View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9416_low_15 (Length: 347)

Name: NF9416_low_15
Description: NF9416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9416_low_15
NF9416_low_15
[»] chr1 (13 HSPs)
chr1 (19-338)||(5919947-5920266)
chr1 (32-290)||(5919290-5919548)
chr1 (73-279)||(5920852-5921058)
chr1 (64-164)||(5919839-5919939)
chr1 (76-290)||(5919572-5919786)
chr1 (34-332)||(5920940-5921238)
chr1 (29-138)||(5920852-5920961)
chr1 (200-333)||(5921080-5921213)
chr1 (60-181)||(5920668-5920789)
chr1 (65-150)||(5919289-5919374)
chr1 (70-150)||(5919571-5919651)
chr1 (226-303)||(5919418-5919495)
chr1 (76-148)||(5920560-5920632)
[»] chr6 (48 HSPs)
chr6 (60-181)||(29470885-29471006)
chr6 (57-164)||(28488601-28488708)
chr6 (57-164)||(29801013-29801120)
chr6 (73-335)||(29470757-29471019)
chr6 (52-150)||(29719745-29719843)
chr6 (211-337)||(29663802-29663928)
chr6 (70-164)||(29664124-29664218)
chr6 (70-181)||(29470613-29470724)
chr6 (59-150)||(29705023-29705114)
chr6 (56-150)||(29672338-29672432)
chr6 (52-150)||(29720732-29720830)
chr6 (52-150)||(29720873-29720971)
chr6 (69-150)||(29719604-29719685)
chr6 (52-177)||(29768243-29768368)
chr6 (211-299)||(28488748-28488836)
chr6 (58-150)||(29712629-29712721)
chr6 (211-299)||(29801160-29801248)
chr6 (67-150)||(28488756-28488839)
chr6 (73-164)||(28488885-28488976)
chr6 (58-181)||(29712743-29712866)
chr6 (211-302)||(29719875-29719966)
chr6 (211-302)||(29720157-29720248)
chr6 (211-302)||(29720298-29720389)
chr6 (211-302)||(29720721-29720812)
chr6 (66-181)||(29756717-29756832)
chr6 (67-150)||(29801168-29801251)
chr6 (73-164)||(29801295-29801386)
chr6 (52-150)||(29719886-29719984)
chr6 (52-150)||(29720591-29720689)
chr6 (208-289)||(28488617-28488698)
chr6 (208-289)||(29801029-29801110)
chr6 (34-150)||(29720309-29720425)
chr6 (34-150)||(29721014-29721130)
chr6 (66-129)||(29663869-29663932)
chr6 (221-264)||(29664165-29664208)
chr6 (66-181)||(29691085-29691200)
chr6 (51-150)||(29720027-29720126)
chr6 (211-302)||(29721144-29721235)
chr6 (55-129)||(29690582-29690656)
chr6 (52-150)||(29720168-29720266)
chr6 (83-181)||(29768587-29768685)
chr6 (19-129)||(29768705-29768815)
chr6 (221-290)||(28488900-28488969)
chr6 (221-290)||(29672339-29672408)
chr6 (73-150)||(29721296-29721373)
chr6 (19-116)||(29768511-29768608)
chr6 (221-290)||(29801310-29801379)
chr6 (34-150)||(29721155-29721271)
[»] scaffold0012 (8 HSPs)
scaffold0012 (94-181)||(200047-200134)
scaffold0012 (91-150)||(200219-200278)
scaffold0012 (52-150)||(236897-236995)
scaffold0012 (60-181)||(237007-237128)
scaffold0012 (223-331)||(210273-210381)
scaffold0012 (66-181)||(210282-210397)
scaffold0012 (211-290)||(200220-200299)
scaffold0012 (228-290)||(200079-200141)
[»] chr3 (7 HSPs)
chr3 (52-331)||(617650-617929)
chr3 (58-164)||(617092-617198)
chr3 (52-150)||(617509-617607)
chr3 (52-150)||(616945-617043)
chr3 (66-150)||(617241-617325)
chr3 (221-309)||(616409-616497)
chr3 (85-149)||(616414-616478)
[»] scaffold0007 (6 HSPs)
scaffold0007 (37-181)||(73988-74132)
scaffold0007 (217-290)||(70526-70599)
scaffold0007 (112-150)||(70562-70600)
scaffold0007 (217-290)||(34694-34767)
scaffold0007 (217-290)||(40007-40080)
scaffold0007 (221-305)||(74031-74115)
[»] chr8 (1 HSPs)
chr8 (221-336)||(12591378-12591493)


Alignment Details
Target: chr1 (Bit Score: 304; Significance: 1e-171; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 19 - 338
Target Start/End: Complemental strand, 5920266 - 5919947
Alignment:
Q  19 gatgggatgttggagaaacttaaaattatgagagttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5920266 gatgggatgttggagaaacttaaaattatgagagttaaaagttgtagcaatctcaagagtatcccacctctaaagttggcttcactggaagaacttgatc 5920167  T
Q  119 tttcatattgtgatagtctcgagagttttccatcagtggtggatggatttttgggtaaacttagagtactgagcgtcaaaggttgcaaaaaactcaaaag 218  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  5920166 tttcatattgtgatagtctcgagagttttccaacagtggtggatggatttttgggtaaacttagagtattgagcgtcaaaggttgcaacaaactcaaaag 5920067  T
Q  219 ttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcctcttttggtggatggatttatggataaa 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5920066 ttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcctcttttggtggatggatttatggataaa 5919967  T
Q  319 cttcaattcttgagtattat 338  Q
    ||||||||||||||||||||    
T  5919966 cttcaattcttgagtattat 5919947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 32 - 290
Target Start/End: Complemental strand, 5919548 - 5919290
Alignment:
Q  32 agaaacttaaaattatgagagttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtga 131  Q
    |||||||||||||  ||||||||| || ||| |||||| | ||||||||||| ||||| || |||||||| || ||||||||  |||||||||||||| |    
T  5919548 agaaacttaaaatcttgagagttacaaattgcagcaatattaggagtatcccgcctctcaatttggcttcgctagaagaactcaatctttcatattgtca 5919449  T
Q  132 tagtctcgagagttttccatcagtggtggatggatttttgggtaaacttagagtactgagcgtcaaaggttgcaaaaaactcaaaagttttccacctctc 231  Q
    || ||| ||| ||||||||   ||||||||| | |||     ||| || | ||| || || || | |  ||||   || ||||| ||| |||||||||||    
T  5919448 taatcttgagtgttttccacttgtggtggatcggtttccaaataatctcaaagtcctcagtgttagatattgccgcaagctcaagagtattccacctctc 5919349  T
Q  232 aagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcc 290  Q
    ||||| |||||  ||||||| ||||||||||||||||||||||| || |||||||||||    
T  5919348 aagtttgcttcgctagaagttcttgatctttcatattgtgataaccttgagagttttcc 5919290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 73 - 279
