    
T  21245454 atgtgaggtttgggaaatcgatttttggg 21245426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 35 - 362
Target Start/End: Original strand, 24273013 - 24273341
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggattt-aacatgtagttgttta 133  Q
    ||||||||| |||||||| | | ||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||| ||||||||||||||||    
T  24273013 gtagagctttgttcatca-attcaaggtaagggtgaggctaactctcaataatcttagtgtatgaaaattctgaaattgattttaacatgtagttgttta 24273111  T
Q  134 tgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaa 233  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| |||||||| ||||| |    
T  24273112 tgaatttgagaattagggttagcatgtagaattgaatcgttggaagaagttggtaatatgatggattagggtgataaaggatgcttagattgtagattga 24273211  T
Q  234 tcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagat 333  Q
    |||||||||||||| | ||||||||||||||||||||||||||||| |||| ||||  |||||||||||||| ||||||||||||||||||| |||||||    
T  24273212 tcacagactaagttcccaatcagttttggggtttgggtcgatggaagttggaatttaagcttgaaaagtcggagtctaaacgtttttgcaaacaagagat 24273311  T
Q  334 tatgtgagattt-ggaaatcgatttttggg 362  Q
    |||||||| ||| || ||||||||||||||    
T  24273312 tatgtgaggtttggggaatcgatttttggg 24273341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 58 - 347
Target Start/End: Complemental strand, 26904451 - 26904164
Alignment:
Q  58 aaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaa 157  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26904451 aaggtaagggtgatgctaactctcaataatcatagtgtatgtaaattctgaaattgatttaacatgtagttgtttatgaatttgggaattagggttagaa 26904352  T
Q  158 tgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagt 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||  ||||||||  | |||||||    
T  26904351 tgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgataaagggtgtttagattgtagattaatcatggactaagtccctaatcagt 26904252  T
Q  258 tttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    |||||||||||||| ||||| ||||||  |||||| |||||||||||  || |||||| ||||||||||||||||||||||||| |||||    
T  26904251 tttggggtttgggttgatgg-aattggagttttcgtttgaaaagtcgaagtataaacg-ttttgcaaataagagattatgtgaggtttgg 26904164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 35 - 347
Target Start/End: Complemental strand, 28350228 - 28349925
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtag-ttgttta 133  Q
    ||||||||| |||||||| | | |||||||||||||| |||||| ||| ||||  |||||||||||||||||||||| |||||||||||  | |||||      
T  28350228 gtagagctttgttcatca-attcaaggtaagggtgagtctaactttcattaattttagtgtatgtaaattctgaaattgatttaacatgagggttgttct 28350130  T
Q  134 tgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaa 233  Q
    ||| ||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||| || |||||||    
T  28350129 tga-tttgggaattagggttagcgtgtagaattgaatcgttggaagaagtagataatctgatggattagggtgataaaagatgtttagactgtagattaa 28350031  T
Q  234 tcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagat 333  Q
    |||| ||||||||  | |||||||||       ||||||||||||||||||   ||| | |||||||||||   | |||||| |||||||||||||||||    
T  28350030 tcacggactaagtccctaatcagttt-------tgggtcgatggaaattggaggttttgtttgaaaagtcgaaatataaacg-ttttgcaaataagagat 28349939  T
Q  334 tatgtgagatttgg 347  Q
    |||||||| |||||    
T  28349938 tatgtgaggtttgg 28349925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 204 - 384
Target Start/End: Original strand, 6477385 - 6477563
Alignment:
Q  204 gtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtc 303  Q
    |||||| ||||||||||||||| |||||||||| || ||||  ||| |||||||||||||||| ||||  |||||||||||||||||| |||||||||||    
T  6477385 gtgataaaggatgtttagattgtagattaatcatagtctaatgttccaatcagttttggggtt-gggttaatggaaattgggattttcccttgaaaagtc 6477483  T
Q  304 ggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    ||||||||||||  |||||||||||| |||||||||| | ||||||||||||||||||||||||||||||| |||| |||||    
T  6477484 ggtgtctaaacg--tttgcaaataagcgattatgtgaggttttggaaatcgatttttgggtggttgaaacttgaatttttct 6477563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 230 - 384
Target Start/End: Complemental strand, 22703851 - 22703696
Alignment:
Q  230 ttaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattggga-ttttcgcttgaaaagtcggtgtctaaacgtttttgcaaataa 328  Q
    ||||||| |||||||||||| ||||||| ||||||||||||| |||||||||||||| |||||| ||||||| | |||||||||||| ||||||||||||    
T  22703851 ttaatcatagactaagtttccaatcagtattggggtttgggttgatggaaattgggatttttcgtttgaaaaattggtgtctaaacg-ttttgcaaataa 22703753  T
Q  329 gagattatgtgagatt-tggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    | ||||||||||| || ||||||||||||||||||||||||||||| |||| |||||    
T  22703752 gtgattatgtgaggttctggaaatcgatttttgggtggttgaaacttgaatttttct 22703696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 43706997 - 43707119
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgta 100  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||||  |||||||||| ||||||||||  |||||| |||||||| ||||||||||||    
T  43706997 agggagaagagccaagtgaagaatcggagagatcgtagagcttcgtttgtcagaattaatgtaagggtgatactaactttcaataattatagtgtatgta 43707096  T
Q  101 aattctgaaatggatttaacatg 123  Q
    ||||||||||| |||||||||||    
T  43707097 aattctgaaattgatttaacatg 43707119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 254 - 384
Target Start/End: Complemental strand, 19358740 - 19358606
Alignment:
Q  254 cagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttggaaatcg 353  Q
    ||||||||||||||||||  ||| |||||| ||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  19358740 cagttttggggtttgggttaatgaaaattgagattttcgcttgaaacgttggtgtctaaacgtttttgcaaataagggattatgtgaggtttggaaatcg 19358641  T
Q  354 at----ttttgggtggttgaaactcgaatctttct 384  Q
    ||    |||||||||||||||||| |||| |||||    
T  19358640 atttttttttgggtggttgaaacttgaatttttct 19358606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 22704083 - 22703989
Alignment:
Q  3 ggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtat 97  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||  | | ||||||||||||||    
T  22704083 ggagaagagccaagtgaagaaccggagagatcgtagagcttcgttcatctgaattaaggtaagggtgaggctaacatttagtaatcatagtgtat 22703989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 283 - 384
Target Start/End: Original strand, 24087798 - 24087899
Alignment:
Q  283 gggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcgatttttgggtggttgaaactcgaatctt 381  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| | ||||||||| ||||||||||| ||||||||| |||| ||    
