View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9412_low_10 (Length: 325)
Name: NF9412_low_10
Description: NF9412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9412_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 37 - 311
Target Start/End: Original strand, 47119509 - 47119785
Alignment:
| Q |
37 |
gaaaatgtcaattagtatattagatgaacgaatagtgcatgcaaacttctttcatatcaaacatttttctttttaataatatgtatgcatgccataaaac |
136 |
Q |
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| T |
47119509 |
gaaaatgtcaattagtatattagatgaacgaatagttcatgcaaacttctttcatatcaaacatttttgtttttaataatatgtatgcatgccataaaac |
47119608 |
T |
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| Q |
137 |
tacgag--ataacattgaggttcaaagtttacctctaaacacgtgtaatgttatgcattttttgtgaaaatgtagattgtcacttgatcttgggagtatg |
234 |
Q |
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| T |
47119609 |
tacgagctataacattgaggttcaaagtttacctctaaacacgtgtaatgttatgcattttttgtgaacatgtagattgtcacttgatcttgggagtatg |
47119708 |
T |
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| Q |
235 |
aaagtaagagaaaatttgaatccgcaacaacgttctaccactgaacttgaggatgaggtatagtcgatgtcattgat |
311 |
Q |
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| T |
47119709 |
aaagtaagagaaaatttgaatccgcaacaacgttctaccactgaacttgaggatgaggtatggtcgatgtcattgat |
47119785 |
T |
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