Target Start/End: Complemental strand, 5921058 - 5920852
Alignment:
Q  73 aggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtggtggatggatttttgg 172  Q
    |||||||| |||||||| ||| |||||||||| ||||||||| |||||| ||||||||||||||||||| ||||||||   ||||||||||| ||  |||    
T  5921058 aggagtattccacctcttaagatggcttcacttgaagaacttaatcttttatattgtgatagtctcgagtgttttccacttgtggtggatgggttactgg 5920959  T
Q  173 gtaaacttagagtactgagcgtcaaaggttgcaaaaaactcaaaagttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtga 272  Q
      ||||||| | |  |||| || | ||||||||  ||  |||||||| | |||||| |||||||| ||||  |||||| ||| ||||| ||||||||| |    
T  5920958 agaaacttaaaatcttgagagttataggttgcagtaatatcaaaagtatcccacctttcaagttgacttcactagaagaactcgatctatcatattgtaa 5920859  T
Q  273 taatctc 279  Q
    || ||||    
T  5920858 tagtctc 5920852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 164
Target Start/End: Complemental strand, 5919939 - 5919839
Alignment:
Q  64 agcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtggtggatg 163  Q
    ||||| |||||||| || |||||||| |||||||||| ||||||| |  ||||||||||||||||||||||||| | |||||||||| | ||||||||||    
T  5919939 agcaagctcaggagcattccacctctcaagttggctttactggaacattttgatctttcatattgtgatagtcttgtgagttttccacctgtggtggatg 5919840  T
Q  164 g 164  Q
    |    
T  5919839 g 5919839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 76 - 290
Target Start/End: Complemental strand, 5919786 - 5919572
Alignment:
Q  76 agtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtggtggatggatttttgggta 175  Q
    |||||||||||||| |||||| |||| || ||||||||| ||||| ||||||||||| | |||||||||||||||   ||||| ||||| ||  ||||||    
T  5919786 agtatcccacctctcaagttgacttccctagaagaacttaatcttacatattgtgatggcctcgagagttttccacatgtggtagatgggttgctgggta 5919687  T
Q  176 aacttagagtactgagcgtcaaaggttgcaaaaaactcaaaagttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataa 275  Q
    ||||||  || || |  || | |  |||| | || ||||| ||| ||||||||||||| || | |||  | |||  ||| |||||||| ||||||||||     
T  5919686 aacttaaggtccttaatgttagatattgccacaagctcaagagtattccacctctcaaattagattcgctggaacaactcgatctttcttattgtgatag 5919587  T
Q  276 tctcgagagttttcc 290  Q
    |||| ||||||||||    
T  5919586 tctcaagagttttcc 5919572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 34 - 332
Target Start/End: Complemental strand, 5921238 - 5920940
Alignment:
Q  34 aaacttaaaattatgagagttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgata 133  Q
    |||||||||||  ||||||||  |||||| |  || |||| |||| | |||||||| ||||||| ||| || |||||||| ||||||||||||  |||||    
T  5921238 aaacttaaaatcttgagagttggaagttgcaagaagctcaagagtcttccacctctcaagttggtttcgctagaagaactcgatctttcatatattgata 5921139  T
Q  134 gtctcgagagttttccatcagtggtggatggatttttgggtaaacttagagtactgagcgtcaaaggttgcaaaaaactcaaaagttttccacctctcaa 233  Q
    |||||||||||||||||   ||||| ||||| ||| |   |||||||  |    |||| || |||  |||||| |   | |  ||| |||||||||| ||    
T  5921138 gtctcgagagttttccacatgtggtagatgggtttcttaataaacttcaaaccttgagtgttaaaaattgcaacactattaggagtattccacctcttaa 5921039  T
Q  234 gttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcctcttttggtggatggatttatggataaacttcaattcttgag 332  Q
    | |||||||  | |||| |||| |||||| ||||||||||| ||||||| ||||||| ||| |||||||||| ||  |||| |||||| || |||||||    
T  5921038 gatggcttcacttgaagaacttaatcttttatattgtgatagtctcgagtgttttccacttgtggtggatgggttactggagaaacttaaaatcttgag 5920940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 138
Target Start/End: Complemental strand, 5920961 - 5920852
Alignment:
Q  29 tggagaaacttaaaattatgagagttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattg 128  Q
    ||||||||||||||||  ||||||||| | |||| || ||| |||  |||||||||||| | |||||| ||||||| |||||||| ||||| ||||||||    
T  5920961 tggagaaacttaaaatcttgagagttataggttgcagtaatatcaaaagtatcccacctttcaagttgacttcactagaagaactcgatctatcatattg 5920862  T
Q  129 tgatagtctc 138  Q
    | ||||||||    
T  5920861 taatagtctc 5920852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 333
Target Start/End: Complemental strand, 5921213 - 5921080
Alignment:
Q  200 gttgcaaaaaactcaaaagttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcctcttttggt 299  Q
    ||||||| || ||||| ||| |||||||||||||||||| |||  |||||| ||| ||||||||||||  ||||| ||||||||||||||| | | ||||    
T  5921213 gttgcaagaagctcaagagtcttccacctctcaagttggtttcgctagaagaactcgatctttcatatattgatagtctcgagagttttccacatgtggt 5921114  T
Q  300 ggatggatttatggataaacttcaattcttgagt 333  Q
     ||||| ||| |  |||||||||||  |||||||    
T  5921113 agatgggtttcttaataaacttcaaaccttgagt 5921080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 5920789 - 5920668
Alignment:
Q  60 ttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtggtg 159  Q
    |||| |||| |||| || ||| |||||||| ||||||| | |  ||||| |||| ||||||||||||||  |||| || |||||||||||| | ||||||    
T  5920789 ttgttgcaagctcaagaatattccacctctcaagttgggtgctttggaacaactcgatctttcatattgcaatagccttgagagttttccacccgtggtg 5920690  T
Q  160 gatggatttttgggtaaactta 181  Q
    ||||| || |||||||||||||    
T  5920689 gatgggttgttgggtaaactta 5920668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 5919374 - 5919289
Alignment:
Q  65 gcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    |||| |||| |||||| |||||||| ||||| ||||| || ||||  ||||||||||||||||||||||  || ||||||||||||    