T  24087798 gggattttcgcttgaaaagtcggtgtctaaacg-ttttgcaaataagtgattatgtgaggttttggaaatagatttttgggtagttgaaacttgaatgtt 24087896  T
Q  382 tct 384  Q
    |||    
T  24087897 tct 24087899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 43707253 - 43707335
Alignment:
Q  265 tttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    |||||||  ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  43707253 tttgggttcatgaaaattgggattttcgcttgaaaggtcggtgtctaaacgtttttgcaaataagtgattatgtgaggtttgg 43707335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 31521218 - 31521155
Alignment:
Q  60 ggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatg 123  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||    
T  31521218 ggtaagggtgaggctaactttcaataattatagtgtatgtaaattctgaaattgatttaacatg 31521155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 283 - 383
Target Start/End: Original strand, 45617836 - 45617937
Alignment:
Q  283 gggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaaatcgatttttgggtggttgaaactcgaatctt 381  Q
    ||||||||||  ||||||||| |||| ||| | |||||||||||||| ||||||||||| || |||||||||||||| |||||| ||||||| |||| ||    
T  45617836 gggattttcgtgtgaaaagtccgtgtataagcatttttgcaaataagcgattatgtgaggttctggaaatcgattttagggtgggtgaaacttgaatttt 45617935  T
Q  382 tc 383  Q
    ||    
T  45617936 tc 45617937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 22790275 - 22790327
Alignment:
Q  71 ggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatg 123  Q
    ||||||||  |||||||||||||||||||| |||||||||| |||||||||||    
T  22790275 ggctaacttccaataatcatagtgtatgtagattctgaaattgatttaacatg 22790327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 20590254 - 20590297
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaact 78  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||    
T  20590254 gtagagctttgttcatctgaattaaggtaagggtgaggctaact 20590297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 23338371 - 23338414
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaact 78  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||    
T  23338371 gtagagctttgttcatctgaattaaggtaagggtgaggctaact 23338414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 21072677 - 21072763
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaat--ggatttaacatgtagttgtt 131  Q
    |||||||| || |||||||||||||||||||||  ||| |||||||||||||  ||||||||||| |   |||||||||||| ||||||    
T  21072677 gttcatcaaaactaaggtaagggtgaggctaacattcagtaatcatagtgta--taaattctgaatttgtgatttaacatgttgttgtt 21072763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 41300918 - 41301004
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaat--ggatttaacatgtagttgtt 131  Q
    |||||||| || |||||||||||||||||||||  ||| |||||||||||||  ||||||||||| |   |||||||||||| ||||||    
T  41300918 gttcatcaaaactaaggtaagggtgaggctaacattcagtaatcatagtgta--taaattctgaatttgtgatttaacatgttgttgtt 41301004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 23149706 - 23149625
Alignment:
Q  4 gagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaata 85  Q
    |||||||| ||||||||| |||  |||||| ||||| | | |||| || |||||||||||||||||||| | ||||||||||    
T  23149706 gagaagagccaagtgaaggaccagagagattgtagaacgttgttcgtctgaattaaggtaagggtgaggtttactctcaata 23149625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 23561496 - 23561415
Alignment:
Q  4 gagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaata 85  Q
    |||||||| ||||||||| |||  |||||| ||||| | | |||| || |||||||||||||||||||| | ||||||||||    
T  23561496 gagaagagccaagtgaaggaccagagagattgtagaacgttgttcgtctgaattaaggtaagggtgaggtttactctcaata 23561415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 23265201 - 23265161
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  23265201 gaattaaggtaagggtgagactatctctcaataatcatagt 23265161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 23280269 - 23280229
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  23280269 gaattaaggtaagggtgagactatctctcaataatcatagt 23280229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 6477216 - 6477277
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtat 97  Q
    ||||||||| |||||||| | | ||||||||||||||||||||  ||| ||||||||||||||    
T  6477216 gtagagctttgttcatca-attcaaggtaagggtgaggctaacattcagtaatcatagtgtat 6477277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 6483784 - 6483738
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcata 91  Q
    |||||||  |||||||||||||||||| ||| |||||||||||||||    
T  6483784 gttcatctaaattaaggtaagggtgagactatctctcaataatcata 6483738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 6487251 - 6487205
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcata 91  Q
    |||||||  |||||||||||||||||| ||| |||||||||||||||    
T  6487251 gttcatctaaattaaggtaagggtgagactatctctcaataatcata 6487205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 10039040 - 10039097
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||| |||||||| | | ||||||||||||||||||||||||||| || |||||    
T  10039040 gtagagctttgttcatca-attcaaggtaagggtgaggctaactctcaatgattatagt 10039097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 21908418 - 21908381
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcat 90  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  21908418 gaattaaggtaagggtgagactatctctcaataatcat 21908381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 24661635 - 24661598
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaataatcata 91  Q
    |||||||||||||||||||||||||||| || ||||||    
T  24661635 aattaaggtaagggtgaggctaactctcgatgatcata 24661598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 22110608 - 22110558
Alignment:
Q  33 tcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaata 85  Q
    ||||||||||| |||||||| | | ||||||||||||||||||||||||||||    
T  22110608 tcgtagagctt-gttcatca-attcaaggtaagggtgaggctaactctcaata 22110558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 231; Significance: 1e-127; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 33 - 382
Target Start/End: Complemental strand, 60497 - 60150
Alignment:
Q  33 tcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgttt 132  Q
    ||||||||||| |||||||| | | |||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  60497 tcgtagagctt-gttcatca-attcaaggtaagggtgagactaactctcaataatcatagtgtatgtaaactctgaaattgatttaacatgtagttgttt 60400  T
Q  133 atgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagatta 232  Q
    |||||||||||||||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| | ||||||||||||| ||||||    
