View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9412_low_8 (Length: 343)
Name: NF9412_low_8
Description: NF9412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9412_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 28753195 - 28752871
Alignment:
| Q |
1 |
tgcagttattgcaagagaagattaaagaacatttcgaggctggctcaaattcgaatttaaccgtgtcagaaatggcagaaaaaattgatgagcttgttac |
100 |
Q |
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| T |
28753195 |
tgcagttattgcaagagaagattaaagaacatttcgaggctggctcaaattcgactttaaccgtgtcagaaatggcagaaaaaattgatgagcttgttac |
28753096 |
T |
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| Q |
101 |
aaaagtgattagtttagaatctgctgtttcttctcaaacagctttggtaaagaatttaaaagatgaaactgatgaactccattcgctggttcgcaacctt |
200 |
Q |
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| T |
28753095 |
aaaagtgattagtttagaatctgctgtttcttctcaaacagctttggtaaagaatttaaaagatgaaactgatgaactccattcgctggttcgcaacctt |
28752996 |
T |
|
| Q |
201 |
gaaacggaaaaggaaagtttggttaacgacaaagttaaattgaacgagaaacttagagaaatggatgaaatggtgaatgaactgcaagaactaaaccaag |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
28752995 |
gaaacggaaaaggaaagtttggttaacgacaaagttaaattgaacgagaaacttagagaaatggacgaaatggtgaatgaactgcaagaactaaaccaag |
28752896 |
T |
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| Q |
301 |
ttgttgaagatcagaacaacaatct |
325 |
Q |
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||||||||||||||||||||||||| |
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| T |
28752895 |
ttgttgaagatcagaacaacaatct |
28752871 |
T |
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