T  5919374 gcaagctcaagagtattccacctctcaagtttgcttcgctagaagttcttgatctttcatattgtgataaccttgagagttttcca 5919289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 70 - 150
Target Start/End: Complemental strand, 5919651 - 5919571
Alignment:
Q  70 ctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    |||| |||||| |||||||| || || | ||| |||||| |||| |||||||| ||||||||||||||| |||||||||||    
T  5919651 ctcaagagtattccacctctcaaattagattcgctggaacaactcgatctttcttattgtgatagtctcaagagttttcca 5919571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 303
Target Start/End: Complemental strand, 5919495 - 5919418
Alignment:
Q  226 cctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcctcttttggtggat 303  Q
    |||||||| ||||||||  |||||| |||  |||||||||||||| ||||||| ||| ||||||| ||| ||||||||    
T  5919495 cctctcaatttggcttcgctagaagaactcaatctttcatattgtcataatcttgagtgttttccacttgtggtggat 5919418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 5920632 - 5920560
Alignment:
Q  76 agtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttc 148  Q
    |||||||||||||| ||||| | ||| ||  | |||||  |||||||||||||||||||||| |||| |||||    
T  5920632 agtatcccacctctcaagttagattcgctaaaggaactgcatctttcatattgtgatagtcttgagaattttc 5920560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 6e-22; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 60 - 181
Target Start/End: Original strand, 29470885 - 29471006
Alignment:
Q  60 ttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtggtg 159  Q
    |||| |||||||||||||||| |||||||| | ||||| |||| | ||| | ||||| |||||| ||||| |||||||||||||||||||| | ||||||    
T  29470885 ttgtcgcaatctcaggagtattccacctctcaggttggattcattagaaaagcttgacctttcacattgttatagtctcgagagttttccaactgtggtg 29470984  T
Q  160 gatggatttttgggtaaactta 181  Q
    ||||| || |||| ||||||||    
T  29470985 gatgggttgttggataaactta 29471006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 57 - 164
Target Start/End: Complemental strand, 28488708 - 28488601
Alignment:
Q  57 aagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtg 156  Q
    |||||||  ||| ||||||||||| |||||||| ||||||| |||||| ||| ||||||| ||||||||||||  ||||||||||||||||| ||| |||    
T  28488708 aagttgtcacaaactcaggagtattccacctctcaagttggattcactagaaaaacttgacctttcatattgttgtagtctcgagagttttctatctgtg 28488609  T
Q  157 gtggatgg 164  Q
    | ||||||    
T  28488608 gaggatgg 28488601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 57 - 164
Target Start/End: Complemental strand, 29801120 - 29801013
Alignment:
Q  57 aagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtg 156  Q
    |||||||  ||| ||||||||||| |||||||| ||||||| |||||| ||| ||||||| ||||||||||||  ||||||||||||||||| ||| |||    
T  29801120 aagttgtcacaaactcaggagtattccacctctcaagttggattcactagaaaaacttgacctttcatattgttgtagtctcgagagttttctatctgtg 29801021  T
Q  157 gtggatgg 164  Q
    | ||||||    
T  29801020 gaggatgg 29801013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 73 - 335
Target Start/End: Original strand, 29470757 - 29471019
Alignment:
Q  73 aggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtggtggatggatttttgg 172  Q
    |||||||| ||| |||| |||||| ||||  | |||||||| ||||||||| |||||  |||||||||||||||||||   ||||||||||| ||| | |    
T  29470757 aggagtattccaactcttaagttgacttcgttagaagaactcgatctttcaaattgttttagtctcgagagttttccacttgtggtggatgggtttcttg 29470856  T
Q  173 gtaaacttagagtactgagcgtcaaaggttgcaaaaaactcaaaagttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtga 272  Q
    | ||||||| | | ||    || |||  |||    || ||||  ||| |||||||||||| ||||| ||| ||||||   ||||| |||||| ||||| |    
T  29470857 gaaaacttaaaatcctacttgttaaatattgtcgcaatctcaggagtattccacctctcaggttggattcattagaaaagcttgacctttcacattgtta 29470956  T
Q  273 taatctcgagagttttcctcttttggtggatggatttatggataaacttcaattcttgagtat 335  Q
    || |||||||||||||||   | |||||||||| ||  ||||||||||| |||||||||||||    
T  29470957 tagtctcgagagttttccaactgtggtggatgggttgttggataaacttaaattcttgagtat 29471019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 29719843 - 29719745
Alignment:
Q  52 gttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    |||||| ||||| |||||||||| ||||| |||||||| ||||||| ||||||||||  ||| || |||||| ||||| ||||||| ||||||||||||    
T  29719843 gttaaatgttgtcgcaatctcagaagtattccacctcttaagttggattcactggaaacactagaactttcagattgtcatagtcttgagagttttcca 29719745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 337
Target Start/End: Complemental strand, 29663928 - 29663802
Alignment:
Q  211 ctcaaaagttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcctcttttggtggatggattta 310  Q
    |||| |||| |||||||||||||||||| |||  |||||| |||||| |||||||||||| ||||||| ||  | |||||   | | |||||||| ||      
T  29663928 ctcataagtattccacctctcaagttggattcgctagaagaacttgacctttcatattgttataatcttgatggctttccagatgttgtggatgggttgt 29663829  T
Q  311 tggataaacttcaattcttgagtatta 337  Q
    ||||||||||| |||||||||||||||    
T  29663828 tggataaacttgaattcttgagtatta 29663802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 164
Target Start/End: Complemental strand, 29664218 - 29664124
Alignment:
Q  70 ctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtggtggatgg 164  Q
    ||||||||||| |||||||| || |||||||| || |||||||||||||||||| | |||    |||| |||||||||||| |||||||||||||    
T  29664218 ctcaggagtattccacctctcaacttggcttctctagaagaacttgatctttcagagtgttcatgtcttgagagttttccaccagtggtggatgg 29664124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 181
Target Start/End: Original strand, 29470613 - 29470724
Alignment:
Q  70 ctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtggtggatggatttt 169  Q
    ||||||||||| || ||||| ||||||||||| ||||||||||| ||||||||| | |||  | |||| |||||||||||| | ||||| ||||| ||      
T  29470613 ctcaggagtattccgcctctcaagttggcttctctggaagaactcgatctttcacagtgttcttgtcttgagagttttccacctgtggtagatgggttgg 29470712  T
Q  170 tgggtaaactta 181  Q
    ||| ||||||||    
T  29470713 tggataaactta 29470724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 29705114 - 29705023
Alignment:
Q  59 gttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    |||||| |||||| |||||||| || ||||| ||||||| |||||| |||  |||||| ||||||| |||| ||||||| ||||||||||||    
T  29705114 gttgtaccaatctaaggagtattccccctctcaagttggattcactagaaacacttgaactttcatgttgttatagtcttgagagttttcca 29705023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 29672432 - 29672338
Alignment:
Q  56 aaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    ||||||||  ||||||||||||||| ||||| || ||||||| |||  | ||| |||||||  |||||||||||| |||||| ||||||||||||    
T  29672432 aaagttgtcacaatctcaggagtattccaccactcaagttggattcgttagaaaaacttgacatttcatattgtggtagtcttgagagttttcca 29672338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 29720830 - 29720732
Alignment:
Q  52 gttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    ||||||| ||||  |||||||| |||||| |||||||| ||||||| |||||| |||  ||| || ||||||| |||||||| ||| ||||||||||||    
T  29720830 gttaaaaattgtcacaatctcaagagtattccacctctcaagttggattcactagaaacactagaactttcatgttgtgatactcttgagagttttcca 29720732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 29720971 - 29720873
Alignment:
Q  52 gttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    ||||||| ||||  |||||||| |||||| |||||||| ||||||| |||||| |||  ||| || |||||| ||||| ||||||| ||||||||||||    
T  29720971 gttaaaaattgtcacaatctcaagagtattccacctctcaagttggattcactagaaacactagaactttcagattgtcatagtcttgagagttttcca 29720873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 29719685 - 29719604
Alignment:
Q  69 tctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    |||||||||||| |||||||| ||||||| |||||| |||  |||||||||||||| ||||  |||||| |||| |||||||    
T  29719685 tctcaggagtattccacctctcaagttggattcactagaaacacttgatctttcatgttgttttagtcttgagaattttcca 29719604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 29768368 - 29768243
Alignment:
Q  52 gttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccat 151  Q
    ||||||| ||||  ||||||||||| ||| ||| |||| ||||||| |||||| ||| ||||||| |||||| ||||| |||  |||||||| ||||||     
T  29768368 gttaaaaattgtcacaatctcaggaatattccagctctcaagttggattcacttgaaaaacttgacctttcagattgttataagctcgagagctttccaa 29768269  T
Q  152 cagtggtggatggatttttgggtaaa 177  Q
      ||||||||||| || |||| ||||    
T  29768268 gtgtggtggatgggttgttggataaa 29768243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 211 - 299
Target Start/End: Complemental strand, 28488836 - 28488748
Alignment:
Q  211 ctcaaaagttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcctcttttggt 299  Q
    ||||| ||| |||||||||||| ||||| |||  |||||  |||||| |||||| ||||| ||||||||||||||||||| ||| ||||    
T  28488836 ctcaagagtattccacctctcatgttggattcactagaaacacttgacctttcaaattgttataatctcgagagttttccacttgtggt 28488748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 29712721 - 29712629
Alignment:
Q  58 agttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    |||||| | |||||||||||||| |||||||| ||||||| || ||||||   | |||| |||||||||||| ||||||| |||| |||||||    
T  29712721 agttgtcggaatctcaggagtattccacctctcaagttggatttactggagacatttgacctttcatattgtcatagtcttgagaattttcca 29712629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 211 - 299
Target Start/End: Complemental strand, 29801248 - 29801160
Alignment:
Q  211 ctcaaaagttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcctcttttggt 299  Q
    ||||| ||| |||||||||||| ||||| |||  |||||  |||||| |||||| ||||| ||||||||||||||||||| ||| ||||    
T  29801248 ctcaagagtattccacctctcatgttggattcactagaaacacttgacctttcaaattgttataatctcgagagttttccacttgtggt 29801160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 28488839 - 28488756
Alignment:
Q  67 aatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    ||||||| |||||| |||||||| | ||||| |||||| |||  |||||| |||||| ||||| ||| ||||||||||||||||    
T  28488839 aatctcaagagtattccacctctcatgttggattcactagaaacacttgacctttcaaattgttataatctcgagagttttcca 28488756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 28488976 - 28488885
Alignment:
Q  73 aggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtggtggatgg 164  Q
    |||||||| ||| |||| | ||| ||||| || |||||||||||||||||| |||||  |||||| ||||||||||||  ||||| ||||||    
T  28488976 aggagtattccaactctcatgttagcttctctagaagaacttgatctttcagattgtattagtcttgagagttttccaatagtggaggatgg 28488885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 29712866 - 29712743
Alignment:
Q  58 agttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtgg 157  Q
    |||||| |||||||||||||||| |||||||| ||||||| |||||| |||   |||||  ||||| ||||| |  |||| ||||||||||||   ||||    
T  29712866 agttgtcgcaatctcaggagtattccacctctcaagttggattcactagaaactcttgacttttcacattgtcacggtcttgagagttttccaattgtgg 29712767  T
Q  158 tggatggatttttgggtaaactta 181  Q
    |||| || ||||| || |||||||    
T  29712766 tggacgggttttttggaaaactta 29712743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 29719966 - 29719875
Alignment:
Q  211 ctcaaaagttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcctcttttggtgga 302  Q