T  60399 atgaatttgggaattagggttagaatgtagaattgaattgtggaaagaagtagataatctgatggattagggtgataaaagatgtttagattgtagatta 60300  T
Q  233 atcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagaga 332  Q
    |||| |||||||||||| ||||||| || |||||||||| |||||||||||||||||||| ||||||| |||||| ||||||| ||||||||||||||||    
T  60299 atcatagactaagtttccaatcagtattcgggtttgggttgatggaaattgggattttcgtttgaaaaatcggtgactaaacg-ttttgcaaataagaga 60201  T
Q  333 ttatgtgagattt-ggaaatcgatttttgggtggttgaaactcgaatcttt 382  Q
    ||||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  60200 ttatgtgaggtttgggaaatcgatttttgggtggttgaaacttgaatcttt 60150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 251 - 384
Target Start/End: Complemental strand, 75645 - 75511
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaa 349  Q
    ||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||    
T  75645 aatcagttttggggtttgggttgatgaaaatttggatttttgcttgaaaagtcggtgtctaaacgtttttgcaaataagtgattatgtgaggttctggaa 75546  T
Q  350 atcgatttttgggtggttgaaactcgaatctttct 384  Q
    | |||||||||||||||||||||| |||| |||||    
T  75545 accgatttttgggtggttgaaacttgaatttttct 75511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 204294 - 204416
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgta 100  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||     
T  204294 agggcgaagagccaagtgaagaaccggagagatcgtagagcttcgttcgtctgaattaaggtaagggtgaggctaactcccaataatcatagtgtatgtg 204393  T
Q  101 aattctgaaatggatttaacatg 123  Q
    ||||||||||| |||||||||||    
T  204394 aattctgaaattgatttaacatg 204416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 251 - 373
Target Start/End: Complemental strand, 72797 - 72675
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaa 349  Q
    |||||||||||| |||||||| ||||  |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||    
T  72797 aatcagttttggcgtttgggttgatgataattgg-attttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagtgattatgtgaggttctggaa 72699  T
Q  350 atcgatttttgggtggttgaaact 373  Q
    | ||||||||||||||||||||||    
T  72698 accgatttttgggtggttgaaact 72675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 116954 - 116915
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  116954 aattaaggtaagggtgagactatctctcaataatcatagt 116915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 225; Significance: 1e-124; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 35 - 358
Target Start/End: Complemental strand, 7921 - 7598
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttat 134  Q
    ||||||||| |||||||| | | || ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  7921 gtagagctttgttcatca-attcaatgtaagggtgaggctaactctcaataatcatagtgtatgtgaattctgaaattgatttaacatgtagttgtttat 7823  T
Q  135 gaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaat 234  Q
    |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7822 gaatatgagaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgataaaggatgtttagattgcagattaat 7723  T
Q  235 cacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagatt 334  Q
    ||| ||||||||| | ||||| |||||||||||||||||||||||||| |  |||  |||||||||||||| ||||||||||||||||||| ||||||||    
T  7722 cacggactaagttcccaatcaattttggggtttgggtcgatggaaatttgagtttatgcttgaaaagtcggagtctaaacgtttttgcaaacaagagatt 7623  T
Q  335 atgtgagatttgg-aaatcgatttt 358  Q
    ||||||| ||||| |||||||||||    
T  7622 atgtgaggtttggtaaatcgatttt 7598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 35 - 358
Target Start/End: Complemental strand, 12535 - 12212
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttat 134  Q
    ||||||||| |||||||| | | || ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  12535 gtagagctttgttcatca-attcaatgtaagggtgaggctaactctcaataatcatagtgtatgtgaattctgaaattgatttaacatgtagttgtttat 12437  T
Q  135 gaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaat 234  Q
    |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12436 gaatatgagaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgataaaggatgtttagattgcagattaat 12337  T
Q  235 cacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagatt 334  Q
    ||| ||||||||| | ||||| |||||||||||||||||||||||||| |  |||  |||||||||||||| ||||||||||||||||||| ||||||||    
T  12336 cacggactaagttcccaatcaattttggggtttgggtcgatggaaatttgagtttatgcttgaaaagtcggagtctaaacgtttttgcaaacaagagatt 12237  T
Q  335 atgtgagatttgg-aaatcgatttt 358  Q
    ||||||| ||||| |||||||||||    
T  12236 atgtgaggtttggtaaatcgatttt 12212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 35 - 358
Target Start/End: Complemental strand, 10530 - 10207
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttat 134  Q
    ||||||||| |||||||| | | || ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  10530 gtagagctttgttcatca-attcaatgtaagggtgaggctaactctcaataatcatagtgtatgtgaattctgaaattgatttaacatgtagttgtttat 10432  T
Q  135 gaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaat 234  Q
    |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10431 gaatatgagaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgataaaggatgtttagattgcagattaat 10332  T
Q  235 cacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagatt 334  Q
    ||| ||||||||| | ||||| |||||||||||||||||||||||||| |  |||  |||||||||||||| ||||||||||||||||||| ||||||||    
T  10331 cacggactaagttcccaatcaattttggggtttgggtcgatggaaatttgagtttatgcttgaaaagtcggagtctaaacgtttttgcaaacaagagatt 10232  T
Q  335 atgtgagatttgg-aaatcgatttt 358  Q
    ||||||| ||||| |||||||||||    
T  10231 atgtgaggtttggtaaatcgatttt 10207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 196; Significance: 1e-106; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 161 - 384
Target Start/End: Complemental strand, 1133 - 910
Alignment:
Q  161 agaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagtttt 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||| ||||    
T  1133 agaattgaatcgttggaagaagtaggtaatctgatggattagggtgataaaggatgtttagattgtagattaatcacagactaagtttctaatcaatttt 1034  T
Q  261 ggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttggaaatcgatttttg 360  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1033 ggggtttgggtcgatggaaattgggattttcacttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgaggtttggaaatcgatttttg 934  T
Q  361 ggtggttgaaactcgaatctttct 384  Q
    ||||||||||||| ||||||||||    
T  933 ggtggttgaaacttgaatctttct 910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 58 - 347
Target Start/End: Complemental strand, 52254 - 51966
Alignment:
Q  58 aaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttatgaatttgggaattagggttagaa 157  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |    
T  52254 aaggtaagagtgaggctaactctcaataatcatagtgtatgtaaattctgaaattgatttaacatgtagttgtttatgaatttgagaattagggttagca 52155  T
Q  158 tgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagt 257  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||| ||||| |||| ||| |||||| | ||||| |    
T  52154 tgtagaattgaatcgttggaagaaataggtaatatgatggattagggtgataaaggatgtttagattgtagattgatcatagattaagttcccaatcaat 52055  T
Q  258 tttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    ||||||||||| |||||||||||||||  |||||| |||||||||||  || |||||| ||||||||||||||||||||||||| |||||    
T  52054 tttggggtttgagtcgatggaaattggagttttcgtttgaaaagtcgaagtataaacg-ttttgcaaataagagattatgtgaggtttgg 51966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 180; Significance: 6e-97; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 56 - 365
Target Start/End: Complemental strand, 7097 - 6787
Alignment:
Q  56 ttaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtag-ttgtttatgaatttgggaattagggtta 154  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||||||| |||| |||||||||||  | |||||  ||| ||| |||||||||||||    
T  7097 ttaaggtaagggtgaggctaactttcaataaatatagtgtatgtaaattctaaaattgatttaacatgagggttgttcttga-tttcggaattagggtta 6999  T
Q  155 gaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatc 254  Q
    | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||| ||||||||| | ||||    
T  6998 gcatggagaattgaatcgttggaagaagtaggtaatctgatggattagggtgataaaggatgtttagattgtagattaaccacggactaagttcccaatc 6899  T
Q  255 agttttggggtttgggtcgatggaaattg-ggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttggaaatcg 353  Q
    |||||||||||||||||||||||||||||   ||||  |||||||||||||| |||||||||||||| |||| ||||||||||||||| |||||||||||    
T  6898 agttttggggtttgggtcgatggaaattgcaaatttatgcttgaaaagtcggagtctaaacgtttttccaaacaagagattatgtgaggtttggaaatcg 6799  T
Q  354 atttttgggtgg 365  Q
    ||||| ||||||    
T  6798 attttggggtgg 6787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 177; Significance: 4e-95; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 141 - 384
Target Start/End: Complemental strand, 4080 - 3836
Alignment:
Q  141 gggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacaga 240  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||    
T  4080 gggaattagggttagaatgtagaattgaatcgttggaagatgtaggtaatctgatggattagggtgataaatgatgtttagattgaagattaatcacaga 3981  T
Q  241 ctaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga 340  Q
    ||||||||| |||||||||||||||||||| | ||||||||||| ||||  |||||||||||||| |||| |||||||||||||||||||||||||||||    
T  3980 ctaagtttccaatcagttttggggtttgggccaatggaaattggaatttatgcttgaaaagtcggagtctgaacgtttttgcaaataagagattatgtga 3881  T
Q  341 gattt-ggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
    | ||| ||||||||||||| |||||||||||||| ||||||||||    
T  3880 ggtttgggaaatcgattttggggtggttgaaacttgaatctttct 3836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 167; Significance: 4e-89; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 112 - 384
Target Start/End: Complemental strand, 3872 - 3597
Alignment:
Q  112 ggatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgataga 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| | ||||||||||||||||||||| |    
T  3872 ggatttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaattgtagaaagaagtagatgatctgatggattagggtgataaa 3773  T
Q  212 ggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtcta 311  Q
    |||||||||||||| | | ||||||||||||||||||| ||||| | |||||||||| | ||||||||||||||||||||| ||||||||||||||||||    
T  3772 ggatgtttagattgtaaaataatcacagactaagtttccaatcaatattggggtttgagccgatggaaattgggattttcgtttgaaaagtcggtgtcta 3673  T
Q  312 aacgtttttgcaaataagagattatgtgagattt-ggaaatcga---tttttgggtggttgaaactcgaatctttct 384  Q
    |||| ||||||||||||||||| ||||||| ||| |||||||||   ||||||||| ||||||||| |||| |||||    
T  3672 aacg-ttttgcaaataagagatcatgtgaggtttgggaaatcgattttttttgggtagttgaaacttgaatatttct 3597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 154; Significance: 2e-81; HSPs: 3)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 180 - 384
Target Start/End: Complemental strand, 26058 - 25854
Alignment:
Q  180 aagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaa 279  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||    
T  26058 aagtaggtaatctgatggattagggtgataaaggatgtttagattgcagattaatcatagactaagttcc-aatcagttttggggtttgggtcgatggaa 25960  T
Q  280 attgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-ggaaatcgatttttgggtggttgaaactcgaat 378  Q
    ||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  25959 attggaatttacgcttgaaaagtcggagtctaaacgtttttgcaaataagagattatgtgaggtttgggaaatcgatttttgggtggttgaaacttgaat 25860  T
Q  379 ctttct 384  Q
     |||||    
T  25859 ttttct 25854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 255 - 382
Target Start/End: Original strand, 40412 - 40540
Alignment:
Q  255 agttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcg 353  Q
    |||||| |||||||||| |||| ||||||||||||||||||||  |||| |||||||||||||| |||||||||| |||||||||| | |||||||||||    
T  40412 agtttttgggtttgggttgatgaaaattgggattttcgcttgagtagtcagtgtctaaacgtttatgcaaataagtgattatgtgaggttttggaaatcg 40511  T
Q  354 atttttgggtggttgaaactcgaatcttt 382  Q
    |||||||||||||||||||| ||||||||    
T  40512 atttttgggtggttgaaacttgaatcttt 40540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 26123 - 26057
Alignment:
Q  17 tgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaa 83  Q
    |||||||||| |||||| ||||||||| |||||||  ||||||||||||||| ||||||||||||||    
T  26123 tgaagaaccggagagattgtagagctttgttcatctaaattaaggtaagggtaaggctaactctcaa 26057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 151; Significance: 1e-79; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 141 - 382
Target Start/End: Original strand, 17336 - 17577
Alignment:
Q  141 gggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacaga 240  Q
    |||||||||||||||||||||||||||||| || | ||||||||| |||| |||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  17336 gggaattagggttagaatgtagaattgaattgtggaaagaagtagataatatgatggattagggtgataaaggatgtttagattgtagattaatcacaga 17435  T
Q  241 ctaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga 340  Q
    ||||||||| ||||||| |||||||||| |||||||||||| |||||||||| ||||| ||| |||||| ||||| ||||| ||||||||||||||||||    