    ||||| ||| |||||||||||||||||| |||  |||||  ||| || ||||||| |||||||| ||| ||||||||||| ||| |||||||    
T  29719966 ctcaagagtattccacctctcaagttggattcactagaaacactagaactttcatgttgtgatactcttgagagttttccacttgtggtgga 29719875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 29720248 - 29720157
Alignment:
Q  211 ctcaaaagttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcctcttttggtgga 302  Q
    ||||||||| |||||||||||||||||| |||  |||||  ||| || ||||||  |||||||| ||| ||||||||||| ||| |||||||    
T  29720248 ctcaaaagtattccacctctcaagttggattcactagaaacactagaactttcaggttgtgatactcttgagagttttccacttgtggtgga 29720157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 29720389 - 29720298
Alignment:
Q  211 ctcaaaagttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcctcttttggtgga 302  Q
    |||| ||||||||||||||||||||||| |||  |||||  ||| || |||||| ||||| ||| ||| ||||||||||| ||| |||||||    
T  29720389 ctcagaagttttccacctctcaagttggattcactagaaacactagaactttcagattgtcatagtcttgagagttttccacttgtggtgga 29720298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 29720812 - 29720721
Alignment:
Q  211 ctcaaaagttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcctcttttggtgga 302  Q
    ||||| ||| |||||||||||||||||| |||  |||||  ||| || ||||||| |||||||| ||| ||||||||||| ||| |||||||    
T  29720812 ctcaagagtattccacctctcaagttggattcactagaaacactagaactttcatgttgtgatactcttgagagttttccacttgtggtgga 29720721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 29756832 - 29756717
Alignment:
Q  66 caatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtggtggatgga 165  Q
    |||||||| ||||||||||||||| ||| ||| |||  | ||  ||||||| ||||||| |||   |||||| |||||||||||||  |||||||||||     
T  29756832 caatctcaagagtatcccacctctcaagctggattctttagagaaacttgacctttcatgttgctgtagtcttgagagttttccatgtgtggtggatggg 29756733  T
Q  166 tttttgggtaaactta 181  Q
    || |||| ||||||||    
T  29756732 ttgttggataaactta 29756717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 29801251 - 29801168
Alignment:
Q  67 aatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    ||||||| |||||| |||||||| | ||||| |||||| |||  |||||| |||||| ||||| ||| ||||||||||||||||    
T  29801251 aatctcaagagtattccacctctcatgttggattcactagaaacacttgacctttcaaattgttataatctcgagagttttcca 29801168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 29801386 - 29801295
Alignment:
Q  73 aggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtggtggatgg 164  Q
    |||||||| ||| |||| | ||| ||||| || |||||||||||||||||| |||||  |||||| ||||||||||||  ||||| ||||||    
T  29801386 aggagtattccaactctcatgttagcttctctagaagaacttgatctttcagattgtattagtcttgagagttttccaatagtggaggatgg 29801295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 29719984 - 29719886
Alignment:
Q  52 gttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    ||||||| ||||  || ||||| |||||| |||||||| ||||||| |||||| |||  ||| || ||||||| |||||||| ||| ||||||||||||    
T  29719984 gttaaaaattgtcacagtctcaagagtattccacctctcaagttggattcactagaaacactagaactttcatgttgtgatactcttgagagttttcca 29719886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 29720689 - 29720591
Alignment:
Q  52 gttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    |||||| ||||| |||||||||| ||||| |||||||| ||||||| ||| ||||||  |||  | |||||| ||||| || |||| ||||||||||||    
T  29720689 gttaaatgttgtcgcaatctcagaagtattccacctctcaagttggattccctggaaacactaaaactttcagattgtcattgtcttgagagttttcca 29720591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 28488698 - 28488617
Alignment:
Q  208 aaactcaaaagttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttc 289  Q
    |||||||  ||| |||||||||||||||||| |||  |||||  |||||| ||||||||||||  || ||||||||||||||    
T  28488698 aaactcaggagtattccacctctcaagttggattcactagaaaaacttgacctttcatattgttgtagtctcgagagttttc 28488617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 29801110 - 29801029
Alignment:
Q  208 aaactcaaaagttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttc 289  Q
    |||||||  ||| |||||||||||||||||| |||  |||||  |||||| ||||||||||||  || ||||||||||||||    
T  29801110 aaactcaggagtattccacctctcaagttggattcactagaaaaacttgacctttcatattgttgtagtctcgagagttttc 29801029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 29720425 - 29720309
Alignment:
Q  34 aaacttaaaattatgagagttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgata 133  Q
    ||||||||||  ||||  |||| ||| ||| ||| |||||| ||| | |||||||| ||||||| |||||| |||  ||| || |||||| ||||| |||    
T  29720425 aaacttaaaaccatgattgttacaagctgtcgcagtctcagaagttttccacctctcaagttggattcactagaaacactagaactttcagattgtcata 29720326  T
Q  134 gtctcgagagttttcca 150  Q
    |||| ||||||||||||    
T  29720325 gtcttgagagttttcca 29720309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 29721130 - 29721014
Alignment:
Q  34 aaacttaaaattatgagagttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgata 133  Q
    ||||||||||  ||||  |||| ||| ||| ||| |||||||||| | || ||||| ||||||| |||||| |||  ||| || |||||| ||||| |||    
T  29721130 aaacttaaaaccatgattgttacaagctgtcgcagtctcaggagttttccgcctctcaagttggattcactagaaacactagaactttcaaattgtcata 29721031  T
Q  134 gtctcgagagttttcca 150  Q
    |||| ||||||||||||    
T  29721030 gtcttgagagttttcca 29721014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 129
Target Start/End: Complemental strand, 29663932 - 29663869
Alignment:
Q  66 caatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgt 129  Q