T  17436 ctaagtttccaatcagtattggggtttgagtcgatggaaatagggattttcgtttgaatagttggtgtcaaaacg-ttttggaaataagagattatgtga 17534  T
Q  341 gattt-ggaaatcgatttttgggtggttgaaactcgaatcttt 382  Q
    | ||| ||||||||||| |||||||||||||||| ||||||||    
T  17535 ggtttgggaaatcgattattgggtggttgaaacttgaatcttt 17577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 144; Significance: 2e-75; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 146 - 384
Target Start/End: Original strand, 35633 - 35871
Alignment:
Q  146 ttagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaag 245  Q
    ||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||| ||||    
T  35633 ttagggttagaatgtagaattgaattgtggaaagaagtagataatctgatggattagggtgataaaggatgtttagattgtagaataatcacagattaag 35732  T
Q  246 tttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt 345  Q
    |||| ||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||| |||    
T  35733 tttccaatcaatattggggtttgagtcgatggaaattgggattttcgtttgaaaagtcggtgtctaaacg-ttttgcaaataagagataatgtgaggttt 35831  T
Q  346 -ggaaatcgatttttgggtggttgaaactcgaatctttct 384  Q
     |||||||||| ||| | ||||||||||| |||| |||||    
T  35832 gggaaatcgatatttagatggttgaaacttgaatatttct 35871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 143; Significance: 7e-75; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 146 - 384
Target Start/End: Original strand, 16192 - 16432
Alignment:
Q  146 ttagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggattagggtgatagaggatgtttagattgcagattaatcacagactaag 245  Q
    ||||||||||||||||||||||||| || | ||||||||| | ||||||||||||||||||||| | ||||||||||||| ||| |||||||||||||||    
T  16192 ttagggttagaatgtagaattgaattgtggaaagaagtagatgatctgatggattagggtgataaatgatgtttagattgtagaataatcacagactaag 16291  T
Q  246 tttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt 345  Q
    |||| ||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  16292 tttccaatcagtattggggtttgagccgatggaaattgggattttcgtttgaaaagtcggtgtctaaacg-ttttgcaaataagagattatgtgaggttt 16390  T
Q  346 gg-aaatcga--tttttgggtggttgaaactcgaatctttct 384  Q
    || |||||||  |||||| |||||||||||| |||| |||||    
T  16391 ggaaaatcgatttttttgtgtggttgaaacttgaatttttct 16432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 95; Significance: 3e-46; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 251 - 384
Target Start/End: Original strand, 113166 - 113300
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaa 349  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | |||||    
T  113166 aatcagtttcggggtttgggttgatgaaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagtgattatgtgatgttctggaa 113265  T
Q  350 atcgatttttgggtggttgaaactcgaatctttct 384  Q
    |||||||||||||||||||||||| |||| |||||    
T  113266 atcgatttttgggtggttgaaacttgaatttttct 113300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 261 - 384
Target Start/End: Original strand, 118010 - 118134
Alignment:
Q  261 ggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcgattttt 359  Q
    ||||||||||| |||| |||||| |||||||||||||| | |||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||    
T  118010 ggggtttgggttgatgaaaattgagattttcgcttgaagactcggtgtctaaacgtttttgcaaataagtgattatgtgaggttttggaaatcgattttt 118109  T
Q  360 gggtggttgaaactcgaatctttct 384  Q
    |||||||||||||| |||| |||||    
T  118110 gggtggttgaaacttgaatttttct 118134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 91; Significance: 8e-44; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 22093 - 21971
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgta 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||| ||||||||| ||    
T  22093 agggagaagagccaagtgaagaaccgaagagatcgtagagcttcgttcatctaaattaaggtaagggtgaggctaactttcaataattatagtgtatcta 21994  T
Q  101 aattctgaaatggatttaacatg 123  Q
    ||||||||||  |||||||||||    
T  21993 aattctgaaactgatttaacatg 21971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 213 - 347
Target Start/End: Complemental strand, 21875 - 21741
Alignment:
Q  213 gatgtttagattgcagattaatcacagactaagtttcgaatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaa 312  Q
    |||||| || ||| ||| |||||| ||| |||| |||  ||||  |||||| |||||||  | | ||||||||||||||||| |||||| ||||||||||    
T  21875 gatgttcaggttgtagaataatcatagattaagcttcctatcaaatttgggatttgggttcacgaaaattgggattttcgctcgaaaagacggtgtctaa 21776  T
Q  313 acgtttttgcaaataagagattatgtgagatttgg 347  Q
    ||||| ||||||||||| ||||||||||| |||||    
T  21775 acgttcttgcaaataagggattatgtgaggtttgg 21741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 25926 - 26048
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgta 100  Q
    ||||||||||| |||||||||||  | |||||||||||||||| |||| |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  25926 agggagaagagccaagtgaagaattggagagatcgtagagctttgttcgtcagaattaaggtaagggtgaggctaacttccaataatcatagtgtatgta 26025  T
Q  101 aattctgaaatggatttaacatg 123  Q
     |||||||||| |||||||||||    
T  26026 gattctgaaattgatttaacatg 26048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 101 - 347
Target Start/End: Original strand, 1890 - 2138
Alignment:
Q  101 aattctgaaatgga-tttaacatgtagttgtttatgaatttgggaattagggttagaatgtagaattgaatcgttggaagaagtaggtaatctgatggat 199  Q
    ||||||||||| || |||||||||| |||||||| | |||||||||||||||||||| |  |  |||  || |||||||||||||| |||||||||| ||    
T  1890 aattctgaaattgaatttaacatgttgttgtttagggatttgggaattagggttagatttgaagattagattgttggaagaagtagataatctgatgaat 1989  T
Q  200 tagggtgatagaggatgtttagattgcagattaatcacagactaagtttcg-aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaa 298  Q
    || ||| |||   | |||| |  ||| ||| |||||| ||  ||||||||  ||||||||||  ||||| ||| |||| ||||||||||||| |||||||    
T  1990 taaggtaataagtggtgttcatgttgtagaataatcataggttaagtttcctaatcagtttttaggtttaggttgatgaaaattgggatttttgcttgaa 2089  T
Q  299 aagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    ||||| ||||||||||||||||||||||||| ||||||||||| |||||    
T  2090 aagtcagtgtctaaacgtttttgcaaataagggattatgtgaggtttgg 2138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 251 - 384
Target Start/End: Complemental strand, 4556 - 4424
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaa 349  Q
    |||||||||||||||| ||||  ||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| | |||||||    
T  4556 aatcagttttggggtt-gggttaatgaaaattgggattttcccttgaaaagtcggtgtctaaacg-ttttgcaaataagcgattatgtgaggttttggaa 4459  T
Q  350 atcgatttttgggtggttgaaactcgaatctttct 384  Q
    |||||||||||||||||||||||| |||| |||||    
T  4458 atcgatttttgggtggttgaaacttgaatttttct 4424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 4757 - 4708
Alignment:
Q  58 aaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctg 107  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  4757 aaggtaagggtgaggctaactttcaataattatagtgtatgtaaattctg 4708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 174063 - 174173
Alignment:
Q  13 caagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatg 112  Q
    ||||||||||||||||||||| ||||||||| |||||||  ||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||     
T  174063 caagtgaagaaccgaagagattgtagagctttgttcatctaaattaaggtaagggtgaagctaactttcaataattatagtgtatgtaaattctgaaatt 174162  T
Q  113 gatttaacatg 123  Q
    |||||||||||    
T  174163 gatttaacatg 174173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 251 - 347
Target Start/End: Original strand, 10952 - 11048
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    ||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  10952 aatcaattttggggtttgggttgatgaaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggtttgg 11048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 251 - 347
Target Start/End: Original strand, 5234 - 5330
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||    
T  5234 aatcaattttggggtttgggttgatgaaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttacaaataagggattatgtgaggtttgg 5330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 251 - 384
Target Start/End: Original strand, 640 - 772
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgaga-tttggaa 349  Q
    |||||||||||||||| | ||  ||| |||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||||| |||||||    
T  640 aatcagttttggggtt-gagttaatgaaaattgggattttcccttgaagagtcggtgtctaaacg-ttttgcaaataagcgattatgtgagattttggaa 737  T
Q  350 atcgatttttgggtggttgaaactcgaatctttct 384  Q
    |||||||||||||||||||||||| |||| |||||    
T  738 atcgatttttgggtggttgaaacttgaatttttct 772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 420 - 515
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaat--ggatttaacatgtagttgtt 131  Q
    ||||||||| |||||||| | | ||||||||||||||||||||  ||| |||||||||||||  ||||||||||| |   |||||||||||| ||||||    
T  420 gtagagctttgttcatca-attcaaggtaagggtgaggctaacattcagtaatcatagtgta--taaattctgaatttgtgatttaacatgttgttgtt 515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 75; Significance: 3e-34; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 251 - 372
Target Start/End: Complemental strand, 19560 - 19438
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaa 349  Q
    |||||||||| |||||||| | |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| || || || |||||    
T  19560 aatcagtttttgggtttggcttgatgaaaattgggattttcgcttgaaaagtcagtgtctaaacgtttttgcaaataagtgattacgtaaggttatggaa 19461  T
Q  350 atcgatttttgggtggttgaaac 372  Q
    | |||||||||||||||||||||    
T  19460 accgatttttgggtggttgaaac 19438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 251 - 340
Target Start/End: Complemental strand, 11243 - 11154
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga 340  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  11243 aatcagttatggggtttgggttgatgaaaattgggattttcgcttgaaaagtcagtgtctaaacgtttttgaaaataagtgattatgtga 11154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 251 - 340
Target Start/End: Complemental strand, 5123 - 5034
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga 340  Q
    |||||||| |||||||||||| |||| |||||| ||||||| | ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  5123 aatcagttatggggtttgggttgatgaaaattgagattttcacatgaaaagtcggtgtctaaacgtttttgaaaataagtgattatgtga 5034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 163386 - 163296
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatgtagttgtttatgaatttgggaatt 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||  ||| ||||||||||    
T  163386 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaactctgaaattgatttaacatgtagttgttcttgattttgggaatt 163296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 251 - 372
Target Start/End: Complemental strand, 72511 - 72389
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgaga-tttggaa 349  Q
    |||||||||| | |||||| | |||| ||||||||||||||||||||| |||||||||||||| |||||| ||||| || |||||||||||| |||||||    
T  72511 aatcagtttttgagtttggattgatgaaaattgggattttcgcttgaagagtcggtgtctaaatgtttttacaaatgagtgattatgtgagattttggaa 72412  T
Q  350 atcgatttttgggtggttgaaac 372  Q
    | |||||||||||||||||||||    
T  72411 accgatttttgggtggttgaaac 72389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 253 - 384
Target Start/End: Complemental strand, 18698 - 18568
Alignment:
Q  253 tcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaat 351  Q
    |||||||||||||| ||||  ||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||| ||||| | |||||| ||    
T  18698 tcagttttggggtt-gggtaaatgaaaattgggattttcgcttgaaaagtcggtgtctgaacg-ttttgcaaataagtgattgtgtgaggttttggagat 18601  T
Q  352 cgatttttgggtggttgaaactcgaatctttct 384  Q
    |||||||||||||||||||||| |||| |||||    
T  18600 cgatttttgggtggttgaaacttgaatttttct 18568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 18899 - 18832
Alignment:
Q  58 aaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatgga-tttaacatgt 124  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| || ||||||||||    
T  18899 aaggtaagggtgaggctaactttcaataattatagtgtatgtaaattctgaaattgagtttaacatgt 18832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 273 - 359
Target Start/End: Original strand, 730 - 816
Alignment:
Q  273 gatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttggaaatcgattttt 359  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  730 gatgaaaattgggattttcgcttgaaaagtcagtgtctaaacgtttttgcaaataagatatcatgtgaggtttggaaatcgattttt 816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 258 - 384
Target Start/End: Complemental strand, 986 - 861
Alignment:
Q  258 tttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaaatcgatt 356  Q
    |||||| ||||||| | || ||||||||||||||||||||||| ||||||||||||  | |||||||||||| ||||||||||| || ||||||||||||    
T  986 tttgggatttgggttggtgaaaattgggattttcgcttgaaaactcggtgtctaaa--tgtttgcaaataagtgattatgtgaggttctggaaatcgatt 889  T
Q  357 tttgggtggttgaaactcgaatctttct 384  Q
     |||||||||||||||| |||| |||||    
T  888 gttgggtggttgaaacttgaatttttct 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 1190 - 1154
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagt 93  Q
    |||||||||||||||||||||||||||| || |||||    
T  1190 taaggtaagggtgaggctaactctcaatgattatagt 1154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 8271 - 8179