    ||||||||  ||||| |||||||| ||||||| ||| || ||||||||||| ||||||||||||    
T  29663932 caatctcataagtattccacctctcaagttggattcgctagaagaacttgacctttcatattgt 29663869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 264
Target Start/End: Complemental strand, 29664208 - 29664165
Alignment:
Q  221 ttccacctctcaagttggcttctttagaagtacttgatctttca 264  Q
    ||||||||||||| ||||||||| |||||| |||||||||||||    
T  29664208 ttccacctctcaacttggcttctctagaagaacttgatctttca 29664165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 29691200 - 29691085
Alignment:
Q  66 caatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtggtggatgga 165  Q
    |||||||  ||||||  ||||||| ||||||| |||||| ||| ||||||  |||||| ||||| |||  |||||||| ||||||   ||||||||||||    
T  29691200 caatctcgtgagtatatcacctctcaagttggattcactagaaaaacttgtcctttcaaattgttataagctcgagagctttccaagcgtggtggatgga 29691101  T
Q  166 tttttgggtaaactta 181  Q
    ||| | || |||||||    
T  29691100 tttcttggaaaactta 29691085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 150
Target Start/End: Complemental strand, 29720126 - 29720027
Alignment:
Q  51 agttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    |||||| |||||| |||||||||| | ||| |||||||| ||||||| |||||| |||  ||| ||  ||||  ||||| ||||||| ||||||||||||    
T  29720126 agttaagagttgtcgcaatctcagaattataccacctctcaagttggattcactagaaacactagaattttcgaattgtcatagtcttgagagttttcca 29720027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 29721235 - 29721144
Alignment:
Q  211 ctcaaaagttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcctcttttggtgga 302  Q
    |||| ||||||||||||||||||||||| |||  |||||  |||  | ||||||| |||| ||| ||| ||||||||||| ||| |||||||    
T  29721235 ctcagaagttttccacctctcaagttggattcactagaaacactaaaactttcattttgtcatagtcttgagagttttccacttgtggtgga 29721144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 29690656 - 29690582
Alignment:
Q  55 aaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgt 129  Q
    |||||||||  ||||||||||||||| ||| |||| ||||||| |||||| ||| ||||| | || |||||||||    
T  29690656 aaaagttgtcacaatctcaggagtattccagctctcaagttggattcacttgaaaaactttacctatcatattgt 29690582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 29720266 - 29720168
Alignment:
Q  52 gttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    ||||||| ||||  ||||||||  ||||| |||||||| ||||||| |||||| |||  ||| || ||||||  |||||||| ||| ||||||||||||    
T  29720266 gttaaaaattgtcacaatctcaaaagtattccacctctcaagttggattcactagaaacactagaactttcaggttgtgatactcttgagagttttcca 29720168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 29768685 - 29768587
Alignment:
Q  83 cacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtggtggatggatttttgggtaaactta 181  Q
    ||||||| ||||||| |||||| ||| ||||||  |||||| ||||| |||  |||||||| ||||||   ||||||||||| || |||| ||||||||    
T  29768685 cacctctcaagttggattcactagaaaaacttgtcctttcaaattgttataagctcgagagctttccaagcgtggtggatgggttgttggataaactta 29768587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 29768815 - 29768705
Alignment:
Q  19 gatgggatgttggagaaacttaaaattatgagagttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatc 118  Q
    |||||| ||||||| ||||||||||   ||   ||||||| ||||  ||||||||||||||| ||| |||| ||||||| |||||| ||| ||||||| |    
T  29768815 gatgggttgttggataaacttaaaaccctgtttgttaaaaattgtcacaatctcaggagtattccagctctcaagttggattcacttgaaaaacttgacc 29768716  T
Q  119 tttcatattgt 129  Q
    | ||| |||||    
T  29768715 tatcacattgt 29768705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 28488969 - 28488900
Alignment:
Q  221 ttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcc 290  Q
    ||||| |||||| ||| |||||| |||||| ||||||||||||| |||||  || ||| |||||||||||    
T  28488969 ttccaactctcatgttagcttctctagaagaacttgatctttcagattgtattagtcttgagagttttcc 28488900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 29672408 - 29672339
Alignment:
Q  221 ttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcc 290  Q
    ||||||| |||||||||| ||| ||||||  ||||||  |||||||||||| || ||| |||||||||||    
T  29672408 ttccaccactcaagttggattcgttagaaaaacttgacatttcatattgtggtagtcttgagagttttcc 29672339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 29721373 - 29721296
Alignment:
Q  73 aggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    |||||||| |||||||| ||||||| |||||| |||  |||  | ||||||| |||| ||||||| ||||||||||||    
T  29721373 aggagtattccacctctcaagttggattcactagaaacactaaaactttcattttgtcatagtcttgagagttttcca 29721296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 29768608 - 29768511
Alignment:
Q  19 gatgggatgttggagaaacttaaaattatgagagttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttga 116  Q
    |||||| ||||||| ||||||||||   ||   ||||||| ||||  ||||||||||||||| ||| |||| ||||||| |||||| ||| |||||||    
T  29768608 gatgggttgttggataaacttaaaaccctgtttgttaaaaattgtcacaatctcaggagtattccagctctcaagttggattcacttgaaaaacttga 29768511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 29801379 - 29801310
Alignment:
Q  221 ttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcc 290  Q
    ||||| |||||| ||| |||||| |||||| ||||||||||||| |||||  || ||| |||||||||||    
T  29801379 ttccaactctcatgttagcttctctagaagaacttgatctttcagattgtattagtcttgagagttttcc 29801310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 29721271 - 29721155
Alignment:
Q  34 aaacttaaaattatgagagttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgata 133  Q