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||||| |||||||||||||| |||||||||||| |||||||| |||||||||| ||||||||||| |||||||||||| || |||||    
T  8271 agggagaagagccaagtgaagaaccggagagatcgtagaacttcgttcgtcagaattaaagtaagggtgagactaactctcaatgattatagt 8179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 2050 - 2160
Alignment:
Q  13 caagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatg 112  Q
    |||||||||||||| |||||| |||||| || |||||||  |||||||||||||||||| |||||| |||||||| ||||| ||| |||||| ||||||     
T  2050 caagtgaagaaccggagagattgtagagttttgttcatctaaattaaggtaagggtgagactaactttcaataattatagtctatataaattttgaaatt 2149  T
Q  113 gatttaacatg 123  Q
    |||||||||||    
T  2150 gatttaacatg 2160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 262 - 347
Target Start/End: Original strand, 594 - 679
Alignment:
Q  262 gggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    ||||||| || |||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  594 gggtttgagttgatgaagattgagattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagggattatgtgaggtttgg 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 58; Significance: 4e-24; HSPs: 3)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 254 - 347
Target Start/End: Complemental strand, 7125 - 7033
Alignment:
Q  254 cagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    ||||||||||||| | || |||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||| |||||    
T  7125 cagttttggggtt-gagttgatgaaaattgggattttcgtttgaaaagtcggtgtctaaacgtttttccaaataagggattatgtgaggtttgg 7033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 251 - 373
Target Start/End: Original strand, 1466 - 1586
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttc-gcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-gga 348  Q
    |||||||||||||||| ||||  ||| |||||||||||||  | ||||||||| |||||| || |||||| ||||||||||||| ||||||| ||| |||    
T  1466 aatcagttttggggtt-gggttaatgaaaattgggattttatgtttgaaaagttggtgtccaa-cgtttt-gcaaataagagatcatgtgagttttggga 1562  T
Q  349 aatcgatttttgggtggttgaaact 373  Q
    ||||||||||| |||||||||||||    
T  1563 aatcgattttt-ggtggttgaaact 1586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 1255 - 1341
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaat--ggatttaacatgtagttgtt 131  Q
    |||||||  ||||||||||||||||||||||||  | | |||||||||||||  ||||||||||| |   |||||||||||| ||||||    
T  1255 gttcatcgaaattaaggtaagggtgaggctaacatttagtaatcatagtgta--taaattctgaatttatgatttaacatgttgttgtt 1341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 35337 - 35245
Alignment:
Q  258 tttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttggaaa 350  Q
    |||||| ||| ||| |||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  35337 tttgggatttaggttgatgtaaattgggattttcgcttgtaaagttggtgtctaaacgtttttgcaaataagggattatgtgaggtttcgaaa 35245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 29835 - 29741
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    |||||||||||||||| ||||  ||| |||||||||||||| ||||||||||||||||||||||  |||||||||||||||| |||||||| |||||    
T  29835 aatcagttttggggtt-gggttaatgaaaattgggattttcccttgaaaagtcggtgtctaaac-attttgcaaataagagactatgtgaggtttgg 29741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 35300 - 35206
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatttgg 347  Q
    |||||||||||||||| ||||  ||| |||||||||||||| ||||||||||||||||||||||  |||||||||||||||| |||||||| |||||    
T  35300 aatcagttttggggtt-gggttaatgaaaattgggattttcccttgaaaagtcggtgtctaaac-attttgcaaataagagactatgtgaggtttgg 35206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 251 - 384
Target Start/End: Complemental strand, 147475 - 147344
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagatt-tggaa 349  Q
    |||||||||||||||| ||||  ||| ||||||| ||||  | |||||||||||||||| || |||||| ||||||||| ||||||||||| || |||||    
T  147475 aatcagttttggggtt-gggttaatgaaaattggaatttatgtttgaaaagtcggtgtccaa-cgtttt-gcaaataagtgattatgtgaggttctggaa 147379  T
Q  350 atcgatttttgggtggttgaaactcgaatctttct 384  Q
    ||||||| |||||||||||||||| |||| |||||    
T  147378 atcgattgttgggtggttgaaacttgaatttttct 147344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 384
Target Start/End: Complemental strand, 117268 - 117148
Alignment:
Q  264 gtttgggtcgatggaaattgggattttcgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtga-gatttggaaatcgatttttggg 362  Q
    |||||| | |||| ||||||||||||||||||||| |||||||||||||| | |||||||||| || |||||||||| | ||| |||| ||  |||||||    
T  117268 gtttggattgatgaaaattgggattttcgcttgaagagtcggtgtctaaatg-ttttgcaaatgagtgattatgtgaggttttagaaaccgtattttggg 117170  T
Q  363 tggttgaaactcgaatctttct 384  Q
    ||||||||||| |||| |||||    
T  117169 tggttgaaactggaatttttct 117148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 28273 - 28341
Alignment:
Q  1 agggagaagagtcaagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtg 69  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||   ||||||||||||||||    
T  28273 agggagaagagccaagtgaagaaccggagagatcgtagagcttcgttcatttaaattaaggtaagggtg 28341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 11685 - 11651
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataat 87  Q
    ||||||||||||||||||| |||||||||||||||    
T  11685 gaattaaggtaagggtgagactaactctcaataat 11651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 10191 - 10122
Alignment:
Q  18 gaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataat 87  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||||||||||| |||||  ||||||||    
T  10191 gaagaaccggagagatcgtagagcttcgttcatctaaattaaggtaagggtgagactaaccttcaataat 10122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 22267 - 22198
Alignment:
Q  18 gaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataat 87  Q
    ||||||||| |||||| ||| |||||||||||||  |||||||||||||||||| |||||  ||||||||    
T  22267 gaagaaccggagagattgtaaagcttcgttcatctaaattaaggtaagggtgagactaaccttcaataat 22198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 5944 - 5859
Alignment:
Q  46 ttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaat--ggatttaacatgtagttgtt 131  Q
    |||||| |||||||||||||||||||||||||  |||||||||||||||||  ||||||||||| |   |||||||||||| ||||||    
T  5944 ttcatctgaattaaggtaagggtgaggctaacattcaataatcatagtgta--taaattctgaatttgtgatttaacatgttgttgtt 5859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 5734 - 5626
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggatttt-cgcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-gga 348  Q
    |||||||||||||| ||||||  ||| |||||||||||||  | ||||||||| |||| |  |||| ||||||||||||||||| ||||||| ||| |||    
T  5734 aatcagttttgggg-ttgggttaatgaaaattgggattttatgtttgaaaagttggtgcc--aacg-ttttgcaaataagagatcatgtgagttttggga 5639  T
Q  349 aatcgatttttgg 361  Q
    |||||||||||||    
T  5638 aatcgatttttgg 5626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 59676 - 59727
Alignment:
Q  13 caagtgaagaaccgaagagatcgtagagcttcgttcatcagaattaaggtaa 64  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||||||    
T  59676 caagtgaagaaccggagagatcgtagagcttcgttcatctaaattaaggtaa 59727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 9200 - 9115
Alignment:
Q  46 ttcatcagaattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaat--ggatttaacatgtagttgtt 131  Q
    |||||| |||||||||||||||||||||||||  ||| |||||||||||||  ||||||||||| |   |||||||||||| ||||||    
T  9200 ttcatctgaattaaggtaagggtgaggctaacattcagtaatcatagtgta--taaattctgaatttgtgatttaacatgttgttgtt 9115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 8990 - 8881
Alignment:
Q  251 aatcagttttggggtttgggtcgatggaaattgggattttc-gcttgaaaagtcggtgtctaaacgtttttgcaaataagagattatgtgagattt-gga 348  Q
    |||||||||||||||| ||||  ||| |||||||||||||  | ||||||||| |||||| || |||||| ||||||||||||| ||||||| ||| |||    
T  8990 aatcagttttggggtt-gggttaatgaaaattgggattttatgtttgaaaagttggtgtccaa-cgtttt-gcaaataagagatcatgtgagttttggga 8894  T
Q  349 aatcgatttttgg 361  Q
    |||||||||||||    
T  8893 aatcgatttttgg 8881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 289 - 229
Alignment:
Q  56 ttaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatt 116  Q
    |||||||||||||||| |||||| |||||||| ||| ||||||| ||||||||||| ||||    
T  289 ttaaggtaagggtgagactaactttcaataattatactgtatgtgaattctgaaattgatt 229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 121970 - 121931
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaat 84  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  121970 gttcatctgaattaaggtaagggtgaggctaactctcaat 121931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 132846 - 132807
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaat 84  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  132846 gttcatctgaattaaggtaagggtgaggctaactctcaat 132807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 15084 - 15141
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||| |||||||| | |||||||||| ||||||||||||||||||||| |||||    
T  15084 gtagagctttgttcatca-atttaaggtaagcgtgaggctaactctcaataattatagt 15141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 12355 - 12318
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaataatcata 91  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  12355 aattaaggtaagggtgaggctaactctcaatgatcata 12318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 16879 - 16839
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  16879 gaattaaggtaagggtgagactatctctcaataatcatagt 16839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 22093 - 22141
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||| |||||||||||||| ||||||||||||||||| || |||||    
T  22093 gttcatctgaattaaggtaaggatgaggctaactctcaatgattatagt 22141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 79089 - 79125
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaataatcat 90  Q
    ||||||||||||||||||||||||||||||| |||||    
T  79089 aattaaggtaagggtgaggctaactctcaatgatcat 79125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 101924 - 101964
Alignment:
Q  53 gaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  101924 gaattaaggtaagggtgagactatctctcaataatcatagt 101964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 7043 - 7004
Alignment:
Q  45 gttcatcagaattaaggtaagggtgaggctaactctcaat 84  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  7043 gttcatctgaattaagataagggtgaggctaactctcaat 7004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 1507 - 1440
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaaatggatttaacatg 123  Q
    |||||||||||||||||| |||||||||||| ||| || ||||  ||| ||||||||| | |||||||||    
T  1507 aattaaggtaagggtgagactaactctcaatgatcttaatgta--taatttctgaaattgttttaacatg 1440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 8030 - 7973
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||| |||||||| | | ||||||||||||||||||||||||||| || |||||    
T  8030 gtagagctttgttcatca-attcaaggtaagggtgaggctaactctcaatgattatagt 7973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 84
Target Start/End: Original strand, 2625 - 2655
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaat 84  Q
    |||||||||||||||||||||||||||||||    
T  2625 aattaaggtaagggtgaggctaactctcaat 2655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 1143 - 1087
Alignment:
Q  36 tagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaataatcatagt 93  Q
    |||||||| |||||||| |  |||||||||||||||||||||||||||| || |||||    
T  1143 tagagctttgttcatca-atctaaggtaagggtgaggctaactctcaatgattatagt 1087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 4012 - 3962
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagtgtatgtaaattctgaa 109  Q
    ||||||||||||||| |||||  |||||||||||||||||  |||||||||||    
T  4012 taaggtaagggtgagactaacattcaataatcatagtgta--taaattctgaa 3962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 656 - 623
Alignment:
Q  54 aattaaggtaagggtgaggctaactctcaataat 87  Q
    |||||||||||||||||| |||||||||||||||    
T  656 aattaaggtaagggtgagactaactctcaataat 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 39508 - 39541
Alignment:
Q  58 aaggtaagggtgaggctaactctcaataatcata 91  Q
    ||||||||||||||||||||||||||| ||||||    
T  39508 aaggtaagggtgaggctaactctcaatgatcata 39541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 33909 - 33957
Alignment:
Q  35 gtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaat 84  Q
    ||||||||| |||||||| | | |||||||||||||||||||||||||||    
T  33909 gtagagctttgttcatca-attcaaggtaagggtgaggctaactctcaat 33957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 10689 - 10739
Alignment:
Q  33 tcgtagagcttcgttcatcagaattaaggtaagggtgaggctaactctcaata 85  Q
    ||||||||||| |||||||| | | ||||||||||||||||||||||||||||    
T  10689 tcgtagagctt-gttcatca-attcaaggtaagggtgaggctaactctcaata 10739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 135528 - 135492
Alignment:
Q  57 taaggtaagggtgaggctaactctcaataatcatagt 93  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  135528 taaggtaagggtgagactatctctcaataatcatagt 135492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University