    ||||||||||  ||||  |||| ||| ||| ||| |||||| ||| | |||||||| ||||||| |||||| |||  |||  | ||||||| |||| |||    
T  29721271 aaacttaaaaccatgattgttacaagctgtcgcagtctcagaagttttccacctctcaagttggattcactagaaacactaaaactttcattttgtcata 29721172  T
Q  134 gtctcgagagttttcca 150  Q
    |||| ||||||||||||    
T  29721171 gtcttgagagttttcca 29721155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 52; Significance: 9e-21; HSPs: 8)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 200134 - 200047
Alignment:
Q  94 ttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtggtggatggatttttgggtaaactta 181  Q
    ||||||||||| ||||||||  || |||||||||||||||||||||||||||||||||| |||||||| ||| | || ||||||||||    
T  200134 ttggcttcactagaagaactcaatttttcatattgtgatagtctcgagagttttccatctgtggtggagggaatgttaggtaaactta 200047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 200278 - 200219
Alignment:
Q  91 aagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||| | |||||||    
T  200278 aagttggcttcattggaacaatttgatctttcatattgtgatagtctcgaaaattttcca 200219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 236995 - 236897
Alignment:
Q  52 gttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    ||||| |||||| || ||||||||||||| |||||||| ||||||| ||| || |||||||||| | ||  ||||||| ||||||| ||| ||||||||    
T  236995 gttaatagttgtcgcgatctcaggagtattccacctctcaagttggattctctagaagaacttgcttttcaatattgttatagtcttgagcgttttcca 236897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 237128 - 237007
Alignment:
Q  60 ttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtggtg 159  Q
    ||||| ||| || ||||||||||||||||| ||||||| ||| || |||   ||| | || |||| |||||||||||| |||||||||||| | ||||||    
T  237128 ttgtatcaagctaaggagtatcccacctctcaagttggattcgctagaaacccttaacctctcatgttgtgatagtcttgagagttttccacctgtggtg 237029  T
Q  160 gatggatttttgggtaaactta 181  Q
    ||||| ||| | || |||||||    
T  237028 gatgggtttcttggaaaactta 237007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 331
Target Start/End: Complemental strand, 210381 - 210273
Alignment:
Q  223 ccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcctcttttggtggatggatttatggataaacttc 322  Q
    |||||||||||||||| ||| |||||||||||||| ||||||| ||||  || ||| || ||||||||   | |||||||||  ||  |||||||||||     
T  210381 ccacctctcaagttggattcattagaagtacttgacctttcatgttgttgtagtcttgaaagttttccatgtgtggtggatgagttgttggataaactta 210282  T
Q  323 aattcttga 331  Q
    |||||||||    
T  210281 aattcttga 210273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 210397 - 210282
Alignment:
Q  66 caatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtggtggatgga 165  Q
    |||||| | ||| ||||||||||| ||||||| |||| | |||| |||||| ||||||| ||||  |||||| || ||||||||||  ||||||||||      
T  210397 caatcttaagagcatcccacctctcaagttggattcattagaagtacttgacctttcatgttgttgtagtcttgaaagttttccatgtgtggtggatgag 210298  T
Q  166 tttttgggtaaactta 181  Q
    || |||| ||||||||    
T  210297 ttgttggataaactta 210282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 290
Target Start/End: Complemental strand, 200299 - 200220
Alignment:
Q  211 ctcaaaagttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcc 290  Q
    ||||||| | |||||  ||||||||||||||| || |||  | ||||||||||||||||||||| |||||| | ||||||    
T  200299 ctcaaaaatattccagttctcaagttggcttcattggaacaatttgatctttcatattgtgatagtctcgaaaattttcc 200220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 200141 - 200079
Alignment:
Q  228 tctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcc 290  Q
    |||||| ||||||||  |||||| |||  || ||||||||||||||| |||||||||||||||    
T  200141 tctcaatttggcttcactagaagaactcaatttttcatattgtgatagtctcgagagttttcc 200079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 9e-21; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 52 - 331
Target Start/End: Original strand, 617650 - 617929
Alignment:
Q  52 gttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccat 151  Q
    |||| |||||||  ||||||||||||||| ||||||||  |||||| |||||| ||| ||||||| |||||| ||||| |||| |||||||||||||||     
T  617650 gttacaagttgtcacaatctcaggagtattccacctctccagttggattcacttgaaaaacttgacctttcaaattgttataggctcgagagttttccac 617749  T
Q  152 cagtggtggatggatttttgggtaaacttagagtactgagcgtcaaaggttgcaaaaaactcaaaagttttccacctctcaagttggcttctttagaagt 251  Q
      ||||||||||| ||| | || ||||||| |   ||    || | | ||||  | || ||||  ||| | ||||||||||| |||| ||||||||||      
T  617750 ttgtggtggatgggtttcttggaaaacttaaaaccctacttgttacaagttgtcacaatctcaggagtatcccacctctcaatttggattctttagaaaa 617849  T
Q  252 acttgatctttcatattgtgataatctcgagagttttcctcttttggtggatggatttatggataaacttcaattcttga 331  Q
    |||||| ||||||| ||||  || ||| |||||||||||  |  |||||||||| ||  ||||||||||| |||||||||    
T  617850 acttgacctttcatgttgttgtagtcttgagagttttccattggtggtggatgggttgttggataaacttaaattcttga 617929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 58 - 164
Target Start/End: Original strand, 617092 - 617198
Alignment:
Q  58 agttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttccatcagtgg 157  Q
    |||||| |||||||||| ||||| |||||||| ||||||| ||| || ||| || |||| ||||| ||||||| |||||| |||||||||||||  ||||    
T  617092 agttgtggcaatctcagaagtattccacctctcaagttggattcgctagaaaaatttgacctttcttattgtggtagtcttgagagttttccattggtgg 617191  T
Q  158 tggatgg 164  Q
    |||||||    
T  617192 tggatgg 617198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 617509 - 617607
Alignment:
Q  52 gttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    |||| |||||||  ||||||||||||||| |||||||| ||||||| ||  || ||||||||||| |||||| ||||| |||| ||||||| |||||||    
T  617509 gttacaagttgtcacaatctcaggagtattccacctctcaagttggatttgctagaagaacttgacctttcaaattgttataggctcgagaattttcca 617607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 616945 - 617043
Alignment:
Q  52 gttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    ||||||||||||  ||| |||| |||||| |||||||| ||||||| | |||| |||  |||||||||||||| |||| ||||||| || |||||||||    
T  616945 gttaaaagttgtcacaacctcaagagtattccacctctcaagttggatgcactagaaacacttgatctttcatgttgttatagtcttgaaagttttcca 617043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 150
Target Start/End: Original strand, 617241 - 617325
Alignment:
Q  66 caatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    |||||| |||||||| |||||||| ||||||| |||||| |||  | |||| ||||||| |||| ||||||| ||||||||||||    
T  617241 caatcttaggagtattccacctcttaagttggattcactagaaacatttgacctttcatgttgttatagtcttgagagttttcca 617325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 309
Target Start/End: Original strand, 616409 - 616497
Alignment:
Q  221 ttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcctcttttggtggatggattt 309  Q
    |||| |||||||| |||||||| || |||| |||||||||||||  |||| ||| ||| || |||||||||||  ||||| ||||||||    
T  616409 ttccgcctctcaatttggcttcattggaagaacttgatctttcacgttgttatagtctagaaagttttcctctcctggtgaatggattt 616497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 616414 - 616478
Alignment:
Q  85 cctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtctcgagagttttcc 149  Q
    ||||| || ||||||||| ||||||||||||||||||||  |||| ||||||| || ||||||||    
T  616414 cctctcaatttggcttcattggaagaacttgatctttcacgttgttatagtctagaaagttttcc 616478  T

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Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 6)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 181
Target Start/End: Original strand, 73988 - 74132
Alignment:
Q  37 cttaaaattatgagagttaaaagttgtagcaatctcaggagtatcccacctctaaagttggcttcactggaagaacttgatctttcatattgtgatagtc 136  Q
    |||||||| ||||| |||||| |||| | ||| || |||||||| |||||||| | ||| ||||| || |||||||| ||||||||| |||||  | |||    
T  73988 cttaaaatcatgagtgttaaaggttgaatcaagctaaggagtattccacctctcatgttagcttctctagaagaactcgatctttcaaattgtattggtc 74087  T
Q  137 tcgagagttttccatcagtggtggatggatttttgggtaaactta 181  Q
    | ||||||||||||   ||||||||||| ||| | || |||||||    
T  74088 ttgagagttttccactcgtggtggatgggtttcttggaaaactta 74132  T

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Target: scaffold0007; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 290
Target Start/End: Original strand, 70526 - 70599
Alignment:
Q  217 agttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcc 290  Q
    |||||||||| | ||| |||| ||||  ||||| | |||||||||||||||||||||  |||||||||||||||    
T  70526 agttttccacatgtcatgttgccttcactagaaatccttgatctttcatattgtgattctctcgagagttttcc 70599  T

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Target: scaffold0007; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 150
Target Start/End: Original strand, 70562 - 70600
Alignment:
Q  112 cttgatctttcatattgtgatagtctcgagagttttcca 150  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  70562 cttgatctttcatattgtgattctctcgagagttttcca 70600  T

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Target: scaffold0007; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 290
Target Start/End: Original strand, 34694 - 34767
Alignment:
Q  217 agttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcc 290  Q
    |||||||||||| ||| |||| ||||  ||||| | |||||||||||||||||| |   |||||||||||||||    
T  34694 agttttccacctgtcatgttgccttcactagaaatccttgatctttcatattgtaaatctctcgagagttttcc 34767  T

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Target: scaffold0007; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 290
Target Start/End: Original strand, 40007 - 40080
Alignment:
Q  217 agttttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcc 290  Q
    |||||||||||| ||| |||| ||||  ||||| | |||||||||||||||||| |   |||||||||||||||    
T  40007 agttttccacctgtcatgttgccttcactagaaatccttgatctttcatattgtaaatctctcgagagttttcc 40080  T

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Target: scaffold0007; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 305
Target Start/End: Original strand, 74031 - 74115
Alignment:
Q  221 ttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcctcttttggtggatgg 305  Q
    |||||||||||| ||| |||||| |||||| ||| ||||||||| |||||  |  ||| ||||||||||| ||  ||||||||||    
T  74031 ttccacctctcatgttagcttctctagaagaactcgatctttcaaattgtattggtcttgagagttttccactcgtggtggatgg 74115  T

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Target: chr8 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 336
Target Start/End: Original strand, 12591378 - 12591493
Alignment:
Q  221 ttccacctctcaagttggcttctttagaagtacttgatctttcatattgtgataatctcgagagttttcctcttttggtggatggatttatggataaact 320  Q
    |||||||||||||||||| |||  |||||  |||||| |||||| ||||| |||  |||||||||||| |   | ||| |||||| ||  ||||||||||    
T  12591378 ttccacctctcaagttggattcgctagaaaaacttgacctttcaaattgttatatgctcgagagtttttcaagtgtggcggatgggttgttggataaact 12591477  T
Q  321 tcaattcttgagtatt 336  Q
    | ||||||||| ||||    
T  12591478 taaattcttgaatatt 12591493  T

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